HEADER TRANSFERASE 14-AUG-16 5LPQ TITLE TRNA GUANINE TRANSGLYCOSYLASE (TGT) IN CO-CRYSTALLIZED COMPLEX (SPACE TITLE 2 GROUP P21) WITH 6-AMINO-4-(2-((3AR,4R,6R,6AR)-6-METHOXY-2,2- TITLE 3 DIMETHYLTETRAHYDROFURO[3,4-D][1,3]DIOXOL-4-YL)ETHYL)-2-(METHYLAMINO)- TITLE 4 1H-IMIDAZO[4,5-G]QUINAZOLIN-8(7H)-ONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUEUINE TRNA-RIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GUANINE INSERTION ENZYME,TRNA-GUANINE TRANSGLYCOSYLASE; COMPND 5 EC: 2.4.2.29; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZYMOMONAS MOBILIS SUBSP. MOBILIS (STRAIN ATCC SOURCE 3 31821 / ZM4 / CP4); SOURCE 4 ORGANISM_TAXID: 264203; SOURCE 5 STRAIN: ATCC 31821 / ZM4 / CP4; SOURCE 6 GENE: TGT, ZMO0363; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CARBOHYDRATE-BASED INHIBITORS, HOMODIMER, SHIGELLOSIS, TRANSFERASE, KEYWDS 2 TRANSFERASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR F.R.EHRMANN,A.HEINE,G.KLEBE REVDAT 2 10-JAN-24 5LPQ 1 REMARK REVDAT 1 30-AUG-17 5LPQ 0 JRNL AUTH F.R.EHRMANN,T.BOTZANOWSKI,T.PFAFFENDER,A.HEINE,F.DIEDERICH, JRNL AUTH 2 S.SANGLIER-CIANFERANI,G.KLEBE JRNL TITL CARBOHYDRATE-BASED INHIBITORS TARGETING THE RIBOSE-34 POCKET JRNL TITL 2 OF Z.MOBILIS TGT AND CHANGING THE OLIGOMERIC STATE OF THE JRNL TITL 3 HOMODIMER JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: 1492) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 28448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6700 - 5.4314 0.99 2817 149 0.2024 0.2366 REMARK 3 2 5.4314 - 4.3123 1.00 2766 146 0.1852 0.2416 REMARK 3 3 4.3123 - 3.7675 0.99 2737 144 0.1969 0.2029 REMARK 3 4 3.7675 - 3.4232 1.00 2718 143 0.2244 0.2594 REMARK 3 5 3.4232 - 3.1779 1.00 2753 145 0.2403 0.2733 REMARK 3 6 3.1779 - 2.9906 1.00 2721 143 0.2608 0.3144 REMARK 3 7 2.9906 - 2.8408 1.00 2730 144 0.2685 0.3010 REMARK 3 8 2.8408 - 2.7172 0.99 2736 144 0.2756 0.3002 REMARK 3 9 2.7172 - 2.6126 1.00 2742 144 0.2673 0.3170 REMARK 3 10 2.6126 - 2.5200 0.84 2305 121 0.3051 0.3323 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5639 REMARK 3 ANGLE : 0.479 7622 REMARK 3 CHIRALITY : 0.037 813 REMARK 3 PLANARITY : 0.004 1050 REMARK 3 DIHEDRAL : 17.053 3368 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1200001169. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28457 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.520 REMARK 200 RESOLUTION RANGE LOW (A) : 50.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11400 REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1P0D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 8000, 100MM MES, 1MM DTT, 10% REMARK 280 DMSO, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.42550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 GLN A 7 REMARK 465 GLU A 8 REMARK 465 THR A 9 REMARK 465 VAL A 51 REMARK 465 LYS A 52 REMARK 465 ALA A 53 REMARK 465 LEU A 54 REMARK 465 LYS A 55 REMARK 465 PRO A 56 REMARK 465 GLU A 57 REMARK 465 THR A 58 REMARK 465 VAL A 59 REMARK 465 ARG A 60 REMARK 465 ALA A 61 REMARK 465 THR A 62 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 GLU B 3 REMARK 465 ALA B 4 REMARK 465 THR B 5 REMARK 465 ALA B 6 REMARK 465 GLN B 7 REMARK 465 GLU B 8 REMARK 465 THR B 9 REMARK 465 ASP B 10 REMARK 465 VAL B 51 REMARK 465 LYS B 52 REMARK 465 ALA B 53 REMARK 465 LEU B 54 REMARK 465 LYS B 55 REMARK 465 PRO B 56 REMARK 465 GLU B 57 REMARK 465 THR B 58 REMARK 465 VAL B 59 REMARK 465 ARG B 60 REMARK 465 ALA B 61 REMARK 465 THR B 62 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 10 OD1 OD2 REMARK 470 ARG A 11 NE CZ NH1 NH2 REMARK 470 ARG A 21 NH1 NH2 REMARK 470 LYS A 24 CD CE NZ REMARK 470 LYS A 33 CD CE NZ REMARK 470 THR A 47 OG1 CG2 REMARK 470 THR A 50 OG1 CG2 REMARK 470 MET A 75 CE REMARK 470 LEU A 76 CD1 CD2 REMARK 470 ARG A 82 CD NE CZ NH1 NH2 REMARK 470 LYS A 85 CD CE NZ REMARK 470 LEU A 86 CD1 CD2 REMARK 470 ASP A 96 OD1 OD2 REMARK 470 ARG A 97 CZ NH1 NH2 REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 GLU A 120 OE1 OE2 REMARK 470 THR A 123 OG1 CG2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 SER A 126 OG REMARK 470 SER A 131 OG REMARK 470 ARG A 132 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 142 OE1 OE2 REMARK 470 SER A 166 OG REMARK 470 SER A 170 OG REMARK 470 MET A 172 CE REMARK 470 ARG A 174 NH1 NH2 REMARK 470 LYS A 180 NZ REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 LEU A 198 CD1 CD2 REMARK 470 GLU A 220 CD OE1 OE2 REMARK 470 ARG A 242 CD NE CZ NH1 NH2 REMARK 470 LYS A 255 CE NZ REMARK 470 LYS A 264 NZ REMARK 470 LEU A 283 CD1 CD2 REMARK 470 ARG A 286 CZ NH1 NH2 REMARK 470 ARG A 289 CG CD NE CZ NH1 NH2 REMARK 470 SER A 308 OG REMARK 470 LEU A 311 CD1 CD2 REMARK 470 GLN A 324 CG CD OE1 NE2 REMARK 470 LYS A 325 CG CD CE NZ REMARK 470 ARG A 336 CD NE CZ NH1 NH2 REMARK 470 GLU A 348 OE1 OE2 REMARK 470 GLN A 359 OE1 NE2 REMARK 470 ARG A 369 CD NE CZ NH1 NH2 REMARK 470 GLN A 375 CD OE1 NE2 REMARK 470 ARG A 384 CZ NH1 NH2 REMARK 470 ARG B 11 NE CZ NH1 NH2 REMARK 470 ILE B 18 CD1 REMARK 470 LYS B 24 CG CD CE NZ REMARK 470 LYS B 33 CD CE NZ REMARK 470 THR B 47 OG1 CG2 REMARK 470 THR B 50 OG1 CG2 REMARK 470 MET B 75 CE REMARK 470 ARG B 82 CD NE CZ NH1 NH2 REMARK 470 LYS B 85 CD CE NZ REMARK 470 LEU B 86 CD1 CD2 REMARK 470 SER B 91 OG REMARK 470 ASP B 96 OD1 OD2 REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 GLU B 120 OE1 OE2 REMARK 470 THR B 123 OG1 CG2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 SER B 126 OG REMARK 470 SER B 131 OG REMARK 470 ARG B 132 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 141 CD1 REMARK 470 GLU B 142 CD OE1 OE2 REMARK 470 SER B 166 OG REMARK 470 ARG B 174 NH1 NH2 REMARK 470 SER B 188 OG REMARK 470 LYS B 190 CD CE NZ REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 GLU B 220 CD OE1 OE2 REMARK 470 ASP B 238 OD1 OD2 REMARK 470 LYS B 255 NZ REMARK 470 LYS B 264 CE NZ REMARK 470 LEU B 283 CD1 CD2 REMARK 470 ARG B 286 NH1 NH2 REMARK 470 ARG B 289 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 290 OD1 ND2 REMARK 470 LEU B 311 CD1 CD2 REMARK 470 GLN B 324 OE1 NE2 REMARK 470 LYS B 325 CG CD CE NZ REMARK 470 ARG B 336 CD NE CZ NH1 NH2 REMARK 470 GLU B 348 CD OE1 OE2 REMARK 470 ILE B 351 CD1 REMARK 470 GLN B 359 OE1 NE2 REMARK 470 ARG B 369 CG CD NE CZ NH1 NH2 REMARK 470 SER B 371 OG REMARK 470 GLN B 372 CD OE1 NE2 REMARK 470 GLN B 375 CG CD OE1 NE2 REMARK 470 ARG B 384 CZ NH1 NH2 REMARK 470 ASN B 385 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 205 -123.60 60.28 REMARK 500 ASP B 156 -164.08 -129.56 REMARK 500 SER B 205 -123.07 60.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 318 SG REMARK 620 2 CYS A 320 SG 99.2 REMARK 620 3 CYS A 323 SG 110.1 113.5 REMARK 620 4 HIS A 349 ND1 112.8 122.6 99.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 318 SG REMARK 620 2 CYS B 320 SG 100.5 REMARK 620 3 CYS B 323 SG 105.9 114.2 REMARK 620 4 HIS B 349 ND1 111.9 126.8 96.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 72C A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 72C B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5LPO RELATED DB: PDB REMARK 900 RELATED ID: 4KWO RELATED DB: PDB REMARK 900 RELATED ID: 4LEQ RELATED DB: PDB REMARK 900 RELATED ID: 4PUK RELATED DB: PDB REMARK 900 RELATED ID: 5I00 RELATED DB: PDB REMARK 900 RELATED ID: 5I02 RELATED DB: PDB REMARK 900 RELATED ID: 5I06 RELATED DB: PDB REMARK 900 RELATED ID: 5I07 RELATED DB: PDB REMARK 900 RELATED ID: 1P0D RELATED DB: PDB REMARK 900 RELATED ID: 5LPP RELATED DB: PDB DBREF 5LPQ A 1 386 UNP P28720 TGT_ZYMMO 1 386 DBREF 5LPQ B 1 386 UNP P28720 TGT_ZYMMO 1 386 SEQADV 5LPQ LYS A 312 UNP P28720 THR 312 CONFLICT SEQADV 5LPQ LYS B 312 UNP P28720 THR 312 CONFLICT SEQRES 1 A 386 MET VAL GLU ALA THR ALA GLN GLU THR ASP ARG PRO ARG SEQRES 2 A 386 PHE SER PHE SER ILE ALA ALA ARG GLU GLY LYS ALA ARG SEQRES 3 A 386 THR GLY THR ILE GLU MET LYS ARG GLY VAL ILE ARG THR SEQRES 4 A 386 PRO ALA PHE MET PRO VAL GLY THR ALA ALA THR VAL LYS SEQRES 5 A 386 ALA LEU LYS PRO GLU THR VAL ARG ALA THR GLY ALA ASP SEQRES 6 A 386 ILE ILE LEU GLY ASN THR TYR HIS LEU MET LEU ARG PRO SEQRES 7 A 386 GLY ALA GLU ARG ILE ALA LYS LEU GLY GLY LEU HIS SER SEQRES 8 A 386 PHE MET GLY TRP ASP ARG PRO ILE LEU THR ASP SER GLY SEQRES 9 A 386 GLY TYR GLN VAL MET SER LEU SER SER LEU THR LYS GLN SEQRES 10 A 386 SER GLU GLU GLY VAL THR PHE LYS SER HIS LEU ASP GLY SEQRES 11 A 386 SER ARG HIS MET LEU SER PRO GLU ARG SER ILE GLU ILE SEQRES 12 A 386 GLN HIS LEU LEU GLY SER ASP ILE VAL MET ALA PHE ASP SEQRES 13 A 386 GLU CYS THR PRO TYR PRO ALA THR PRO SER ARG ALA ALA SEQRES 14 A 386 SER SER MET GLU ARG SER MET ARG TRP ALA LYS ARG SER SEQRES 15 A 386 ARG ASP ALA PHE ASP SER ARG LYS GLU GLN ALA GLU ASN SEQRES 16 A 386 ALA ALA LEU PHE GLY ILE GLN GLN GLY SER VAL PHE GLU SEQRES 17 A 386 ASN LEU ARG GLN GLN SER ALA ASP ALA LEU ALA GLU ILE SEQRES 18 A 386 GLY PHE ASP GLY TYR ALA VAL GLY GLY LEU ALA VAL GLY SEQRES 19 A 386 GLU GLY GLN ASP GLU MET PHE ARG VAL LEU ASP PHE SER SEQRES 20 A 386 VAL PRO MET LEU PRO ASP ASP LYS PRO HIS TYR LEU MET SEQRES 21 A 386 GLY VAL GLY LYS PRO ASP ASP ILE VAL GLY ALA VAL GLU SEQRES 22 A 386 ARG GLY ILE ASP MET PHE ASP CYS VAL LEU PRO THR ARG SEQRES 23 A 386 SER GLY ARG ASN GLY GLN ALA PHE THR TRP ASP GLY PRO SEQRES 24 A 386 ILE ASN ILE ARG ASN ALA ARG PHE SER GLU ASP LEU LYS SEQRES 25 A 386 PRO LEU ASP SER GLU CYS HIS CYS ALA VAL CYS GLN LYS SEQRES 26 A 386 TRP SER ARG ALA TYR ILE HIS HIS LEU ILE ARG ALA GLY SEQRES 27 A 386 GLU ILE LEU GLY ALA MET LEU MET THR GLU HIS ASN ILE SEQRES 28 A 386 ALA PHE TYR GLN GLN LEU MET GLN LYS ILE ARG ASP SER SEQRES 29 A 386 ILE SER GLU GLY ARG PHE SER GLN PHE ALA GLN ASP PHE SEQRES 30 A 386 ARG ALA ARG TYR PHE ALA ARG ASN SER SEQRES 1 B 386 MET VAL GLU ALA THR ALA GLN GLU THR ASP ARG PRO ARG SEQRES 2 B 386 PHE SER PHE SER ILE ALA ALA ARG GLU GLY LYS ALA ARG SEQRES 3 B 386 THR GLY THR ILE GLU MET LYS ARG GLY VAL ILE ARG THR SEQRES 4 B 386 PRO ALA PHE MET PRO VAL GLY THR ALA ALA THR VAL LYS SEQRES 5 B 386 ALA LEU LYS PRO GLU THR VAL ARG ALA THR GLY ALA ASP SEQRES 6 B 386 ILE ILE LEU GLY ASN THR TYR HIS LEU MET LEU ARG PRO SEQRES 7 B 386 GLY ALA GLU ARG ILE ALA LYS LEU GLY GLY LEU HIS SER SEQRES 8 B 386 PHE MET GLY TRP ASP ARG PRO ILE LEU THR ASP SER GLY SEQRES 9 B 386 GLY TYR GLN VAL MET SER LEU SER SER LEU THR LYS GLN SEQRES 10 B 386 SER GLU GLU GLY VAL THR PHE LYS SER HIS LEU ASP GLY SEQRES 11 B 386 SER ARG HIS MET LEU SER PRO GLU ARG SER ILE GLU ILE SEQRES 12 B 386 GLN HIS LEU LEU GLY SER ASP ILE VAL MET ALA PHE ASP SEQRES 13 B 386 GLU CYS THR PRO TYR PRO ALA THR PRO SER ARG ALA ALA SEQRES 14 B 386 SER SER MET GLU ARG SER MET ARG TRP ALA LYS ARG SER SEQRES 15 B 386 ARG ASP ALA PHE ASP SER ARG LYS GLU GLN ALA GLU ASN SEQRES 16 B 386 ALA ALA LEU PHE GLY ILE GLN GLN GLY SER VAL PHE GLU SEQRES 17 B 386 ASN LEU ARG GLN GLN SER ALA ASP ALA LEU ALA GLU ILE SEQRES 18 B 386 GLY PHE ASP GLY TYR ALA VAL GLY GLY LEU ALA VAL GLY SEQRES 19 B 386 GLU GLY GLN ASP GLU MET PHE ARG VAL LEU ASP PHE SER SEQRES 20 B 386 VAL PRO MET LEU PRO ASP ASP LYS PRO HIS TYR LEU MET SEQRES 21 B 386 GLY VAL GLY LYS PRO ASP ASP ILE VAL GLY ALA VAL GLU SEQRES 22 B 386 ARG GLY ILE ASP MET PHE ASP CYS VAL LEU PRO THR ARG SEQRES 23 B 386 SER GLY ARG ASN GLY GLN ALA PHE THR TRP ASP GLY PRO SEQRES 24 B 386 ILE ASN ILE ARG ASN ALA ARG PHE SER GLU ASP LEU LYS SEQRES 25 B 386 PRO LEU ASP SER GLU CYS HIS CYS ALA VAL CYS GLN LYS SEQRES 26 B 386 TRP SER ARG ALA TYR ILE HIS HIS LEU ILE ARG ALA GLY SEQRES 27 B 386 GLU ILE LEU GLY ALA MET LEU MET THR GLU HIS ASN ILE SEQRES 28 B 386 ALA PHE TYR GLN GLN LEU MET GLN LYS ILE ARG ASP SER SEQRES 29 B 386 ILE SER GLU GLY ARG PHE SER GLN PHE ALA GLN ASP PHE SEQRES 30 B 386 ARG ALA ARG TYR PHE ALA ARG ASN SER HET ZN A 401 1 HET 72C A 402 31 HET ZN B 401 1 HET 72C B 402 31 HETNAM ZN ZINC ION HETNAM 72C 4-[2-[(3~{A}~{R},4~{R},6~{R},6~{A}~{R})-4-METHOXY-2,2- HETNAM 2 72C DIMETHYL-3~{A},4,6,6~{A}-TETRAHYDROFURO[3,4-D][1, HETNAM 3 72C 3]DIOXOL-6-YL]ETHYL]-6-AZANYL-2-(METHYLAMINO)-1,7- HETNAM 4 72C DIHYDROIMIDAZO[4,5-G]QUINAZOLIN-8-ONE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 72C 2(C20 H26 N6 O5) FORMUL 7 HOH *105(H2 O) HELIX 1 AA1 ASN A 70 ARG A 77 1 8 HELIX 2 AA2 GLY A 79 LEU A 86 1 8 HELIX 3 AA3 GLY A 88 MET A 93 1 6 HELIX 4 AA4 GLY A 104 LEU A 111 1 8 HELIX 5 AA5 SER A 136 LEU A 147 1 12 HELIX 6 AA6 THR A 164 SER A 188 1 25 HELIX 7 AA7 ARG A 189 GLU A 194 1 6 HELIX 8 AA8 PHE A 207 GLY A 222 1 16 HELIX 9 AA9 GLY A 236 VAL A 248 1 13 HELIX 10 AB1 PRO A 249 LEU A 251 5 3 HELIX 11 AB2 LYS A 264 GLU A 273 1 10 HELIX 12 AB3 VAL A 282 ASN A 290 1 9 HELIX 13 AB4 ASN A 304 SER A 308 5 5 HELIX 14 AB5 CYS A 320 TRP A 326 1 7 HELIX 15 AB6 SER A 327 ALA A 337 1 11 HELIX 16 AB7 ILE A 340 GLU A 367 1 28 HELIX 17 AB8 ARG A 369 ARG A 384 1 16 HELIX 18 AB9 ASN B 70 ARG B 77 1 8 HELIX 19 AC1 GLY B 79 LEU B 86 1 8 HELIX 20 AC2 GLY B 88 MET B 93 1 6 HELIX 21 AC3 GLY B 104 LEU B 111 1 8 HELIX 22 AC4 SER B 136 LEU B 147 1 12 HELIX 23 AC5 THR B 164 SER B 188 1 25 HELIX 24 AC6 ARG B 189 GLU B 194 1 6 HELIX 25 AC7 PHE B 207 GLY B 222 1 16 HELIX 26 AC8 GLY B 236 VAL B 248 1 13 HELIX 27 AC9 PRO B 249 LEU B 251 5 3 HELIX 28 AD1 LYS B 264 GLU B 273 1 10 HELIX 29 AD2 VAL B 282 ASN B 290 1 9 HELIX 30 AD3 ASN B 304 SER B 308 5 5 HELIX 31 AD4 CYS B 320 TRP B 326 1 7 HELIX 32 AD5 SER B 327 ALA B 337 1 11 HELIX 33 AD6 ILE B 340 GLU B 367 1 28 HELIX 34 AD7 ARG B 369 ARG B 384 1 16 SHEET 1 AA1 3 PHE A 14 GLU A 22 0 SHEET 2 AA1 3 ALA A 25 MET A 32 -1 O GLU A 31 N SER A 15 SHEET 3 AA1 3 GLY A 35 THR A 39 -1 O THR A 39 N GLY A 28 SHEET 1 AA2 8 ALA A 41 PHE A 42 0 SHEET 2 AA2 8 MET A 278 PHE A 279 1 O PHE A 279 N ALA A 41 SHEET 3 AA2 8 HIS A 257 LEU A 259 1 N LEU A 259 O MET A 278 SHEET 4 AA2 8 GLY A 225 VAL A 228 1 N VAL A 228 O TYR A 258 SHEET 5 AA2 8 ALA A 197 GLN A 202 1 N GLY A 200 O ALA A 227 SHEET 6 AA2 8 ILE A 151 MET A 153 1 N VAL A 152 O ALA A 197 SHEET 7 AA2 8 ILE A 99 THR A 101 1 N THR A 101 O ILE A 151 SHEET 8 AA2 8 ILE A 67 GLY A 69 1 N ILE A 67 O LEU A 100 SHEET 1 AA3 3 THR A 115 GLN A 117 0 SHEET 2 AA3 3 VAL A 122 PHE A 124 -1 O THR A 123 N LYS A 116 SHEET 3 AA3 3 MET A 134 LEU A 135 -1 O LEU A 135 N VAL A 122 SHEET 1 AA4 2 GLN A 292 THR A 295 0 SHEET 2 AA4 2 GLY A 298 ASN A 301 -1 O ILE A 300 N ALA A 293 SHEET 1 AA5 3 PHE B 14 GLU B 22 0 SHEET 2 AA5 3 ALA B 25 MET B 32 -1 O GLU B 31 N SER B 15 SHEET 3 AA5 3 GLY B 35 THR B 39 -1 O ILE B 37 N ILE B 30 SHEET 1 AA6 8 ALA B 41 PHE B 42 0 SHEET 2 AA6 8 MET B 278 PHE B 279 1 O PHE B 279 N ALA B 41 SHEET 3 AA6 8 HIS B 257 LEU B 259 1 N LEU B 259 O MET B 278 SHEET 4 AA6 8 GLY B 225 VAL B 228 1 N VAL B 228 O TYR B 258 SHEET 5 AA6 8 ALA B 197 GLN B 202 1 N GLY B 200 O ALA B 227 SHEET 6 AA6 8 ILE B 151 MET B 153 1 N VAL B 152 O ALA B 197 SHEET 7 AA6 8 ILE B 99 THR B 101 1 N THR B 101 O ILE B 151 SHEET 8 AA6 8 ILE B 67 GLY B 69 1 N ILE B 67 O LEU B 100 SHEET 1 AA7 3 THR B 115 GLN B 117 0 SHEET 2 AA7 3 VAL B 122 PHE B 124 -1 O THR B 123 N LYS B 116 SHEET 3 AA7 3 MET B 134 LEU B 135 -1 O LEU B 135 N VAL B 122 SHEET 1 AA8 2 GLN B 292 THR B 295 0 SHEET 2 AA8 2 GLY B 298 ASN B 301 -1 O ILE B 300 N ALA B 293 LINK SG CYS A 318 ZN ZN A 401 1555 1555 2.20 LINK SG CYS A 320 ZN ZN A 401 1555 1555 2.31 LINK SG CYS A 323 ZN ZN A 401 1555 1555 2.20 LINK ND1 HIS A 349 ZN ZN A 401 1555 1555 2.04 LINK SG CYS B 318 ZN ZN B 401 1555 1555 2.18 LINK SG CYS B 320 ZN ZN B 401 1555 1555 2.25 LINK SG CYS B 323 ZN ZN B 401 1555 1555 2.25 LINK ND1 HIS B 349 ZN ZN B 401 1555 1555 2.05 CISPEP 1 THR A 39 PRO A 40 0 -1.83 CISPEP 2 ARG A 77 PRO A 78 0 1.35 CISPEP 3 TYR A 161 PRO A 162 0 -2.03 CISPEP 4 VAL A 262 GLY A 263 0 0.48 CISPEP 5 THR B 39 PRO B 40 0 -1.58 CISPEP 6 ARG B 77 PRO B 78 0 0.38 CISPEP 7 TYR B 161 PRO B 162 0 -1.74 CISPEP 8 VAL B 262 GLY B 263 0 -0.10 SITE 1 AC1 4 CYS A 318 CYS A 320 CYS A 323 HIS A 349 SITE 1 AC2 16 ASN A 70 ASP A 102 SER A 103 TYR A 106 SITE 2 AC2 16 GLN A 107 ASP A 156 CYS A 158 ILE A 201 SITE 3 AC2 16 GLN A 203 GLY A 229 GLY A 230 LEU A 231 SITE 4 AC2 16 ALA A 232 MET A 260 GLY A 261 GLU B 339 SITE 1 AC3 4 CYS B 318 CYS B 320 CYS B 323 HIS B 349 SITE 1 AC4 15 GLU A 339 LEU B 68 ASP B 102 TYR B 106 SITE 2 AC4 15 GLN B 107 ASP B 156 CYS B 158 ILE B 201 SITE 3 AC4 15 GLN B 203 GLY B 229 GLY B 230 LEU B 231 SITE 4 AC4 15 ALA B 232 MET B 260 GLY B 261 CRYST1 68.900 78.851 84.943 90.00 109.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014514 0.000000 0.005203 0.00000 SCALE2 0.000000 0.012682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012506 0.00000