data_5LTY # _entry.id 5LTY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5LTY pdb_00005lty 10.2210/pdb5lty/pdb WWPDB D_1200001319 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-31 2 'Structure model' 1 1 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 4 2 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 5 2 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 6 2 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 7 2 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 8 2 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 9 2 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 10 2 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5LTY _pdbx_database_status.recvd_initial_deposition_date 2016-09-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Morgunova, E.' 1 'Popov, A.' 2 'Taipale, J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 356 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Impact of cytosine methylation on DNA binding specificities of human transcription factors.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/science.aaj2239 _citation.pdbx_database_id_PubMed 28473536 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yin, Y.' 1 ? primary 'Morgunova, E.' 2 ? primary 'Jolma, A.' 3 ? primary 'Kaasinen, E.' 4 ? primary 'Sahu, B.' 5 ? primary 'Khund-Sayeed, S.' 6 ? primary 'Das, P.K.' 7 ? primary 'Kivioja, T.' 8 ? primary 'Dave, K.' 9 ? primary 'Zhong, F.' 10 ? primary 'Nitta, K.R.' 11 ? primary 'Taipale, M.' 12 ? primary 'Popov, A.' 13 ? primary 'Ginno, P.A.' 14 ? primary 'Domcke, S.' 15 ? primary 'Yan, J.' 16 ? primary 'Schubeler, D.' 17 ? primary 'Vinson, C.' 18 ? primary 'Taipale, J.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM)P*GP*AP*CP*CP*TP*CP*C)-3') ; 5462.551 2 ? ? ? ? 2 polymer man 'Homeobox protein CDX-2' 8869.227 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*GP*AP*GP*GP*TP*(5CM)P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') ; 5596.684 2 ? ? ? ? 4 water nat water 18.015 34 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'CDX-3,Caudal-type homeobox protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DT)(DT)(DG)(DT)(DG)(DT)(DT)(DT)(DT)(DA)(5CM)(DG)(DA)(DC)(DC)(DT)(DC)(DC)' TTGTGTTTTACGACCTCC A,B ? 2 'polypeptide(L)' no no TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ K,M ? 3 polydeoxyribonucleotide no yes '(DG)(DG)(DA)(DG)(DG)(DT)(5CM)(DG)(DT)(DA)(DA)(DA)(DA)(DC)(DA)(DC)(DA)(DA)' GGAGGTCGTAAAACACAA F,E ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DG n 1 4 DT n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DT n 1 10 DA n 1 11 5CM n 1 12 DG n 1 13 DA n 1 14 DC n 1 15 DC n 1 16 DT n 1 17 DC n 1 18 DC n 2 1 THR n 2 2 LYS n 2 3 ASP n 2 4 LYS n 2 5 TYR n 2 6 ARG n 2 7 VAL n 2 8 VAL n 2 9 TYR n 2 10 THR n 2 11 ASP n 2 12 HIS n 2 13 GLN n 2 14 ARG n 2 15 LEU n 2 16 GLU n 2 17 LEU n 2 18 GLU n 2 19 LYS n 2 20 GLU n 2 21 PHE n 2 22 HIS n 2 23 TYR n 2 24 SER n 2 25 ARG n 2 26 TYR n 2 27 ILE n 2 28 THR n 2 29 ILE n 2 30 ARG n 2 31 ARG n 2 32 LYS n 2 33 ALA n 2 34 GLU n 2 35 LEU n 2 36 ALA n 2 37 ALA n 2 38 THR n 2 39 LEU n 2 40 GLY n 2 41 LEU n 2 42 SER n 2 43 GLU n 2 44 ARG n 2 45 GLN n 2 46 VAL n 2 47 LYS n 2 48 ILE n 2 49 TRP n 2 50 PHE n 2 51 GLN n 2 52 ASN n 2 53 ARG n 2 54 ARG n 2 55 ALA n 2 56 LYS n 2 57 GLU n 2 58 ARG n 2 59 LYS n 2 60 ILE n 2 61 ASN n 2 62 LYS n 2 63 LYS n 2 64 LYS n 2 65 LEU n 2 66 GLN n 2 67 GLN n 2 68 GLN n 2 69 GLN n 2 70 GLN n 2 71 GLN n 3 1 DG n 3 2 DG n 3 3 DA n 3 4 DG n 3 5 DG n 3 6 DT n 3 7 5CM n 3 8 DG n 3 9 DT n 3 10 DA n 3 11 DA n 3 12 DA n 3 13 DA n 3 14 DC n 3 15 DA n 3 16 DC n 3 17 DA n 3 18 DA n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 71 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CDX2, CDX3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant Rosetta _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETG20A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 18 'Homo sapiens' Human 9606 ? 3 1 sample 1 18 'Homo sapiens' Human 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DA 10 10 10 DA DA A . n A 1 11 5CM 11 11 11 5CM 5CM A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DC 14 14 14 DC DC A . n A 1 15 DC 15 15 15 DC DC A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 DC 17 17 17 DC DC A . n A 1 18 DC 18 18 18 DC DC A . n B 1 1 DT 1 1 1 DT DT B . n B 1 2 DT 2 2 2 DT DT B . n B 1 3 DG 3 3 3 DG DG B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DT 6 6 6 DT DT B . n B 1 7 DT 7 7 7 DT DT B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DT 9 9 9 DT DT B . n B 1 10 DA 10 10 10 DA DA B . n B 1 11 5CM 11 11 11 5CM 5CM B . n B 1 12 DG 12 12 12 DG DG B . n B 1 13 DA 13 13 13 DA DA B . n B 1 14 DC 14 14 14 DC DC B . n B 1 15 DC 15 15 15 DC DC B . n B 1 16 DT 16 16 16 DT DT B . n B 1 17 DC 17 17 17 DC DC B . n B 1 18 DC 18 18 18 DC DC B . n C 2 1 THR 1 185 185 THR THR K . n C 2 2 LYS 2 186 186 LYS LYS K . n C 2 3 ASP 3 187 187 ASP ASP K . n C 2 4 LYS 4 188 188 LYS LYS K . n C 2 5 TYR 5 189 189 TYR TYR K . n C 2 6 ARG 6 190 190 ARG ARG K . n C 2 7 VAL 7 191 191 VAL VAL K . n C 2 8 VAL 8 192 192 VAL VAL K . n C 2 9 TYR 9 193 193 TYR TYR K . n C 2 10 THR 10 194 194 THR THR K . n C 2 11 ASP 11 195 195 ASP ASP K . n C 2 12 HIS 12 196 196 HIS HIS K . n C 2 13 GLN 13 197 197 GLN GLN K . n C 2 14 ARG 14 198 198 ARG ARG K . n C 2 15 LEU 15 199 199 LEU LEU K . n C 2 16 GLU 16 200 200 GLU GLU K . n C 2 17 LEU 17 201 201 LEU LEU K . n C 2 18 GLU 18 202 202 GLU GLU K . n C 2 19 LYS 19 203 203 LYS LYS K . n C 2 20 GLU 20 204 204 GLU GLU K . n C 2 21 PHE 21 205 205 PHE PHE K . n C 2 22 HIS 22 206 206 HIS HIS K . n C 2 23 TYR 23 207 207 TYR TYR K . n C 2 24 SER 24 208 208 SER SER K . n C 2 25 ARG 25 209 209 ARG ARG K . n C 2 26 TYR 26 210 210 TYR TYR K . n C 2 27 ILE 27 211 211 ILE ILE K . n C 2 28 THR 28 212 212 THR THR K . n C 2 29 ILE 29 213 213 ILE ILE K . n C 2 30 ARG 30 214 214 ARG ARG K . n C 2 31 ARG 31 215 215 ARG ARG K . n C 2 32 LYS 32 216 216 LYS LYS K . n C 2 33 ALA 33 217 217 ALA ALA K . n C 2 34 GLU 34 218 218 GLU GLU K . n C 2 35 LEU 35 219 219 LEU LEU K . n C 2 36 ALA 36 220 220 ALA ALA K . n C 2 37 ALA 37 221 221 ALA ALA K . n C 2 38 THR 38 222 222 THR THR K . n C 2 39 LEU 39 223 223 LEU LEU K . n C 2 40 GLY 40 224 224 GLY GLY K . n C 2 41 LEU 41 225 225 LEU LEU K . n C 2 42 SER 42 226 226 SER SER K . n C 2 43 GLU 43 227 227 GLU GLU K . n C 2 44 ARG 44 228 228 ARG ARG K . n C 2 45 GLN 45 229 229 GLN GLN K . n C 2 46 VAL 46 230 230 VAL VAL K . n C 2 47 LYS 47 231 231 LYS LYS K . n C 2 48 ILE 48 232 232 ILE ILE K . n C 2 49 TRP 49 233 233 TRP TRP K . n C 2 50 PHE 50 234 234 PHE PHE K . n C 2 51 GLN 51 235 235 GLN GLN K . n C 2 52 ASN 52 236 236 ASN ASN K . n C 2 53 ARG 53 237 237 ARG ARG K . n C 2 54 ARG 54 238 238 ARG ARG K . n C 2 55 ALA 55 239 239 ALA ALA K . n C 2 56 LYS 56 240 240 LYS LYS K . n C 2 57 GLU 57 241 241 GLU GLU K . n C 2 58 ARG 58 242 242 ARG ARG K . n C 2 59 LYS 59 243 243 LYS LYS K . n C 2 60 ILE 60 244 244 ILE ILE K . n C 2 61 ASN 61 245 245 ASN ASN K . n C 2 62 LYS 62 246 246 LYS LYS K . n C 2 63 LYS 63 247 247 LYS LYS K . n C 2 64 LYS 64 248 248 LYS LYS K . n C 2 65 LEU 65 249 249 LEU LEU K . n C 2 66 GLN 66 250 250 GLN GLN K . n C 2 67 GLN 67 251 251 GLN GLN K . n C 2 68 GLN 68 252 252 GLN GLN K . n C 2 69 GLN 69 253 253 GLN GLN K . n C 2 70 GLN 70 254 254 GLN GLN K . n C 2 71 GLN 71 255 255 GLN GLN K . n D 2 1 THR 1 185 ? ? ? M . n D 2 2 LYS 2 186 186 LYS LYS M . n D 2 3 ASP 3 187 187 ASP ASP M . n D 2 4 LYS 4 188 188 LYS LYS M . n D 2 5 TYR 5 189 189 TYR TYR M . n D 2 6 ARG 6 190 190 ARG ARG M . n D 2 7 VAL 7 191 191 VAL VAL M . n D 2 8 VAL 8 192 192 VAL VAL M . n D 2 9 TYR 9 193 193 TYR TYR M . n D 2 10 THR 10 194 194 THR THR M . n D 2 11 ASP 11 195 195 ASP ASP M . n D 2 12 HIS 12 196 196 HIS HIS M . n D 2 13 GLN 13 197 197 GLN GLN M . n D 2 14 ARG 14 198 198 ARG ARG M . n D 2 15 LEU 15 199 199 LEU LEU M . n D 2 16 GLU 16 200 200 GLU GLU M . n D 2 17 LEU 17 201 201 LEU LEU M . n D 2 18 GLU 18 202 202 GLU GLU M . n D 2 19 LYS 19 203 203 LYS LYS M . n D 2 20 GLU 20 204 204 GLU GLU M . n D 2 21 PHE 21 205 205 PHE PHE M . n D 2 22 HIS 22 206 206 HIS HIS M . n D 2 23 TYR 23 207 207 TYR TYR M . n D 2 24 SER 24 208 208 SER SER M . n D 2 25 ARG 25 209 209 ARG ARG M . n D 2 26 TYR 26 210 210 TYR TYR M . n D 2 27 ILE 27 211 211 ILE ILE M . n D 2 28 THR 28 212 212 THR THR M . n D 2 29 ILE 29 213 213 ILE ILE M . n D 2 30 ARG 30 214 214 ARG ARG M . n D 2 31 ARG 31 215 215 ARG ARG M . n D 2 32 LYS 32 216 216 LYS LYS M . n D 2 33 ALA 33 217 217 ALA ALA M . n D 2 34 GLU 34 218 218 GLU GLU M . n D 2 35 LEU 35 219 219 LEU LEU M . n D 2 36 ALA 36 220 220 ALA ALA M . n D 2 37 ALA 37 221 221 ALA ALA M . n D 2 38 THR 38 222 222 THR THR M . n D 2 39 LEU 39 223 223 LEU LEU M . n D 2 40 GLY 40 224 224 GLY GLY M . n D 2 41 LEU 41 225 225 LEU LEU M . n D 2 42 SER 42 226 226 SER SER M . n D 2 43 GLU 43 227 227 GLU GLU M . n D 2 44 ARG 44 228 228 ARG ARG M . n D 2 45 GLN 45 229 229 GLN GLN M . n D 2 46 VAL 46 230 230 VAL VAL M . n D 2 47 LYS 47 231 231 LYS LYS M . n D 2 48 ILE 48 232 232 ILE ILE M . n D 2 49 TRP 49 233 233 TRP TRP M . n D 2 50 PHE 50 234 234 PHE PHE M . n D 2 51 GLN 51 235 235 GLN GLN M . n D 2 52 ASN 52 236 236 ASN ASN M . n D 2 53 ARG 53 237 237 ARG ARG M . n D 2 54 ARG 54 238 238 ARG ARG M . n D 2 55 ALA 55 239 239 ALA ALA M . n D 2 56 LYS 56 240 240 LYS LYS M . n D 2 57 GLU 57 241 241 GLU GLU M . n D 2 58 ARG 58 242 242 ARG ARG M . n D 2 59 LYS 59 243 243 LYS LYS M . n D 2 60 ILE 60 244 244 ILE ILE M . n D 2 61 ASN 61 245 245 ASN ASN M . n D 2 62 LYS 62 246 246 LYS LYS M . n D 2 63 LYS 63 247 247 LYS LYS M . n D 2 64 LYS 64 248 248 LYS LYS M . n D 2 65 LEU 65 249 249 LEU LEU M . n D 2 66 GLN 66 250 250 GLN GLN M . n D 2 67 GLN 67 251 251 GLN GLN M . n D 2 68 GLN 68 252 252 GLN GLN M . n D 2 69 GLN 69 253 253 GLN GLN M . n D 2 70 GLN 70 254 254 GLN GLN M . n D 2 71 GLN 71 255 255 GLN GLN M . n E 3 1 DG 1 19 19 DG DG F . n E 3 2 DG 2 20 20 DG DG F . n E 3 3 DA 3 21 21 DA DA F . n E 3 4 DG 4 22 22 DG DG F . n E 3 5 DG 5 23 23 DG DG F . n E 3 6 DT 6 24 24 DT DT F . n E 3 7 5CM 7 25 25 5CM 5CM F . n E 3 8 DG 8 26 26 DG DG F . n E 3 9 DT 9 27 27 DT DT F . n E 3 10 DA 10 28 28 DA DA F . n E 3 11 DA 11 29 29 DA DA F . n E 3 12 DA 12 30 30 DA DA F . n E 3 13 DA 13 31 31 DA DA F . n E 3 14 DC 14 32 32 DC DC F . n E 3 15 DA 15 33 33 DA DA F . n E 3 16 DC 16 34 34 DC DC F . n E 3 17 DA 17 35 35 DA DA F . n E 3 18 DA 18 36 36 DA DA F . n F 3 1 DG 1 19 19 DG DG E . n F 3 2 DG 2 20 20 DG DG E . n F 3 3 DA 3 21 21 DA DA E . n F 3 4 DG 4 22 22 DG DG E . n F 3 5 DG 5 23 23 DG DG E . n F 3 6 DT 6 24 24 DT DT E . n F 3 7 5CM 7 25 25 5CM 5CM E . n F 3 8 DG 8 26 26 DG DG E . n F 3 9 DT 9 27 27 DT DT E . n F 3 10 DA 10 28 28 DA DA E . n F 3 11 DA 11 29 29 DA DA E . n F 3 12 DA 12 30 30 DA DA E . n F 3 13 DA 13 31 31 DA DA E . n F 3 14 DC 14 32 32 DC DC E . n F 3 15 DA 15 33 33 DA DA E . n F 3 16 DC 16 34 34 DC DC E . n F 3 17 DA 17 35 35 DA DA E . n F 3 18 DA 18 36 36 DA DA E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 HOH 1 101 24 HOH HOH A . G 4 HOH 2 102 30 HOH HOH A . G 4 HOH 3 103 23 HOH HOH A . G 4 HOH 4 104 2 HOH HOH A . G 4 HOH 5 105 8 HOH HOH A . H 4 HOH 1 101 34 HOH HOH B . H 4 HOH 2 102 26 HOH HOH B . I 4 HOH 1 301 27 HOH HOH K . I 4 HOH 2 302 13 HOH HOH K . I 4 HOH 3 303 16 HOH HOH K . I 4 HOH 4 304 1 HOH HOH K . I 4 HOH 5 305 21 HOH HOH K . I 4 HOH 6 306 29 HOH HOH K . I 4 HOH 7 307 22 HOH HOH K . I 4 HOH 8 308 11 HOH HOH K . I 4 HOH 9 309 4 HOH HOH K . J 4 HOH 1 301 19 HOH HOH M . J 4 HOH 2 302 15 HOH HOH M . J 4 HOH 3 303 31 HOH HOH M . J 4 HOH 4 304 5 HOH HOH M . J 4 HOH 5 305 17 HOH HOH M . J 4 HOH 6 306 25 HOH HOH M . J 4 HOH 7 307 7 HOH HOH M . J 4 HOH 8 308 20 HOH HOH M . J 4 HOH 9 309 10 HOH HOH M . J 4 HOH 10 310 28 HOH HOH M . J 4 HOH 11 311 18 HOH HOH M . J 4 HOH 12 312 12 HOH HOH M . K 4 HOH 1 101 3 HOH HOH F . L 4 HOH 1 101 6 HOH HOH E . L 4 HOH 2 102 33 HOH HOH E . L 4 HOH 3 103 9 HOH HOH E . L 4 HOH 4 104 32 HOH HOH E . L 4 HOH 5 105 14 HOH HOH E . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.25 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 98.460 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5LTY _cell.details ? _cell.formula_units_Z ? _cell.length_a 68.882 _cell.length_a_esd ? _cell.length_b 46.613 _cell.length_b_esd ? _cell.length_c 120.428 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LTY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5LTY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 5000, potassium chloride, magnesium chloride, PEG 400,Tris buffer' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-07-02 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9724 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9724 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 73.25 _reflns.entry_id 5LTY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.660 _reflns.d_resolution_low 63.29 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10979 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.500 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.300 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.660 _reflns_shell.d_res_low 2.790 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 96.700 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.637 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.100 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.647 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.7300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.7600 _refine.aniso_B[2][2] -4.6700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 2.6000 _refine.B_iso_max 201.370 _refine.B_iso_mean 77.8430 _refine.B_iso_min 36.770 _refine.correlation_coeff_Fo_to_Fc 0.9610 _refine.correlation_coeff_Fo_to_Fc_free 0.9320 _refine.details 'U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5LTY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6600 _refine.ls_d_res_low 63.2900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10459 _refine.ls_number_reflns_R_free 519 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.4500 _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2039 _refine.ls_R_factor_R_free 0.2422 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2020 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5EEA _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.3370 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 31.1400 _refine.overall_SU_ML 0.2930 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.6600 _refine_hist.d_res_low 63.2900 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 2757 _refine_hist.pdbx_number_residues_total 213 _refine_hist.pdbx_B_iso_mean_solvent 64.44 _refine_hist.pdbx_number_atoms_protein 1243 _refine_hist.pdbx_number_atoms_nucleic_acid 1480 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.017 0.015 2989 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 2104 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.161 1.533 4224 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.690 3.000 4876 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 20.305 9.680 544 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.011 22.714 70 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 21.368 15.000 262 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.037 15.000 17 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.176 0.240 448 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.014 0.020 2247 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 671 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.988 3.005 562 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.980 2.999 561 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.229 4.480 699 ? r_mcangle_it ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'X-RAY DIFFRACTION' 1 1 'interatomic distance' A 5674 0.040 0.050 ? ? ? ? ? ? 2 'X-RAY DIFFRACTION' 1 2 'interatomic distance' B 5674 0.040 0.050 ? ? ? ? ? ? 3 'X-RAY DIFFRACTION' 2 1 'interatomic distance' K 17276 0.080 0.050 ? ? ? ? ? ? 4 'X-RAY DIFFRACTION' 2 2 'interatomic distance' M 17276 0.080 0.050 ? ? ? ? ? ? 5 'X-RAY DIFFRACTION' 3 1 'interatomic distance' F 5716 0.040 0.050 ? ? ? ? ? ? 6 'X-RAY DIFFRACTION' 3 2 'interatomic distance' E 5716 0.040 0.050 ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.6560 _refine_ls_shell.d_res_low 2.7250 _refine_ls_shell.number_reflns_all 765 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_R_work 727 _refine_ls_shell.percent_reflns_obs 94.2100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3370 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.4110 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 K 2 2 M 3 1 F 3 2 E # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A DT 1 . A DC 18 . A DT 1 A DC 18 0 ? 1 2 0 B DT 1 . B DC 18 . B DT 1 B DC 18 0 ? 2 1 0 C LYS 2 . C GLN 70 . K LYS 186 K GLN 254 0 ? 2 2 0 D LYS 2 . D GLN 70 . M LYS 186 M GLN 254 0 ? 3 1 0 E DG 1 . E DA 18 . F DG 19 F DA 36 0 ? 3 2 0 F DG 1 . F DA 18 . E DG 19 E DA 36 0 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? # _struct.entry_id 5LTY _struct.title 'Homeobox transcription factor CDX2 bound to methylated DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5LTY _struct_keywords.text 'transcription, transcription factor, methylated DNA' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5LTY 5LTY ? 1 ? 1 2 UNP CDX2_HUMAN Q99626 ? 2 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ 185 3 PDB 5LTY 5LTY ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5LTY A 1 ? 18 ? 5LTY 1 ? 18 ? 1 18 2 1 5LTY B 1 ? 18 ? 5LTY 1 ? 18 ? 1 18 3 2 5LTY K 1 ? 71 ? Q99626 185 ? 255 ? 185 255 4 2 5LTY M 1 ? 71 ? Q99626 185 ? 255 ? 185 255 5 3 5LTY F 1 ? 18 ? 5LTY 19 ? 36 ? 19 36 6 3 5LTY E 1 ? 18 ? 5LTY 19 ? 36 ? 19 36 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5110 ? 1 MORE -13 ? 1 'SSA (A^2)' 10570 ? 2 'ABSA (A^2)' 5060 ? 2 MORE -11 ? 2 'SSA (A^2)' 10560 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G,I,K 2 1 B,D,F,H,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR C 10 ? SER C 24 ? THR K 194 SER K 208 1 ? 15 HELX_P HELX_P2 AA2 THR C 28 ? GLY C 40 ? THR K 212 GLY K 224 1 ? 13 HELX_P HELX_P3 AA3 SER C 42 ? GLN C 71 ? SER K 226 GLN K 255 1 ? 30 HELX_P HELX_P4 AA4 THR D 10 ? SER D 24 ? THR M 194 SER M 208 1 ? 15 HELX_P HELX_P5 AA5 THR D 28 ? GLY D 40 ? THR M 212 GLY M 224 1 ? 13 HELX_P HELX_P6 AA6 SER D 42 ? GLN D 71 ? SER M 226 GLN M 255 1 ? 30 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 10 "O3'" ? ? ? 1_555 A 5CM 11 P ? ? A DA 10 A 5CM 11 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale both ? A 5CM 11 "O3'" ? ? ? 1_555 A DG 12 P ? ? A 5CM 11 A DG 12 1_555 ? ? ? ? ? ? ? 1.587 ? ? covale3 covale both ? B DA 10 "O3'" ? ? ? 1_555 B 5CM 11 P ? ? B DA 10 B 5CM 11 1_555 ? ? ? ? ? ? ? 1.569 ? ? covale4 covale both ? B 5CM 11 "O3'" ? ? ? 1_555 B DG 12 P ? ? B 5CM 11 B DG 12 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale both ? E DT 6 "O3'" ? ? ? 1_555 E 5CM 7 P ? ? F DT 24 F 5CM 25 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale6 covale both ? E 5CM 7 "O3'" ? ? ? 1_555 E DG 8 P ? ? F 5CM 25 F DG 26 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale7 covale both ? F DT 6 "O3'" ? ? ? 1_555 F 5CM 7 P ? ? E DT 24 E 5CM 25 1_555 ? ? ? ? ? ? ? 1.561 ? ? covale8 covale both ? F 5CM 7 "O3'" ? ? ? 1_555 F DG 8 P ? ? E 5CM 25 E DG 26 1_555 ? ? ? ? ? ? ? 1.611 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 E DA 18 N1 ? ? A DT 1 F DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 E DA 18 N6 ? ? A DT 1 F DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 E DA 17 N1 ? ? A DT 2 F DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 E DA 17 N6 ? ? A DT 2 F DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 E DC 16 N3 ? ? A DG 3 F DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 E DC 16 O2 ? ? A DG 3 F DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 E DC 16 N4 ? ? A DG 3 F DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 E DA 15 N1 ? ? A DT 4 F DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 E DA 15 N6 ? ? A DT 4 F DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 E DC 14 N3 ? ? A DG 5 F DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 E DC 14 O2 ? ? A DG 5 F DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 E DC 14 N4 ? ? A DG 5 F DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 E DA 13 N1 ? ? A DT 6 F DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 E DA 13 N6 ? ? A DT 6 F DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 E DA 12 N1 ? ? A DT 7 F DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 E DA 12 N6 ? ? A DT 7 F DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 N3 ? ? ? 1_555 E DA 11 N1 ? ? A DT 8 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 O4 ? ? ? 1_555 E DA 11 N6 ? ? A DT 8 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 N3 ? ? ? 1_555 E DA 10 N1 ? ? A DT 9 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 9 O4 ? ? ? 1_555 E DA 10 N6 ? ? A DT 9 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 10 N1 ? ? ? 1_555 E DT 9 N3 ? ? A DA 10 F DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 10 N6 ? ? ? 1_555 E DT 9 O4 ? ? A DA 10 F DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A 5CM 11 N3 ? ? ? 1_555 E DG 8 N1 ? ? A 5CM 11 F DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A 5CM 11 N4 ? ? ? 1_555 E DG 8 O6 ? ? A 5CM 11 F DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A 5CM 11 O2 ? ? ? 1_555 E DG 8 N2 ? ? A 5CM 11 F DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 12 N1 ? ? ? 1_555 E 5CM 7 N3 ? ? A DG 12 F 5CM 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 N2 ? ? ? 1_555 E 5CM 7 O2 ? ? A DG 12 F 5CM 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 O6 ? ? ? 1_555 E 5CM 7 N4 ? ? A DG 12 F 5CM 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 13 N1 ? ? ? 1_555 E DT 6 N3 ? ? A DA 13 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 13 N6 ? ? ? 1_555 E DT 6 O4 ? ? A DA 13 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 14 N3 ? ? ? 1_555 E DG 5 N1 ? ? A DC 14 F DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 14 N4 ? ? ? 1_555 E DG 5 O6 ? ? A DC 14 F DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 14 O2 ? ? ? 1_555 E DG 5 N2 ? ? A DC 14 F DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 N3 ? ? ? 1_555 E DG 4 N1 ? ? A DC 15 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 N4 ? ? ? 1_555 E DG 4 O6 ? ? A DC 15 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 15 O2 ? ? ? 1_555 E DG 4 N2 ? ? A DC 15 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 16 N3 ? ? ? 1_555 E DA 3 N1 ? ? A DT 16 F DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 16 O4 ? ? ? 1_555 E DA 3 N6 ? ? A DT 16 F DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 17 N3 ? ? ? 1_555 E DG 2 N1 ? ? A DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 17 N4 ? ? ? 1_555 E DG 2 O6 ? ? A DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 17 O2 ? ? ? 1_555 E DG 2 N2 ? ? A DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 18 N3 ? ? ? 1_555 E DG 1 N1 ? ? A DC 18 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 18 N4 ? ? ? 1_555 E DG 1 O6 ? ? A DC 18 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DC 18 O2 ? ? ? 1_555 E DG 1 N2 ? ? A DC 18 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DG 3 N1 ? ? ? 1_555 F DC 16 N3 ? ? B DG 3 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DG 3 N2 ? ? ? 1_555 F DC 16 O2 ? ? B DG 3 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DG 3 O6 ? ? ? 1_555 F DC 16 N4 ? ? B DG 3 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DT 4 N3 ? ? ? 1_555 F DA 15 N1 ? ? B DT 4 E DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DT 4 O4 ? ? ? 1_555 F DA 15 N6 ? ? B DT 4 E DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DG 5 N1 ? ? ? 1_555 F DC 14 N3 ? ? B DG 5 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DG 5 N2 ? ? ? 1_555 F DC 14 O2 ? ? B DG 5 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DG 5 O6 ? ? ? 1_555 F DC 14 N4 ? ? B DG 5 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DT 6 N3 ? ? ? 1_555 F DA 13 N1 ? ? B DT 6 E DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DT 6 O4 ? ? ? 1_555 F DA 13 N6 ? ? B DT 6 E DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DT 7 N3 ? ? ? 1_555 F DA 12 N1 ? ? B DT 7 E DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DT 7 O4 ? ? ? 1_555 F DA 12 N6 ? ? B DT 7 E DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DT 8 N3 ? ? ? 1_555 F DA 11 N1 ? ? B DT 8 E DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DT 8 O4 ? ? ? 1_555 F DA 11 N6 ? ? B DT 8 E DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DT 9 N3 ? ? ? 1_555 F DA 10 N1 ? ? B DT 9 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DT 9 O4 ? ? ? 1_555 F DA 10 N6 ? ? B DT 9 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DA 10 N1 ? ? ? 1_555 F DT 9 N3 ? ? B DA 10 E DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DA 10 N6 ? ? ? 1_555 F DT 9 O4 ? ? B DA 10 E DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B 5CM 11 N3 ? ? ? 1_555 F DG 8 N1 ? ? B 5CM 11 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B 5CM 11 N4 ? ? ? 1_555 F DG 8 O6 ? ? B 5CM 11 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B 5CM 11 O2 ? ? ? 1_555 F DG 8 N2 ? ? B 5CM 11 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B DG 12 N1 ? ? ? 1_555 F 5CM 7 N3 ? ? B DG 12 E 5CM 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B DG 12 N2 ? ? ? 1_555 F 5CM 7 O2 ? ? B DG 12 E 5CM 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DG 12 O6 ? ? ? 1_555 F 5CM 7 N4 ? ? B DG 12 E 5CM 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DA 13 N1 ? ? ? 1_555 F DT 6 N3 ? ? B DA 13 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B DA 13 N6 ? ? ? 1_555 F DT 6 O4 ? ? B DA 13 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B DC 14 N3 ? ? ? 1_555 F DG 5 N1 ? ? B DC 14 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B DC 14 N4 ? ? ? 1_555 F DG 5 O6 ? ? B DC 14 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B DC 14 O2 ? ? ? 1_555 F DG 5 N2 ? ? B DC 14 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B DC 15 N3 ? ? ? 1_555 F DG 4 N1 ? ? B DC 15 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B DC 15 N4 ? ? ? 1_555 F DG 4 O6 ? ? B DC 15 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B DC 15 O2 ? ? ? 1_555 F DG 4 N2 ? ? B DC 15 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B DT 16 N3 ? ? ? 1_555 F DA 3 N1 ? ? B DT 16 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B DT 16 O4 ? ? ? 1_555 F DA 3 N6 ? ? B DT 16 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B DC 17 N3 ? ? ? 1_555 F DG 2 N1 ? ? B DC 17 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B DC 17 N4 ? ? ? 1_555 F DG 2 O6 ? ? B DC 17 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B DC 17 O2 ? ? ? 1_555 F DG 2 N2 ? ? B DC 17 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B DC 18 N3 ? ? ? 1_555 F DG 1 N1 ? ? B DC 18 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B DC 18 N4 ? ? ? 1_555 F DG 1 O6 ? ? B DC 18 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B DC 18 O2 ? ? ? 1_555 F DG 1 N2 ? ? B DC 18 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 4 C . ? LYS 188 K TYR 5 C ? TYR 189 K 1 -26.92 2 LYS 4 D . ? LYS 188 M TYR 5 D ? TYR 189 M 1 -22.15 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N1 E DA 35 ? ? O E HOH 101 ? ? 1.85 2 1 OP2 B 5CM 11 ? ? NH2 M ARG 228 ? ? 2.00 3 1 N3 B DT 2 ? ? O E HOH 101 ? ? 2.09 4 1 OP2 A 5CM 11 ? ? NH2 K ARG 228 ? ? 2.12 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OP2 A DC 17 ? ? 1_555 P E DG 19 ? ? 2_465 2.05 2 1 OP2 A DC 17 ? ? 1_555 "O5'" E DG 19 ? ? 2_465 2.08 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG M GLU 218 ? ? CD M GLU 218 ? ? 1.632 1.515 0.117 0.015 N 2 1 "O3'" F DG 22 ? ? P F DG 23 ? ? 1.520 1.607 -0.087 0.012 Y 3 1 "O3'" F DG 23 ? ? P F DT 24 ? ? 1.535 1.607 -0.072 0.012 Y 4 1 "O3'" E DG 22 ? ? P E DG 23 ? ? 1.535 1.607 -0.072 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A DG 12 ? ? P A DG 12 ? ? OP2 A DG 12 ? ? 98.70 105.70 -7.00 0.90 N 2 1 CB K ASP 195 ? ? CG K ASP 195 ? ? OD1 K ASP 195 ? ? 123.93 118.30 5.63 0.90 N 3 1 CB K ASP 195 ? ? CG K ASP 195 ? ? OD2 K ASP 195 ? ? 111.14 118.30 -7.16 0.90 N 4 1 NE K ARG 238 ? ? CZ K ARG 238 ? ? NH1 K ARG 238 ? ? 123.52 120.30 3.22 0.50 N 5 1 CB M LYS 188 ? ? CA M LYS 188 ? ? C M LYS 188 ? ? 122.42 110.40 12.02 2.00 N 6 1 OE1 M GLU 218 ? ? CD M GLU 218 ? ? OE2 M GLU 218 ? ? 114.36 123.30 -8.94 1.20 N 7 1 "O4'" F DG 22 ? ? "C1'" F DG 22 ? ? N9 F DG 22 ? ? 110.36 108.30 2.06 0.30 N 8 1 "O5'" E DG 22 ? ? P E DG 22 ? ? OP1 E DG 22 ? ? 98.93 105.70 -6.77 0.90 N 9 1 "O4'" E DG 22 ? ? "C1'" E DG 22 ? ? N9 E DG 22 ? ? 110.27 108.30 1.97 0.30 N 10 1 "O5'" E DA 29 ? ? "C5'" E DA 29 ? ? "C4'" E DA 29 ? ? 104.36 109.40 -5.04 0.80 N 11 1 "O5'" E DA 30 ? ? P E DA 30 ? ? OP1 E DA 30 ? ? 99.22 105.70 -6.48 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS K 188 ? ? 160.59 81.84 2 1 LYS M 188 ? ? 161.35 79.33 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -19.4945 -7.4969 -21.1436 0.5150 0.4157 0.3717 0.0573 0.0645 -0.0336 2.5321 3.4671 1.5043 -1.6011 0.4680 -0.6905 0.2700 -0.2594 -0.0106 0.2889 -0.3026 0.1430 -0.5196 0.1032 0.0939 'X-RAY DIFFRACTION' 2 ? refined -17.2056 -5.0669 20.1021 0.4410 0.4864 0.3341 -0.1521 -0.1168 0.0209 4.5471 4.3190 1.5422 2.3783 -0.9353 0.4145 0.2038 -0.1176 -0.0862 -0.6700 0.4740 0.0966 0.2017 -0.0038 0.4585 'X-RAY DIFFRACTION' 3 ? refined -20.3093 -2.2104 -9.3639 0.3886 0.4920 0.2854 0.0733 0.0072 0.0394 1.9116 3.5473 1.3171 -0.1813 0.2552 -0.2456 0.1706 -0.1600 -0.0105 -0.1459 0.1590 -0.0285 -0.0200 -0.0271 0.0931 'X-RAY DIFFRACTION' 4 ? refined -19.5343 -9.8213 7.9789 0.3379 0.4351 0.2701 -0.0760 -0.0721 0.0846 3.2252 1.7868 1.0287 -0.4367 -0.2668 -0.8755 0.0179 -0.1587 0.1408 -0.0133 -0.1319 -0.0570 0.2361 0.0356 0.1738 'X-RAY DIFFRACTION' 5 ? refined -18.8468 -6.6472 -19.2811 0.5201 0.3918 0.3573 0.0498 0.0794 0.0124 2.4813 3.6577 0.8458 -1.9927 0.0420 0.5897 0.0529 -0.1407 0.0877 0.2147 -0.0789 -0.0049 -0.2131 0.0505 -0.0125 'X-RAY DIFFRACTION' 6 ? refined -16.8206 -5.7746 18.0904 0.3018 0.2428 0.1672 -0.0953 -0.1217 0.0354 1.1909 2.1311 2.0439 0.3419 -0.7109 0.4907 0.0665 -0.1108 0.0444 -0.1849 0.2418 0.1914 0.3026 -0.2586 0.1830 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 18 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 B 18 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 K 185 K 255 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 M 186 M 255 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 F 19 F 36 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 E 19 E 36 ? ? ? ? ? ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id M _pdbx_unobs_or_zero_occ_residues.auth_comp_id THR _pdbx_unobs_or_zero_occ_residues.auth_seq_id 185 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id D _pdbx_unobs_or_zero_occ_residues.label_comp_id THR _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 DA OP3 O N N 111 DA P P N N 112 DA OP1 O N N 113 DA OP2 O N N 114 DA "O5'" O N N 115 DA "C5'" C N N 116 DA "C4'" C N R 117 DA "O4'" O N N 118 DA "C3'" C N S 119 DA "O3'" O N N 120 DA "C2'" C N N 121 DA "C1'" C N R 122 DA N9 N Y N 123 DA C8 C Y N 124 DA N7 N Y N 125 DA C5 C Y N 126 DA C6 C Y N 127 DA N6 N N N 128 DA N1 N Y N 129 DA C2 C Y N 130 DA N3 N Y N 131 DA C4 C Y N 132 DA HOP3 H N N 133 DA HOP2 H N N 134 DA "H5'" H N N 135 DA "H5''" H N N 136 DA "H4'" H N N 137 DA "H3'" H N N 138 DA "HO3'" H N N 139 DA "H2'" H N N 140 DA "H2''" H N N 141 DA "H1'" H N N 142 DA H8 H N N 143 DA H61 H N N 144 DA H62 H N N 145 DA H2 H N N 146 DC OP3 O N N 147 DC P P N N 148 DC OP1 O N N 149 DC OP2 O N N 150 DC "O5'" O N N 151 DC "C5'" C N N 152 DC "C4'" C N R 153 DC "O4'" O N N 154 DC "C3'" C N S 155 DC "O3'" O N N 156 DC "C2'" C N N 157 DC "C1'" C N R 158 DC N1 N N N 159 DC C2 C N N 160 DC O2 O N N 161 DC N3 N N N 162 DC C4 C N N 163 DC N4 N N N 164 DC C5 C N N 165 DC C6 C N N 166 DC HOP3 H N N 167 DC HOP2 H N N 168 DC "H5'" H N N 169 DC "H5''" H N N 170 DC "H4'" H N N 171 DC "H3'" H N N 172 DC "HO3'" H N N 173 DC "H2'" H N N 174 DC "H2''" H N N 175 DC "H1'" H N N 176 DC H41 H N N 177 DC H42 H N N 178 DC H5 H N N 179 DC H6 H N N 180 DG OP3 O N N 181 DG P P N N 182 DG OP1 O N N 183 DG OP2 O N N 184 DG "O5'" O N N 185 DG "C5'" C N N 186 DG "C4'" C N R 187 DG "O4'" O N N 188 DG "C3'" C N S 189 DG "O3'" O N N 190 DG "C2'" C N N 191 DG "C1'" C N R 192 DG N9 N Y N 193 DG C8 C Y N 194 DG N7 N Y N 195 DG C5 C Y N 196 DG C6 C N N 197 DG O6 O N N 198 DG N1 N N N 199 DG C2 C N N 200 DG N2 N N N 201 DG N3 N N N 202 DG C4 C Y N 203 DG HOP3 H N N 204 DG HOP2 H N N 205 DG "H5'" H N N 206 DG "H5''" H N N 207 DG "H4'" H N N 208 DG "H3'" H N N 209 DG "HO3'" H N N 210 DG "H2'" H N N 211 DG "H2''" H N N 212 DG "H1'" H N N 213 DG H8 H N N 214 DG H1 H N N 215 DG H21 H N N 216 DG H22 H N N 217 DT OP3 O N N 218 DT P P N N 219 DT OP1 O N N 220 DT OP2 O N N 221 DT "O5'" O N N 222 DT "C5'" C N N 223 DT "C4'" C N R 224 DT "O4'" O N N 225 DT "C3'" C N S 226 DT "O3'" O N N 227 DT "C2'" C N N 228 DT "C1'" C N R 229 DT N1 N N N 230 DT C2 C N N 231 DT O2 O N N 232 DT N3 N N N 233 DT C4 C N N 234 DT O4 O N N 235 DT C5 C N N 236 DT C7 C N N 237 DT C6 C N N 238 DT HOP3 H N N 239 DT HOP2 H N N 240 DT "H5'" H N N 241 DT "H5''" H N N 242 DT "H4'" H N N 243 DT "H3'" H N N 244 DT "HO3'" H N N 245 DT "H2'" H N N 246 DT "H2''" H N N 247 DT "H1'" H N N 248 DT H3 H N N 249 DT H71 H N N 250 DT H72 H N N 251 DT H73 H N N 252 DT H6 H N N 253 GLN N N N N 254 GLN CA C N S 255 GLN C C N N 256 GLN O O N N 257 GLN CB C N N 258 GLN CG C N N 259 GLN CD C N N 260 GLN OE1 O N N 261 GLN NE2 N N N 262 GLN OXT O N N 263 GLN H H N N 264 GLN H2 H N N 265 GLN HA H N N 266 GLN HB2 H N N 267 GLN HB3 H N N 268 GLN HG2 H N N 269 GLN HG3 H N N 270 GLN HE21 H N N 271 GLN HE22 H N N 272 GLN HXT H N N 273 GLU N N N N 274 GLU CA C N S 275 GLU C C N N 276 GLU O O N N 277 GLU CB C N N 278 GLU CG C N N 279 GLU CD C N N 280 GLU OE1 O N N 281 GLU OE2 O N N 282 GLU OXT O N N 283 GLU H H N N 284 GLU H2 H N N 285 GLU HA H N N 286 GLU HB2 H N N 287 GLU HB3 H N N 288 GLU HG2 H N N 289 GLU HG3 H N N 290 GLU HE2 H N N 291 GLU HXT H N N 292 GLY N N N N 293 GLY CA C N N 294 GLY C C N N 295 GLY O O N N 296 GLY OXT O N N 297 GLY H H N N 298 GLY H2 H N N 299 GLY HA2 H N N 300 GLY HA3 H N N 301 GLY HXT H N N 302 HIS N N N N 303 HIS CA C N S 304 HIS C C N N 305 HIS O O N N 306 HIS CB C N N 307 HIS CG C Y N 308 HIS ND1 N Y N 309 HIS CD2 C Y N 310 HIS CE1 C Y N 311 HIS NE2 N Y N 312 HIS OXT O N N 313 HIS H H N N 314 HIS H2 H N N 315 HIS HA H N N 316 HIS HB2 H N N 317 HIS HB3 H N N 318 HIS HD1 H N N 319 HIS HD2 H N N 320 HIS HE1 H N N 321 HIS HE2 H N N 322 HIS HXT H N N 323 HOH O O N N 324 HOH H1 H N N 325 HOH H2 H N N 326 ILE N N N N 327 ILE CA C N S 328 ILE C C N N 329 ILE O O N N 330 ILE CB C N S 331 ILE CG1 C N N 332 ILE CG2 C N N 333 ILE CD1 C N N 334 ILE OXT O N N 335 ILE H H N N 336 ILE H2 H N N 337 ILE HA H N N 338 ILE HB H N N 339 ILE HG12 H N N 340 ILE HG13 H N N 341 ILE HG21 H N N 342 ILE HG22 H N N 343 ILE HG23 H N N 344 ILE HD11 H N N 345 ILE HD12 H N N 346 ILE HD13 H N N 347 ILE HXT H N N 348 LEU N N N N 349 LEU CA C N S 350 LEU C C N N 351 LEU O O N N 352 LEU CB C N N 353 LEU CG C N N 354 LEU CD1 C N N 355 LEU CD2 C N N 356 LEU OXT O N N 357 LEU H H N N 358 LEU H2 H N N 359 LEU HA H N N 360 LEU HB2 H N N 361 LEU HB3 H N N 362 LEU HG H N N 363 LEU HD11 H N N 364 LEU HD12 H N N 365 LEU HD13 H N N 366 LEU HD21 H N N 367 LEU HD22 H N N 368 LEU HD23 H N N 369 LEU HXT H N N 370 LYS N N N N 371 LYS CA C N S 372 LYS C C N N 373 LYS O O N N 374 LYS CB C N N 375 LYS CG C N N 376 LYS CD C N N 377 LYS CE C N N 378 LYS NZ N N N 379 LYS OXT O N N 380 LYS H H N N 381 LYS H2 H N N 382 LYS HA H N N 383 LYS HB2 H N N 384 LYS HB3 H N N 385 LYS HG2 H N N 386 LYS HG3 H N N 387 LYS HD2 H N N 388 LYS HD3 H N N 389 LYS HE2 H N N 390 LYS HE3 H N N 391 LYS HZ1 H N N 392 LYS HZ2 H N N 393 LYS HZ3 H N N 394 LYS HXT H N N 395 PHE N N N N 396 PHE CA C N S 397 PHE C C N N 398 PHE O O N N 399 PHE CB C N N 400 PHE CG C Y N 401 PHE CD1 C Y N 402 PHE CD2 C Y N 403 PHE CE1 C Y N 404 PHE CE2 C Y N 405 PHE CZ C Y N 406 PHE OXT O N N 407 PHE H H N N 408 PHE H2 H N N 409 PHE HA H N N 410 PHE HB2 H N N 411 PHE HB3 H N N 412 PHE HD1 H N N 413 PHE HD2 H N N 414 PHE HE1 H N N 415 PHE HE2 H N N 416 PHE HZ H N N 417 PHE HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TRP N N N N 450 TRP CA C N S 451 TRP C C N N 452 TRP O O N N 453 TRP CB C N N 454 TRP CG C Y N 455 TRP CD1 C Y N 456 TRP CD2 C Y N 457 TRP NE1 N Y N 458 TRP CE2 C Y N 459 TRP CE3 C Y N 460 TRP CZ2 C Y N 461 TRP CZ3 C Y N 462 TRP CH2 C Y N 463 TRP OXT O N N 464 TRP H H N N 465 TRP H2 H N N 466 TRP HA H N N 467 TRP HB2 H N N 468 TRP HB3 H N N 469 TRP HD1 H N N 470 TRP HE1 H N N 471 TRP HE3 H N N 472 TRP HZ2 H N N 473 TRP HZ3 H N N 474 TRP HH2 H N N 475 TRP HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 DA OP3 P sing N N 108 DA OP3 HOP3 sing N N 109 DA P OP1 doub N N 110 DA P OP2 sing N N 111 DA P "O5'" sing N N 112 DA OP2 HOP2 sing N N 113 DA "O5'" "C5'" sing N N 114 DA "C5'" "C4'" sing N N 115 DA "C5'" "H5'" sing N N 116 DA "C5'" "H5''" sing N N 117 DA "C4'" "O4'" sing N N 118 DA "C4'" "C3'" sing N N 119 DA "C4'" "H4'" sing N N 120 DA "O4'" "C1'" sing N N 121 DA "C3'" "O3'" sing N N 122 DA "C3'" "C2'" sing N N 123 DA "C3'" "H3'" sing N N 124 DA "O3'" "HO3'" sing N N 125 DA "C2'" "C1'" sing N N 126 DA "C2'" "H2'" sing N N 127 DA "C2'" "H2''" sing N N 128 DA "C1'" N9 sing N N 129 DA "C1'" "H1'" sing N N 130 DA N9 C8 sing Y N 131 DA N9 C4 sing Y N 132 DA C8 N7 doub Y N 133 DA C8 H8 sing N N 134 DA N7 C5 sing Y N 135 DA C5 C6 sing Y N 136 DA C5 C4 doub Y N 137 DA C6 N6 sing N N 138 DA C6 N1 doub Y N 139 DA N6 H61 sing N N 140 DA N6 H62 sing N N 141 DA N1 C2 sing Y N 142 DA C2 N3 doub Y N 143 DA C2 H2 sing N N 144 DA N3 C4 sing Y N 145 DC OP3 P sing N N 146 DC OP3 HOP3 sing N N 147 DC P OP1 doub N N 148 DC P OP2 sing N N 149 DC P "O5'" sing N N 150 DC OP2 HOP2 sing N N 151 DC "O5'" "C5'" sing N N 152 DC "C5'" "C4'" sing N N 153 DC "C5'" "H5'" sing N N 154 DC "C5'" "H5''" sing N N 155 DC "C4'" "O4'" sing N N 156 DC "C4'" "C3'" sing N N 157 DC "C4'" "H4'" sing N N 158 DC "O4'" "C1'" sing N N 159 DC "C3'" "O3'" sing N N 160 DC "C3'" "C2'" sing N N 161 DC "C3'" "H3'" sing N N 162 DC "O3'" "HO3'" sing N N 163 DC "C2'" "C1'" sing N N 164 DC "C2'" "H2'" sing N N 165 DC "C2'" "H2''" sing N N 166 DC "C1'" N1 sing N N 167 DC "C1'" "H1'" sing N N 168 DC N1 C2 sing N N 169 DC N1 C6 sing N N 170 DC C2 O2 doub N N 171 DC C2 N3 sing N N 172 DC N3 C4 doub N N 173 DC C4 N4 sing N N 174 DC C4 C5 sing N N 175 DC N4 H41 sing N N 176 DC N4 H42 sing N N 177 DC C5 C6 doub N N 178 DC C5 H5 sing N N 179 DC C6 H6 sing N N 180 DG OP3 P sing N N 181 DG OP3 HOP3 sing N N 182 DG P OP1 doub N N 183 DG P OP2 sing N N 184 DG P "O5'" sing N N 185 DG OP2 HOP2 sing N N 186 DG "O5'" "C5'" sing N N 187 DG "C5'" "C4'" sing N N 188 DG "C5'" "H5'" sing N N 189 DG "C5'" "H5''" sing N N 190 DG "C4'" "O4'" sing N N 191 DG "C4'" "C3'" sing N N 192 DG "C4'" "H4'" sing N N 193 DG "O4'" "C1'" sing N N 194 DG "C3'" "O3'" sing N N 195 DG "C3'" "C2'" sing N N 196 DG "C3'" "H3'" sing N N 197 DG "O3'" "HO3'" sing N N 198 DG "C2'" "C1'" sing N N 199 DG "C2'" "H2'" sing N N 200 DG "C2'" "H2''" sing N N 201 DG "C1'" N9 sing N N 202 DG "C1'" "H1'" sing N N 203 DG N9 C8 sing Y N 204 DG N9 C4 sing Y N 205 DG C8 N7 doub Y N 206 DG C8 H8 sing N N 207 DG N7 C5 sing Y N 208 DG C5 C6 sing N N 209 DG C5 C4 doub Y N 210 DG C6 O6 doub N N 211 DG C6 N1 sing N N 212 DG N1 C2 sing N N 213 DG N1 H1 sing N N 214 DG C2 N2 sing N N 215 DG C2 N3 doub N N 216 DG N2 H21 sing N N 217 DG N2 H22 sing N N 218 DG N3 C4 sing N N 219 DT OP3 P sing N N 220 DT OP3 HOP3 sing N N 221 DT P OP1 doub N N 222 DT P OP2 sing N N 223 DT P "O5'" sing N N 224 DT OP2 HOP2 sing N N 225 DT "O5'" "C5'" sing N N 226 DT "C5'" "C4'" sing N N 227 DT "C5'" "H5'" sing N N 228 DT "C5'" "H5''" sing N N 229 DT "C4'" "O4'" sing N N 230 DT "C4'" "C3'" sing N N 231 DT "C4'" "H4'" sing N N 232 DT "O4'" "C1'" sing N N 233 DT "C3'" "O3'" sing N N 234 DT "C3'" "C2'" sing N N 235 DT "C3'" "H3'" sing N N 236 DT "O3'" "HO3'" sing N N 237 DT "C2'" "C1'" sing N N 238 DT "C2'" "H2'" sing N N 239 DT "C2'" "H2''" sing N N 240 DT "C1'" N1 sing N N 241 DT "C1'" "H1'" sing N N 242 DT N1 C2 sing N N 243 DT N1 C6 sing N N 244 DT C2 O2 doub N N 245 DT C2 N3 sing N N 246 DT N3 C4 sing N N 247 DT N3 H3 sing N N 248 DT C4 O4 doub N N 249 DT C4 C5 sing N N 250 DT C5 C7 sing N N 251 DT C5 C6 doub N N 252 DT C7 H71 sing N N 253 DT C7 H72 sing N N 254 DT C7 H73 sing N N 255 DT C6 H6 sing N N 256 GLN N CA sing N N 257 GLN N H sing N N 258 GLN N H2 sing N N 259 GLN CA C sing N N 260 GLN CA CB sing N N 261 GLN CA HA sing N N 262 GLN C O doub N N 263 GLN C OXT sing N N 264 GLN CB CG sing N N 265 GLN CB HB2 sing N N 266 GLN CB HB3 sing N N 267 GLN CG CD sing N N 268 GLN CG HG2 sing N N 269 GLN CG HG3 sing N N 270 GLN CD OE1 doub N N 271 GLN CD NE2 sing N N 272 GLN NE2 HE21 sing N N 273 GLN NE2 HE22 sing N N 274 GLN OXT HXT sing N N 275 GLU N CA sing N N 276 GLU N H sing N N 277 GLU N H2 sing N N 278 GLU CA C sing N N 279 GLU CA CB sing N N 280 GLU CA HA sing N N 281 GLU C O doub N N 282 GLU C OXT sing N N 283 GLU CB CG sing N N 284 GLU CB HB2 sing N N 285 GLU CB HB3 sing N N 286 GLU CG CD sing N N 287 GLU CG HG2 sing N N 288 GLU CG HG3 sing N N 289 GLU CD OE1 doub N N 290 GLU CD OE2 sing N N 291 GLU OE2 HE2 sing N N 292 GLU OXT HXT sing N N 293 GLY N CA sing N N 294 GLY N H sing N N 295 GLY N H2 sing N N 296 GLY CA C sing N N 297 GLY CA HA2 sing N N 298 GLY CA HA3 sing N N 299 GLY C O doub N N 300 GLY C OXT sing N N 301 GLY OXT HXT sing N N 302 HIS N CA sing N N 303 HIS N H sing N N 304 HIS N H2 sing N N 305 HIS CA C sing N N 306 HIS CA CB sing N N 307 HIS CA HA sing N N 308 HIS C O doub N N 309 HIS C OXT sing N N 310 HIS CB CG sing N N 311 HIS CB HB2 sing N N 312 HIS CB HB3 sing N N 313 HIS CG ND1 sing Y N 314 HIS CG CD2 doub Y N 315 HIS ND1 CE1 doub Y N 316 HIS ND1 HD1 sing N N 317 HIS CD2 NE2 sing Y N 318 HIS CD2 HD2 sing N N 319 HIS CE1 NE2 sing Y N 320 HIS CE1 HE1 sing N N 321 HIS NE2 HE2 sing N N 322 HIS OXT HXT sing N N 323 HOH O H1 sing N N 324 HOH O H2 sing N N 325 ILE N CA sing N N 326 ILE N H sing N N 327 ILE N H2 sing N N 328 ILE CA C sing N N 329 ILE CA CB sing N N 330 ILE CA HA sing N N 331 ILE C O doub N N 332 ILE C OXT sing N N 333 ILE CB CG1 sing N N 334 ILE CB CG2 sing N N 335 ILE CB HB sing N N 336 ILE CG1 CD1 sing N N 337 ILE CG1 HG12 sing N N 338 ILE CG1 HG13 sing N N 339 ILE CG2 HG21 sing N N 340 ILE CG2 HG22 sing N N 341 ILE CG2 HG23 sing N N 342 ILE CD1 HD11 sing N N 343 ILE CD1 HD12 sing N N 344 ILE CD1 HD13 sing N N 345 ILE OXT HXT sing N N 346 LEU N CA sing N N 347 LEU N H sing N N 348 LEU N H2 sing N N 349 LEU CA C sing N N 350 LEU CA CB sing N N 351 LEU CA HA sing N N 352 LEU C O doub N N 353 LEU C OXT sing N N 354 LEU CB CG sing N N 355 LEU CB HB2 sing N N 356 LEU CB HB3 sing N N 357 LEU CG CD1 sing N N 358 LEU CG CD2 sing N N 359 LEU CG HG sing N N 360 LEU CD1 HD11 sing N N 361 LEU CD1 HD12 sing N N 362 LEU CD1 HD13 sing N N 363 LEU CD2 HD21 sing N N 364 LEU CD2 HD22 sing N N 365 LEU CD2 HD23 sing N N 366 LEU OXT HXT sing N N 367 LYS N CA sing N N 368 LYS N H sing N N 369 LYS N H2 sing N N 370 LYS CA C sing N N 371 LYS CA CB sing N N 372 LYS CA HA sing N N 373 LYS C O doub N N 374 LYS C OXT sing N N 375 LYS CB CG sing N N 376 LYS CB HB2 sing N N 377 LYS CB HB3 sing N N 378 LYS CG CD sing N N 379 LYS CG HG2 sing N N 380 LYS CG HG3 sing N N 381 LYS CD CE sing N N 382 LYS CD HD2 sing N N 383 LYS CD HD3 sing N N 384 LYS CE NZ sing N N 385 LYS CE HE2 sing N N 386 LYS CE HE3 sing N N 387 LYS NZ HZ1 sing N N 388 LYS NZ HZ2 sing N N 389 LYS NZ HZ3 sing N N 390 LYS OXT HXT sing N N 391 PHE N CA sing N N 392 PHE N H sing N N 393 PHE N H2 sing N N 394 PHE CA C sing N N 395 PHE CA CB sing N N 396 PHE CA HA sing N N 397 PHE C O doub N N 398 PHE C OXT sing N N 399 PHE CB CG sing N N 400 PHE CB HB2 sing N N 401 PHE CB HB3 sing N N 402 PHE CG CD1 doub Y N 403 PHE CG CD2 sing Y N 404 PHE CD1 CE1 sing Y N 405 PHE CD1 HD1 sing N N 406 PHE CD2 CE2 doub Y N 407 PHE CD2 HD2 sing N N 408 PHE CE1 CZ doub Y N 409 PHE CE1 HE1 sing N N 410 PHE CE2 CZ sing Y N 411 PHE CE2 HE2 sing N N 412 PHE CZ HZ sing N N 413 PHE OXT HXT sing N N 414 SER N CA sing N N 415 SER N H sing N N 416 SER N H2 sing N N 417 SER CA C sing N N 418 SER CA CB sing N N 419 SER CA HA sing N N 420 SER C O doub N N 421 SER C OXT sing N N 422 SER CB OG sing N N 423 SER CB HB2 sing N N 424 SER CB HB3 sing N N 425 SER OG HG sing N N 426 SER OXT HXT sing N N 427 THR N CA sing N N 428 THR N H sing N N 429 THR N H2 sing N N 430 THR CA C sing N N 431 THR CA CB sing N N 432 THR CA HA sing N N 433 THR C O doub N N 434 THR C OXT sing N N 435 THR CB OG1 sing N N 436 THR CB CG2 sing N N 437 THR CB HB sing N N 438 THR OG1 HG1 sing N N 439 THR CG2 HG21 sing N N 440 THR CG2 HG22 sing N N 441 THR CG2 HG23 sing N N 442 THR OXT HXT sing N N 443 TRP N CA sing N N 444 TRP N H sing N N 445 TRP N H2 sing N N 446 TRP CA C sing N N 447 TRP CA CB sing N N 448 TRP CA HA sing N N 449 TRP C O doub N N 450 TRP C OXT sing N N 451 TRP CB CG sing N N 452 TRP CB HB2 sing N N 453 TRP CB HB3 sing N N 454 TRP CG CD1 doub Y N 455 TRP CG CD2 sing Y N 456 TRP CD1 NE1 sing Y N 457 TRP CD1 HD1 sing N N 458 TRP CD2 CE2 doub Y N 459 TRP CD2 CE3 sing Y N 460 TRP NE1 CE2 sing Y N 461 TRP NE1 HE1 sing N N 462 TRP CE2 CZ2 sing Y N 463 TRP CE3 CZ3 doub Y N 464 TRP CE3 HE3 sing N N 465 TRP CZ2 CH2 doub Y N 466 TRP CZ2 HZ2 sing N N 467 TRP CZ3 CH2 sing Y N 468 TRP CZ3 HZ3 sing N N 469 TRP CH2 HH2 sing N N 470 TRP OXT HXT sing N N 471 TYR N CA sing N N 472 TYR N H sing N N 473 TYR N H2 sing N N 474 TYR CA C sing N N 475 TYR CA CB sing N N 476 TYR CA HA sing N N 477 TYR C O doub N N 478 TYR C OXT sing N N 479 TYR CB CG sing N N 480 TYR CB HB2 sing N N 481 TYR CB HB3 sing N N 482 TYR CG CD1 doub Y N 483 TYR CG CD2 sing Y N 484 TYR CD1 CE1 sing Y N 485 TYR CD1 HD1 sing N N 486 TYR CD2 CE2 doub Y N 487 TYR CD2 HD2 sing N N 488 TYR CE1 CZ doub Y N 489 TYR CE1 HE1 sing N N 490 TYR CE2 CZ sing Y N 491 TYR CE2 HE2 sing N N 492 TYR CZ OH sing N N 493 TYR OH HH sing N N 494 TYR OXT HXT sing N N 495 VAL N CA sing N N 496 VAL N H sing N N 497 VAL N H2 sing N N 498 VAL CA C sing N N 499 VAL CA CB sing N N 500 VAL CA HA sing N N 501 VAL C O doub N N 502 VAL C OXT sing N N 503 VAL CB CG1 sing N N 504 VAL CB CG2 sing N N 505 VAL CB HB sing N N 506 VAL CG1 HG11 sing N N 507 VAL CG1 HG12 sing N N 508 VAL CG1 HG13 sing N N 509 VAL CG2 HG21 sing N N 510 VAL CG2 HG22 sing N N 511 VAL CG2 HG23 sing N N 512 VAL OXT HXT sing N N 513 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5LTY 'double helix' 5LTY 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 E DA 18 1_555 -1.328 -0.245 0.225 -4.756 -7.389 -2.235 1 A_DT1:DA36_F A 1 ? F 36 ? 20 1 1 A DT 2 1_555 E DA 17 1_555 -0.444 -0.056 -0.110 -6.372 -4.756 -4.622 2 A_DT2:DA35_F A 2 ? F 35 ? 20 1 1 A DG 3 1_555 E DC 16 1_555 -0.085 -0.087 -0.115 -3.375 4.132 -2.444 3 A_DG3:DC34_F A 3 ? F 34 ? 19 1 1 A DT 4 1_555 E DA 15 1_555 -0.822 -0.112 0.184 6.071 -3.605 -2.162 4 A_DT4:DA33_F A 4 ? F 33 ? 20 1 1 A DG 5 1_555 E DC 14 1_555 -0.074 -0.074 0.109 1.934 -10.940 -0.710 5 A_DG5:DC32_F A 5 ? F 32 ? 19 1 1 A DT 6 1_555 E DA 13 1_555 0.293 -0.167 -0.094 0.531 -12.764 1.285 6 A_DT6:DA31_F A 6 ? F 31 ? 20 1 1 A DT 7 1_555 E DA 12 1_555 0.169 -0.160 0.083 -7.129 -15.799 -0.163 7 A_DT7:DA30_F A 7 ? F 30 ? 20 1 1 A DT 8 1_555 E DA 11 1_555 -0.126 -0.093 0.091 -10.896 -9.862 0.537 8 A_DT8:DA29_F A 8 ? F 29 ? 20 1 1 A DT 9 1_555 E DA 10 1_555 0.041 -0.107 -0.015 -9.548 -5.907 -0.737 9 A_DT9:DA28_F A 9 ? F 28 ? 20 1 1 A DA 10 1_555 E DT 9 1_555 0.209 -0.139 0.243 -6.241 -6.053 0.725 10 A_DA10:DT27_F A 10 ? F 27 ? 20 1 1 A 5CM 11 1_555 E DG 8 1_555 0.305 -0.242 -0.193 -2.166 -14.043 -1.239 11 A_5CM11:DG26_F A 11 ? F 26 ? 19 1 1 A DG 12 1_555 E 5CM 7 1_555 0.003 -0.107 -0.170 2.349 -5.911 -1.432 12 A_DG12:5CM25_F A 12 ? F 25 ? 19 1 1 A DA 13 1_555 E DT 6 1_555 0.065 -0.106 0.249 8.620 -8.326 -3.585 13 A_DA13:DT24_F A 13 ? F 24 ? 20 1 1 A DC 14 1_555 E DG 5 1_555 0.089 -0.067 -0.016 7.197 -12.141 -0.506 14 A_DC14:DG23_F A 14 ? F 23 ? 19 1 1 A DC 15 1_555 E DG 4 1_555 0.011 -0.086 0.451 -4.107 -9.104 -1.750 15 A_DC15:DG22_F A 15 ? F 22 ? 19 1 1 A DT 16 1_555 E DA 3 1_555 -0.068 -0.117 0.132 -1.309 -8.130 -0.930 16 A_DT16:DA21_F A 16 ? F 21 ? 20 1 1 A DC 17 1_555 E DG 2 1_555 0.514 -0.181 0.270 -2.877 -3.325 -0.693 17 A_DC17:DG20_F A 17 ? F 20 ? 19 1 1 A DC 18 1_555 E DG 1 1_555 0.860 -0.298 -0.162 2.839 3.174 -0.831 18 A_DC18:DG19_F A 18 ? F 19 ? 19 1 1 B DG 3 1_555 F DC 16 1_555 0.131 -0.033 0.149 -1.021 0.284 -0.250 19 B_DG3:DC34_E B 3 ? E 34 ? 19 1 1 B DT 4 1_555 F DA 15 1_555 -0.802 -0.195 0.440 6.841 -7.571 -0.262 20 B_DT4:DA33_E B 4 ? E 33 ? 20 1 1 B DG 5 1_555 F DC 14 1_555 -0.276 -0.126 0.268 1.364 -11.664 -1.284 21 B_DG5:DC32_E B 5 ? E 32 ? 19 1 1 B DT 6 1_555 F DA 13 1_555 0.171 -0.137 0.031 0.293 -12.343 0.185 22 B_DT6:DA31_E B 6 ? E 31 ? 20 1 1 B DT 7 1_555 F DA 12 1_555 0.130 -0.141 0.138 -6.431 -15.892 -1.250 23 B_DT7:DA30_E B 7 ? E 30 ? 20 1 1 B DT 8 1_555 F DA 11 1_555 -0.180 -0.108 0.119 -10.416 -10.645 0.330 24 B_DT8:DA29_E B 8 ? E 29 ? 20 1 1 B DT 9 1_555 F DA 10 1_555 -0.042 -0.118 -0.005 -9.338 -6.514 0.283 25 B_DT9:DA28_E B 9 ? E 28 ? 20 1 1 B DA 10 1_555 F DT 9 1_555 0.119 -0.119 0.212 -5.609 -5.781 1.543 26 B_DA10:DT27_E B 10 ? E 27 ? 20 1 1 B 5CM 11 1_555 F DG 8 1_555 0.270 -0.225 -0.231 -1.957 -13.762 -0.775 27 B_5CM11:DG26_E B 11 ? E 26 ? 19 1 1 B DG 12 1_555 F 5CM 7 1_555 0.051 -0.101 -0.198 2.309 -5.711 -0.811 28 B_DG12:5CM25_E B 12 ? E 25 ? 19 1 1 B DA 13 1_555 F DT 6 1_555 0.127 -0.122 0.213 8.668 -8.517 -3.169 29 B_DA13:DT24_E B 13 ? E 24 ? 20 1 1 B DC 14 1_555 F DG 5 1_555 0.117 -0.077 -0.011 7.342 -12.376 -0.342 30 B_DC14:DG23_E B 14 ? E 23 ? 19 1 1 B DC 15 1_555 F DG 4 1_555 0.005 -0.104 0.466 -3.407 -9.591 -1.790 31 B_DC15:DG22_E B 15 ? E 22 ? 19 1 1 B DT 16 1_555 F DA 3 1_555 -0.211 -0.130 0.109 -0.288 -9.097 -0.791 32 B_DT16:DA21_E B 16 ? E 21 ? 20 1 1 B DC 17 1_555 F DG 2 1_555 0.249 -0.123 0.278 -2.922 -4.457 -1.237 33 B_DC17:DG20_E B 17 ? E 20 ? 19 1 1 B DC 18 1_555 F DG 1 1_555 0.831 -0.294 -0.369 0.676 0.359 -0.597 34 B_DC18:DG19_E B 18 ? E 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 E DA 18 1_555 A DT 2 1_555 E DA 17 1_555 -0.441 0.089 3.445 -1.459 0.470 40.167 0.073 0.466 3.459 0.684 2.124 40.195 1 AA_DT1DT2:DA35DA36_FF A 1 ? F 36 ? A 2 ? F 35 ? 1 A DT 2 1_555 E DA 17 1_555 A DG 3 1_555 E DC 16 1_555 0.834 1.339 3.087 -1.601 -0.577 43.389 1.862 -1.273 3.039 -0.781 2.165 43.421 2 AA_DT2DG3:DC34DA35_FF A 2 ? F 35 ? A 3 ? F 34 ? 1 A DG 3 1_555 E DC 16 1_555 A DT 4 1_555 E DA 15 1_555 -0.307 -0.267 3.138 -4.420 4.605 19.756 -2.657 -0.987 2.995 12.991 12.468 20.752 3 AA_DG3DT4:DA33DC34_FF A 3 ? F 34 ? A 4 ? F 33 ? 1 A DT 4 1_555 E DA 15 1_555 A DG 5 1_555 E DC 14 1_555 0.084 -0.057 3.359 -1.454 3.357 43.205 -0.412 -0.259 3.341 4.549 1.970 43.353 4 AA_DT4DG5:DC32DA33_FF A 4 ? F 33 ? A 5 ? F 32 ? 1 A DG 5 1_555 E DC 14 1_555 A DT 6 1_555 E DA 13 1_555 -0.132 -0.815 3.319 0.319 1.149 33.714 -1.592 0.280 3.289 1.981 -0.550 33.734 5 AA_DG5DT6:DA31DC32_FF A 5 ? F 32 ? A 6 ? F 31 ? 1 A DT 6 1_555 E DA 13 1_555 A DT 7 1_555 E DA 12 1_555 -0.454 -0.498 3.392 -0.463 0.024 35.832 -0.813 0.669 3.397 0.039 0.753 35.835 6 AA_DT6DT7:DA30DA31_FF A 6 ? F 31 ? A 7 ? F 30 ? 1 A DT 7 1_555 E DA 12 1_555 A DT 8 1_555 E DA 11 1_555 0.187 -0.071 3.276 -0.057 3.806 39.026 -0.561 -0.285 3.254 5.681 0.085 39.204 7 AA_DT7DT8:DA29DA30_FF A 7 ? F 30 ? A 8 ? F 29 ? 1 A DT 8 1_555 E DA 11 1_555 A DT 9 1_555 E DA 10 1_555 -0.433 0.052 3.316 -0.359 6.074 32.304 -0.966 0.703 3.276 10.797 0.639 32.857 8 AA_DT8DT9:DA28DA29_FF A 8 ? F 29 ? A 9 ? F 28 ? 1 A DT 9 1_555 E DA 10 1_555 A DA 10 1_555 E DT 9 1_555 0.964 -0.266 3.297 1.320 5.449 36.224 -1.175 -1.351 3.256 8.699 -2.107 36.641 9 AA_DT9DA10:DT27DA28_FF A 9 ? F 28 ? A 10 ? F 27 ? 1 A DA 10 1_555 E DT 9 1_555 A 5CM 11 1_555 E DG 8 1_555 -0.418 -0.679 3.238 5.218 -2.412 29.402 -0.822 1.873 3.163 -4.696 -10.159 29.947 10 AA_DA105CM11:DG26DT27_FF A 10 ? F 27 ? A 11 ? F 26 ? 1 A 5CM 11 1_555 E DG 8 1_555 A DG 12 1_555 E 5CM 7 1_555 -0.001 0.520 3.243 0.742 18.163 31.710 -1.792 0.109 3.086 30.327 -1.238 36.434 11 AA_5CM11DG12:5CM25DG26_FF A 11 ? F 26 ? A 12 ? F 25 ? 1 A DG 12 1_555 E 5CM 7 1_555 A DA 13 1_555 E DT 6 1_555 -0.598 -0.341 3.124 -6.432 3.113 33.160 -1.069 0.024 3.138 5.377 11.110 33.900 12 AA_DG12DA13:DT245CM25_FF A 12 ? F 25 ? A 13 ? F 24 ? 1 A DA 13 1_555 E DT 6 1_555 A DC 14 1_555 E DG 5 1_555 0.632 -0.759 3.377 -0.389 4.248 28.610 -2.476 -1.353 3.224 8.535 0.781 28.920 13 AA_DA13DC14:DG23DT24_FF A 13 ? F 24 ? A 14 ? F 23 ? 1 A DC 14 1_555 E DG 5 1_555 A DC 15 1_555 E DG 4 1_555 0.567 -0.983 3.492 0.584 4.090 39.368 -1.957 -0.765 3.384 6.051 -0.864 39.576 14 AA_DC14DC15:DG22DG23_FF A 14 ? F 23 ? A 15 ? F 22 ? 1 A DC 15 1_555 E DG 4 1_555 A DT 16 1_555 E DA 3 1_555 -0.679 -0.316 3.301 1.843 1.093 29.181 -0.862 1.744 3.239 2.165 -3.652 29.258 15 AA_DC15DT16:DA21DG22_FF A 15 ? F 22 ? A 16 ? F 21 ? 1 A DT 16 1_555 E DA 3 1_555 A DC 17 1_555 E DG 2 1_555 0.839 0.026 3.402 0.891 -1.130 37.630 0.194 -1.179 3.418 -1.751 -1.380 37.657 16 AA_DT16DC17:DG20DA21_FF A 16 ? F 21 ? A 17 ? F 20 ? 1 A DC 17 1_555 E DG 2 1_555 A DC 18 1_555 E DG 1 1_555 0.079 0.888 6.628 3.993 -3.058 3.955 35.342 35.047 3.724 -31.522 -41.159 6.398 17 AA_DC17DC18:DG19DG20_FF A 17 ? F 20 ? A 18 ? F 19 ? 1 B DG 3 1_555 F DC 16 1_555 B DT 4 1_555 F DA 15 1_555 -0.337 -0.287 3.122 -4.581 4.879 20.251 -2.690 -0.885 2.975 13.411 12.591 21.318 18 BB_DG3DT4:DA33DC34_EE B 3 ? E 34 ? B 4 ? E 33 ? 1 B DT 4 1_555 F DA 15 1_555 B DG 5 1_555 F DC 14 1_555 -0.022 -0.040 3.347 -1.144 4.090 42.963 -0.465 -0.085 3.330 5.568 1.558 43.163 19 BB_DT4DG5:DC32DA33_EE B 4 ? E 33 ? B 5 ? E 32 ? 1 B DG 5 1_555 F DC 14 1_555 B DT 6 1_555 F DA 13 1_555 -0.144 -0.782 3.311 0.530 1.250 34.186 -1.528 0.329 3.279 2.126 -0.901 34.212 20 BB_DG5DT6:DA31DC32_EE B 5 ? E 32 ? B 6 ? E 31 ? 1 B DT 6 1_555 F DA 13 1_555 B DT 7 1_555 F DA 12 1_555 -0.427 -0.506 3.369 0.176 -0.265 36.043 -0.779 0.716 3.371 -0.428 -0.284 36.044 21 BB_DT6DT7:DA30DA31_EE B 6 ? E 31 ? B 7 ? E 30 ? 1 B DT 7 1_555 F DA 12 1_555 B DT 8 1_555 F DA 11 1_555 0.216 -0.086 3.273 0.204 3.333 39.118 -0.524 -0.297 3.257 4.967 -0.304 39.254 22 BB_DT7DT8:DA29DA30_EE B 7 ? E 30 ? B 8 ? E 29 ? 1 B DT 8 1_555 F DA 11 1_555 B DT 9 1_555 F DA 10 1_555 -0.389 0.031 3.318 -0.215 5.772 32.321 -0.951 0.652 3.277 10.266 0.382 32.820 23 BB_DT8DT9:DA28DA29_EE B 8 ? E 29 ? B 9 ? E 28 ? 1 B DT 9 1_555 F DA 10 1_555 B DA 10 1_555 F DT 9 1_555 0.913 -0.249 3.298 1.145 4.678 35.950 -1.060 -1.305 3.267 7.537 -1.844 36.261 24 BB_DT9DA10:DT27DA28_EE B 9 ? E 28 ? B 10 ? E 27 ? 1 B DA 10 1_555 F DT 9 1_555 B 5CM 11 1_555 F DG 8 1_555 -0.426 -0.701 3.263 5.190 -2.368 29.521 -0.868 1.880 3.188 -4.594 -10.067 30.055 25 BB_DA105CM11:DG26DT27_EE B 10 ? E 27 ? B 11 ? E 26 ? 1 B 5CM 11 1_555 F DG 8 1_555 B DG 12 1_555 F 5CM 7 1_555 0.006 0.485 3.254 0.661 18.176 32.064 -1.812 0.084 3.085 30.076 -1.094 36.745 26 BB_5CM11DG12:5CM25DG26_EE B 11 ? E 26 ? B 12 ? E 25 ? 1 B DG 12 1_555 F 5CM 7 1_555 B DA 13 1_555 F DT 6 1_555 -0.607 -0.342 3.124 -6.241 3.234 33.248 -1.087 0.072 3.137 5.574 10.758 33.962 27 BB_DG12DA13:DT245CM25_EE B 12 ? E 25 ? B 13 ? E 24 ? 1 B DA 13 1_555 F DT 6 1_555 B DC 14 1_555 F DG 5 1_555 0.624 -0.778 3.368 -0.680 4.239 28.557 -2.513 -1.404 3.206 8.533 1.369 28.871 28 BB_DA13DC14:DG23DT24_EE B 13 ? E 24 ? B 14 ? E 23 ? 1 B DC 14 1_555 F DG 5 1_555 B DC 15 1_555 F DG 4 1_555 0.533 -0.988 3.477 0.331 4.587 39.069 -2.038 -0.751 3.348 6.829 -0.492 39.328 29 BB_DC14DC15:DG22DG23_EE B 14 ? E 23 ? B 15 ? E 22 ? 1 B DC 15 1_555 F DG 4 1_555 B DT 16 1_555 F DA 3 1_555 -0.696 -0.326 3.275 2.106 1.728 28.559 -1.044 1.874 3.191 3.492 -4.257 28.686 30 BB_DC15DT16:DA21DG22_EE B 15 ? E 22 ? B 16 ? E 21 ? 1 B DT 16 1_555 F DA 3 1_555 B DC 17 1_555 F DG 2 1_555 0.819 0.023 3.412 0.937 -1.011 37.466 0.174 -1.146 3.429 -1.573 -1.458 37.490 31 BB_DT16DC17:DG20DA21_EE B 16 ? E 21 ? B 17 ? E 20 ? 1 B DC 17 1_555 F DG 2 1_555 B DC 18 1_555 F DG 1 1_555 0.319 1.007 6.667 5.581 -5.399 7.043 23.708 17.062 4.135 -33.274 -34.393 10.480 32 BB_DC17DC18:DG19DG20_EE B 17 ? E 20 ? B 18 ? E 19 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5EEA _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5LTY _atom_sites.fract_transf_matrix[1][1] 0.014518 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002159 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008395 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P # loop_