HEADER TRANSFERASE 07-SEP-16 5LTS TITLE CRYSTAL STRUCTURE OF LYMPHOCYTIC CHORIOMENINGITIS MAMMARENAVIRUS TITLE 2 ENDONUCLEASE MUTANT D118A COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE L; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN L; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LYMPHOCYTIC CHORIOMENINGITIS MAMMARENAVIRUS; SOURCE 3 ORGANISM_TAXID: 11623; SOURCE 4 GENE: L, KUE_IGS310002; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENDONUCLEASE, LCMV ARENAVIRUS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SAEZ-AYALA,E.L.YEKWA,B.CANARD,K.ALVAREZ,F.FERRON REVDAT 4 17-JAN-24 5LTS 1 REMARK REVDAT 3 30-MAY-18 5LTS 1 JRNL REVDAT 2 18-APR-18 5LTS 1 JRNL REVDAT 1 13-SEP-17 5LTS 0 JRNL AUTH M.SAEZ-AYALA,E.L.YEKWA,M.CARCELLI,B.CANARD,K.ALVAREZ, JRNL AUTH 2 F.FERRON JRNL TITL CRYSTAL STRUCTURES OFLYMPHOCYTIC CHORIOMENINGITIS JRNL TITL 2 VIRUSENDONUCLEASE DOMAIN COMPLEXED WITH DIKETO-ACID LIGANDS. JRNL REF IUCRJ V. 5 223 2018 JRNL REFN ESSN 2052-2525 JRNL PMID 29765612 JRNL DOI 10.1107/S2052252518001021 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 21098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1004 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.63 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.28 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2773 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2170 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2637 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE : 0.2360 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3063 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.09630 REMARK 3 B22 (A**2) : 1.44030 REMARK 3 B33 (A**2) : -2.53660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.340 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.330 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.213 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.321 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.213 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3120 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4208 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1139 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 93 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 439 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3120 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 406 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3623 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.16 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.20 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.12 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 14.5570 39.8740 2.9283 REMARK 3 T TENSOR REMARK 3 T11: -0.0305 T22: 0.0108 REMARK 3 T33: -0.1617 T12: 0.0311 REMARK 3 T13: -0.0247 T23: -0.0592 REMARK 3 L TENSOR REMARK 3 L11: 4.5472 L22: 1.4232 REMARK 3 L33: 1.1505 L12: 0.7948 REMARK 3 L13: -1.6468 L23: -0.7675 REMARK 3 S TENSOR REMARK 3 S11: -0.0764 S12: 0.7811 S13: -0.2139 REMARK 3 S21: -0.2729 S22: 0.0761 S23: 0.0862 REMARK 3 S31: 0.0128 S32: -0.2059 S33: 0.0003 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 38.7283 16.6306 7.0486 REMARK 3 T TENSOR REMARK 3 T11: -0.0367 T22: -0.0956 REMARK 3 T33: -0.0495 T12: 0.0739 REMARK 3 T13: 0.0363 T23: 0.0790 REMARK 3 L TENSOR REMARK 3 L11: 1.5963 L22: 2.3983 REMARK 3 L33: 0.9005 L12: 0.9735 REMARK 3 L13: 0.2716 L23: 1.1246 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: -0.3418 S13: -0.4298 REMARK 3 S21: 0.4524 S22: 0.0040 S23: -0.0159 REMARK 3 S31: 0.2701 S32: 0.0578 S33: -0.0341 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LTS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001346. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31183 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 53.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06018 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 3JSB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0,1M PH 6, ISOPROPANOL 3,5%, MNCL2 REMARK 280 1MM, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.34300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.34300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 72.41250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.61050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 72.41250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.61050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.34300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 72.41250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.61050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.34300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 72.41250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 79.61050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 LYS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 LEU A 189 REMARK 465 LYS A 190 REMARK 465 THR A 191 REMARK 465 THR A 192 REMARK 465 ILE A 193 REMARK 465 ASP A 194 REMARK 465 LYS A 195 REMARK 465 ARG A 196 REMARK 465 MET B -7 REMARK 465 LYS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 THR B 192 REMARK 465 ILE B 193 REMARK 465 ASP B 194 REMARK 465 LYS B 195 REMARK 465 ARG B 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 185 CG CD1 CD2 REMARK 470 CYS A 186 SG REMARK 470 GLU A 187 CG CD OE1 OE2 REMARK 470 SER A 188 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU B 189 OG1 THR B 191 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 91 112.96 -162.72 REMARK 500 ASP A 94 -116.20 56.46 REMARK 500 PRO B 80 -109.47 -60.89 REMARK 500 LYS B 91 119.68 -162.56 REMARK 500 ASP B 94 -114.00 81.12 REMARK 500 VAL B 131 0.47 -64.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5LTF RELATED DB: PDB REMARK 900 LCMV ENDONUCLEASE DOMAIN COMPLEXED WITH IONS REMARK 900 RELATED ID: 5LTN RELATED DB: PDB REMARK 900 LCMV ENDONUCLEASE DOMAIN COMPLEXED WITH DPBA REMARK 900 RELATED ID: 5T2T RELATED DB: PDB REMARK 900 LCMV ENDONUCLEASE DOMAIN COMPLEXEDWITH L742001 DBREF1 5LTS A 1 196 UNP A0A059U382_9VIRU DBREF2 5LTS A A0A059U382 2 197 DBREF1 5LTS B 1 196 UNP A0A059U382_9VIRU DBREF2 5LTS B A0A059U382 2 197 SEQADV 5LTS MET A -7 UNP A0A059U38 INITIATING METHIONINE SEQADV 5LTS LYS A -6 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS A -5 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS A -4 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS A -3 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS A -2 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS A -1 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS A 0 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS ALA A 118 UNP A0A059U38 ASP 119 ENGINEERED MUTATION SEQADV 5LTS ASP A 173 UNP A0A059U38 ASN 174 CONFLICT SEQADV 5LTS MET B -7 UNP A0A059U38 INITIATING METHIONINE SEQADV 5LTS LYS B -6 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS B -5 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS B -4 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS B -3 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS B -2 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS B -1 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS HIS B 0 UNP A0A059U38 EXPRESSION TAG SEQADV 5LTS ALA B 118 UNP A0A059U38 ASP 119 ENGINEERED MUTATION SEQADV 5LTS ASP B 173 UNP A0A059U38 ASN 174 CONFLICT SEQRES 1 A 204 MET LYS HIS HIS HIS HIS HIS HIS ASP GLU ILE ILE SER SEQRES 2 A 204 GLU LEU ARG GLU LEU CYS LEU ASN TYR ILE GLU GLN ASP SEQRES 3 A 204 GLU ARG LEU SER ARG GLN LYS LEU ASN PHE LEU GLY GLN SEQRES 4 A 204 ARG GLU PRO ARG MET VAL LEU ILE GLU GLY LEU LYS LEU SEQRES 5 A 204 LEU SER ARG CYS ILE GLU ILE ASP SER ALA ASP LYS SER SEQRES 6 A 204 GLY CYS THR HIS ASN HIS ASP ASP LYS SER VAL GLU THR SEQRES 7 A 204 ILE LEU VAL GLU SER GLY ILE VAL CYS PRO GLY LEU PRO SEQRES 8 A 204 LEU ILE ILE PRO ASP GLY TYR LYS LEU ILE ASP ASN SER SEQRES 9 A 204 LEU ILE LEU LEU GLU CYS PHE VAL ARG SER THR PRO ALA SEQRES 10 A 204 SER PHE GLU LYS LYS PHE ILE GLU ALA THR ASN LYS LEU SEQRES 11 A 204 ALA CYS ILE ARG GLU ASP LEU ALA VAL ALA GLY VAL THR SEQRES 12 A 204 LEU VAL PRO ILE VAL ASP GLY ARG CYS ASP TYR ASP ASN SEQRES 13 A 204 SER PHE MET PRO GLU TRP ALA ASN PHE LYS PHE ARG ASP SEQRES 14 A 204 LEU LEU PHE LYS LEU LEU GLU TYR SER ASN GLN ASP GLU SEQRES 15 A 204 LYS VAL PHE GLU GLU SER GLU TYR PHE ARG LEU CYS GLU SEQRES 16 A 204 SER LEU LYS THR THR ILE ASP LYS ARG SEQRES 1 B 204 MET LYS HIS HIS HIS HIS HIS HIS ASP GLU ILE ILE SER SEQRES 2 B 204 GLU LEU ARG GLU LEU CYS LEU ASN TYR ILE GLU GLN ASP SEQRES 3 B 204 GLU ARG LEU SER ARG GLN LYS LEU ASN PHE LEU GLY GLN SEQRES 4 B 204 ARG GLU PRO ARG MET VAL LEU ILE GLU GLY LEU LYS LEU SEQRES 5 B 204 LEU SER ARG CYS ILE GLU ILE ASP SER ALA ASP LYS SER SEQRES 6 B 204 GLY CYS THR HIS ASN HIS ASP ASP LYS SER VAL GLU THR SEQRES 7 B 204 ILE LEU VAL GLU SER GLY ILE VAL CYS PRO GLY LEU PRO SEQRES 8 B 204 LEU ILE ILE PRO ASP GLY TYR LYS LEU ILE ASP ASN SER SEQRES 9 B 204 LEU ILE LEU LEU GLU CYS PHE VAL ARG SER THR PRO ALA SEQRES 10 B 204 SER PHE GLU LYS LYS PHE ILE GLU ALA THR ASN LYS LEU SEQRES 11 B 204 ALA CYS ILE ARG GLU ASP LEU ALA VAL ALA GLY VAL THR SEQRES 12 B 204 LEU VAL PRO ILE VAL ASP GLY ARG CYS ASP TYR ASP ASN SEQRES 13 B 204 SER PHE MET PRO GLU TRP ALA ASN PHE LYS PHE ARG ASP SEQRES 14 B 204 LEU LEU PHE LYS LEU LEU GLU TYR SER ASN GLN ASP GLU SEQRES 15 B 204 LYS VAL PHE GLU GLU SER GLU TYR PHE ARG LEU CYS GLU SEQRES 16 B 204 SER LEU LYS THR THR ILE ASP LYS ARG HET CL B 201 1 HET NA B 202 1 HET GOL B 203 6 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL CL 1- FORMUL 4 NA NA 1+ FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *113(H2 O) HELIX 1 AA1 HIS A 0 ILE A 15 1 16 HELIX 2 AA2 ASP A 18 ARG A 20 5 3 HELIX 3 AA3 LEU A 21 GLY A 30 1 10 HELIX 4 AA4 GLU A 33 SER A 57 1 25 HELIX 5 AA5 SER A 67 SER A 75 1 9 HELIX 6 AA6 THR A 107 CYS A 124 1 18 HELIX 7 AA7 ILE A 125 ALA A 132 1 8 HELIX 8 AA8 PRO A 152 VAL A 176 1 25 HELIX 9 AA9 GLU A 178 CYS A 186 1 9 HELIX 10 AB1 ASP B 1 ILE B 15 1 15 HELIX 11 AB2 ASP B 18 ARG B 20 5 3 HELIX 12 AB3 LEU B 21 GLN B 31 1 11 HELIX 13 AB4 GLU B 33 SER B 57 1 25 HELIX 14 AB5 SER B 67 SER B 75 1 9 HELIX 15 AB6 THR B 107 CYS B 124 1 18 HELIX 16 AB7 ILE B 125 VAL B 131 1 7 HELIX 17 AB8 PRO B 152 GLU B 179 1 28 HELIX 18 AB9 SER B 180 SER B 188 1 9 SHEET 1 AA1 4 THR A 60 HIS A 61 0 SHEET 2 AA1 4 GLY A 89 ILE A 93 -1 O TYR A 90 N THR A 60 SHEET 3 AA1 4 SER A 96 VAL A 104 -1 O ILE A 98 N LYS A 91 SHEET 4 AA1 4 THR A 135 ARG A 143 1 O ILE A 139 N LEU A 99 SHEET 1 AA2 4 THR B 60 HIS B 61 0 SHEET 2 AA2 4 GLY B 89 ILE B 93 -1 O TYR B 90 N THR B 60 SHEET 3 AA2 4 SER B 96 VAL B 104 -1 O ILE B 98 N LYS B 91 SHEET 4 AA2 4 THR B 135 ARG B 143 1 O ILE B 139 N LEU B 99 CISPEP 1 LYS B 190 THR B 191 0 1.80 SITE 1 AC1 4 ARG B 105 LYS B 114 NA B 202 GOL B 203 SITE 1 AC2 2 CYS B 102 CL B 201 SITE 1 AC3 5 PHE B 103 VAL B 104 ARG B 105 TYR B 146 SITE 2 AC3 5 CL B 201 CRYST1 144.825 159.221 52.686 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006905 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018980 0.00000