HEADER RNA BINDING PROTEIN 29-JUL-16 5LM5 TITLE STRUCTURE OF C-TERMINAL DOMAIN FROM S. CEREVISIAE PAT1 DECAPPING TITLE 2 ACTIVATOR BOUND TO DCP2 HLM2 PEPTIDE (REGION 435-451) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DECAPPING ACTIVATOR AND TRANSLATIONAL REPRESSOR PAT1, COMPND 5 TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1,MRNA TURNOVER PROTEIN 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: MRNA DECAPPING PROTEIN 2; COMPND 10 CHAIN: C, D; COMPND 11 FRAGMENT: UNP RESIDUES 436-449; COMPND 12 SYNONYM: DCP2 DECAPPING FACTOR; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: PAT1, MRT1, YCR077C, YCR77C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 4932 KEYWDS PROTEIN PEPTIDE COMPLEX, ISOMERASE, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CHARENTON,C.GAUDON-PLESSE,Z.FOURATI,V.TAVERNITI,R.BACK, AUTHOR 2 O.KOLESNIKOVA,B.SERAPHIN,M.GRAILLE REVDAT 6 10-JAN-24 5LM5 1 REMARK REVDAT 5 26-SEP-18 5LM5 1 TITLE REVDAT 4 15-NOV-17 5LM5 1 JRNL REVDAT 3 08-NOV-17 5LM5 1 JRNL REVDAT 2 01-NOV-17 5LM5 1 JRNL REVDAT 1 16-AUG-17 5LM5 0 JRNL AUTH C.CHARENTON,C.GAUDON-PLESSE,Z.FOURATI,V.TAVERNITI,R.BACK, JRNL AUTH 2 O.KOLESNIKOVA,B.SERAPHIN,M.GRAILLE JRNL TITL A UNIQUE SURFACE ON PAT1 C-TERMINAL DOMAIN DIRECTLY JRNL TITL 2 INTERACTS WITH DCP2 DECAPPING ENZYME AND XRN1 5'-3' MRNA JRNL TITL 3 EXONUCLEASE IN YEAST. JRNL REF PROC. NATL. ACAD. SCI. V. 114 E9493 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29078363 JRNL DOI 10.1073/PNAS.1711680114 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 21633 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.256 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 1126 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.73 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.81 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2825 REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2685 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.96 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 140 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5339 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 108.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 19.44340 REMARK 3 B22 (A**2) : -39.55370 REMARK 3 B33 (A**2) : 20.11030 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 1.030 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 1.725 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.336 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 2.926 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.347 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5418 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7301 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2003 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 163 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 733 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5418 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 744 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6366 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.12 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.20 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.57 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 12.6665 24.6910 23.1010 REMARK 3 T TENSOR REMARK 3 T11: -0.4275 T22: 0.6079 REMARK 3 T33: -0.4281 T12: 0.0385 REMARK 3 T13: 0.0034 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 4.0084 L22: 0.8378 REMARK 3 L33: 1.9834 L12: -0.0108 REMARK 3 L13: -0.0201 L23: 0.6563 REMARK 3 S TENSOR REMARK 3 S11: -0.0799 S12: 0.2861 S13: -0.1670 REMARK 3 S21: -0.0375 S22: 0.0125 S23: 0.1103 REMARK 3 S31: 0.0015 S32: -0.0121 S33: 0.0675 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 26.5357 30.6379 8.6834 REMARK 3 T TENSOR REMARK 3 T11: -0.4998 T22: 0.6079 REMARK 3 T33: -0.6024 T12: -0.0168 REMARK 3 T13: -0.0282 T23: 0.0508 REMARK 3 L TENSOR REMARK 3 L11: 4.0032 L22: 0.5303 REMARK 3 L33: 2.6736 L12: -0.3944 REMARK 3 L13: -0.1945 L23: 0.3973 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: 1.0420 S13: 0.0855 REMARK 3 S21: -0.1617 S22: 0.0218 S23: -0.0919 REMARK 3 S31: -0.2819 S32: 0.1873 S33: -0.0192 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LM5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1200000978. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97533 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21634 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.39100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, MOLREP REMARK 200 STARTING MODEL: 4OGP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2 20%PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 297.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.14000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.98000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.00500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.14000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.98000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.00500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.14000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.98000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.00500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.14000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.98000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.00500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 428 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 SER A 435 REMARK 465 SER A 436 REMARK 465 GLY A 437 REMARK 465 SER A 438 REMARK 465 SER A 439 REMARK 465 SER A 440 REMARK 465 THR A 441 REMARK 465 GLY A 442 REMARK 465 SER A 443 REMARK 465 SER A 444 REMARK 465 ALA A 445 REMARK 465 ALA A 446 REMARK 465 ALA A 447 REMARK 465 VAL A 448 REMARK 465 ALA A 449 REMARK 465 SER A 450 REMARK 465 LYS A 451 REMARK 465 GLN A 452 REMARK 465 ARG A 453 REMARK 465 ARG A 454 REMARK 465 ARG A 455 REMARK 465 SER A 456 REMARK 465 SER A 457 REMARK 465 TYR A 458 REMARK 465 ALA A 459 REMARK 465 PHE A 460 REMARK 465 ASN A 461 REMARK 465 ASN A 462 REMARK 465 GLY A 463 REMARK 465 ASN A 464 REMARK 465 GLY A 465 REMARK 465 ALA A 466 REMARK 465 THR A 467 REMARK 465 LYS A 645 REMARK 465 GLN A 646 REMARK 465 ASP A 647 REMARK 465 SER A 648 REMARK 465 SER A 649 REMARK 465 ARG A 650 REMARK 465 SER A 651 REMARK 465 ASN A 652 REMARK 465 ILE A 653 REMARK 465 LEU A 654 REMARK 465 SER A 655 REMARK 465 SER A 656 REMARK 465 PRO A 657 REMARK 465 LYS A 796 REMARK 465 MET B 428 REMARK 465 HIS B 429 REMARK 465 HIS B 430 REMARK 465 HIS B 431 REMARK 465 HIS B 432 REMARK 465 HIS B 433 REMARK 465 HIS B 434 REMARK 465 SER B 435 REMARK 465 SER B 436 REMARK 465 GLY B 437 REMARK 465 SER B 438 REMARK 465 SER B 439 REMARK 465 SER B 440 REMARK 465 THR B 441 REMARK 465 GLY B 442 REMARK 465 SER B 443 REMARK 465 SER B 444 REMARK 465 ALA B 445 REMARK 465 ALA B 446 REMARK 465 ALA B 447 REMARK 465 VAL B 448 REMARK 465 ALA B 449 REMARK 465 SER B 450 REMARK 465 LYS B 451 REMARK 465 GLN B 452 REMARK 465 ARG B 453 REMARK 465 ARG B 454 REMARK 465 ARG B 455 REMARK 465 SER B 456 REMARK 465 SER B 457 REMARK 465 TYR B 458 REMARK 465 ALA B 459 REMARK 465 PHE B 460 REMARK 465 ASN B 461 REMARK 465 ASN B 462 REMARK 465 GLY B 463 REMARK 465 ASN B 464 REMARK 465 GLY B 465 REMARK 465 ALA B 466 REMARK 465 THR B 467 REMARK 465 ASN B 601 REMARK 465 ASN B 602 REMARK 465 SER B 603 REMARK 465 SER B 648 REMARK 465 SER B 649 REMARK 465 ARG B 650 REMARK 465 SER B 651 REMARK 465 ASN B 652 REMARK 465 ILE B 653 REMARK 465 LEU B 654 REMARK 465 SER B 655 REMARK 465 SER B 656 REMARK 465 PRO B 657 REMARK 465 GLU B 658 REMARK 465 SER D 437 REMARK 465 LYS D 450 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 675 -0.69 75.13 REMARK 500 ASN B 521 135.02 -36.49 REMARK 500 GLN B 753 78.34 -108.40 REMARK 500 ASN D 448 69.84 -113.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 5LM5 A 435 796 UNP P25644 PAT1_YEAST 435 796 DBREF 5LM5 B 435 796 UNP P25644 PAT1_YEAST 435 796 DBREF 5LM5 C 437 450 UNP B3LNX5 B3LNX5_YEAS1 436 449 DBREF 5LM5 D 437 450 UNP B3LNX5 B3LNX5_YEAS1 436 449 SEQADV 5LM5 MET A 428 UNP P25644 INITIATING METHIONINE SEQADV 5LM5 HIS A 429 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS A 430 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS A 431 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS A 432 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS A 433 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS A 434 UNP P25644 EXPRESSION TAG SEQADV 5LM5 ALA A 706 UNP P25644 GLN 706 ENGINEERED MUTATION SEQADV 5LM5 ALA A 713 UNP P25644 LEU 713 ENGINEERED MUTATION SEQADV 5LM5 MET B 428 UNP P25644 INITIATING METHIONINE SEQADV 5LM5 HIS B 429 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS B 430 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS B 431 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS B 432 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS B 433 UNP P25644 EXPRESSION TAG SEQADV 5LM5 HIS B 434 UNP P25644 EXPRESSION TAG SEQADV 5LM5 ALA B 706 UNP P25644 GLN 706 ENGINEERED MUTATION SEQADV 5LM5 ALA B 713 UNP P25644 LEU 713 ENGINEERED MUTATION SEQRES 1 A 369 MET HIS HIS HIS HIS HIS HIS SER SER GLY SER SER SER SEQRES 2 A 369 THR GLY SER SER ALA ALA ALA VAL ALA SER LYS GLN ARG SEQRES 3 A 369 ARG ARG SER SER TYR ALA PHE ASN ASN GLY ASN GLY ALA SEQRES 4 A 369 THR ASN LEU ASN LYS SER GLY GLY LYS LYS PHE ILE LEU SEQRES 5 A 369 GLU LEU ILE GLU THR VAL TYR GLU GLU ILE LEU ASP LEU SEQRES 6 A 369 GLU ALA ASN LEU ARG ASN GLY GLN GLN THR ASP SER THR SEQRES 7 A 369 ALA MET TRP GLU ALA LEU HIS ILE ASP ASP SER SER TYR SEQRES 8 A 369 ASP VAL ASN PRO PHE ILE SER MET LEU SER PHE ASP LYS SEQRES 9 A 369 GLY ILE LYS ILE MET PRO ARG ILE PHE ASN PHE LEU ASP SEQRES 10 A 369 LYS GLN GLN LYS LEU LYS ILE LEU GLN LYS ILE PHE ASN SEQRES 11 A 369 GLU LEU SER HIS LEU GLN ILE ILE ILE LEU SER SER TYR SEQRES 12 A 369 LYS THR THR PRO LYS PRO THR LEU THR GLN LEU LYS LYS SEQRES 13 A 369 VAL ASP LEU PHE GLN MET ILE ILE LEU LYS ILE ILE VAL SEQRES 14 A 369 SER PHE LEU SER ASN ASN SER ASN PHE ILE GLU ILE MET SEQRES 15 A 369 GLY LEU LEU LEU GLN LEU ILE ARG ASN ASN ASN VAL SER SEQRES 16 A 369 PHE LEU THR THR SER LYS ILE GLY LEU ASN LEU ILE THR SEQRES 17 A 369 ILE LEU ILE SER ARG ALA ALA LEU ILE LYS GLN ASP SER SEQRES 18 A 369 SER ARG SER ASN ILE LEU SER SER PRO GLU ILE SER THR SEQRES 19 A 369 TRP ASN GLU ILE TYR ASP LYS LEU PHE THR SER LEU GLU SEQRES 20 A 369 SER LYS ILE GLN LEU ILE PHE PRO PRO ARG GLU TYR ASN SEQRES 21 A 369 ASP HIS ILE MET ARG LEU GLN ASN ASP LYS PHE MET ASP SEQRES 22 A 369 GLU ALA TYR ILE TRP ALA PHE LEU ALA SER LEU ALA ALA SEQRES 23 A 369 SER GLY LYS LEU ASN HIS GLN ARG ILE ILE ILE ASP GLU SEQRES 24 A 369 VAL ARG ASP GLU ILE PHE ALA THR ILE ASN GLU ALA GLU SEQRES 25 A 369 THR LEU GLN LYS LYS GLU LYS GLU LEU SER VAL LEU PRO SEQRES 26 A 369 GLN ARG SER GLN GLU LEU ASP THR GLU LEU LYS SER ILE SEQRES 27 A 369 ILE TYR ASN LYS GLU LYS LEU TYR GLN ASP LEU ASN LEU SEQRES 28 A 369 PHE LEU ASN VAL MET GLY LEU VAL TYR ARG ASP GLY GLU SEQRES 29 A 369 ILE SER GLU LEU LYS SEQRES 1 B 369 MET HIS HIS HIS HIS HIS HIS SER SER GLY SER SER SER SEQRES 2 B 369 THR GLY SER SER ALA ALA ALA VAL ALA SER LYS GLN ARG SEQRES 3 B 369 ARG ARG SER SER TYR ALA PHE ASN ASN GLY ASN GLY ALA SEQRES 4 B 369 THR ASN LEU ASN LYS SER GLY GLY LYS LYS PHE ILE LEU SEQRES 5 B 369 GLU LEU ILE GLU THR VAL TYR GLU GLU ILE LEU ASP LEU SEQRES 6 B 369 GLU ALA ASN LEU ARG ASN GLY GLN GLN THR ASP SER THR SEQRES 7 B 369 ALA MET TRP GLU ALA LEU HIS ILE ASP ASP SER SER TYR SEQRES 8 B 369 ASP VAL ASN PRO PHE ILE SER MET LEU SER PHE ASP LYS SEQRES 9 B 369 GLY ILE LYS ILE MET PRO ARG ILE PHE ASN PHE LEU ASP SEQRES 10 B 369 LYS GLN GLN LYS LEU LYS ILE LEU GLN LYS ILE PHE ASN SEQRES 11 B 369 GLU LEU SER HIS LEU GLN ILE ILE ILE LEU SER SER TYR SEQRES 12 B 369 LYS THR THR PRO LYS PRO THR LEU THR GLN LEU LYS LYS SEQRES 13 B 369 VAL ASP LEU PHE GLN MET ILE ILE LEU LYS ILE ILE VAL SEQRES 14 B 369 SER PHE LEU SER ASN ASN SER ASN PHE ILE GLU ILE MET SEQRES 15 B 369 GLY LEU LEU LEU GLN LEU ILE ARG ASN ASN ASN VAL SER SEQRES 16 B 369 PHE LEU THR THR SER LYS ILE GLY LEU ASN LEU ILE THR SEQRES 17 B 369 ILE LEU ILE SER ARG ALA ALA LEU ILE LYS GLN ASP SER SEQRES 18 B 369 SER ARG SER ASN ILE LEU SER SER PRO GLU ILE SER THR SEQRES 19 B 369 TRP ASN GLU ILE TYR ASP LYS LEU PHE THR SER LEU GLU SEQRES 20 B 369 SER LYS ILE GLN LEU ILE PHE PRO PRO ARG GLU TYR ASN SEQRES 21 B 369 ASP HIS ILE MET ARG LEU GLN ASN ASP LYS PHE MET ASP SEQRES 22 B 369 GLU ALA TYR ILE TRP ALA PHE LEU ALA SER LEU ALA ALA SEQRES 23 B 369 SER GLY LYS LEU ASN HIS GLN ARG ILE ILE ILE ASP GLU SEQRES 24 B 369 VAL ARG ASP GLU ILE PHE ALA THR ILE ASN GLU ALA GLU SEQRES 25 B 369 THR LEU GLN LYS LYS GLU LYS GLU LEU SER VAL LEU PRO SEQRES 26 B 369 GLN ARG SER GLN GLU LEU ASP THR GLU LEU LYS SER ILE SEQRES 27 B 369 ILE TYR ASN LYS GLU LYS LEU TYR GLN ASP LEU ASN LEU SEQRES 28 B 369 PHE LEU ASN VAL MET GLY LEU VAL TYR ARG ASP GLY GLU SEQRES 29 B 369 ILE SER GLU LEU LYS SEQRES 1 C 14 SER SER SER PRO GLY GLN LEU LEU ASP ILE LEU ASN SER SEQRES 2 C 14 LYS SEQRES 1 D 14 SER SER SER PRO GLY GLN LEU LEU ASP ILE LEU ASN SER SEQRES 2 D 14 LYS HELIX 1 AA1 ASN A 468 GLY A 473 5 6 HELIX 2 AA2 GLY A 474 ASN A 498 1 25 HELIX 3 AA3 SER A 504 ALA A 510 1 7 HELIX 4 AA4 ASN A 521 LEU A 527 1 7 HELIX 5 AA5 PHE A 529 PHE A 542 1 14 HELIX 6 AA6 ASP A 544 GLU A 558 1 15 HELIX 7 AA7 LEU A 559 HIS A 561 5 3 HELIX 8 AA8 LEU A 562 SER A 569 1 8 HELIX 9 AA9 THR A 577 ASN A 602 1 26 HELIX 10 AB1 ASN A 604 ASN A 619 1 16 HELIX 11 AB2 ASN A 620 THR A 625 1 6 HELIX 12 AB3 SER A 627 ILE A 644 1 18 HELIX 13 AB4 ILE A 659 GLU A 674 1 16 HELIX 14 AB5 LYS A 676 PHE A 681 5 6 HELIX 15 AB6 PRO A 683 ASN A 695 1 13 HELIX 16 AB7 GLU A 701 SER A 714 1 14 HELIX 17 AB8 LYS A 716 VAL A 750 1 35 HELIX 18 AB9 SER A 755 MET A 783 1 29 HELIX 19 AC1 ASN B 468 GLY B 473 5 6 HELIX 20 AC2 GLY B 474 ASN B 498 1 25 HELIX 21 AC3 SER B 504 LEU B 511 1 8 HELIX 22 AC4 ASN B 521 LEU B 527 1 7 HELIX 23 AC5 PHE B 529 ILE B 535 1 7 HELIX 24 AC6 ILE B 535 PHE B 542 1 8 HELIX 25 AC7 ASP B 544 GLU B 558 1 15 HELIX 26 AC8 LEU B 559 HIS B 561 5 3 HELIX 27 AC9 LEU B 562 SER B 569 1 8 HELIX 28 AD1 THR B 577 SER B 600 1 24 HELIX 29 AD2 PHE B 605 ASN B 619 1 15 HELIX 30 AD3 ASN B 620 THR B 626 1 7 HELIX 31 AD4 SER B 627 ASP B 647 1 21 HELIX 32 AD5 SER B 660 GLU B 674 1 15 HELIX 33 AD6 LYS B 676 PHE B 681 5 6 HELIX 34 AD7 PRO B 683 ASN B 695 1 13 HELIX 35 AD8 GLU B 701 GLY B 715 1 15 HELIX 36 AD9 LYS B 716 VAL B 727 1 12 HELIX 37 AE1 VAL B 727 VAL B 750 1 24 HELIX 38 AE2 SER B 755 MET B 783 1 29 HELIX 39 AE3 SER C 439 LYS C 450 1 12 HELIX 40 AE4 SER D 439 ASN D 448 1 10 SHEET 1 AA1 2 LEU A 785 ARG A 788 0 SHEET 2 AA1 2 GLU A 791 GLU A 794 -1 O SER A 793 N VAL A 786 SHEET 1 AA2 2 LEU B 785 ARG B 788 0 SHEET 2 AA2 2 GLU B 791 GLU B 794 -1 O SER B 793 N VAL B 786 CRYST1 98.280 115.960 122.010 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010175 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008624 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008196 0.00000