HEADER LIPID BINDING PROTEIN 06-SEP-16 5LTD TITLE PHOSPHATE-BOUND PICHIA ANGUSTA ATG18 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOPHAGY-RELATED PROTEIN 18; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: TWO PHOSPHATE IONS BOUND AS LIGANDS TO THE PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PICHIA ANGUSTA; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 870730; SOURCE 5 GENE: ATG18; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE BOUND PROTEIN, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SCACIOC,K.KUHNEL REVDAT 2 17-JAN-24 5LTD 1 REMARK REVDAT 1 20-SEP-17 5LTD 0 JRNL AUTH A.SCACIOC,K.KUHNEL JRNL TITL PHOPSHATE-BOUND PICHIA ANGUSTA ATG18 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 27376 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LTD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001289. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27376 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.64500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LTG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % (W/V) PEG 8000, 0.2 M NACL, 0.1 M REMARK 280 SODIUM PHOSPHATE DIBASIC-CITRIC ACID PH 4.2, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 PRO A 4 REMARK 465 ASN A 5 REMARK 465 PRO A 6 REMARK 465 LEU A 7 REMARK 465 ALA A 8 REMARK 465 PHE A 9 REMARK 465 GLU A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 THR A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 HIS A 16 REMARK 465 GLU A 17 REMARK 465 VAL A 18 REMARK 465 ALA A 19 REMARK 465 ALA A 20 REMARK 465 SER A 21 REMARK 465 TYR A 22 REMARK 465 VAL A 23 REMARK 465 THR A 24 REMARK 465 GLU A 25 REMARK 465 HIS A 26 REMARK 465 LYS A 27 REMARK 465 PRO A 28 REMARK 465 ARG A 29 REMARK 465 LYS A 30 REMARK 465 ASN A 31 REMARK 465 ASP A 32 REMARK 465 GLN A 180 REMARK 465 LYS A 181 REMARK 465 LEU A 182 REMARK 465 ALA A 183 REMARK 465 PRO A 184 REMARK 465 ASN A 185 REMARK 465 PRO A 186 REMARK 465 GLN A 187 REMARK 465 THR A 188 REMARK 465 GLU A 189 REMARK 465 VAL A 190 REMARK 465 THR A 191 REMARK 465 LEU A 192 REMARK 465 HIS A 193 REMARK 465 SER A 194 REMARK 465 ASN A 195 REMARK 465 PRO A 196 REMARK 465 GLN A 197 REMARK 465 THR A 198 REMARK 465 VAL A 199 REMARK 465 ARG A 200 REMARK 465 GLU A 298 REMARK 465 GLU A 299 REMARK 465 GLU A 300 REMARK 465 ALA A 301 REMARK 465 ALA A 302 REMARK 465 ASN A 303 REMARK 465 THR A 304 REMARK 465 ILE A 305 REMARK 465 LYS A 306 REMARK 465 SER A 307 REMARK 465 ALA A 308 REMARK 465 ASN A 309 REMARK 465 LYS A 310 REMARK 465 LYS A 311 REMARK 465 ALA A 312 REMARK 465 ARG A 313 REMARK 465 LEU A 314 REMARK 465 THR A 315 REMARK 465 LYS A 316 REMARK 465 ALA A 317 REMARK 465 GLN A 318 REMARK 465 VAL A 319 REMARK 465 PRO A 320 REMARK 465 ASN A 321 REMARK 465 PRO A 322 REMARK 465 LEU A 323 REMARK 465 GLU A 324 REMARK 465 THR A 325 REMARK 465 SER A 326 REMARK 465 PRO A 327 REMARK 465 ASP A 328 REMARK 465 ILE A 329 REMARK 465 TYR A 330 REMARK 465 PRO A 331 REMARK 465 HIS A 332 REMARK 465 ASN A 333 REMARK 465 GLN A 334 REMARK 465 HIS A 335 REMARK 465 THR A 336 REMARK 465 SER A 337 REMARK 465 SER A 338 REMARK 465 ASP A 339 REMARK 465 GLU A 340 REMARK 465 ASP A 341 REMARK 465 GLU A 342 REMARK 465 GLU A 343 REMARK 465 LEU A 344 REMARK 465 ASN A 345 REMARK 465 GLU A 346 REMARK 465 ASP A 347 REMARK 465 GLU A 348 REMARK 465 GLU A 349 REMARK 465 ASP A 350 REMARK 465 LEU A 351 REMARK 465 ASP A 352 REMARK 465 GLY A 353 REMARK 465 ASP A 354 REMARK 465 GLU A 355 REMARK 465 ASP A 356 REMARK 465 GLU A 357 REMARK 465 ASP A 358 REMARK 465 LEU A 359 REMARK 465 GLU A 360 REMARK 465 ASP A 361 REMARK 465 ASP A 362 REMARK 465 ALA A 363 REMARK 465 HIS A 364 REMARK 465 VAL A 365 REMARK 465 PRO A 366 REMARK 465 VAL A 367 REMARK 465 SER A 368 REMARK 465 LEU A 369 REMARK 465 GLN A 370 REMARK 465 ARG A 371 REMARK 465 GLY A 372 REMARK 465 ARG A 373 REMARK 465 SER A 374 REMARK 465 SER A 375 REMARK 465 SER A 376 REMARK 465 SER A 377 REMARK 465 THR A 378 REMARK 465 GLY A 379 REMARK 465 SER A 380 REMARK 465 PHE A 381 REMARK 465 HIS A 382 REMARK 465 SER A 383 REMARK 465 SER A 384 REMARK 465 GLU A 385 REMARK 465 SER A 386 REMARK 465 MET A 387 REMARK 465 THR A 388 REMARK 465 ASP A 389 REMARK 465 LYS A 390 REMARK 465 LEU A 391 REMARK 465 LYS A 392 REMARK 465 GLU A 393 REMARK 465 PRO A 394 REMARK 465 LEU A 395 REMARK 465 VAL A 396 REMARK 465 ASP A 397 REMARK 465 ASN A 398 REMARK 465 SER A 399 REMARK 465 ARG A 400 REMARK 465 LYS A 401 REMARK 465 SER A 402 REMARK 465 VAL A 403 REMARK 465 ALA A 404 REMARK 465 ARG A 405 REMARK 465 MET A 406 REMARK 465 LEU A 407 REMARK 465 ARG A 408 REMARK 465 ARG A 409 REMARK 465 THR A 410 REMARK 465 SER A 411 REMARK 465 GLN A 412 REMARK 465 SER A 413 REMARK 465 LEU A 414 REMARK 465 GLY A 415 REMARK 465 ARG A 416 REMARK 465 LYS A 417 REMARK 465 ALA A 418 REMARK 465 ALA A 419 REMARK 465 GLU A 420 REMARK 465 LYS A 421 REMARK 465 MET A 422 REMARK 465 GLY A 423 REMARK 465 THR A 424 REMARK 465 TYR A 425 REMARK 465 LEU A 426 REMARK 465 PRO A 427 REMARK 465 PRO A 428 REMARK 465 LYS A 429 REMARK 465 PHE A 430 REMARK 465 SER A 431 REMARK 465 SER A 432 REMARK 465 ILE A 433 REMARK 465 LEU A 434 REMARK 465 GLU A 435 REMARK 465 PRO A 436 REMARK 465 ASN A 437 REMARK 465 SER A 468 REMARK 465 VAL A 469 REMARK 465 TYR A 470 REMARK 465 LEU A 471 REMARK 465 LYS A 472 REMARK 465 ASP A 473 REMARK 465 ASP A 474 REMARK 465 ALA A 475 REMARK 465 ASN A 476 REMARK 465 SER A 477 REMARK 465 ILE A 478 REMARK 465 THR A 479 REMARK 465 GLU A 480 REMARK 465 THR A 481 REMARK 465 SER A 482 REMARK 465 GLU A 483 REMARK 465 GLY A 525 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 PRO B 4 REMARK 465 ASN B 5 REMARK 465 PRO B 6 REMARK 465 LEU B 7 REMARK 465 ALA B 8 REMARK 465 PHE B 9 REMARK 465 GLU B 10 REMARK 465 ALA B 11 REMARK 465 ALA B 12 REMARK 465 THR B 13 REMARK 465 ALA B 14 REMARK 465 ALA B 15 REMARK 465 HIS B 16 REMARK 465 GLU B 17 REMARK 465 VAL B 18 REMARK 465 ALA B 19 REMARK 465 ALA B 20 REMARK 465 SER B 21 REMARK 465 TYR B 22 REMARK 465 VAL B 23 REMARK 465 THR B 24 REMARK 465 GLU B 25 REMARK 465 HIS B 26 REMARK 465 LYS B 27 REMARK 465 PRO B 28 REMARK 465 ARG B 29 REMARK 465 LYS B 30 REMARK 465 ASN B 31 REMARK 465 ASP B 32 REMARK 465 GLN B 180 REMARK 465 LYS B 181 REMARK 465 LEU B 182 REMARK 465 ALA B 183 REMARK 465 PRO B 184 REMARK 465 ASN B 185 REMARK 465 PRO B 186 REMARK 465 GLN B 187 REMARK 465 THR B 188 REMARK 465 GLU B 189 REMARK 465 VAL B 190 REMARK 465 THR B 191 REMARK 465 LEU B 192 REMARK 465 HIS B 193 REMARK 465 SER B 194 REMARK 465 ASN B 195 REMARK 465 PRO B 196 REMARK 465 GLN B 197 REMARK 465 THR B 198 REMARK 465 VAL B 199 REMARK 465 ARG B 200 REMARK 465 GLU B 298 REMARK 465 GLU B 299 REMARK 465 GLU B 300 REMARK 465 ALA B 301 REMARK 465 ALA B 302 REMARK 465 ASN B 303 REMARK 465 THR B 304 REMARK 465 ILE B 305 REMARK 465 LYS B 306 REMARK 465 SER B 307 REMARK 465 ALA B 308 REMARK 465 ASN B 309 REMARK 465 LYS B 310 REMARK 465 LYS B 311 REMARK 465 ALA B 312 REMARK 465 ARG B 313 REMARK 465 LEU B 314 REMARK 465 THR B 315 REMARK 465 LYS B 316 REMARK 465 ALA B 317 REMARK 465 GLN B 318 REMARK 465 VAL B 319 REMARK 465 PRO B 320 REMARK 465 ASN B 321 REMARK 465 PRO B 322 REMARK 465 LEU B 323 REMARK 465 GLU B 324 REMARK 465 THR B 325 REMARK 465 SER B 326 REMARK 465 PRO B 327 REMARK 465 ASP B 328 REMARK 465 ILE B 329 REMARK 465 TYR B 330 REMARK 465 PRO B 331 REMARK 465 HIS B 332 REMARK 465 ASN B 333 REMARK 465 GLN B 334 REMARK 465 HIS B 335 REMARK 465 THR B 336 REMARK 465 SER B 337 REMARK 465 SER B 338 REMARK 465 ASP B 339 REMARK 465 GLU B 340 REMARK 465 ASP B 341 REMARK 465 GLU B 342 REMARK 465 GLU B 343 REMARK 465 LEU B 344 REMARK 465 ASN B 345 REMARK 465 GLU B 346 REMARK 465 ASP B 347 REMARK 465 GLU B 348 REMARK 465 GLU B 349 REMARK 465 ASP B 350 REMARK 465 LEU B 351 REMARK 465 ASP B 352 REMARK 465 GLY B 353 REMARK 465 ASP B 354 REMARK 465 GLU B 355 REMARK 465 ASP B 356 REMARK 465 GLU B 357 REMARK 465 ASP B 358 REMARK 465 LEU B 359 REMARK 465 GLU B 360 REMARK 465 ASP B 361 REMARK 465 ASP B 362 REMARK 465 ALA B 363 REMARK 465 HIS B 364 REMARK 465 VAL B 365 REMARK 465 PRO B 366 REMARK 465 VAL B 367 REMARK 465 SER B 368 REMARK 465 LEU B 369 REMARK 465 GLN B 370 REMARK 465 ARG B 371 REMARK 465 GLY B 372 REMARK 465 ARG B 373 REMARK 465 SER B 374 REMARK 465 SER B 375 REMARK 465 SER B 376 REMARK 465 SER B 377 REMARK 465 THR B 378 REMARK 465 GLY B 379 REMARK 465 SER B 380 REMARK 465 PHE B 381 REMARK 465 HIS B 382 REMARK 465 SER B 383 REMARK 465 SER B 384 REMARK 465 GLU B 385 REMARK 465 SER B 386 REMARK 465 MET B 387 REMARK 465 THR B 388 REMARK 465 ASP B 389 REMARK 465 LYS B 390 REMARK 465 LEU B 391 REMARK 465 LYS B 392 REMARK 465 GLU B 393 REMARK 465 PRO B 394 REMARK 465 LEU B 395 REMARK 465 VAL B 396 REMARK 465 ASP B 397 REMARK 465 ASN B 398 REMARK 465 SER B 399 REMARK 465 ARG B 400 REMARK 465 LYS B 401 REMARK 465 SER B 402 REMARK 465 VAL B 403 REMARK 465 ALA B 404 REMARK 465 ARG B 405 REMARK 465 MET B 406 REMARK 465 LEU B 407 REMARK 465 ARG B 408 REMARK 465 ARG B 409 REMARK 465 THR B 410 REMARK 465 SER B 411 REMARK 465 GLN B 412 REMARK 465 SER B 413 REMARK 465 LEU B 414 REMARK 465 GLY B 415 REMARK 465 ARG B 416 REMARK 465 LYS B 417 REMARK 465 ALA B 418 REMARK 465 ALA B 419 REMARK 465 GLU B 420 REMARK 465 LYS B 421 REMARK 465 MET B 422 REMARK 465 GLY B 423 REMARK 465 THR B 424 REMARK 465 TYR B 425 REMARK 465 LEU B 426 REMARK 465 PRO B 427 REMARK 465 PRO B 428 REMARK 465 LYS B 429 REMARK 465 PHE B 430 REMARK 465 SER B 431 REMARK 465 SER B 432 REMARK 465 ILE B 433 REMARK 465 LEU B 434 REMARK 465 GLU B 435 REMARK 465 PRO B 436 REMARK 465 ASN B 437 REMARK 465 SER B 468 REMARK 465 VAL B 469 REMARK 465 TYR B 470 REMARK 465 LEU B 471 REMARK 465 LYS B 472 REMARK 465 ASP B 473 REMARK 465 ASP B 474 REMARK 465 ALA B 475 REMARK 465 ASN B 476 REMARK 465 SER B 477 REMARK 465 ILE B 478 REMARK 465 THR B 479 REMARK 465 GLU B 480 REMARK 465 THR B 481 REMARK 465 SER B 482 REMARK 465 GLU B 483 REMARK 465 ASP B 484 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 33 CG OD1 ND2 REMARK 470 HIS A 94 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 GLN A 109 CG CD OE1 NE2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 GLU A 170 CG CD OE1 OE2 REMARK 470 SER A 178 OG REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 232 CG CD CE NZ REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 TYR A 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 ARG A 295 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 438 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 444 CG CD CE NZ REMARK 470 ASP A 484 CG OD1 OD2 REMARK 470 GLU A 510 CG CD OE1 OE2 REMARK 470 ARG A 511 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 524 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN B 33 CG OD1 ND2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 LYS B 102 CG CD CE NZ REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 ARG B 108 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 109 CG CD OE1 NE2 REMARK 470 GLU B 170 CG CD OE1 OE2 REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 ARG B 222 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 243 CG CD CE NZ REMARK 470 TYR B 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 295 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 438 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 510 CG CD OE1 OE2 REMARK 470 ARG B 511 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 524 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 70 -169.67 -170.41 REMARK 500 PHE A 80 -122.61 55.64 REMARK 500 GLU A 129 -33.49 -132.95 REMARK 500 GLN A 260 110.00 -160.23 REMARK 500 HIS A 439 20.09 -145.71 REMARK 500 LEU A 523 -79.12 -112.95 REMARK 500 ASP B 70 -166.63 -167.87 REMARK 500 PHE B 80 -118.81 59.54 REMARK 500 ASN B 158 73.42 -119.66 REMARK 500 ASN B 171 67.62 -112.44 REMARK 500 THR B 215 -67.52 -99.48 REMARK 500 HIS B 439 -0.94 -150.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 603 DBREF 5LTD A 1 525 UNP Q5QA94 ATG18_PICAN 1 525 DBREF 5LTD B 1 525 UNP Q5QA94 ATG18_PICAN 1 525 SEQRES 1 A 525 MET ALA SER PRO ASN PRO LEU ALA PHE GLU ALA ALA THR SEQRES 2 A 525 ALA ALA HIS GLU VAL ALA ALA SER TYR VAL THR GLU HIS SEQRES 3 A 525 LYS PRO ARG LYS ASN ASP ASN ILE ASN PHE ALA ASN PHE SEQRES 4 A 525 ASN GLN ASP PHE SER CYS VAL SER VAL GLY TYR SER ASN SEQRES 5 A 525 GLY TYR LYS ILE TYR ASN CYS GLU PRO PHE GLY GLN CYS SEQRES 6 A 525 TYR SER LYS SER ASP GLY SER ILE GLY ILE VAL GLU MET SEQRES 7 A 525 LEU PHE SER SER SER LEU LEU ALA ILE VAL GLY MET GLY SEQRES 8 A 525 GLU GLN HIS SER LEU SER PRO ARG ARG LEU LYS ILE ILE SEQRES 9 A 525 ASN THR LYS ARG GLN THR THR ILE CYS GLU LEU THR PHE SEQRES 10 A 525 PRO GLY ALA ILE LEU ALA VAL LYS LEU ASN ARG GLU ARG SEQRES 11 A 525 LEU VAL VAL LEU LEU GLU GLU THR ILE TYR ILE TYR ASP SEQRES 12 A 525 ILE ASN ASN MET ARG LEU LEU HIS THR ILE GLU THR PRO SEQRES 13 A 525 SER ASN PRO ASN GLY LEU ILE ALA LEU SER PRO SER SER SEQRES 14 A 525 GLU ASN ASN TYR LEU ALA TYR PRO SER PRO GLN LYS LEU SEQRES 15 A 525 ALA PRO ASN PRO GLN THR GLU VAL THR LEU HIS SER ASN SEQRES 16 A 525 PRO GLN THR VAL ARG ASN GLY ASP VAL ILE ILE PHE ASP SEQRES 17 A 525 ALA LYS THR LEU GLN PRO THR SER VAL ILE GLU ALA HIS SEQRES 18 A 525 ARG THR SER LEU ALA ALA ILE ALA LEU SER LYS ASP GLY SEQRES 19 A 525 LEU LEU LEU ALA THR ALA SER ASP LYS GLY THR ILE ILE SEQRES 20 A 525 ARG VAL PHE SER VAL ALA THR GLY ILE LYS LEU TYR GLN SEQRES 21 A 525 PHE ARG ARG GLY THR TYR PRO THR LYS ILE TYR SER LEU SEQRES 22 A 525 ALA PHE SER PRO ASP ASN ARG PHE VAL ILE ALA SER SER SEQRES 23 A 525 ALA THR GLU THR VAL HIS ILE PHE ARG LEU GLY GLU GLU SEQRES 24 A 525 GLU ALA ALA ASN THR ILE LYS SER ALA ASN LYS LYS ALA SEQRES 25 A 525 ARG LEU THR LYS ALA GLN VAL PRO ASN PRO LEU GLU THR SEQRES 26 A 525 SER PRO ASP ILE TYR PRO HIS ASN GLN HIS THR SER SER SEQRES 27 A 525 ASP GLU ASP GLU GLU LEU ASN GLU ASP GLU GLU ASP LEU SEQRES 28 A 525 ASP GLY ASP GLU ASP GLU ASP LEU GLU ASP ASP ALA HIS SEQRES 29 A 525 VAL PRO VAL SER LEU GLN ARG GLY ARG SER SER SER SER SEQRES 30 A 525 THR GLY SER PHE HIS SER SER GLU SER MET THR ASP LYS SEQRES 31 A 525 LEU LYS GLU PRO LEU VAL ASP ASN SER ARG LYS SER VAL SEQRES 32 A 525 ALA ARG MET LEU ARG ARG THR SER GLN SER LEU GLY ARG SEQRES 33 A 525 LYS ALA ALA GLU LYS MET GLY THR TYR LEU PRO PRO LYS SEQRES 34 A 525 PHE SER SER ILE LEU GLU PRO ASN ARG HIS PHE ALA SER SEQRES 35 A 525 LEU LYS VAL PRO ALA SER LYS GLU THR LYS THR VAL VAL SEQRES 36 A 525 GLY VAL GLY SER LYS ILE TRP ASP ASP LEU ILE PRO SER SEQRES 37 A 525 VAL TYR LEU LYS ASP ASP ALA ASN SER ILE THR GLU THR SEQRES 38 A 525 SER GLU ASP LEU VAL ASN LYS LYS LEU VAL HIS ILE MET SEQRES 39 A 525 VAL ILE THR SER GLU GLY PHE PHE TYR LYS PHE GLY LEU SEQRES 40 A 525 ASP PRO GLU ARG GLY GLY ASP CYS VAL LEU LEU HIS GLN SEQRES 41 A 525 GLN SER LEU PHE GLY SEQRES 1 B 525 MET ALA SER PRO ASN PRO LEU ALA PHE GLU ALA ALA THR SEQRES 2 B 525 ALA ALA HIS GLU VAL ALA ALA SER TYR VAL THR GLU HIS SEQRES 3 B 525 LYS PRO ARG LYS ASN ASP ASN ILE ASN PHE ALA ASN PHE SEQRES 4 B 525 ASN GLN ASP PHE SER CYS VAL SER VAL GLY TYR SER ASN SEQRES 5 B 525 GLY TYR LYS ILE TYR ASN CYS GLU PRO PHE GLY GLN CYS SEQRES 6 B 525 TYR SER LYS SER ASP GLY SER ILE GLY ILE VAL GLU MET SEQRES 7 B 525 LEU PHE SER SER SER LEU LEU ALA ILE VAL GLY MET GLY SEQRES 8 B 525 GLU GLN HIS SER LEU SER PRO ARG ARG LEU LYS ILE ILE SEQRES 9 B 525 ASN THR LYS ARG GLN THR THR ILE CYS GLU LEU THR PHE SEQRES 10 B 525 PRO GLY ALA ILE LEU ALA VAL LYS LEU ASN ARG GLU ARG SEQRES 11 B 525 LEU VAL VAL LEU LEU GLU GLU THR ILE TYR ILE TYR ASP SEQRES 12 B 525 ILE ASN ASN MET ARG LEU LEU HIS THR ILE GLU THR PRO SEQRES 13 B 525 SER ASN PRO ASN GLY LEU ILE ALA LEU SER PRO SER SER SEQRES 14 B 525 GLU ASN ASN TYR LEU ALA TYR PRO SER PRO GLN LYS LEU SEQRES 15 B 525 ALA PRO ASN PRO GLN THR GLU VAL THR LEU HIS SER ASN SEQRES 16 B 525 PRO GLN THR VAL ARG ASN GLY ASP VAL ILE ILE PHE ASP SEQRES 17 B 525 ALA LYS THR LEU GLN PRO THR SER VAL ILE GLU ALA HIS SEQRES 18 B 525 ARG THR SER LEU ALA ALA ILE ALA LEU SER LYS ASP GLY SEQRES 19 B 525 LEU LEU LEU ALA THR ALA SER ASP LYS GLY THR ILE ILE SEQRES 20 B 525 ARG VAL PHE SER VAL ALA THR GLY ILE LYS LEU TYR GLN SEQRES 21 B 525 PHE ARG ARG GLY THR TYR PRO THR LYS ILE TYR SER LEU SEQRES 22 B 525 ALA PHE SER PRO ASP ASN ARG PHE VAL ILE ALA SER SER SEQRES 23 B 525 ALA THR GLU THR VAL HIS ILE PHE ARG LEU GLY GLU GLU SEQRES 24 B 525 GLU ALA ALA ASN THR ILE LYS SER ALA ASN LYS LYS ALA SEQRES 25 B 525 ARG LEU THR LYS ALA GLN VAL PRO ASN PRO LEU GLU THR SEQRES 26 B 525 SER PRO ASP ILE TYR PRO HIS ASN GLN HIS THR SER SER SEQRES 27 B 525 ASP GLU ASP GLU GLU LEU ASN GLU ASP GLU GLU ASP LEU SEQRES 28 B 525 ASP GLY ASP GLU ASP GLU ASP LEU GLU ASP ASP ALA HIS SEQRES 29 B 525 VAL PRO VAL SER LEU GLN ARG GLY ARG SER SER SER SER SEQRES 30 B 525 THR GLY SER PHE HIS SER SER GLU SER MET THR ASP LYS SEQRES 31 B 525 LEU LYS GLU PRO LEU VAL ASP ASN SER ARG LYS SER VAL SEQRES 32 B 525 ALA ARG MET LEU ARG ARG THR SER GLN SER LEU GLY ARG SEQRES 33 B 525 LYS ALA ALA GLU LYS MET GLY THR TYR LEU PRO PRO LYS SEQRES 34 B 525 PHE SER SER ILE LEU GLU PRO ASN ARG HIS PHE ALA SER SEQRES 35 B 525 LEU LYS VAL PRO ALA SER LYS GLU THR LYS THR VAL VAL SEQRES 36 B 525 GLY VAL GLY SER LYS ILE TRP ASP ASP LEU ILE PRO SER SEQRES 37 B 525 VAL TYR LEU LYS ASP ASP ALA ASN SER ILE THR GLU THR SEQRES 38 B 525 SER GLU ASP LEU VAL ASN LYS LYS LEU VAL HIS ILE MET SEQRES 39 B 525 VAL ILE THR SER GLU GLY PHE PHE TYR LYS PHE GLY LEU SEQRES 40 B 525 ASP PRO GLU ARG GLY GLY ASP CYS VAL LEU LEU HIS GLN SEQRES 41 B 525 GLN SER LEU PHE GLY HET PO4 A 600 5 HET PO4 A 601 5 HET PO4 B 601 5 HET PO4 B 602 5 HET EDO B 603 4 HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 PO4 4(O4 P 3-) FORMUL 7 EDO C2 H6 O2 FORMUL 8 HOH *119(H2 O) SHEET 1 AA1 4 ILE A 34 PHE A 39 0 SHEET 2 AA1 4 CYS A 45 TYR A 50 -1 O GLY A 49 N PHE A 36 SHEET 3 AA1 4 GLY A 53 ASN A 58 -1 O GLY A 53 N TYR A 50 SHEET 4 AA1 4 GLY A 63 SER A 69 -1 O GLY A 63 N ASN A 58 SHEET 1 AA2 4 ILE A 73 MET A 78 0 SHEET 2 AA2 4 LEU A 84 GLY A 89 -1 O ALA A 86 N GLU A 77 SHEET 3 AA2 4 ARG A 100 ASN A 105 -1 O LYS A 102 N ILE A 87 SHEET 4 AA2 4 THR A 110 THR A 116 -1 O THR A 110 N ASN A 105 SHEET 1 AA3 4 ALA A 123 LEU A 126 0 SHEET 2 AA3 4 ARG A 130 LEU A 135 -1 O LEU A 134 N ALA A 123 SHEET 3 AA3 4 THR A 138 ASP A 143 -1 O THR A 138 N LEU A 135 SHEET 4 AA3 4 ARG A 148 GLU A 154 -1 O LEU A 150 N ILE A 141 SHEET 1 AA4 4 ALA A 164 LEU A 165 0 SHEET 2 AA4 4 TYR A 173 PRO A 177 -1 O ALA A 175 N ALA A 164 SHEET 3 AA4 4 GLY A 202 ASP A 208 -1 O PHE A 207 N LEU A 174 SHEET 4 AA4 4 GLN A 213 HIS A 221 -1 O GLN A 213 N ASP A 208 SHEET 1 AA5 4 LEU A 225 LEU A 230 0 SHEET 2 AA5 4 LEU A 236 SER A 241 -1 O ALA A 240 N ALA A 226 SHEET 3 AA5 4 ILE A 246 SER A 251 -1 O PHE A 250 N LEU A 237 SHEET 4 AA5 4 LYS A 257 ARG A 262 -1 O PHE A 261 N ILE A 247 SHEET 1 AA6 5 ILE A 270 PHE A 275 0 SHEET 2 AA6 5 PHE A 281 SER A 286 -1 O SER A 285 N TYR A 271 SHEET 3 AA6 5 THR A 290 ARG A 295 -1 O PHE A 294 N VAL A 282 SHEET 4 AA6 5 ALA A 441 LYS A 444 -1 O LEU A 443 N VAL A 291 SHEET 5 AA6 5 GLY A 513 ASP A 514 1 O GLY A 513 N SER A 442 SHEET 1 AA7 4 THR A 453 ILE A 466 0 SHEET 2 AA7 4 VAL A 486 THR A 497 -1 O LEU A 490 N TRP A 462 SHEET 3 AA7 4 PHE A 501 LEU A 507 -1 O PHE A 505 N ILE A 493 SHEET 4 AA7 4 VAL A 516 SER A 522 -1 O GLN A 521 N PHE A 502 SHEET 1 AA8 4 ILE B 34 PHE B 39 0 SHEET 2 AA8 4 CYS B 45 TYR B 50 -1 O GLY B 49 N ASN B 35 SHEET 3 AA8 4 GLY B 53 ASN B 58 -1 O GLY B 53 N TYR B 50 SHEET 4 AA8 4 GLY B 63 SER B 69 -1 O TYR B 66 N ILE B 56 SHEET 1 AA9 4 ILE B 73 MET B 78 0 SHEET 2 AA9 4 LEU B 84 GLY B 89 -1 O VAL B 88 N ILE B 75 SHEET 3 AA9 4 ARG B 100 ASN B 105 -1 O LYS B 102 N ILE B 87 SHEET 4 AA9 4 THR B 110 THR B 116 -1 O LEU B 115 N LEU B 101 SHEET 1 AB1 4 ALA B 123 LEU B 126 0 SHEET 2 AB1 4 ARG B 130 LEU B 135 -1 O LEU B 134 N ALA B 123 SHEET 3 AB1 4 THR B 138 ASP B 143 -1 O TYR B 142 N LEU B 131 SHEET 4 AB1 4 ARG B 148 GLU B 154 -1 O LEU B 150 N ILE B 141 SHEET 1 AB2 4 ALA B 164 LEU B 165 0 SHEET 2 AB2 4 TYR B 173 PRO B 177 -1 O ALA B 175 N ALA B 164 SHEET 3 AB2 4 GLY B 202 ASP B 208 -1 O PHE B 207 N LEU B 174 SHEET 4 AB2 4 GLN B 213 HIS B 221 -1 O THR B 215 N ILE B 206 SHEET 1 AB3 4 LEU B 225 LEU B 230 0 SHEET 2 AB3 4 LEU B 236 SER B 241 -1 O ALA B 240 N ALA B 226 SHEET 3 AB3 4 ILE B 246 SER B 251 -1 O PHE B 250 N LEU B 237 SHEET 4 AB3 4 LYS B 257 ARG B 262 -1 O PHE B 261 N ILE B 247 SHEET 1 AB4 5 ILE B 270 PHE B 275 0 SHEET 2 AB4 5 PHE B 281 SER B 286 -1 O ILE B 283 N ALA B 274 SHEET 3 AB4 5 THR B 290 ARG B 295 -1 O PHE B 294 N VAL B 282 SHEET 4 AB4 5 ALA B 441 LYS B 444 -1 O ALA B 441 N ILE B 293 SHEET 5 AB4 5 GLY B 513 ASP B 514 1 O GLY B 513 N SER B 442 SHEET 1 AB5 4 THR B 453 ILE B 466 0 SHEET 2 AB5 4 VAL B 486 THR B 497 -1 O VAL B 486 N ILE B 466 SHEET 3 AB5 4 PHE B 501 LEU B 507 -1 O PHE B 505 N ILE B 493 SHEET 4 AB5 4 VAL B 516 SER B 522 -1 O GLN B 521 N PHE B 502 CISPEP 1 GLU A 60 PRO A 61 0 -2.61 CISPEP 2 GLU B 60 PRO B 61 0 -3.87 SITE 1 AC1 4 ARG A 263 THR A 288 THR A 290 HIS A 292 SITE 1 AC2 5 HIS A 221 ARG A 222 THR A 223 SER A 241 SITE 2 AC2 5 ARG A 248 SITE 1 AC3 5 HIS B 221 ARG B 222 THR B 223 SER B 241 SITE 2 AC3 5 HOH B 725 SITE 1 AC4 6 ARG B 263 THR B 288 THR B 290 HIS B 292 SITE 2 AC4 6 HOH B 702 HOH B 747 SITE 1 AC5 5 HIS A 519 GLN A 520 THR B 116 PRO B 118 SITE 2 AC5 5 HOH B 716 CRYST1 58.242 58.253 62.250 83.73 80.85 86.77 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017170 -0.000969 -0.002681 0.00000 SCALE2 0.000000 0.017194 -0.001758 0.00000 SCALE3 0.000000 0.000000 0.016356 0.00000