HEADER TRANSFERASE 07-SEP-16 5LTS
TITLE CRYSTAL STRUCTURE OF LYMPHOCYTIC CHORIOMENINGITIS MAMMARENAVIRUS
TITLE 2 ENDONUCLEASE MUTANT D118A
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE L;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: PROTEIN L;
COMPND 5 EC: 2.7.7.48;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: LYMPHOCYTIC CHORIOMENINGITIS MAMMARENAVIRUS;
SOURCE 3 ORGANISM_TAXID: 11623;
SOURCE 4 GENE: L, KUE_IGS310002;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS ENDONUCLEASE, LCMV ARENAVIRUS, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.SAEZ-AYALA,E.L.YEKWA,B.CANARD,K.ALVAREZ,F.FERRON
REVDAT 4 17-JAN-24 5LTS 1 REMARK
REVDAT 3 30-MAY-18 5LTS 1 JRNL
REVDAT 2 18-APR-18 5LTS 1 JRNL
REVDAT 1 13-SEP-17 5LTS 0
JRNL AUTH M.SAEZ-AYALA,E.L.YEKWA,M.CARCELLI,B.CANARD,K.ALVAREZ,
JRNL AUTH 2 F.FERRON
JRNL TITL CRYSTAL STRUCTURES OFLYMPHOCYTIC CHORIOMENINGITIS
JRNL TITL 2 VIRUSENDONUCLEASE DOMAIN COMPLEXED WITH DIKETO-ACID LIGANDS.
JRNL REF IUCRJ V. 5 223 2018
JRNL REFN ESSN 2052-2525
JRNL PMID 29765612
JRNL DOI 10.1107/S2052252518001021
REMARK 2
REMARK 2 RESOLUTION. 2.51 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.3
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.61
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9
REMARK 3 NUMBER OF REFLECTIONS : 21098
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.208
REMARK 3 R VALUE (WORKING SET) : 0.207
REMARK 3 FREE R VALUE : 0.218
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760
REMARK 3 FREE R VALUE TEST SET COUNT : 1004
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 11
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.63
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.28
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2773
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2170
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2637
REMARK 3 BIN R VALUE (WORKING SET) : 0.2160
REMARK 3 BIN FREE R VALUE : 0.2360
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3063
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 8
REMARK 3 SOLVENT ATOMS : 113
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 73.38
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.33
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 1.09630
REMARK 3 B22 (A**2) : 1.44030
REMARK 3 B33 (A**2) : -2.53660
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.340
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.330
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.213
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.321
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.213
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 3120 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 4208 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1139 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 93 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 439 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 3120 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 406 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 3623 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.009
REMARK 3 BOND ANGLES (DEGREES) : 1.16
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.20
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.12
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 14.5570 39.8740 2.9283
REMARK 3 T TENSOR
REMARK 3 T11: -0.0305 T22: 0.0108
REMARK 3 T33: -0.1617 T12: 0.0311
REMARK 3 T13: -0.0247 T23: -0.0592
REMARK 3 L TENSOR
REMARK 3 L11: 4.5472 L22: 1.4232
REMARK 3 L33: 1.1505 L12: 0.7948
REMARK 3 L13: -1.6468 L23: -0.7675
REMARK 3 S TENSOR
REMARK 3 S11: -0.0764 S12: 0.7811 S13: -0.2139
REMARK 3 S21: -0.2729 S22: 0.0761 S23: 0.0862
REMARK 3 S31: 0.0128 S32: -0.2059 S33: 0.0003
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 38.7283 16.6306 7.0486
REMARK 3 T TENSOR
REMARK 3 T11: -0.0367 T22: -0.0956
REMARK 3 T33: -0.0495 T12: 0.0739
REMARK 3 T13: 0.0363 T23: 0.0790
REMARK 3 L TENSOR
REMARK 3 L11: 1.5963 L22: 2.3983
REMARK 3 L33: 0.9005 L12: 0.9735
REMARK 3 L13: 0.2716 L23: 1.1246
REMARK 3 S TENSOR
REMARK 3 S11: 0.0301 S12: -0.3418 S13: -0.4298
REMARK 3 S21: 0.4524 S22: 0.0040 S23: -0.0159
REMARK 3 S31: 0.2701 S32: 0.0578 S33: -0.0341
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5LTS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-SEP-16.
REMARK 100 THE DEPOSITION ID IS D_1200001346.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 02-JUL-15
REMARK 200 TEMPERATURE (KELVIN) : 93
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SOLEIL
REMARK 200 BEAMLINE : PROXIMA 1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.978
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31183
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510
REMARK 200 RESOLUTION RANGE LOW (A) : 53.570
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0
REMARK 200 DATA REDUNDANCY : 3.500
REMARK 200 R MERGE (I) : 0.06018
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.1700
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 3.40
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.090
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER 2.6.1
REMARK 200 STARTING MODEL: 3JSB
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 61.64
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0,1M PH 6, ISOPROPANOL 3,5%, MNCL2
REMARK 280 1MM, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -X,Y,-Z+1/2
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.34300
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.34300
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 72.41250
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.61050
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 72.41250
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.61050
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.34300
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 72.41250
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.61050
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.34300
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 72.41250
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 79.61050
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 1800 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 21500 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -7
REMARK 465 LYS A -6
REMARK 465 HIS A -5
REMARK 465 HIS A -4
REMARK 465 HIS A -3
REMARK 465 HIS A -2
REMARK 465 HIS A -1
REMARK 465 LEU A 189
REMARK 465 LYS A 190
REMARK 465 THR A 191
REMARK 465 THR A 192
REMARK 465 ILE A 193
REMARK 465 ASP A 194
REMARK 465 LYS A 195
REMARK 465 ARG A 196
REMARK 465 MET B -7
REMARK 465 LYS B -6
REMARK 465 HIS B -5
REMARK 465 HIS B -4
REMARK 465 HIS B -3
REMARK 465 HIS B -2
REMARK 465 HIS B -1
REMARK 465 THR B 192
REMARK 465 ILE B 193
REMARK 465 ASP B 194
REMARK 465 LYS B 195
REMARK 465 ARG B 196
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LEU A 185 CG CD1 CD2
REMARK 470 CYS A 186 SG
REMARK 470 GLU A 187 CG CD OE1 OE2
REMARK 470 SER A 188 OG
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O LEU B 189 OG1 THR B 191 1.89
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LYS A 91 112.96 -162.72
REMARK 500 ASP A 94 -116.20 56.46
REMARK 500 PRO B 80 -109.47 -60.89
REMARK 500 LYS B 91 119.68 -162.56
REMARK 500 ASP B 94 -114.00 81.12
REMARK 500 VAL B 131 0.47 -64.22
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 203
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5LTF RELATED DB: PDB
REMARK 900 LCMV ENDONUCLEASE DOMAIN COMPLEXED WITH IONS
REMARK 900 RELATED ID: 5LTN RELATED DB: PDB
REMARK 900 LCMV ENDONUCLEASE DOMAIN COMPLEXED WITH DPBA
REMARK 900 RELATED ID: 5T2T RELATED DB: PDB
REMARK 900 LCMV ENDONUCLEASE DOMAIN COMPLEXEDWITH L742001
DBREF1 5LTS A 1 196 UNP A0A059U382_9VIRU
DBREF2 5LTS A A0A059U382 2 197
DBREF1 5LTS B 1 196 UNP A0A059U382_9VIRU
DBREF2 5LTS B A0A059U382 2 197
SEQADV 5LTS MET A -7 UNP A0A059U38 INITIATING METHIONINE
SEQADV 5LTS LYS A -6 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS A -5 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS A -4 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS A -3 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS A -2 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS A -1 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS A 0 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS ALA A 118 UNP A0A059U38 ASP 119 ENGINEERED MUTATION
SEQADV 5LTS ASP A 173 UNP A0A059U38 ASN 174 CONFLICT
SEQADV 5LTS MET B -7 UNP A0A059U38 INITIATING METHIONINE
SEQADV 5LTS LYS B -6 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS B -5 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS B -4 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS B -3 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS B -2 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS B -1 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS HIS B 0 UNP A0A059U38 EXPRESSION TAG
SEQADV 5LTS ALA B 118 UNP A0A059U38 ASP 119 ENGINEERED MUTATION
SEQADV 5LTS ASP B 173 UNP A0A059U38 ASN 174 CONFLICT
SEQRES 1 A 204 MET LYS HIS HIS HIS HIS HIS HIS ASP GLU ILE ILE SER
SEQRES 2 A 204 GLU LEU ARG GLU LEU CYS LEU ASN TYR ILE GLU GLN ASP
SEQRES 3 A 204 GLU ARG LEU SER ARG GLN LYS LEU ASN PHE LEU GLY GLN
SEQRES 4 A 204 ARG GLU PRO ARG MET VAL LEU ILE GLU GLY LEU LYS LEU
SEQRES 5 A 204 LEU SER ARG CYS ILE GLU ILE ASP SER ALA ASP LYS SER
SEQRES 6 A 204 GLY CYS THR HIS ASN HIS ASP ASP LYS SER VAL GLU THR
SEQRES 7 A 204 ILE LEU VAL GLU SER GLY ILE VAL CYS PRO GLY LEU PRO
SEQRES 8 A 204 LEU ILE ILE PRO ASP GLY TYR LYS LEU ILE ASP ASN SER
SEQRES 9 A 204 LEU ILE LEU LEU GLU CYS PHE VAL ARG SER THR PRO ALA
SEQRES 10 A 204 SER PHE GLU LYS LYS PHE ILE GLU ALA THR ASN LYS LEU
SEQRES 11 A 204 ALA CYS ILE ARG GLU ASP LEU ALA VAL ALA GLY VAL THR
SEQRES 12 A 204 LEU VAL PRO ILE VAL ASP GLY ARG CYS ASP TYR ASP ASN
SEQRES 13 A 204 SER PHE MET PRO GLU TRP ALA ASN PHE LYS PHE ARG ASP
SEQRES 14 A 204 LEU LEU PHE LYS LEU LEU GLU TYR SER ASN GLN ASP GLU
SEQRES 15 A 204 LYS VAL PHE GLU GLU SER GLU TYR PHE ARG LEU CYS GLU
SEQRES 16 A 204 SER LEU LYS THR THR ILE ASP LYS ARG
SEQRES 1 B 204 MET LYS HIS HIS HIS HIS HIS HIS ASP GLU ILE ILE SER
SEQRES 2 B 204 GLU LEU ARG GLU LEU CYS LEU ASN TYR ILE GLU GLN ASP
SEQRES 3 B 204 GLU ARG LEU SER ARG GLN LYS LEU ASN PHE LEU GLY GLN
SEQRES 4 B 204 ARG GLU PRO ARG MET VAL LEU ILE GLU GLY LEU LYS LEU
SEQRES 5 B 204 LEU SER ARG CYS ILE GLU ILE ASP SER ALA ASP LYS SER
SEQRES 6 B 204 GLY CYS THR HIS ASN HIS ASP ASP LYS SER VAL GLU THR
SEQRES 7 B 204 ILE LEU VAL GLU SER GLY ILE VAL CYS PRO GLY LEU PRO
SEQRES 8 B 204 LEU ILE ILE PRO ASP GLY TYR LYS LEU ILE ASP ASN SER
SEQRES 9 B 204 LEU ILE LEU LEU GLU CYS PHE VAL ARG SER THR PRO ALA
SEQRES 10 B 204 SER PHE GLU LYS LYS PHE ILE GLU ALA THR ASN LYS LEU
SEQRES 11 B 204 ALA CYS ILE ARG GLU ASP LEU ALA VAL ALA GLY VAL THR
SEQRES 12 B 204 LEU VAL PRO ILE VAL ASP GLY ARG CYS ASP TYR ASP ASN
SEQRES 13 B 204 SER PHE MET PRO GLU TRP ALA ASN PHE LYS PHE ARG ASP
SEQRES 14 B 204 LEU LEU PHE LYS LEU LEU GLU TYR SER ASN GLN ASP GLU
SEQRES 15 B 204 LYS VAL PHE GLU GLU SER GLU TYR PHE ARG LEU CYS GLU
SEQRES 16 B 204 SER LEU LYS THR THR ILE ASP LYS ARG
HET CL B 201 1
HET NA B 202 1
HET GOL B 203 6
HETNAM CL CHLORIDE ION
HETNAM NA SODIUM ION
HETNAM GOL GLYCEROL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 3 CL CL 1-
FORMUL 4 NA NA 1+
FORMUL 5 GOL C3 H8 O3
FORMUL 6 HOH *113(H2 O)
HELIX 1 AA1 HIS A 0 ILE A 15 1 16
HELIX 2 AA2 ASP A 18 ARG A 20 5 3
HELIX 3 AA3 LEU A 21 GLY A 30 1 10
HELIX 4 AA4 GLU A 33 SER A 57 1 25
HELIX 5 AA5 SER A 67 SER A 75 1 9
HELIX 6 AA6 THR A 107 CYS A 124 1 18
HELIX 7 AA7 ILE A 125 ALA A 132 1 8
HELIX 8 AA8 PRO A 152 VAL A 176 1 25
HELIX 9 AA9 GLU A 178 CYS A 186 1 9
HELIX 10 AB1 ASP B 1 ILE B 15 1 15
HELIX 11 AB2 ASP B 18 ARG B 20 5 3
HELIX 12 AB3 LEU B 21 GLN B 31 1 11
HELIX 13 AB4 GLU B 33 SER B 57 1 25
HELIX 14 AB5 SER B 67 SER B 75 1 9
HELIX 15 AB6 THR B 107 CYS B 124 1 18
HELIX 16 AB7 ILE B 125 VAL B 131 1 7
HELIX 17 AB8 PRO B 152 GLU B 179 1 28
HELIX 18 AB9 SER B 180 SER B 188 1 9
SHEET 1 AA1 4 THR A 60 HIS A 61 0
SHEET 2 AA1 4 GLY A 89 ILE A 93 -1 O TYR A 90 N THR A 60
SHEET 3 AA1 4 SER A 96 VAL A 104 -1 O ILE A 98 N LYS A 91
SHEET 4 AA1 4 THR A 135 ARG A 143 1 O ILE A 139 N LEU A 99
SHEET 1 AA2 4 THR B 60 HIS B 61 0
SHEET 2 AA2 4 GLY B 89 ILE B 93 -1 O TYR B 90 N THR B 60
SHEET 3 AA2 4 SER B 96 VAL B 104 -1 O ILE B 98 N LYS B 91
SHEET 4 AA2 4 THR B 135 ARG B 143 1 O ILE B 139 N LEU B 99
CISPEP 1 LYS B 190 THR B 191 0 1.80
SITE 1 AC1 4 ARG B 105 LYS B 114 NA B 202 GOL B 203
SITE 1 AC2 2 CYS B 102 CL B 201
SITE 1 AC3 5 PHE B 103 VAL B 104 ARG B 105 TYR B 146
SITE 2 AC3 5 CL B 201
CRYST1 144.825 159.221 52.686 90.00 90.00 90.00 C 2 2 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006905 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006281 0.000000 0.00000
SCALE3 0.000000 0.000000 0.018980 0.00000