HEADER CELL CYCLE 02-SEP-16 5LSK TITLE CRYSTAL STRUCTURE OF THE HUMAN KINETOCHORE MIS12-CENP-C COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN MIS12 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: POLYAMINE-MODULATED FACTOR 1; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: UNP RESIDUES 31-205; COMPND 9 SYNONYM: PMF-1; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: KINETOCHORE-ASSOCIATED PROTEIN DSN1 HOMOLOG; COMPND 13 CHAIN: D; COMPND 14 FRAGMENT: UNP RESIDUES 68-356; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: KINETOCHORE-ASSOCIATED PROTEIN NSL1 HOMOLOG; COMPND 18 CHAIN: N; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: CENTROMERE PROTEIN C; COMPND 22 CHAIN: P; COMPND 23 SYNONYM: CENP-C,CENTROMERE AUTOANTIGEN C,CENTROMERE PROTEIN C 1,CENP- COMPND 24 C 1,INTERPHASE CENTROMERE COMPLEX PROTEIN 7; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MIS12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODON-PLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PST39; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: PMF1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: CODON-PLUS-RIL; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PST39; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: DSN1, C20ORF172, MIS13; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 28 EXPRESSION_SYSTEM_VARIANT: CODON-PLUS-RIL; SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PST39; SOURCE 31 MOL_ID: 4; SOURCE 32 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 33 ORGANISM_COMMON: HUMAN; SOURCE 34 ORGANISM_TAXID: 9606; SOURCE 35 GENE: NSL1, C1ORF48, DC31, DC8, MIS14; SOURCE 36 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 37 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 38 EXPRESSION_SYSTEM_VARIANT: CODON-PLUS-RIL; SOURCE 39 EXPRESSION_SYSTEM_VECTOR_TYPE: PST39; SOURCE 40 MOL_ID: 5; SOURCE 41 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 42 ORGANISM_COMMON: HUMAN; SOURCE 43 ORGANISM_TAXID: 9606; SOURCE 44 GENE: CENPC, CENPC1, ICEN7; SOURCE 45 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 46 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 47 EXPRESSION_SYSTEM_VARIANT: CODON-PLUS-RIL; SOURCE 48 EXPRESSION_SYSTEM_VECTOR_TYPE: PST39 KEYWDS ALPHA-HELICAL, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR I.R.VETTER,A.PETROVIC,J.KELLER,Y.LIU REVDAT 3 11-OCT-17 5LSK 1 REMARK REVDAT 2 07-DEC-16 5LSK 1 JRNL REVDAT 1 16-NOV-16 5LSK 0 JRNL AUTH A.PETROVIC,J.KELLER,Y.LIU,K.OVERLACK,J.JOHN,Y.N.DIMITROVA, JRNL AUTH 2 S.JENNI,S.VAN GERWEN,P.STEGE,S.WOHLGEMUTH,P.ROMBAUT, JRNL AUTH 3 F.HERZOG,S.C.HARRISON,I.R.VETTER,A.MUSACCHIO JRNL TITL STRUCTURE OF THE MIS12 COMPLEX AND MOLECULAR BASIS OF ITS JRNL TITL 2 INTERACTION WITH CENP-C AT HUMAN KINETOCHORES. JRNL REF CELL V. 167 1028 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27881301 JRNL DOI 10.1016/J.CELL.2016.10.005 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.7 REMARK 3 NUMBER OF REFLECTIONS : 14170 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7426 - 5.9451 1.00 3245 166 0.1934 0.2286 REMARK 3 2 5.9451 - 4.7403 1.00 3197 184 0.2679 0.3038 REMARK 3 3 4.7403 - 4.1474 1.00 3184 168 0.2536 0.3334 REMARK 3 4 4.1474 - 3.7711 0.80 2553 125 0.2796 0.3735 REMARK 3 5 3.7711 - 3.5024 0.40 1279 69 0.3194 0.3492 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.500 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 98.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6282 REMARK 3 ANGLE : 0.630 8443 REMARK 3 CHIRALITY : 0.037 937 REMARK 3 PLANARITY : 0.003 1100 REMARK 3 DIHEDRAL : 18.302 3909 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LSK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001288. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6-8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97863 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16932 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 19.742 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.760 REMARK 200 R MERGE (I) : 0.18100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.95600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6-12% PEG6000, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.00500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.34500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.00500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 56.34500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -264.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, N, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 201 REMARK 465 LEU A 202 REMARK 465 LYS A 203 REMARK 465 ILE A 204 REMARK 465 SER A 205 REMARK 465 MET B 30 REMARK 465 PRO B 204 REMARK 465 GLU B 205 REMARK 465 MET D 67 REMARK 465 SER D 68 REMARK 465 HIS D 69 REMARK 465 GLN D 70 REMARK 465 GLU D 71 REMARK 465 ARG D 72 REMARK 465 LEU D 73 REMARK 465 GLN D 74 REMARK 465 SER D 75 REMARK 465 LYS D 76 REMARK 465 SER D 77 REMARK 465 LEU D 78 REMARK 465 HIS D 79 REMARK 465 LEU D 80 REMARK 465 SER D 81 REMARK 465 PRO D 82 REMARK 465 GLN D 83 REMARK 465 GLU D 84 REMARK 465 GLN D 85 REMARK 465 SER D 86 REMARK 465 ALA D 87 REMARK 465 SER D 88 REMARK 465 TYR D 89 REMARK 465 GLN D 90 REMARK 465 ASP D 91 REMARK 465 ARG D 92 REMARK 465 ARG D 93 REMARK 465 GLN D 94 REMARK 465 SER D 95 REMARK 465 TRP D 96 REMARK 465 ARG D 97 REMARK 465 ARG D 98 REMARK 465 ALA D 99 REMARK 465 SER D 100 REMARK 465 MET D 101 REMARK 465 LYS D 102 REMARK 465 GLU D 103 REMARK 465 THR D 104 REMARK 465 ASN D 105 REMARK 465 ARG D 106 REMARK 465 ARG D 107 REMARK 465 LYS D 108 REMARK 465 SER D 109 REMARK 465 LEU D 110 REMARK 465 HIS D 111 REMARK 465 PRO D 112 REMARK 465 ILE D 113 REMARK 465 HIS D 114 REMARK 465 GLN D 115 REMARK 465 THR D 156 REMARK 465 LYS D 157 REMARK 465 GLY D 158 REMARK 465 ASP D 194 REMARK 465 SER D 195 REMARK 465 ASN D 196 REMARK 465 GLY D 197 REMARK 465 LYS D 198 REMARK 465 ALA D 199 REMARK 465 SER D 200 REMARK 465 ASP D 201 REMARK 465 PHE D 202 REMARK 465 GLU D 246 REMARK 465 ALA D 247 REMARK 465 LYS D 248 REMARK 465 ILE D 249 REMARK 465 THR D 250 REMARK 465 GLU D 251 REMARK 465 VAL D 252 REMARK 465 LYS D 253 REMARK 465 VAL D 254 REMARK 465 GLU D 255 REMARK 465 PRO D 256 REMARK 465 MET D 257 REMARK 465 VAL D 318 REMARK 465 GLN D 319 REMARK 465 LEU D 320 REMARK 465 GLY D 321 REMARK 465 LYS D 322 REMARK 465 ARG D 323 REMARK 465 SER D 324 REMARK 465 MET D 325 REMARK 465 GLN D 326 REMARK 465 GLN D 327 REMARK 465 LEU D 328 REMARK 465 ASP D 329 REMARK 465 PRO D 330 REMARK 465 SER D 331 REMARK 465 PRO D 332 REMARK 465 ALA D 333 REMARK 465 ARG D 334 REMARK 465 LYS D 335 REMARK 465 LEU D 336 REMARK 465 LEU D 337 REMARK 465 LYS D 338 REMARK 465 LEU D 339 REMARK 465 GLN D 340 REMARK 465 LEU D 341 REMARK 465 GLN D 342 REMARK 465 ASN D 343 REMARK 465 PRO D 344 REMARK 465 PRO D 345 REMARK 465 ALA D 346 REMARK 465 ILE D 347 REMARK 465 HIS D 348 REMARK 465 GLY D 349 REMARK 465 SER D 350 REMARK 465 GLY D 351 REMARK 465 SER D 352 REMARK 465 GLY D 353 REMARK 465 SER D 354 REMARK 465 CYS D 355 REMARK 465 GLN D 356 REMARK 465 HIS D 357 REMARK 465 HIS D 358 REMARK 465 HIS D 359 REMARK 465 HIS D 360 REMARK 465 HIS D 361 REMARK 465 HIS D 362 REMARK 465 MET N 1 REMARK 465 ALA N 2 REMARK 465 GLY N 3 REMARK 465 SER N 4 REMARK 465 PRO N 5 REMARK 465 GLU N 6 REMARK 465 LEU N 7 REMARK 465 VAL N 8 REMARK 465 VAL N 9 REMARK 465 LEU N 10 REMARK 465 ASP N 11 REMARK 465 PRO N 12 REMARK 465 PRO N 13 REMARK 465 TRP N 14 REMARK 465 ASP N 15 REMARK 465 LYS N 16 REMARK 465 GLU N 17 REMARK 465 LEU N 18 REMARK 465 ALA N 19 REMARK 465 ALA N 20 REMARK 465 GLY N 21 REMARK 465 THR N 22 REMARK 465 GLU N 23 REMARK 465 SER N 24 REMARK 465 GLN N 25 REMARK 465 ALA N 26 REMARK 465 LEU N 27 REMARK 465 VAL N 28 REMARK 465 SER N 29 REMARK 465 ALA N 30 REMARK 465 THR N 31 REMARK 465 LEU N 205 REMARK 465 ARG N 206 REMARK 465 GLY P -4 REMARK 465 PRO P -3 REMARK 465 LEU P -2 REMARK 465 GLY P -1 REMARK 465 SER P 0 REMARK 465 MET P 1 REMARK 465 ALA P 2 REMARK 465 ALA P 3 REMARK 465 SER P 4 REMARK 465 GLY P 5 REMARK 465 ALA P 23 REMARK 465 ARG P 24 REMARK 465 ASP P 25 REMARK 465 ILE P 26 REMARK 465 ASN P 27 REMARK 465 ASN P 49 REMARK 465 ASP P 50 REMARK 465 PHE P 51 REMARK 465 SER P 52 REMARK 465 THR P 53 REMARK 465 ASN P 54 REMARK 465 SER P 55 REMARK 465 THR P 56 REMARK 465 LYS P 57 REMARK 465 SER P 58 REMARK 465 VAL P 59 REMARK 465 PRO P 60 REMARK 465 ASN P 61 REMARK 465 SER P 62 REMARK 465 THR P 63 REMARK 465 ARG P 64 REMARK 465 LYS P 65 REMARK 465 ILE P 66 REMARK 465 LYS P 67 REMARK 465 ASP P 68 REMARK 465 THR P 69 REMARK 465 CYS P 70 REMARK 465 ILE P 71 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 3 83.15 32.07 REMARK 500 ASP A 52 -158.75 58.09 REMARK 500 ILE A 55 66.51 36.76 REMARK 500 SER A 56 170.21 175.32 REMARK 500 PRO A 94 5.14 -69.66 REMARK 500 SER A 95 -20.74 65.23 REMARK 500 HIS A 169 -2.68 81.62 REMARK 500 PHE A 174 38.41 -75.56 REMARK 500 TYR B 62 46.78 -81.05 REMARK 500 LYS B 63 -74.72 -56.69 REMARK 500 CYS B 64 -38.31 -25.02 REMARK 500 GLN B 69 69.37 36.64 REMARK 500 PRO B 70 0.92 -64.90 REMARK 500 LYS B 119 -7.18 63.15 REMARK 500 SER D 125 76.45 58.18 REMARK 500 LEU D 128 56.25 -100.51 REMARK 500 ALA D 129 -137.76 62.66 REMARK 500 GLU D 130 -35.01 -133.09 REMARK 500 PRO D 151 8.82 -63.76 REMARK 500 GLN D 264 31.38 -97.12 REMARK 500 GLU N 34 -163.25 -104.39 REMARK 500 ILE N 90 -75.82 -70.55 REMARK 500 VAL N 155 83.15 33.78 REMARK 500 LEU N 158 -154.60 63.42 REMARK 500 ASP N 159 66.09 37.47 REMARK 500 LYS N 161 -169.34 68.46 REMARK 500 PRO N 166 -138.09 -78.03 REMARK 500 GLN N 203 -85.78 -117.51 REMARK 500 TYR P 13 86.39 37.03 REMARK 500 CYS P 18 84.74 58.31 REMARK 500 SER P 21 -154.52 -113.58 REMARK 500 GLU P 29 -143.40 -78.49 REMARK 500 GLN P 30 101.56 -58.85 REMARK 500 VAL P 34 -1.50 56.89 REMARK 500 GLU P 44 -86.82 -104.96 REMARK 500 SER P 46 140.23 -173.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE D 124 SER D 125 144.97 REMARK 500 REMARK 500 REMARK: NULL DBREF 5LSK A 1 205 UNP Q9H081 MIS12_HUMAN 1 205 DBREF 5LSK B 31 205 UNP Q6P1K2 PMF1_HUMAN 31 205 DBREF 5LSK D 68 356 UNP Q9H410 DSN1_HUMAN 68 356 DBREF 5LSK N 1 206 UNP Q96IY1 NSL1_HUMAN 1 206 DBREF 5LSK P 1 71 UNP Q03188 CENPC_HUMAN 1 71 SEQADV 5LSK MET B 30 UNP Q6P1K2 INITIATING METHIONINE SEQADV 5LSK MET D 67 UNP Q9H410 INITIATING METHIONINE SEQADV 5LSK HIS D 357 UNP Q9H410 EXPRESSION TAG SEQADV 5LSK HIS D 358 UNP Q9H410 EXPRESSION TAG SEQADV 5LSK HIS D 359 UNP Q9H410 EXPRESSION TAG SEQADV 5LSK HIS D 360 UNP Q9H410 EXPRESSION TAG SEQADV 5LSK HIS D 361 UNP Q9H410 EXPRESSION TAG SEQADV 5LSK HIS D 362 UNP Q9H410 EXPRESSION TAG SEQADV 5LSK GLY P -4 UNP Q03188 EXPRESSION TAG SEQADV 5LSK PRO P -3 UNP Q03188 EXPRESSION TAG SEQADV 5LSK LEU P -2 UNP Q03188 EXPRESSION TAG SEQADV 5LSK GLY P -1 UNP Q03188 EXPRESSION TAG SEQADV 5LSK SER P 0 UNP Q03188 EXPRESSION TAG SEQRES 1 A 205 MET SER VAL ASP PRO MET THR TYR GLU ALA GLN PHE PHE SEQRES 2 A 205 GLY PHE THR PRO GLN THR CYS MET LEU ARG ILE TYR ILE SEQRES 3 A 205 ALA PHE GLN ASP TYR LEU PHE GLU VAL MET GLN ALA VAL SEQRES 4 A 205 GLU GLN VAL ILE LEU LYS LYS LEU ASP GLY ILE PRO ASP SEQRES 5 A 205 CYS ASP ILE SER PRO VAL GLN ILE ARG LYS CYS THR GLU SEQRES 6 A 205 LYS PHE LEU CYS PHE MET LYS GLY HIS PHE ASP ASN LEU SEQRES 7 A 205 PHE SER LYS MET GLU GLN LEU PHE LEU GLN LEU ILE LEU SEQRES 8 A 205 ARG ILE PRO SER ASN ILE LEU LEU PRO GLU ASP LYS CYS SEQRES 9 A 205 LYS GLU THR PRO TYR SER GLU GLU ASP PHE GLN HIS LEU SEQRES 10 A 205 GLN LYS GLU ILE GLU GLN LEU GLN GLU LYS TYR LYS THR SEQRES 11 A 205 GLU LEU CYS THR LYS GLN ALA LEU LEU ALA GLU LEU GLU SEQRES 12 A 205 GLU GLN LYS ILE VAL GLN ALA LYS LEU LYS GLN THR LEU SEQRES 13 A 205 THR PHE PHE ASP GLU LEU HIS ASN VAL GLY ARG ASP HIS SEQRES 14 A 205 GLY THR SER ASP PHE ARG GLU SER LEU VAL SER LEU VAL SEQRES 15 A 205 GLN ASN SER ARG LYS LEU GLN ASN ILE ARG ASP ASN VAL SEQRES 16 A 205 GLU LYS GLU SER LYS ARG LEU LYS ILE SER SEQRES 1 B 176 MET THR ILE SER ARG VAL LYS LEU LEU ASP THR MET VAL SEQRES 2 B 176 ASP THR PHE LEU GLN LYS LEU VAL ALA ALA GLY SER TYR SEQRES 3 B 176 GLN ARG PHE THR ASP CYS TYR LYS CYS PHE TYR GLN LEU SEQRES 4 B 176 GLN PRO ALA MET THR GLN GLN ILE TYR ASP LYS PHE ILE SEQRES 5 B 176 ALA GLN LEU GLN THR SER ILE ARG GLU GLU ILE SER ASP SEQRES 6 B 176 ILE LYS GLU GLU GLY ASN LEU GLU ALA VAL LEU ASN ALA SEQRES 7 B 176 LEU ASP LYS ILE VAL GLU GLU GLY LYS VAL ARG LYS GLU SEQRES 8 B 176 PRO ALA TRP ARG PRO SER GLY ILE PRO GLU LYS ASP LEU SEQRES 9 B 176 HIS SER VAL MET ALA PRO TYR PHE LEU GLN GLN ARG ASP SEQRES 10 B 176 THR LEU ARG ARG HIS VAL GLN LYS GLN GLU ALA GLU ASN SEQRES 11 B 176 GLN GLN LEU ALA ASP ALA VAL LEU ALA GLY ARG ARG GLN SEQRES 12 B 176 VAL GLU GLU LEU GLN LEU GLN VAL GLN ALA GLN GLN GLN SEQRES 13 B 176 ALA TRP GLN ALA LEU HIS ARG GLU GLN ARG GLU LEU VAL SEQRES 14 B 176 ALA VAL LEU ARG GLU PRO GLU SEQRES 1 D 296 MET SER HIS GLN GLU ARG LEU GLN SER LYS SER LEU HIS SEQRES 2 D 296 LEU SER PRO GLN GLU GLN SER ALA SER TYR GLN ASP ARG SEQRES 3 D 296 ARG GLN SER TRP ARG ARG ALA SER MET LYS GLU THR ASN SEQRES 4 D 296 ARG ARG LYS SER LEU HIS PRO ILE HIS GLN GLY ILE THR SEQRES 5 D 296 GLU LEU SER ARG SER ILE SER VAL ASP LEU ALA GLU SER SEQRES 6 D 296 LYS ARG LEU GLY CYS LEU LEU LEU SER SER PHE GLN PHE SEQRES 7 D 296 SER ILE GLN LYS LEU GLU PRO PHE LEU ARG ASP THR LYS SEQRES 8 D 296 GLY PHE SER LEU GLU SER PHE ARG ALA LYS ALA SER SER SEQRES 9 D 296 LEU SER GLU GLU LEU LYS HIS PHE ALA ASP GLY LEU GLU SEQRES 10 D 296 THR ASP GLY THR LEU GLN LYS CYS PHE GLU ASP SER ASN SEQRES 11 D 296 GLY LYS ALA SER ASP PHE SER LEU GLU ALA SER VAL ALA SEQRES 12 D 296 GLU MET LYS GLU TYR ILE THR LYS PHE SER LEU GLU ARG SEQRES 13 D 296 GLN THR TRP ASP GLN LEU LEU LEU HIS TYR GLN GLN GLU SEQRES 14 D 296 ALA LYS GLU ILE LEU SER ARG GLY SER THR GLU ALA LYS SEQRES 15 D 296 ILE THR GLU VAL LYS VAL GLU PRO MET THR TYR LEU GLY SEQRES 16 D 296 SER SER GLN ASN GLU VAL LEU ASN THR LYS PRO ASP TYR SEQRES 17 D 296 GLN LYS ILE LEU GLN ASN GLN SER LYS VAL PHE ASP CYS SEQRES 18 D 296 MET GLU LEU VAL MET ASP GLU LEU GLN GLY SER VAL LYS SEQRES 19 D 296 GLN LEU GLN ALA PHE MET ASP GLU SER THR GLN CYS PHE SEQRES 20 D 296 GLN LYS VAL SER VAL GLN LEU GLY LYS ARG SER MET GLN SEQRES 21 D 296 GLN LEU ASP PRO SER PRO ALA ARG LYS LEU LEU LYS LEU SEQRES 22 D 296 GLN LEU GLN ASN PRO PRO ALA ILE HIS GLY SER GLY SER SEQRES 23 D 296 GLY SER CYS GLN HIS HIS HIS HIS HIS HIS SEQRES 1 N 206 MET ALA GLY SER PRO GLU LEU VAL VAL LEU ASP PRO PRO SEQRES 2 N 206 TRP ASP LYS GLU LEU ALA ALA GLY THR GLU SER GLN ALA SEQRES 3 N 206 LEU VAL SER ALA THR PRO ARG GLU ASP PHE ARG VAL ARG SEQRES 4 N 206 CYS THR SER LYS ARG ALA VAL THR GLU MET LEU GLN LEU SEQRES 5 N 206 CYS GLY ARG PHE VAL GLN LYS LEU GLY ASP ALA LEU PRO SEQRES 6 N 206 GLU GLU ILE ARG GLU PRO ALA LEU ARG ASP ALA GLN TRP SEQRES 7 N 206 THR PHE GLU SER ALA VAL GLN GLU ASN ILE SER ILE ASN SEQRES 8 N 206 GLY GLN ALA TRP GLN GLU ALA SER ASP ASN CYS PHE MET SEQRES 9 N 206 ASP SER ASP ILE LYS VAL LEU GLU ASP GLN PHE ASP GLU SEQRES 10 N 206 ILE ILE VAL ASP ILE ALA THR LYS ARG LYS GLN TYR PRO SEQRES 11 N 206 ARG LYS ILE LEU GLU CYS VAL ILE LYS THR ILE LYS ALA SEQRES 12 N 206 LYS GLN GLU ILE LEU LYS GLN TYR HIS PRO VAL VAL HIS SEQRES 13 N 206 PRO LEU ASP LEU LYS TYR ASP PRO ASP PRO ALA PRO HIS SEQRES 14 N 206 MET GLU ASN LEU LYS CYS ARG GLY GLU THR VAL ALA LYS SEQRES 15 N 206 GLU ILE SER GLU ALA MET LYS SER LEU PRO ALA LEU ILE SEQRES 16 N 206 GLU GLN GLY GLU GLY PHE SER GLN VAL LEU ARG SEQRES 1 P 76 GLY PRO LEU GLY SER MET ALA ALA SER GLY LEU ASP HIS SEQRES 2 P 76 LEU LYS ASN GLY TYR ARG ARG ARG PHE CYS ARG PRO SER SEQRES 3 P 76 ARG ALA ARG ASP ILE ASN THR GLU GLN GLY GLN ASN VAL SEQRES 4 P 76 LEU GLU ILE LEU GLN ASP CYS PHE GLU GLU LYS SER LEU SEQRES 5 P 76 ALA ASN ASP PHE SER THR ASN SER THR LYS SER VAL PRO SEQRES 6 P 76 ASN SER THR ARG LYS ILE LYS ASP THR CYS ILE FORMUL 6 HOH *6(H2 O) HELIX 1 AA1 TYR A 8 GLY A 14 1 7 HELIX 2 AA2 THR A 16 LYS A 46 1 31 HELIX 3 AA3 PRO A 57 ILE A 90 1 34 HELIX 4 AA4 LEU A 99 THR A 107 5 9 HELIX 5 AA5 SER A 110 ASP A 168 1 59 HELIX 6 AA6 SER A 177 LYS A 197 1 21 HELIX 7 AA7 SER B 33 GLY B 53 1 21 HELIX 8 AA8 SER B 54 CYS B 61 1 8 HELIX 9 AA9 TYR B 62 GLN B 67 1 6 HELIX 10 AB1 ALA B 71 GLU B 97 1 27 HELIX 11 AB2 ASN B 100 LYS B 116 1 17 HELIX 12 AB3 ILE B 128 ALA B 189 1 62 HELIX 13 AB4 ALA B 189 LEU B 201 1 13 HELIX 14 AB5 GLY D 116 SER D 121 5 6 HELIX 15 AB6 GLU D 130 GLU D 150 1 21 HELIX 16 AB7 LEU D 161 GLY D 186 1 26 HELIX 17 AB8 LEU D 188 GLU D 193 5 6 HELIX 18 AB9 LEU D 204 SER D 241 1 38 HELIX 19 AC1 GLN D 264 THR D 270 1 7 HELIX 20 AC2 ASP D 273 PHE D 313 1 41 HELIX 21 AC3 GLN D 314 SER D 317 5 4 HELIX 22 AC4 SER N 42 LEU N 60 1 19 HELIX 23 AC5 GLY N 61 ALA N 63 5 3 HELIX 24 AC6 ILE N 68 ASN N 87 1 20 HELIX 25 AC7 MET N 104 GLN N 150 1 47 HELIX 26 AC8 HIS N 169 PHE N 201 1 33 HELIX 27 AC9 VAL P 34 PHE P 42 1 9 SHEET 1 AA1 2 VAL N 38 ARG N 39 0 SHEET 2 AA1 2 ILE N 88 SER N 89 1 O SER N 89 N VAL N 38 SSBOND 1 CYS D 191 CYS N 40 1555 1555 2.04 CISPEP 1 SER A 56 PRO A 57 0 -8.22 CRYST1 146.010 112.690 90.810 90.00 114.18 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006849 0.000000 0.003075 0.00000 SCALE2 0.000000 0.008874 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012071 0.00000