HEADER CALCIUM BINDING PROTEIN 15-AUG-16 5LPX TITLE CRYSTAL STRUCTURE OF PKC PHOSPHORYLATION-MIMICKING MUTANT (S26E) TITLE 2 ANNEXIN A2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANNEXIN A2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANNEXIN II,ANNEXIN-2,CALPACTIN I HEAVY CHAIN,CALPACTIN-1 COMPND 5 HEAVY CHAIN,CHROMOBINDIN-8,LIPOCORTIN II,PLACENTAL ANTICOAGULANT COMPND 6 PROTEIN IV,PAP-IV,PROTEIN I,P36; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ANXA2, ANX2, ANX2L4, CAL1H, LPC2D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CALCIUM BINDING PROTEIN, PROTEIN-PROTEIN COMPLEX, PHOSPHO-MIMICKATION EXPDTA X-RAY DIFFRACTION AUTHOR P.ECSEDI,G.GOGL,B.KISS,L.NYITRAY REVDAT 4 10-JAN-24 5LPX 1 LINK ATOM REVDAT 3 09-AUG-17 5LPX 1 JRNL REVDAT 2 12-JUL-17 5LPX 1 REVDAT 1 05-JUL-17 5LPX 0 JRNL AUTH P.ECSEDI,B.KISS,G.GOGL,L.RADNAI,L.BUDAY,K.KOPRIVANACZ, JRNL AUTH 2 K.LILIOM,I.LEVELES,B.VERTESSY,N.JESZENOI,C.HETENYI, JRNL AUTH 3 G.SCHLOSSER,G.KATONA,L.NYITRAY JRNL TITL REGULATION OF THE EQUILIBRIUM BETWEEN CLOSED AND OPEN JRNL TITL 2 CONFORMATIONS OF ANNEXIN A2 BY N-TERMINAL PHOSPHORYLATION JRNL TITL 3 AND S100A4-BINDING. JRNL REF STRUCTURE V. 25 1195 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28669632 JRNL DOI 10.1016/J.STR.2017.06.001 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0598 - 4.8838 1.00 2857 166 0.1619 0.1896 REMARK 3 2 4.8838 - 3.8770 1.00 2747 118 0.1217 0.1498 REMARK 3 3 3.8770 - 3.3871 1.00 2705 138 0.1323 0.1740 REMARK 3 4 3.3871 - 3.0775 1.00 2663 131 0.1415 0.1822 REMARK 3 5 3.0775 - 2.8569 1.00 2662 144 0.1370 0.1827 REMARK 3 6 2.8569 - 2.6885 1.00 2681 113 0.1393 0.1699 REMARK 3 7 2.6885 - 2.5539 1.00 2641 134 0.1488 0.1843 REMARK 3 8 2.5539 - 2.4427 1.00 2618 141 0.1467 0.2000 REMARK 3 9 2.4427 - 2.3487 1.00 2635 128 0.1419 0.1895 REMARK 3 10 2.3487 - 2.2676 1.00 2628 147 0.1397 0.1683 REMARK 3 11 2.2676 - 2.1967 1.00 2601 154 0.1411 0.1720 REMARK 3 12 2.1967 - 2.1339 1.00 2640 133 0.1427 0.1762 REMARK 3 13 2.1339 - 2.0778 1.00 2603 152 0.1616 0.2132 REMARK 3 14 2.0778 - 2.0271 1.00 2581 138 0.1745 0.1654 REMARK 3 15 2.0271 - 1.9810 1.00 2639 138 0.1873 0.2300 REMARK 3 16 1.9810 - 1.9388 1.00 2596 147 0.2171 0.2281 REMARK 3 17 1.9388 - 1.9000 1.00 2577 140 0.2224 0.2793 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2560 REMARK 3 ANGLE : 1.469 3442 REMARK 3 CHIRALITY : 0.092 382 REMARK 3 PLANARITY : 0.007 444 REMARK 3 DIHEDRAL : 14.453 1000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 116.6659 -29.6560 369.3726 REMARK 3 T TENSOR REMARK 3 T11: 0.4225 T22: 0.4627 REMARK 3 T33: 0.2342 T12: 0.0021 REMARK 3 T13: -0.0062 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 2.0832 L22: 9.6680 REMARK 3 L33: 3.4738 L12: -0.3301 REMARK 3 L13: 0.1115 L23: -0.1123 REMARK 3 S TENSOR REMARK 3 S11: 0.0604 S12: 0.1578 S13: 0.2025 REMARK 3 S21: -0.2777 S22: 0.0209 S23: 0.0852 REMARK 3 S31: -0.2891 S32: -0.1005 S33: -0.1016 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 117.5628 -32.9935 375.1411 REMARK 3 T TENSOR REMARK 3 T11: 0.3356 T22: 0.3765 REMARK 3 T33: 0.1856 T12: 0.0157 REMARK 3 T13: -0.0086 T23: 0.0534 REMARK 3 L TENSOR REMARK 3 L11: 3.2006 L22: 3.3459 REMARK 3 L33: 3.0376 L12: 0.0554 REMARK 3 L13: 0.2357 L23: 0.8187 REMARK 3 S TENSOR REMARK 3 S11: 0.1062 S12: 0.3693 S13: 0.0967 REMARK 3 S21: -0.3282 S22: -0.0751 S23: 0.1045 REMARK 3 S31: 0.0448 S32: -0.2908 S33: -0.0232 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 115.0251 -36.9518 392.1737 REMARK 3 T TENSOR REMARK 3 T11: 0.1900 T22: 0.2479 REMARK 3 T33: 0.1753 T12: -0.0638 REMARK 3 T13: -0.0211 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 0.9484 L22: 1.7512 REMARK 3 L33: 1.9210 L12: -0.1301 REMARK 3 L13: -0.3289 L23: 0.6520 REMARK 3 S TENSOR REMARK 3 S11: 0.0920 S12: 0.0667 S13: -0.0671 REMARK 3 S21: 0.0316 S22: -0.0217 S23: 0.0998 REMARK 3 S31: 0.3556 S32: -0.5091 S33: -0.0845 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 111.3613 -26.0815 405.5162 REMARK 3 T TENSOR REMARK 3 T11: 0.1573 T22: 0.3143 REMARK 3 T33: 0.2443 T12: -0.0034 REMARK 3 T13: 0.0359 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 2.3014 L22: 1.4402 REMARK 3 L33: 4.3483 L12: 0.4197 REMARK 3 L13: 1.4920 L23: 1.0920 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0910 S13: 0.1664 REMARK 3 S21: -0.0484 S22: -0.0988 S23: 0.3603 REMARK 3 S31: 0.1648 S32: -0.7170 S33: 0.0833 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 127.2245 -24.7846 419.0404 REMARK 3 T TENSOR REMARK 3 T11: 0.2469 T22: 0.2255 REMARK 3 T33: 0.2435 T12: -0.0120 REMARK 3 T13: -0.0214 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 2.3951 L22: 2.3631 REMARK 3 L33: 2.6753 L12: 1.0417 REMARK 3 L13: 0.8244 L23: 0.7331 REMARK 3 S TENSOR REMARK 3 S11: 0.1695 S12: -0.2555 S13: -0.0321 REMARK 3 S21: 0.3486 S22: -0.1144 S23: -0.1389 REMARK 3 S31: 0.2918 S32: -0.1384 S33: -0.0595 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 131.5770 -36.9446 399.8604 REMARK 3 T TENSOR REMARK 3 T11: 0.1919 T22: 0.1964 REMARK 3 T33: 0.2118 T12: -0.0263 REMARK 3 T13: -0.0166 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 1.6727 L22: 6.8004 REMARK 3 L33: 2.2633 L12: -1.9936 REMARK 3 L13: 0.0235 L23: 3.1358 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: -0.0837 S13: -0.0550 REMARK 3 S21: 0.2892 S22: 0.0233 S23: -0.2029 REMARK 3 S31: 0.1784 S32: -0.1346 S33: -0.0952 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): 132.8578 -34.5610 390.6215 REMARK 3 T TENSOR REMARK 3 T11: 0.2058 T22: 0.2382 REMARK 3 T33: 0.2435 T12: 0.0067 REMARK 3 T13: 0.0125 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 2.0204 L22: 1.7124 REMARK 3 L33: 1.9997 L12: -0.2765 REMARK 3 L13: 0.6890 L23: 0.0286 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: 0.1838 S13: 0.0820 REMARK 3 S21: -0.0957 S22: -0.0426 S23: -0.2772 REMARK 3 S31: 0.0201 S32: 0.1869 S33: -0.0414 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1200001180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47503 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.18 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11200 REMARK 200 FOR THE DATA SET : 19.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2HYW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6, 0.2 M AMMONIUM REMARK 280 ACETATE, 5% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.38000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 91.04500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.38000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 91.04500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 914 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ACE A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 VAL A 4 REMARK 465 HIS A 5 REMARK 465 GLU A 6 REMARK 465 ILE A 7 REMARK 465 LEU A 8 REMARK 465 CYS A 9 REMARK 465 LYS A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 LEU A 13 REMARK 465 GLU A 14 REMARK 465 GLY A 15 REMARK 465 ASP A 16 REMARK 465 HIS A 17 REMARK 465 SER A 18 REMARK 465 THR A 19 REMARK 465 PRO A 20 REMARK 465 PRO A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 TYR A 24 REMARK 465 GLY A 25 REMARK 465 GLU A 26 REMARK 465 VAL A 27 REMARK 465 LYS A 28 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 LYS A 206 CE NZ REMARK 470 LYS A 329 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 230 O HOH A 501 1.71 REMARK 500 O HOH A 664 O HOH A 903 1.92 REMARK 500 OD2 ASP A 230 O HOH A 502 1.94 REMARK 500 O HOH A 514 O HOH A 820 1.96 REMARK 500 OE1 GLU A 125 O HOH A 503 1.98 REMARK 500 O HOH A 817 O HOH A 864 2.01 REMARK 500 OD2 ASP A 230 O HOH A 504 2.03 REMARK 500 O HOH A 578 O HOH A 735 2.03 REMARK 500 O HOH A 824 O HOH A 841 2.04 REMARK 500 O HOH A 835 O HOH A 841 2.04 REMARK 500 OD2 ASP A 230 O HOH A 505 2.04 REMARK 500 O HOH A 620 O HOH A 859 2.05 REMARK 500 O HOH A 773 O HOH A 880 2.06 REMARK 500 O HOH A 667 O HOH A 928 2.06 REMARK 500 O HOH A 802 O HOH A 903 2.07 REMARK 500 O HOH A 852 O HOH A 859 2.09 REMARK 500 O HOH A 674 O HOH A 841 2.12 REMARK 500 O HOH A 515 O HOH A 877 2.12 REMARK 500 OD1 ASP A 154 O HOH A 506 2.12 REMARK 500 O HOH A 598 O HOH A 928 2.13 REMARK 500 O HOH A 747 O HOH A 847 2.14 REMARK 500 O HOH A 655 O HOH A 945 2.15 REMARK 500 O HOH A 725 O HOH A 918 2.15 REMARK 500 NH1 ARG A 309 O HOH A 507 2.15 REMARK 500 O HOH A 534 O HOH A 820 2.15 REMARK 500 O HOH A 696 O HOH A 735 2.16 REMARK 500 O HOH A 897 O HOH A 935 2.17 REMARK 500 O HOH A 515 O HOH A 770 2.18 REMARK 500 O HOH A 510 O HOH A 921 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 501 O HOH A 694 31059 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 168 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 168 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 51 128.12 72.10 REMARK 500 ASN A 265 94.13 -162.23 REMARK 500 VAL A 298 -62.92 -106.68 REMARK 500 ASP A 299 32.11 -146.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 50 O REMARK 620 2 VAL A 51 O 73.4 REMARK 620 3 GLU A 53 OE1 87.5 86.6 REMARK 620 4 GLU A 53 OE2 131.3 76.4 53.3 REMARK 620 5 HOH A 722 O 124.5 73.9 133.4 80.8 REMARK 620 6 HOH A 799 O 76.9 145.1 74.1 111.7 139.8 REMARK 620 7 HOH A 842 O 136.3 149.9 97.6 82.3 81.9 63.2 REMARK 620 8 HOH A 850 O 84.5 105.8 162.6 140.8 63.2 89.0 77.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 88 O REMARK 620 2 LEU A 91 O 91.6 REMARK 620 3 GLU A 96 OE1 100.0 82.7 REMARK 620 4 HOH A 801 O 91.2 160.1 77.4 REMARK 620 5 HOH A 813 O 97.5 80.7 156.1 118.4 REMARK 620 6 HOH A 863 O 170.4 95.0 87.8 85.0 76.7 REMARK 620 7 HOH A 885 O 83.6 141.0 136.3 58.9 61.7 86.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 118 O REMARK 620 2 GLY A 120 O 91.0 REMARK 620 3 GLY A 122 O 98.1 82.7 REMARK 620 4 ASP A 162 OD1 88.8 142.4 134.5 REMARK 620 5 ASP A 162 OD2 86.8 166.5 84.5 51.0 REMARK 620 6 HOH A 536 O 176.9 91.7 83.7 88.2 90.9 REMARK 620 7 HOH A 699 O 83.4 75.6 158.2 67.0 117.3 95.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 202 O REMARK 620 2 ARG A 205 O 80.8 REMARK 620 3 GLY A 207 O 96.7 83.0 REMARK 620 4 GLU A 247 OE1 82.9 155.7 81.1 REMARK 620 5 GLU A 247 OE2 81.9 140.4 134.4 53.3 REMARK 620 6 HOH A 715 O 100.4 73.9 148.5 127.0 74.6 REMARK 620 7 HOH A 840 O 168.3 110.4 88.0 87.3 87.2 80.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 234 OG REMARK 620 2 MET A 278 O 17.5 REMARK 620 3 GLY A 280 O 76.1 91.4 REMARK 620 4 GLY A 282 O 102.4 113.7 81.8 REMARK 620 5 ASP A 322 OD1 98.0 80.5 155.2 122.9 REMARK 620 6 ASP A 322 OD2 92.4 83.1 150.5 74.1 52.1 REMARK 620 7 HOH A 718 O 4.2 19.2 73.1 104.5 99.6 96.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5LPU RELATED DB: PDB DBREF 5LPX A 2 339 UNP P07355 ANXA2_HUMAN 2 339 SEQADV 5LPX ACE A 1 UNP P07355 ACETYLATION SEQADV 5LPX GLU A 26 UNP P07355 SER 26 ENGINEERED MUTATION SEQADV 5LPX GLU A 66 UNP P07355 ALA 66 ENGINEERED MUTATION SEQRES 1 A 339 ACE SER THR VAL HIS GLU ILE LEU CYS LYS LEU SER LEU SEQRES 2 A 339 GLU GLY ASP HIS SER THR PRO PRO SER ALA TYR GLY GLU SEQRES 3 A 339 VAL LYS ALA TYR THR ASN PHE ASP ALA GLU ARG ASP ALA SEQRES 4 A 339 LEU ASN ILE GLU THR ALA ILE LYS THR LYS GLY VAL ASP SEQRES 5 A 339 GLU VAL THR ILE VAL ASN ILE LEU THR ASN ARG SER ASN SEQRES 6 A 339 GLU GLN ARG GLN ASP ILE ALA PHE ALA TYR GLN ARG ARG SEQRES 7 A 339 THR LYS LYS GLU LEU ALA SER ALA LEU LYS SER ALA LEU SEQRES 8 A 339 SER GLY HIS LEU GLU THR VAL ILE LEU GLY LEU LEU LYS SEQRES 9 A 339 THR PRO ALA GLN TYR ASP ALA SER GLU LEU LYS ALA SER SEQRES 10 A 339 MET LYS GLY LEU GLY THR ASP GLU ASP SER LEU ILE GLU SEQRES 11 A 339 ILE ILE CYS SER ARG THR ASN GLN GLU LEU GLN GLU ILE SEQRES 12 A 339 ASN ARG VAL TYR LYS GLU MET TYR LYS THR ASP LEU GLU SEQRES 13 A 339 LYS ASP ILE ILE SER ASP THR SER GLY ASP PHE ARG LYS SEQRES 14 A 339 LEU MET VAL ALA LEU ALA LYS GLY ARG ARG ALA GLU ASP SEQRES 15 A 339 GLY SER VAL ILE ASP TYR GLU LEU ILE ASP GLN ASP ALA SEQRES 16 A 339 ARG ASP LEU TYR ASP ALA GLY VAL LYS ARG LYS GLY THR SEQRES 17 A 339 ASP VAL PRO LYS TRP ILE SER ILE MET THR GLU ARG SER SEQRES 18 A 339 VAL PRO HIS LEU GLN LYS VAL PHE ASP ARG TYR LYS SER SEQRES 19 A 339 TYR SER PRO TYR ASP MET LEU GLU SER ILE ARG LYS GLU SEQRES 20 A 339 VAL LYS GLY ASP LEU GLU ASN ALA PHE LEU ASN LEU VAL SEQRES 21 A 339 GLN CYS ILE GLN ASN LYS PRO LEU TYR PHE ALA ASP ARG SEQRES 22 A 339 LEU TYR ASP SER MET LYS GLY LYS GLY THR ARG ASP LYS SEQRES 23 A 339 VAL LEU ILE ARG ILE MET VAL SER ARG SER GLU VAL ASP SEQRES 24 A 339 MET LEU LYS ILE ARG SER GLU PHE LYS ARG LYS TYR GLY SEQRES 25 A 339 LYS SER LEU TYR TYR TYR ILE GLN GLN ASP THR LYS GLY SEQRES 26 A 339 ASP TYR GLN LYS ALA LEU LEU TYR LEU CYS GLY GLY ASP SEQRES 27 A 339 ASP HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET GOL A 406 6 HET GOL A 407 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA 5(CA 2+) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 HOH *480(H2 O) HELIX 1 AA1 THR A 31 THR A 48 1 18 HELIX 2 AA2 ASP A 52 THR A 61 1 10 HELIX 3 AA3 SER A 64 LYS A 80 1 17 HELIX 4 AA4 GLU A 82 LEU A 91 1 10 HELIX 5 AA5 SER A 92 LYS A 104 1 13 HELIX 6 AA6 THR A 105 LYS A 119 1 15 HELIX 7 AA7 ASP A 124 ARG A 135 1 12 HELIX 8 AA8 THR A 136 LYS A 152 1 17 HELIX 9 AA9 ASP A 154 THR A 163 1 10 HELIX 10 AB1 SER A 164 LYS A 176 1 13 HELIX 11 AB2 ASP A 187 GLY A 202 1 16 HELIX 12 AB3 ASP A 209 ARG A 220 1 12 HELIX 13 AB4 SER A 221 SER A 236 1 16 HELIX 14 AB5 ASP A 239 VAL A 248 1 10 HELIX 15 AB6 LYS A 249 ASN A 265 1 17 HELIX 16 AB7 ASN A 265 LYS A 279 1 15 HELIX 17 AB8 ARG A 284 SER A 296 1 13 HELIX 18 AB9 ASP A 299 GLY A 312 1 14 HELIX 19 AC1 SER A 314 THR A 323 1 10 HELIX 20 AC2 LYS A 324 GLY A 336 1 13 LINK O GLY A 50 CA CA A 401 1555 1555 2.46 LINK O VAL A 51 CA CA A 401 1555 1555 2.43 LINK OE1 GLU A 53 CA CA A 401 1555 1555 2.54 LINK OE2 GLU A 53 CA CA A 401 1555 1555 2.38 LINK O LYS A 88 CA CA A 402 1555 1555 2.40 LINK O LEU A 91 CA CA A 402 1555 1555 2.41 LINK OE1 GLU A 96 CA CA A 402 1555 1555 2.41 LINK O MET A 118 CA CA A 403 1555 1555 2.36 LINK O GLY A 120 CA CA A 403 1555 1555 2.45 LINK O GLY A 122 CA CA A 403 1555 1555 2.39 LINK OD1 ASP A 162 CA CA A 403 1555 1555 2.66 LINK OD2 ASP A 162 CA CA A 403 1555 1555 2.48 LINK O GLY A 202 CA CA A 404 1555 1555 2.37 LINK O ARG A 205 CA CA A 404 1555 1555 2.35 LINK O GLY A 207 CA CA A 404 1555 1555 2.32 LINK OG SER A 234 CA CA A 405 1555 31059 40.99 LINK OE1 GLU A 247 CA CA A 404 1555 1555 2.42 LINK OE2 GLU A 247 CA CA A 404 1555 1555 2.53 LINK O MET A 278 CA CA A 405 1555 1555 2.40 LINK O GLY A 280 CA CA A 405 1555 1555 2.42 LINK O GLY A 282 CA CA A 405 1555 1555 2.40 LINK OD1 ASP A 322 CA CA A 405 1555 1555 2.47 LINK OD2 ASP A 322 CA CA A 405 1555 1555 2.48 LINK CA CA A 401 O HOH A 722 1555 1555 2.39 LINK CA CA A 401 O HOH A 799 1555 1555 2.54 LINK CA CA A 401 O HOH A 842 1555 1555 2.59 LINK CA CA A 401 O HOH A 850 1555 1555 2.56 LINK CA CA A 402 O HOH A 801 1555 1555 2.49 LINK CA CA A 402 O HOH A 813 1555 1555 2.51 LINK CA CA A 402 O HOH A 863 1555 1555 2.62 LINK CA CA A 402 O HOH A 885 1555 1555 3.06 LINK CA CA A 403 O HOH A 536 1555 1555 2.50 LINK CA CA A 403 O HOH A 699 1555 1555 2.51 LINK CA CA A 404 O HOH A 715 1555 1555 2.45 LINK CA CA A 404 O HOH A 840 1555 1555 2.38 LINK CA CA A 405 O HOH A 718 1555 31049 41.27 SITE 1 AC1 7 GLY A 50 VAL A 51 GLU A 53 HOH A 722 SITE 2 AC1 7 HOH A 799 HOH A 842 HOH A 850 SITE 1 AC2 7 LYS A 88 LEU A 91 GLU A 96 HOH A 801 SITE 2 AC2 7 HOH A 813 HOH A 863 HOH A 885 SITE 1 AC3 6 MET A 118 GLY A 120 GLY A 122 ASP A 162 SITE 2 AC3 6 HOH A 536 HOH A 699 SITE 1 AC4 6 GLY A 202 ARG A 205 GLY A 207 GLU A 247 SITE 2 AC4 6 HOH A 715 HOH A 840 SITE 1 AC5 4 MET A 278 GLY A 280 GLY A 282 ASP A 322 SITE 1 AC6 7 CYS A 133 SER A 134 ARG A 135 ARG A 179 SITE 2 AC6 7 LYS A 266 HOH A 532 HOH A 629 SITE 1 AC7 9 ALA A 180 GLU A 181 GLY A 183 ARG A 220 SITE 2 AC7 9 SER A 221 HIS A 224 HOH A 512 HOH A 528 SITE 3 AC7 9 HOH A 585 CRYST1 54.950 58.760 182.090 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018198 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005492 0.00000