HEADER TRANSFERASE 14-AUG-16 5LPP TITLE TRNA GUANINE TRANSGLYCOSYLASE (TGT) IN CO-CRYSTALLIZED COMPLEX (SPACE TITLE 2 GROUP C2) WITH 6-AMINO-4-(2-((3AR,4R,6R,6AR)-6-METHOXY-2,2- TITLE 3 DIMETHYLTETRAHYDROFURO[3,4-D][1,3]DIOXOL-4-YL)ETHYL)-2-(METHYLAMINO)- TITLE 4 1H-IMIDAZO[4,5-G]QUINAZOLIN-8(7H)-ONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUEUINE TRNA-RIBOSYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GUANINE INSERTION ENZYME,TRNA-GUANINE TRANSGLYCOSYLASE; COMPND 5 EC: 2.4.2.29; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZYMOMONAS MOBILIS SUBSP. MOBILIS (STRAIN ATCC SOURCE 3 31821 / ZM4 / CP4); SOURCE 4 ORGANISM_TAXID: 264203; SOURCE 5 GENE: TGT, ZMO0363; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CARBOHYDRATE-BASED INHIBITORS, HOMODIMER, SHIGELLOSIS, TRANSFERASE, KEYWDS 2 TRANSFERASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR F.R.EHRMANN,A.HEINE,G.KLEBE REVDAT 2 10-JAN-24 5LPP 1 REMARK REVDAT 1 30-AUG-17 5LPP 0 JRNL AUTH F.R.EHRMANN,T.BOTZANOWSKI,T.PFAFFENDER,A.HEINE,F.DIEDERICH, JRNL AUTH 2 S.SANGLIER-CIANFERANI,G.KLEBE JRNL TITL CARBOHYDRATE-BASED INHIBITORS TARGETING THE RIBOSE-34 POCKET JRNL TITL 2 OF Z.MOBILIS TGT AND CHANGING THE OLIGOMERIC STATE OF THE JRNL TITL 3 HOMODIMER JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: 1492 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 26415 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1321 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6100 - 4.1391 0.99 2850 151 0.1770 0.1967 REMARK 3 2 4.1391 - 3.2857 1.00 2823 148 0.1597 0.1819 REMARK 3 3 3.2857 - 2.8704 1.00 2787 147 0.1773 0.1994 REMARK 3 4 2.8704 - 2.6080 0.99 2773 146 0.1934 0.2625 REMARK 3 5 2.6080 - 2.4211 0.99 2772 146 0.1918 0.2786 REMARK 3 6 2.4211 - 2.2784 1.00 2776 146 0.1824 0.2513 REMARK 3 7 2.2784 - 2.1643 1.00 2780 146 0.1975 0.2227 REMARK 3 8 2.1643 - 2.0701 0.99 2776 146 0.2004 0.2336 REMARK 3 9 2.0701 - 1.9900 0.99 2757 145 0.2467 0.3150 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2693 REMARK 3 ANGLE : 0.799 3637 REMARK 3 CHIRALITY : 0.049 385 REMARK 3 PLANARITY : 0.006 503 REMARK 3 DIHEDRAL : 17.215 1613 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 11:105) REMARK 3 ORIGIN FOR THE GROUP (A): 94.0752 4.1349 20.1343 REMARK 3 T TENSOR REMARK 3 T11: 0.2456 T22: 0.2274 REMARK 3 T33: 0.2853 T12: 0.0310 REMARK 3 T13: -0.0117 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 1.3224 L22: -0.0456 REMARK 3 L33: 1.0805 L12: -0.5926 REMARK 3 L13: -0.0794 L23: 0.3041 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: -0.0240 S13: -0.1536 REMARK 3 S21: 0.0344 S22: -0.0374 S23: 0.0440 REMARK 3 S31: -0.0336 S32: -0.1012 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 106:135) REMARK 3 ORIGIN FOR THE GROUP (A): 94.0170 25.7433 30.7228 REMARK 3 T TENSOR REMARK 3 T11: 0.5685 T22: 0.3122 REMARK 3 T33: 0.3752 T12: 0.0730 REMARK 3 T13: 0.0099 T23: -0.0741 REMARK 3 L TENSOR REMARK 3 L11: 1.3212 L22: 0.1781 REMARK 3 L33: 0.5342 L12: 0.3531 REMARK 3 L13: -0.1231 L23: -0.2173 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: -0.4837 S13: -0.1090 REMARK 3 S21: -0.4410 S22: -0.3174 S23: -0.6445 REMARK 3 S31: -0.0414 S32: 0.1137 S33: 0.0130 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 136:159) REMARK 3 ORIGIN FOR THE GROUP (A): 92.6247 13.8824 29.5093 REMARK 3 T TENSOR REMARK 3 T11: 0.3020 T22: 0.3305 REMARK 3 T33: 0.2732 T12: 0.0324 REMARK 3 T13: 0.0161 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 0.1240 L22: 0.0950 REMARK 3 L33: 0.2594 L12: -0.0771 REMARK 3 L13: 0.1055 L23: -0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: -0.1736 S13: 0.1416 REMARK 3 S21: -0.0160 S22: 0.0237 S23: -0.0373 REMARK 3 S31: -0.1721 S32: 0.0803 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 160:289) REMARK 3 ORIGIN FOR THE GROUP (A): 106.8638 13.2663 25.4684 REMARK 3 T TENSOR REMARK 3 T11: 0.2875 T22: 0.2533 REMARK 3 T33: 0.2550 T12: -0.0098 REMARK 3 T13: -0.0038 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 1.6108 L22: 1.4315 REMARK 3 L33: 1.2787 L12: -0.3739 REMARK 3 L13: -0.4945 L23: 0.3934 REMARK 3 S TENSOR REMARK 3 S11: 0.0674 S12: -0.2671 S13: 0.1932 REMARK 3 S21: 0.0302 S22: 0.0624 S23: -0.1208 REMARK 3 S31: -0.3275 S32: 0.1665 S33: 0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 290:382) REMARK 3 ORIGIN FOR THE GROUP (A): 102.3668 7.2739 -2.3736 REMARK 3 T TENSOR REMARK 3 T11: 0.2825 T22: 0.3107 REMARK 3 T33: 0.2949 T12: 0.0112 REMARK 3 T13: 0.0046 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 0.4891 L22: -0.0987 REMARK 3 L33: 0.8655 L12: -0.4684 REMARK 3 L13: 1.2469 L23: -0.7443 REMARK 3 S TENSOR REMARK 3 S11: 0.0644 S12: 0.1073 S13: -0.0486 REMARK 3 S21: -0.1137 S22: -0.0257 S23: 0.0127 REMARK 3 S31: 0.1208 S32: 0.1582 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LPP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1200001168. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26417 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 42.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.48800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1P0D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 8000,100MM MES, 1MM DTT, 10% REMARK 280 DMSO, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.71150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.22150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.71150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.22150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 170.84600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 GLN A 7 REMARK 465 GLU A 8 REMARK 465 THR A 9 REMARK 465 VAL A 51 REMARK 465 LYS A 52 REMARK 465 ALA A 53 REMARK 465 LEU A 54 REMARK 465 LYS A 55 REMARK 465 PRO A 56 REMARK 465 GLU A 57 REMARK 465 THR A 58 REMARK 465 VAL A 59 REMARK 465 ARG A 60 REMARK 465 ALA A 61 REMARK 465 THR A 62 REMARK 465 GLY A 63 REMARK 465 GLN A 107 REMARK 465 VAL A 108 REMARK 465 MET A 109 REMARK 465 SER A 110 REMARK 465 LEU A 111 REMARK 465 SER A 112 REMARK 465 SER A 113 REMARK 465 LEU A 114 REMARK 465 THR A 115 REMARK 465 LYS A 116 REMARK 465 LYS A 125 REMARK 465 SER A 126 REMARK 465 HIS A 127 REMARK 465 LEU A 128 REMARK 465 ASP A 129 REMARK 465 GLY A 130 REMARK 465 SER A 131 REMARK 465 ARG A 132 REMARK 465 HIS A 133 REMARK 465 SER A 316 REMARK 465 GLU A 317 REMARK 465 ARG A 384 REMARK 465 ASN A 385 REMARK 465 SER A 386 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 10 CG OD1 OD2 REMARK 470 THR A 50 OG1 CG2 REMARK 470 ARG A 77 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 82 CG CD NE CZ NH1 NH2 REMARK 470 SER A 91 OG REMARK 470 ARG A 97 NH1 NH2 REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 470 THR A 123 OG1 CG2 REMARK 470 MET A 134 CG SD CE REMARK 470 GLU A 142 OE1 OE2 REMARK 470 ARG A 167 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 GLU A 220 OE1 OE2 REMARK 470 LYS A 264 CE NZ REMARK 470 LEU A 283 CD1 CD2 REMARK 470 ARG A 286 NE CZ NH1 NH2 REMARK 470 ARG A 289 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 290 OD1 ND2 REMARK 470 ARG A 306 CZ NH1 NH2 REMARK 470 HIS A 319 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 322 CG1 CG2 REMARK 470 GLN A 324 CG CD OE1 NE2 REMARK 470 LYS A 325 CG CD CE NZ REMARK 470 ILE A 340 CD1 REMARK 470 GLU A 348 CG CD OE1 OE2 REMARK 470 GLN A 375 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 14 118.17 -166.88 REMARK 500 GLN A 203 -161.21 -123.75 REMARK 500 SER A 205 -133.55 62.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 72C A 402 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 318 SG REMARK 620 2 CYS A 320 SG 101.3 REMARK 620 3 CYS A 323 SG 96.0 125.0 REMARK 620 4 HIS A 349 ND1 114.4 117.9 100.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 72C A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5LPO RELATED DB: PDB REMARK 900 RELATED ID: 4KWO RELATED DB: PDB REMARK 900 RELATED ID: 4LEQ RELATED DB: PDB REMARK 900 RELATED ID: 4PUK RELATED DB: PDB REMARK 900 RELATED ID: 5I00 RELATED DB: PDB REMARK 900 RELATED ID: 5I02 RELATED DB: PDB REMARK 900 RELATED ID: 5I06 RELATED DB: PDB REMARK 900 RELATED ID: 1P0D RELATED DB: PDB DBREF 5LPP A 1 386 UNP P28720 TGT_ZYMMO 1 386 SEQADV 5LPP LYS A 312 UNP P28720 THR 312 CONFLICT SEQRES 1 A 386 MET VAL GLU ALA THR ALA GLN GLU THR ASP ARG PRO ARG SEQRES 2 A 386 PHE SER PHE SER ILE ALA ALA ARG GLU GLY LYS ALA ARG SEQRES 3 A 386 THR GLY THR ILE GLU MET LYS ARG GLY VAL ILE ARG THR SEQRES 4 A 386 PRO ALA PHE MET PRO VAL GLY THR ALA ALA THR VAL LYS SEQRES 5 A 386 ALA LEU LYS PRO GLU THR VAL ARG ALA THR GLY ALA ASP SEQRES 6 A 386 ILE ILE LEU GLY ASN THR TYR HIS LEU MET LEU ARG PRO SEQRES 7 A 386 GLY ALA GLU ARG ILE ALA LYS LEU GLY GLY LEU HIS SER SEQRES 8 A 386 PHE MET GLY TRP ASP ARG PRO ILE LEU THR ASP SER GLY SEQRES 9 A 386 GLY TYR GLN VAL MET SER LEU SER SER LEU THR LYS GLN SEQRES 10 A 386 SER GLU GLU GLY VAL THR PHE LYS SER HIS LEU ASP GLY SEQRES 11 A 386 SER ARG HIS MET LEU SER PRO GLU ARG SER ILE GLU ILE SEQRES 12 A 386 GLN HIS LEU LEU GLY SER ASP ILE VAL MET ALA PHE ASP SEQRES 13 A 386 GLU CYS THR PRO TYR PRO ALA THR PRO SER ARG ALA ALA SEQRES 14 A 386 SER SER MET GLU ARG SER MET ARG TRP ALA LYS ARG SER SEQRES 15 A 386 ARG ASP ALA PHE ASP SER ARG LYS GLU GLN ALA GLU ASN SEQRES 16 A 386 ALA ALA LEU PHE GLY ILE GLN GLN GLY SER VAL PHE GLU SEQRES 17 A 386 ASN LEU ARG GLN GLN SER ALA ASP ALA LEU ALA GLU ILE SEQRES 18 A 386 GLY PHE ASP GLY TYR ALA VAL GLY GLY LEU ALA VAL GLY SEQRES 19 A 386 GLU GLY GLN ASP GLU MET PHE ARG VAL LEU ASP PHE SER SEQRES 20 A 386 VAL PRO MET LEU PRO ASP ASP LYS PRO HIS TYR LEU MET SEQRES 21 A 386 GLY VAL GLY LYS PRO ASP ASP ILE VAL GLY ALA VAL GLU SEQRES 22 A 386 ARG GLY ILE ASP MET PHE ASP CYS VAL LEU PRO THR ARG SEQRES 23 A 386 SER GLY ARG ASN GLY GLN ALA PHE THR TRP ASP GLY PRO SEQRES 24 A 386 ILE ASN ILE ARG ASN ALA ARG PHE SER GLU ASP LEU LYS SEQRES 25 A 386 PRO LEU ASP SER GLU CYS HIS CYS ALA VAL CYS GLN LYS SEQRES 26 A 386 TRP SER ARG ALA TYR ILE HIS HIS LEU ILE ARG ALA GLY SEQRES 27 A 386 GLU ILE LEU GLY ALA MET LEU MET THR GLU HIS ASN ILE SEQRES 28 A 386 ALA PHE TYR GLN GLN LEU MET GLN LYS ILE ARG ASP SER SEQRES 29 A 386 ILE SER GLU GLY ARG PHE SER GLN PHE ALA GLN ASP PHE SEQRES 30 A 386 ARG ALA ARG TYR PHE ALA ARG ASN SER HET ZN A 401 1 HET 72C A 402 27 HETNAM ZN ZINC ION HETNAM 72C 4-[2-[(3~{A}~{R},4~{R},6~{R},6~{A}~{R})-4-METHOXY-2,2- HETNAM 2 72C DIMETHYL-3~{A},4,6,6~{A}-TETRAHYDROFURO[3,4-D][1, HETNAM 3 72C 3]DIOXOL-6-YL]ETHYL]-6-AZANYL-2-(METHYLAMINO)-1,7- HETNAM 4 72C DIHYDROIMIDAZO[4,5-G]QUINAZOLIN-8-ONE FORMUL 2 ZN ZN 2+ FORMUL 3 72C C20 H26 N6 O5 FORMUL 4 HOH *154(H2 O) HELIX 1 AA1 ASN A 70 ARG A 77 1 8 HELIX 2 AA2 GLY A 79 LEU A 86 1 8 HELIX 3 AA3 GLY A 88 GLY A 94 1 7 HELIX 4 AA4 SER A 136 GLY A 148 1 13 HELIX 5 AA5 THR A 164 SER A 188 1 25 HELIX 6 AA6 ARG A 189 ALA A 196 1 8 HELIX 7 AA7 PHE A 207 GLY A 222 1 16 HELIX 8 AA8 GLY A 236 VAL A 248 1 13 HELIX 9 AA9 PRO A 249 LEU A 251 5 3 HELIX 10 AB1 LYS A 264 GLU A 273 1 10 HELIX 11 AB2 VAL A 282 ASN A 290 1 9 HELIX 12 AB3 ASN A 304 SER A 308 5 5 HELIX 13 AB4 CYS A 320 TRP A 326 1 7 HELIX 14 AB5 SER A 327 ALA A 337 1 11 HELIX 15 AB6 GLU A 339 GLU A 367 1 29 HELIX 16 AB7 ARG A 369 PHE A 382 1 14 SHEET 1 AA1 3 SER A 15 GLU A 22 0 SHEET 2 AA1 3 ALA A 25 MET A 32 -1 O GLU A 31 N SER A 15 SHEET 3 AA1 3 GLY A 35 THR A 39 -1 O ILE A 37 N ILE A 30 SHEET 1 AA2 8 ALA A 41 PHE A 42 0 SHEET 2 AA2 8 MET A 278 PHE A 279 1 O PHE A 279 N ALA A 41 SHEET 3 AA2 8 HIS A 257 LEU A 259 1 N LEU A 259 O MET A 278 SHEET 4 AA2 8 GLY A 225 VAL A 228 1 N VAL A 228 O TYR A 258 SHEET 5 AA2 8 ALA A 197 GLN A 202 1 N GLY A 200 O ALA A 227 SHEET 6 AA2 8 ILE A 151 MET A 153 1 N VAL A 152 O ALA A 197 SHEET 7 AA2 8 ILE A 99 THR A 101 1 N THR A 101 O ILE A 151 SHEET 8 AA2 8 ILE A 67 GLY A 69 1 N GLY A 69 O LEU A 100 SHEET 1 AA3 2 GLN A 292 THR A 295 0 SHEET 2 AA3 2 GLY A 298 ASN A 301 -1 O ILE A 300 N ALA A 293 LINK SG CYS A 318 ZN ZN A 401 1555 1555 2.38 LINK SG CYS A 320 ZN ZN A 401 1555 1555 2.31 LINK SG CYS A 323 ZN ZN A 401 1555 1555 2.28 LINK ND1 HIS A 349 ZN ZN A 401 1555 1555 2.15 CISPEP 1 THR A 39 PRO A 40 0 0.89 CISPEP 2 ARG A 77 PRO A 78 0 -2.20 CISPEP 3 TYR A 161 PRO A 162 0 -1.59 CISPEP 4 VAL A 262 GLY A 263 0 2.77 SITE 1 AC1 4 CYS A 318 CYS A 320 CYS A 323 HIS A 349 SITE 1 AC2 16 LEU A 68 ASP A 102 SER A 103 TYR A 106 SITE 2 AC2 16 ASP A 156 CYS A 158 ILE A 201 GLN A 203 SITE 3 AC2 16 GLY A 229 GLY A 230 LEU A 231 ALA A 232 SITE 4 AC2 16 MET A 260 GLY A 261 ASP A 280 HOH A 589 CRYST1 85.423 64.443 71.223 90.00 93.88 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011706 0.000000 0.000794 0.00000 SCALE2 0.000000 0.015518 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014073 0.00000