HEADER CELL ADHESION 04-AUG-16 5LNE TITLE E. COLI F9 PILUS ADHESIN FMLH BOUND TO THE THOMSEN-FRIEDENREICH (TF) TITLE 2 ANTIGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FML FIMBRIAL ADHESIN FMLD; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 25-182; COMPND 5 SYNONYM: FMLH; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FMLD, UTI89_C1716; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS FIMBRIAL ADHESIN, LECTIN, O-GLYCAN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR S.RUER,M.S.CONOVER,V.KALAS,J.TAGANNA,H.DE GREVE,J.S.PINKNER, AUTHOR 2 K.W.DODSON,S.J.HULTGREN,H.REMAUT REVDAT 4 29-JUL-20 5LNE 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 31-JAN-18 5LNE 1 REMARK REVDAT 2 26-OCT-16 5LNE 1 JRNL REVDAT 1 05-OCT-16 5LNE 0 JRNL AUTH M.S.CONOVER,S.RUER,J.TAGANNA,V.KALAS,H.DE GREVE,J.S.PINKNER, JRNL AUTH 2 K.W.DODSON,H.REMAUT,S.J.HULTGREN JRNL TITL INFLAMMATION-INDUCED ADHESIN-RECEPTOR INTERACTION PROVIDES A JRNL TITL 2 FITNESS ADVANTAGE TO UROPATHOGENIC E. COLI DURING CHRONIC JRNL TITL 3 INFECTION. JRNL REF CELL HOST MICROBE V. 20 482 2016 JRNL REFN ESSN 1934-6069 JRNL PMID 27667696 JRNL DOI 10.1016/J.CHOM.2016.08.013 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 16407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 877 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.21 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1209 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2412 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.258 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.144 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.792 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2534 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2328 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3466 ; 2.022 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5354 ; 1.478 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 308 ; 7.241 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 104 ;42.395 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 360 ;13.886 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 1.986 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 402 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2838 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 584 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1250 ; 2.195 ; 3.059 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1249 ; 2.194 ; 3.057 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1552 ; 3.429 ; 4.559 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1553 ; 3.428 ; 4.560 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1284 ; 2.896 ; 3.361 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1284 ; 2.896 ; 3.361 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1915 ; 4.536 ; 4.927 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2567 ; 6.352 ;24.551 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2559 ; 6.326 ;24.530 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 156 B 1 156 16436 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): -14.4275 -21.4157 15.2337 REMARK 3 T TENSOR REMARK 3 T11: 0.0864 T22: 0.0122 REMARK 3 T33: 0.0017 T12: -0.0037 REMARK 3 T13: 0.0048 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.5531 L22: 0.1345 REMARK 3 L33: 0.3477 L12: 0.0790 REMARK 3 L13: 0.1576 L23: 0.0851 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: 0.0818 S13: 0.0033 REMARK 3 S21: 0.0264 S22: 0.0148 S23: 0.0133 REMARK 3 S31: 0.0060 S32: 0.0243 S33: -0.0018 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 202 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9263 -45.8293 27.5796 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.0064 REMARK 3 T33: 0.0091 T12: -0.0035 REMARK 3 T13: -0.0007 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.2216 L22: 0.0253 REMARK 3 L33: 0.2404 L12: -0.0365 REMARK 3 L13: 0.0334 L23: -0.0720 REMARK 3 S TENSOR REMARK 3 S11: -0.0030 S12: -0.0120 S13: 0.0296 REMARK 3 S21: -0.0037 S22: 0.0083 S23: -0.0017 REMARK 3 S31: -0.0087 S32: -0.0267 S33: -0.0054 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5LNE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1200001049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97631 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17285 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 59.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PH2, 2.2M AMMONIUM REMARK 280 SULFATE, 20% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 59.41000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.73000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 59.41000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.73000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 66 REMARK 465 GLY A 112 REMARK 465 ALA A 113 REMARK 465 ALA A 114 REMARK 465 GLY A 115 REMARK 465 THR A 158 REMARK 465 HIS A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 GLY B 65 REMARK 465 ALA B 114 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 17 CB SER B 17 OG -0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 93 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 127 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 13 172.88 178.30 REMARK 500 GLN A 59 124.92 -34.16 REMARK 500 ALA A 134 -153.56 -103.59 REMARK 500 ASN A 140 65.06 36.66 REMARK 500 GLN B 59 126.03 -33.04 REMARK 500 ASN B 78 2.64 89.41 REMARK 500 ALA B 134 -157.07 -102.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 5LNE A 1 158 UNP Q1RBS0 Q1RBS0_ECOUT 25 182 DBREF 5LNE B 1 158 UNP Q1RBS0 Q1RBS0_ECOUT 25 182 SEQADV 5LNE HIS A 159 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS A 160 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS A 161 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS A 162 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS A 163 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS A 164 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS B 159 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS B 160 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS B 161 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS B 162 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS B 163 UNP Q1RBS0 EXPRESSION TAG SEQADV 5LNE HIS B 164 UNP Q1RBS0 EXPRESSION TAG SEQRES 1 A 164 PHE SER CYS ASN VAL ASP GLY GLY SER SER ILE GLY ALA SEQRES 2 A 164 GLY THR THR SER VAL TYR VAL ASN LEU ASP PRO VAL ILE SEQRES 3 A 164 GLN PRO GLY GLN ASN LEU VAL VAL ASP LEU SER GLN HIS SEQRES 4 A 164 ILE SER CYS TRP ASN ASP TYR GLY GLY TRP TYR ASP THR SEQRES 5 A 164 ASP HIS ILE ASN LEU VAL GLN GLY SER ALA PHE ALA GLY SEQRES 6 A 164 SER LEU GLN SER TYR LYS GLY SER LEU TYR TRP ASN ASN SEQRES 7 A 164 VAL THR TYR PRO PHE PRO LEU THR THR ASN THR ASN VAL SEQRES 8 A 164 LEU ASP ILE GLY ASP LYS THR PRO MET PRO LEU PRO LEU SEQRES 9 A 164 LYS LEU TYR ILE THR PRO VAL GLY ALA ALA GLY GLY VAL SEQRES 10 A 164 VAL ILE LYS ALA GLY GLU VAL ILE ALA ARG ILE HIS MET SEQRES 11 A 164 TYR LYS ILE ALA THR LEU GLY SER GLY ASN PRO ARG ASN SEQRES 12 A 164 PHE THR TRP ASN ILE ILE SER ASN ASN SER VAL VAL MET SEQRES 13 A 164 PRO THR HIS HIS HIS HIS HIS HIS SEQRES 1 B 164 PHE SER CYS ASN VAL ASP GLY GLY SER SER ILE GLY ALA SEQRES 2 B 164 GLY THR THR SER VAL TYR VAL ASN LEU ASP PRO VAL ILE SEQRES 3 B 164 GLN PRO GLY GLN ASN LEU VAL VAL ASP LEU SER GLN HIS SEQRES 4 B 164 ILE SER CYS TRP ASN ASP TYR GLY GLY TRP TYR ASP THR SEQRES 5 B 164 ASP HIS ILE ASN LEU VAL GLN GLY SER ALA PHE ALA GLY SEQRES 6 B 164 SER LEU GLN SER TYR LYS GLY SER LEU TYR TRP ASN ASN SEQRES 7 B 164 VAL THR TYR PRO PHE PRO LEU THR THR ASN THR ASN VAL SEQRES 8 B 164 LEU ASP ILE GLY ASP LYS THR PRO MET PRO LEU PRO LEU SEQRES 9 B 164 LYS LEU TYR ILE THR PRO VAL GLY ALA ALA GLY GLY VAL SEQRES 10 B 164 VAL ILE LYS ALA GLY GLU VAL ILE ALA ARG ILE HIS MET SEQRES 11 B 164 TYR LYS ILE ALA THR LEU GLY SER GLY ASN PRO ARG ASN SEQRES 12 B 164 PHE THR TRP ASN ILE ILE SER ASN ASN SER VAL VAL MET SEQRES 13 B 164 PRO THR HIS HIS HIS HIS HIS HIS HET A2G C 1 15 HET GAL C 2 11 HET A2G D 1 15 HET GAL D 2 11 HET NI B 203 1 HETNAM A2G 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NI NICKEL (II) ION FORMUL 3 A2G 2(C8 H15 N O6) FORMUL 3 GAL 2(C6 H12 O6) FORMUL 5 NI NI 2+ FORMUL 6 HOH *80(H2 O) SHEET 1 AA1 3 SER A 2 VAL A 5 0 SHEET 2 AA1 3 ILE A 40 TRP A 43 -1 O TRP A 43 N SER A 2 SHEET 3 AA1 3 MET A 100 PRO A 101 -1 O MET A 100 N CYS A 42 SHEET 1 AA2 4 GLY A 14 VAL A 20 0 SHEET 2 AA2 4 ARG A 142 SER A 150 1 O ASN A 147 N VAL A 18 SHEET 3 AA2 4 VAL A 124 ILE A 133 -1 N ILE A 125 O ILE A 148 SHEET 4 AA2 4 ALA A 62 PHE A 63 -1 N ALA A 62 O ARG A 127 SHEET 1 AA3 5 GLY A 14 VAL A 20 0 SHEET 2 AA3 5 ARG A 142 SER A 150 1 O ASN A 147 N VAL A 18 SHEET 3 AA3 5 VAL A 124 ILE A 133 -1 N ILE A 125 O ILE A 148 SHEET 4 AA3 5 ASP A 53 LEU A 57 -1 N ASN A 56 O TYR A 131 SHEET 5 AA3 5 LEU A 92 ILE A 94 -1 O ILE A 94 N ASP A 53 SHEET 1 AA4 4 LEU A 32 ASP A 35 0 SHEET 2 AA4 4 LEU A 104 THR A 109 -1 O ILE A 108 N LEU A 32 SHEET 3 AA4 4 LYS A 71 TRP A 76 -1 N SER A 73 O TYR A 107 SHEET 4 AA4 4 VAL A 79 PHE A 83 -1 O VAL A 79 N TRP A 76 SHEET 1 AA5 2 VAL A 117 ILE A 119 0 SHEET 2 AA5 2 VAL A 154 VAL A 155 -1 O VAL A 154 N VAL A 118 SHEET 1 AA6 3 SER B 2 VAL B 5 0 SHEET 2 AA6 3 ILE B 40 TRP B 43 -1 O TRP B 43 N SER B 2 SHEET 3 AA6 3 MET B 100 PRO B 101 -1 O MET B 100 N CYS B 42 SHEET 1 AA7 4 GLY B 14 VAL B 20 0 SHEET 2 AA7 4 ARG B 142 SER B 150 1 O ASN B 147 N VAL B 18 SHEET 3 AA7 4 VAL B 124 ILE B 133 -1 N ILE B 125 O ILE B 148 SHEET 4 AA7 4 ALA B 62 PHE B 63 -1 N ALA B 62 O ARG B 127 SHEET 1 AA8 5 GLY B 14 VAL B 20 0 SHEET 2 AA8 5 ARG B 142 SER B 150 1 O ASN B 147 N VAL B 18 SHEET 3 AA8 5 VAL B 124 ILE B 133 -1 N ILE B 125 O ILE B 148 SHEET 4 AA8 5 ASP B 53 LEU B 57 -1 N ASN B 56 O TYR B 131 SHEET 5 AA8 5 LEU B 92 ILE B 94 -1 O ILE B 94 N ASP B 53 SHEET 1 AA9 4 LEU B 32 ASP B 35 0 SHEET 2 AA9 4 LEU B 104 THR B 109 -1 O ILE B 108 N LEU B 32 SHEET 3 AA9 4 LYS B 71 TRP B 76 -1 N SER B 73 O TYR B 107 SHEET 4 AA9 4 VAL B 79 PHE B 83 -1 O VAL B 79 N TRP B 76 SHEET 1 AB1 2 GLY B 116 ILE B 119 0 SHEET 2 AB1 2 VAL B 154 MET B 156 -1 O VAL B 154 N VAL B 118 SSBOND 1 CYS A 3 CYS A 42 1555 1555 2.16 SSBOND 2 CYS B 3 CYS B 42 1555 1555 2.20 LINK O3 A2G C 1 C1 GAL C 2 1555 1555 1.33 LINK O3 A2G D 1 C1 GAL D 2 1555 1555 1.32 CISPEP 1 PHE A 83 PRO A 84 0 7.33 CISPEP 2 PHE B 83 PRO B 84 0 2.26 CRYST1 118.820 51.460 53.740 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008416 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019433 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018608 0.00000