HEADER HYDROLASE 20-JUL-16 5LJW TITLE MAMK NON-POLYMERISING A278D MUTANT BOUND TO AMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN-LIKE ATPASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAMK; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRILLUM MAGNETICUM AMB-1; SOURCE 3 ORGANISM_TAXID: 342108; SOURCE 4 GENE: AMB0965; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIAL CYTOSKELETON, FILAMENTOUS PROTEIN, ACTIN-LIKE, KEYWDS 2 MAGNETOSOMES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LOWE REVDAT 3 30-AUG-17 5LJW 1 REMARK REVDAT 2 14-DEC-16 5LJW 1 JRNL REVDAT 1 16-NOV-16 5LJW 0 JRNL AUTH J.LOWE,S.HE,S.H.SCHERES,C.G.SAVVA JRNL TITL X-RAY AND CRYO-EM STRUCTURES OF MONOMERIC AND FILAMENTOUS JRNL TITL 2 ACTIN-LIKE PROTEIN MAMK REVEAL CHANGES ASSOCIATED WITH JRNL TITL 3 POLYMERIZATION. JRNL REF PROC. NATL. ACAD. SCI. V. 113 13396 2016 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 27821762 JRNL DOI 10.1073/PNAS.1612034113 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1810 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.710 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 134653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 6665 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8723 - 5.5896 0.92 4310 198 0.1704 0.2025 REMARK 3 2 5.5896 - 4.4379 0.88 4131 191 0.1497 0.1548 REMARK 3 3 4.4379 - 3.8773 0.83 3928 188 0.1425 0.1498 REMARK 3 4 3.8773 - 3.5229 0.81 3734 212 0.1581 0.1808 REMARK 3 5 3.5229 - 3.2705 0.82 3807 230 0.1759 0.1918 REMARK 3 6 3.2705 - 3.0777 0.81 3764 197 0.1827 0.2145 REMARK 3 7 3.0777 - 2.9236 0.86 3980 222 0.1819 0.2335 REMARK 3 8 2.9236 - 2.7964 0.86 4026 216 0.1783 0.2086 REMARK 3 9 2.7964 - 2.6887 0.87 3998 225 0.1706 0.2071 REMARK 3 10 2.6887 - 2.5960 0.89 4242 189 0.1761 0.2268 REMARK 3 11 2.5960 - 2.5148 0.90 4182 234 0.1726 0.2201 REMARK 3 12 2.5148 - 2.4429 0.91 4247 221 0.1741 0.1967 REMARK 3 13 2.4429 - 2.3786 0.91 4299 199 0.1750 0.2147 REMARK 3 14 2.3786 - 2.3206 0.92 4253 222 0.1739 0.2182 REMARK 3 15 2.3206 - 2.2678 0.92 4296 219 0.1748 0.2474 REMARK 3 16 2.2678 - 2.2196 0.94 4475 205 0.1839 0.2044 REMARK 3 17 2.2196 - 2.1752 0.96 4507 226 0.1871 0.2073 REMARK 3 18 2.1752 - 2.1341 0.94 4430 222 0.1910 0.1938 REMARK 3 19 2.1341 - 2.0960 0.95 4454 230 0.2045 0.2470 REMARK 3 20 2.0960 - 2.0605 0.95 4440 229 0.2024 0.2450 REMARK 3 21 2.0605 - 2.0272 0.95 4390 252 0.2010 0.2050 REMARK 3 22 2.0272 - 1.9961 0.95 4437 247 0.2177 0.2700 REMARK 3 23 1.9961 - 1.9667 0.95 4484 253 0.2164 0.2527 REMARK 3 24 1.9667 - 1.9390 0.96 4512 184 0.2240 0.2700 REMARK 3 25 1.9390 - 1.9128 0.95 4428 261 0.2344 0.2429 REMARK 3 26 1.9128 - 1.8880 0.96 4395 259 0.2531 0.2820 REMARK 3 27 1.8880 - 1.8644 0.95 4469 241 0.2676 0.3181 REMARK 3 28 1.8644 - 1.8419 0.96 4457 233 0.2873 0.3373 REMARK 3 29 1.8419 - 1.8205 0.94 4393 242 0.3085 0.3234 REMARK 3 30 1.8205 - 1.8000 0.96 4520 218 0.3252 0.3413 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5138 REMARK 3 ANGLE : 1.406 6981 REMARK 3 CHIRALITY : 0.055 819 REMARK 3 PLANARITY : 0.007 901 REMARK 3 DIHEDRAL : 13.340 1917 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1200000867. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97941 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 138054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM HEPES PH 7.3, 48 % (W/V) PEG REMARK 280 1000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.90150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 335 REMARK 465 GLN A 336 REMARK 465 TYR A 337 REMARK 465 TRP A 338 REMARK 465 ARG A 339 REMARK 465 GLN A 340 REMARK 465 LEU A 341 REMARK 465 GLY A 342 REMARK 465 ASP A 343 REMARK 465 VAL A 344 REMARK 465 SER A 345 REMARK 465 GLY A 346 REMARK 465 SER A 347 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 GLY B 4 REMARK 465 GLU B 5 REMARK 465 GLY B 6 REMARK 465 GLN B 7 REMARK 465 LEU B 333 REMARK 465 PRO B 334 REMARK 465 PRO B 335 REMARK 465 GLN B 336 REMARK 465 TYR B 337 REMARK 465 TRP B 338 REMARK 465 ARG B 339 REMARK 465 GLN B 340 REMARK 465 LEU B 341 REMARK 465 GLY B 342 REMARK 465 ASP B 343 REMARK 465 VAL B 344 REMARK 465 SER B 345 REMARK 465 GLY B 346 REMARK 465 SER B 347 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 726 O HOH B 758 1.79 REMARK 500 O HOH A 668 O HOH A 700 1.81 REMARK 500 O HOH A 501 O HOH A 648 1.84 REMARK 500 O HOH B 773 O HOH B 777 1.87 REMARK 500 O HOH B 738 O HOH B 739 1.89 REMARK 500 O HOH B 704 O HOH B 728 1.95 REMARK 500 OD2 ASP B 76 O HOH B 501 2.00 REMARK 500 O HOH A 610 O HOH A 713 2.06 REMARK 500 O HOH A 690 O HOH A 732 2.06 REMARK 500 O HOH A 755 O HOH A 757 2.07 REMARK 500 OD2 ASP A 278 O HOH A 501 2.08 REMARK 500 O HOH A 519 O HOH A 577 2.08 REMARK 500 O LEU A 333 O HOH A 502 2.08 REMARK 500 O HOH A 519 O HOH B 696 2.09 REMARK 500 O HOH B 551 O HOH B 736 2.09 REMARK 500 O HOH A 745 O HOH A 747 2.10 REMARK 500 O HOH B 574 O HOH B 731 2.10 REMARK 500 O HOH B 713 O HOH B 771 2.11 REMARK 500 O HOH A 694 O HOH A 721 2.12 REMARK 500 OG1 THR B 175 O HOH B 502 2.13 REMARK 500 O LEU B 48 O HOH B 503 2.15 REMARK 500 O HOH A 719 O HOH A 742 2.15 REMARK 500 OE2 GLU B 331 O HOH B 504 2.15 REMARK 500 O HOH A 645 O HOH A 709 2.17 REMARK 500 O LYS B 49 O HOH B 505 2.17 REMARK 500 OD2 ASP A 84 O HOH A 503 2.18 REMARK 500 N VAL A 211 O HOH A 504 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 323 CB CYS B 323 SG -0.246 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 146 CA - CB - CG ANGL. DEV. = 12.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 56.29 -102.00 REMARK 500 ASP A 76 72.87 -32.35 REMARK 500 VAL A 78 137.39 -33.16 REMARK 500 SER A 80 -72.17 -132.72 REMARK 500 ALA A 188 -150.19 -150.09 REMARK 500 THR B 175 163.25 132.42 REMARK 500 VAL B 176 83.86 73.33 REMARK 500 ALA B 188 -151.19 -152.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 758 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH B 777 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 778 DISTANCE = 6.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP A 402 O1B REMARK 620 2 HOH A 554 O 177.6 REMARK 620 3 HOH A 558 O 85.7 93.7 REMARK 620 4 HOH A 576 O 96.2 86.1 90.5 REMARK 620 5 HOH A 607 O 87.8 92.8 173.5 90.1 REMARK 620 6 HOH A 538 O 90.1 87.5 83.3 170.8 96.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 716 O REMARK 620 2 ANP B 402 O1B 90.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP B 402 DBREF 5LJW A 1 347 UNP Q2W8Q6 Q2W8Q6_MAGSA 1 347 DBREF 5LJW B 1 347 UNP Q2W8Q6 Q2W8Q6_MAGSA 1 347 SEQADV 5LJW VAL A 16 UNP Q2W8Q6 ILE 16 CONFLICT SEQADV 5LJW ASP A 278 UNP Q2W8Q6 ALA 278 ENGINEERED MUTATION SEQADV 5LJW VAL B 16 UNP Q2W8Q6 ILE 16 CONFLICT SEQADV 5LJW ASP B 278 UNP Q2W8Q6 ALA 278 ENGINEERED MUTATION SEQRES 1 A 347 MET SER GLU GLY GLU GLY GLN ALA LYS ASN ARG LEU PHE SEQRES 2 A 347 LEU GLY VAL ASP LEU GLY THR SER HIS THR ALA VAL MET SEQRES 3 A 347 SER SER ARG GLY LYS LYS PHE LEU LEU LYS SER VAL VAL SEQRES 4 A 347 GLY TYR PRO LYS ASP VAL ILE GLY LEU LYS LEU LEU GLY SEQRES 5 A 347 ARG PRO TYR VAL VAL GLY ASP GLU ALA PHE GLU MET ARG SEQRES 6 A 347 SER TYR LEU ASP ILE ARG TYR PRO LEU GLN ASP GLY VAL SEQRES 7 A 347 LEU SER GLU ILE SER ASP ARG ASP ILE GLU VAL ALA ARG SEQRES 8 A 347 HIS LEU LEU THR HIS VAL VAL LYS SER ALA GLU PRO GLY SEQRES 9 A 347 PRO ASN ASP GLU ILE CYS ALA VAL ILE GLY VAL PRO ALA SEQRES 10 A 347 ARG ALA SER ALA ALA ASN LYS ALA LEU LEU LEU LYS MET SEQRES 11 A 347 ALA GLN GLU VAL VAL HIS THR ALA LEU VAL VAL SER GLU SEQRES 12 A 347 PRO PHE MET VAL GLY TYR GLY LEU ASP LYS LEU ILE ASN SEQRES 13 A 347 THR ILE ILE VAL ASP ILE GLY ALA GLY THR THR ASP ILE SEQRES 14 A 347 CYS ALA LEU LYS GLY THR VAL PRO GLY PRO GLU ASP GLN SEQRES 15 A 347 VAL THR LEU THR LYS ALA GLY ASN TYR VAL ASP GLU ARG SEQRES 16 A 347 LEU GLN ASN ALA ILE LEU GLU ARG HIS PRO GLU LEU GLN SEQRES 17 A 347 MET ASN VAL ASN VAL ALA CYS ALA VAL LYS GLU GLN PHE SEQRES 18 A 347 SER PHE VAL GLY THR PRO THR GLU VAL ALA SER PHE GLU SEQRES 19 A 347 PHE ARG ALA ALA GLY LYS PRO VAL ARG ALA ASP VAL THR SEQRES 20 A 347 GLU PRO VAL LYS ILE ALA CYS GLU ALA LEU MET PRO ASP SEQRES 21 A 347 ILE ILE GLU SER ILE GLU THR LEU LEU ARG SER PHE GLN SEQRES 22 A 347 PRO GLU TYR GLN ASP THR VAL LEU GLN ASN ILE VAL PHE SEQRES 23 A 347 ALA GLY GLY GLY SER ARG ILE ARG GLY LEU ALA ALA TYR SEQRES 24 A 347 VAL LYS GLU LYS LEU ARG PRO PHE GLY ASP ALA ASN VAL SEQRES 25 A 347 THR CYS VAL LYS ASP PRO THR PHE ASP GLY CYS ARG GLY SEQRES 26 A 347 ALA LEU ARG LEU ALA GLU GLU LEU PRO PRO GLN TYR TRP SEQRES 27 A 347 ARG GLN LEU GLY ASP VAL SER GLY SER SEQRES 1 B 347 MET SER GLU GLY GLU GLY GLN ALA LYS ASN ARG LEU PHE SEQRES 2 B 347 LEU GLY VAL ASP LEU GLY THR SER HIS THR ALA VAL MET SEQRES 3 B 347 SER SER ARG GLY LYS LYS PHE LEU LEU LYS SER VAL VAL SEQRES 4 B 347 GLY TYR PRO LYS ASP VAL ILE GLY LEU LYS LEU LEU GLY SEQRES 5 B 347 ARG PRO TYR VAL VAL GLY ASP GLU ALA PHE GLU MET ARG SEQRES 6 B 347 SER TYR LEU ASP ILE ARG TYR PRO LEU GLN ASP GLY VAL SEQRES 7 B 347 LEU SER GLU ILE SER ASP ARG ASP ILE GLU VAL ALA ARG SEQRES 8 B 347 HIS LEU LEU THR HIS VAL VAL LYS SER ALA GLU PRO GLY SEQRES 9 B 347 PRO ASN ASP GLU ILE CYS ALA VAL ILE GLY VAL PRO ALA SEQRES 10 B 347 ARG ALA SER ALA ALA ASN LYS ALA LEU LEU LEU LYS MET SEQRES 11 B 347 ALA GLN GLU VAL VAL HIS THR ALA LEU VAL VAL SER GLU SEQRES 12 B 347 PRO PHE MET VAL GLY TYR GLY LEU ASP LYS LEU ILE ASN SEQRES 13 B 347 THR ILE ILE VAL ASP ILE GLY ALA GLY THR THR ASP ILE SEQRES 14 B 347 CYS ALA LEU LYS GLY THR VAL PRO GLY PRO GLU ASP GLN SEQRES 15 B 347 VAL THR LEU THR LYS ALA GLY ASN TYR VAL ASP GLU ARG SEQRES 16 B 347 LEU GLN ASN ALA ILE LEU GLU ARG HIS PRO GLU LEU GLN SEQRES 17 B 347 MET ASN VAL ASN VAL ALA CYS ALA VAL LYS GLU GLN PHE SEQRES 18 B 347 SER PHE VAL GLY THR PRO THR GLU VAL ALA SER PHE GLU SEQRES 19 B 347 PHE ARG ALA ALA GLY LYS PRO VAL ARG ALA ASP VAL THR SEQRES 20 B 347 GLU PRO VAL LYS ILE ALA CYS GLU ALA LEU MET PRO ASP SEQRES 21 B 347 ILE ILE GLU SER ILE GLU THR LEU LEU ARG SER PHE GLN SEQRES 22 B 347 PRO GLU TYR GLN ASP THR VAL LEU GLN ASN ILE VAL PHE SEQRES 23 B 347 ALA GLY GLY GLY SER ARG ILE ARG GLY LEU ALA ALA TYR SEQRES 24 B 347 VAL LYS GLU LYS LEU ARG PRO PHE GLY ASP ALA ASN VAL SEQRES 25 B 347 THR CYS VAL LYS ASP PRO THR PHE ASP GLY CYS ARG GLY SEQRES 26 B 347 ALA LEU ARG LEU ALA GLU GLU LEU PRO PRO GLN TYR TRP SEQRES 27 B 347 ARG GLN LEU GLY ASP VAL SER GLY SER HET MG A 401 1 HET ANP A 402 31 HET MG B 401 1 HET ANP B 402 31 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 3 MG 2(MG 2+) FORMUL 4 ANP 2(C10 H17 N6 O12 P3) FORMUL 7 HOH *536(H2 O) HELIX 1 AA1 GLY A 4 ASN A 10 1 7 HELIX 2 AA2 ASP A 44 GLY A 52 1 9 HELIX 3 AA3 GLY A 58 MET A 64 1 7 HELIX 4 AA4 SER A 83 ALA A 101 1 19 HELIX 5 AA5 SER A 120 GLN A 132 1 13 HELIX 6 AA6 GLU A 143 LEU A 151 1 9 HELIX 7 AA7 GLY A 178 GLU A 180 5 3 HELIX 8 AA8 ALA A 188 HIS A 204 1 17 HELIX 9 AA9 ASN A 210 SER A 222 1 13 HELIX 10 AB1 VAL A 246 ALA A 256 1 11 HELIX 11 AB2 LEU A 257 ARG A 270 1 14 HELIX 12 AB3 SER A 271 PHE A 272 5 2 HELIX 13 AB4 GLN A 273 GLU A 275 5 3 HELIX 14 AB5 TYR A 276 LEU A 281 1 6 HELIX 15 AB6 GLY A 288 ILE A 293 5 6 HELIX 16 AB7 GLY A 295 LEU A 304 1 10 HELIX 17 AB8 PHE A 320 LEU A 333 1 14 HELIX 18 AB9 ASP B 44 GLY B 52 1 9 HELIX 19 AC1 GLY B 58 MET B 64 1 7 HELIX 20 AC2 SER B 83 ALA B 101 1 19 HELIX 21 AC3 SER B 120 GLN B 132 1 13 HELIX 22 AC4 GLU B 143 LEU B 151 1 9 HELIX 23 AC5 GLY B 178 GLU B 180 5 3 HELIX 24 AC6 ALA B 188 HIS B 204 1 17 HELIX 25 AC7 ASN B 210 SER B 222 1 13 HELIX 26 AC8 VAL B 246 ALA B 256 1 11 HELIX 27 AC9 LEU B 257 SER B 271 1 15 HELIX 28 AD1 GLN B 273 GLU B 275 5 3 HELIX 29 AD2 TYR B 276 LEU B 281 1 6 HELIX 30 AD3 GLY B 288 ILE B 293 5 6 HELIX 31 AD4 GLY B 295 LEU B 304 1 10 HELIX 32 AD5 PHE B 320 GLU B 332 1 13 SHEET 1 AA1 5 LYS A 32 LYS A 36 0 SHEET 2 AA1 5 HIS A 22 SER A 27 -1 N THR A 23 O LEU A 35 SHEET 3 AA1 5 ARG A 11 LEU A 18 -1 N ASP A 17 O ALA A 24 SHEET 4 AA1 5 GLU A 108 VAL A 115 1 O GLY A 114 N VAL A 16 SHEET 5 AA1 5 THR A 137 SER A 142 1 O LEU A 139 N ILE A 113 SHEET 1 AA2 3 VAL A 56 VAL A 57 0 SHEET 2 AA2 3 VAL A 39 PRO A 42 -1 N GLY A 40 O VAL A 56 SHEET 3 AA2 3 LEU A 68 ARG A 71 -1 O ARG A 71 N VAL A 39 SHEET 1 AA3 5 GLN A 182 LEU A 185 0 SHEET 2 AA3 5 THR A 167 LEU A 172 -1 N ILE A 169 O VAL A 183 SHEET 3 AA3 5 THR A 157 ILE A 162 -1 N THR A 157 O LEU A 172 SHEET 4 AA3 5 ILE A 284 ALA A 287 1 O VAL A 285 N VAL A 160 SHEET 5 AA3 5 VAL A 312 CYS A 314 1 O THR A 313 N PHE A 286 SHEET 1 AA4 2 SER A 232 ALA A 237 0 SHEET 2 AA4 2 LYS A 240 ASP A 245 -1 O VAL A 242 N PHE A 235 SHEET 1 AA5 5 LYS B 32 LYS B 36 0 SHEET 2 AA5 5 HIS B 22 SER B 27 -1 N THR B 23 O LEU B 35 SHEET 3 AA5 5 ASN B 10 LEU B 18 -1 N ASP B 17 O ALA B 24 SHEET 4 AA5 5 ASP B 107 VAL B 115 1 O GLY B 114 N VAL B 16 SHEET 5 AA5 5 THR B 137 SER B 142 1 O LEU B 139 N ILE B 113 SHEET 1 AA6 3 VAL B 56 VAL B 57 0 SHEET 2 AA6 3 VAL B 39 PRO B 42 -1 N GLY B 40 O VAL B 56 SHEET 3 AA6 3 LEU B 68 ARG B 71 -1 O ARG B 71 N VAL B 39 SHEET 1 AA7 5 GLN B 182 LEU B 185 0 SHEET 2 AA7 5 THR B 167 LEU B 172 -1 N ILE B 169 O VAL B 183 SHEET 3 AA7 5 THR B 157 ILE B 162 -1 N THR B 157 O LEU B 172 SHEET 4 AA7 5 ILE B 284 ALA B 287 1 O VAL B 285 N VAL B 160 SHEET 5 AA7 5 VAL B 312 CYS B 314 1 O THR B 313 N PHE B 286 SHEET 1 AA8 2 SER B 232 ALA B 237 0 SHEET 2 AA8 2 LYS B 240 ASP B 245 -1 O VAL B 242 N PHE B 235 LINK MG MG A 401 O1B ANP A 402 1555 1555 1.94 LINK MG MG A 401 O HOH A 554 1555 1555 2.13 LINK MG MG A 401 O HOH A 558 1555 1555 2.14 LINK MG MG A 401 O HOH A 576 1555 1555 2.04 LINK MG MG A 401 O HOH A 607 1555 1555 2.08 LINK MG MG A 401 O HOH A 538 1555 1555 2.18 LINK MG MG B 401 O HOH B 716 1555 1555 2.69 LINK MG MG B 401 O1B ANP B 402 1555 1555 1.84 CISPEP 1 GLY A 77 VAL A 78 0 -16.12 CISPEP 2 LEU A 79 SER A 80 0 9.31 SITE 1 AC1 6 ANP A 402 HOH A 538 HOH A 554 HOH A 558 SITE 2 AC1 6 HOH A 576 HOH A 607 SITE 1 AC2 32 THR A 20 SER A 21 ASP A 76 GLY A 163 SITE 2 AC2 32 ALA A 164 GLY A 165 THR A 166 GLY A 189 SITE 3 AC2 32 CYS A 215 LYS A 218 GLU A 219 SER A 222 SITE 4 AC2 32 GLY A 288 GLY A 289 GLY A 290 ARG A 292 SITE 5 AC2 32 MG A 401 HOH A 515 HOH A 538 HOH A 552 SITE 6 AC2 32 HOH A 558 HOH A 559 HOH A 576 HOH A 602 SITE 7 AC2 32 HOH A 607 HOH A 610 HOH A 620 HOH A 626 SITE 8 AC2 32 HOH A 633 HOH A 637 HOH A 681 HOH A 692 SITE 1 AC3 2 ANP B 402 HOH B 716 SITE 1 AC4 20 GLY B 163 ALA B 164 GLY B 165 THR B 166 SITE 2 AC4 20 GLY B 189 CYS B 215 LYS B 218 GLU B 219 SITE 3 AC4 20 SER B 222 GLY B 288 GLY B 289 GLY B 290 SITE 4 AC4 20 ARG B 292 ILE B 293 MG B 401 HOH B 520 SITE 5 AC4 20 HOH B 551 HOH B 557 HOH B 577 HOH B 608 CRYST1 72.572 71.803 79.761 90.00 98.41 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013779 0.000000 0.002038 0.00000 SCALE2 0.000000 0.013927 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012674 0.00000