HEADER HYDROLASE 14-SEP-16 5LVX
TITLE CRYSTAL STRUCTURE OF GLUCOCEREBROSIDASE WITH AN INHIBITORY QUINAZOLINE
TITLE 2 MODULATOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLUCOSYLCERAMIDASE;
COMPND 3 CHAIN: A, B, C, D;
COMPND 4 SYNONYM: ACID BETA-GLUCOSIDASE,ALGLUCERASE,BETA-GLUCOCEREBROSIDASE,
COMPND 5 BETA-GC,D-GLUCOSYL-N-ACYLSPHINGOSINE GLUCOHYDROLASE,IMIGLUCERASE;
COMPND 6 EC: 3.2.1.45;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: GBA, GC, GLUC;
SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606;
SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HT1080
KEYWDS GCASE, HYDROLASE, GLYCOPROTEIN, GLYCOSIDASE, GLUCOSYLCERAMIDASE,
KEYWDS 2 PROT, PROTEROS BIOSTRUCTURES GMBH
EXPDTA X-RAY DIFFRACTION
AUTHOR J.ZHENG,L.CHEN,O.S.SKINNER,P.LANSBURY,R.SKERLJ,M.MROSEK,U.HEUNISCH,
AUTHOR 2 S.KRAPP,S.WEIGAND,J.CHARROW,M.SCHWAKE,N.L.KELLEHER,R.B.SILVERMAN,
AUTHOR 3 D.KRAINC
REVDAT 7 23-OCT-24 5LVX 1 REMARK HETSYN LINK
REVDAT 6 29-JUL-20 5LVX 1 COMPND REMARK HETNAM LINK
REVDAT 6 2 1 SITE ATOM
REVDAT 5 23-MAY-18 5LVX 1 REMARK
REVDAT 4 16-MAY-18 5LVX 1 JRNL
REVDAT 3 09-MAY-18 5LVX 1 JRNL
REVDAT 2 25-APR-18 5LVX 1 REMARK
REVDAT 1 25-OCT-17 5LVX 0
JRNL AUTH J.ZHENG,L.CHEN,O.S.SKINNER,D.YSSELSTEIN,J.REMIS,P.LANSBURY,
JRNL AUTH 2 R.SKERLJ,M.MROSEK,U.HEUNISCH,S.KRAPP,J.CHARROW,M.SCHWAKE,
JRNL AUTH 3 N.L.KELLEHER,R.B.SILVERMAN,D.KRAINC
JRNL TITL BETA-GLUCOCEREBROSIDASE MODULATORS PROMOTE DIMERIZATION OF
JRNL TITL 2 BETA-GLUCOCEREBROSIDASE AND REVEAL AN ALLOSTERIC BINDING
JRNL TITL 3 SITE.
JRNL REF J. AM. CHEM. SOC. V. 140 5914 2018
JRNL REFN ESSN 1520-5126
JRNL PMID 29676907
JRNL DOI 10.1021/JACS.7B13003
REMARK 2
REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0049
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 102.65
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6
REMARK 3 NUMBER OF REFLECTIONS : 123670
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.189
REMARK 3 R VALUE (WORKING SET) : 0.189
REMARK 3 FREE R VALUE : 0.210
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.200
REMARK 3 FREE R VALUE TEST SET COUNT : 1529
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26
REMARK 3 REFLECTION IN BIN (WORKING SET) : 9217
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52
REMARK 3 BIN R VALUE (WORKING SET) : 0.2960
REMARK 3 BIN FREE R VALUE SET COUNT : 125
REMARK 3 BIN FREE R VALUE : 0.3520
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 15714
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 518
REMARK 3 SOLVENT ATOMS : 681
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.37
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.39000
REMARK 3 B22 (A**2) : -1.50000
REMARK 3 B33 (A**2) : 1.78000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.41000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.229
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.146
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.074
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16598 ; 0.008 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 15230 ; 0.004 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 22709 ; 1.545 ; 1.981
REMARK 3 BOND ANGLES OTHERS (DEGREES): 34938 ; 1.056 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1993 ; 6.470 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 689 ;36.328 ;23.208
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2428 ;12.783 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 85 ;16.472 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2496 ; 0.071 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 18465 ; 0.006 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): 3920 ; 0.004 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7969 ; 5.059 ; 5.021
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 7968 ; 5.057 ; 5.021
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9963 ; 6.172 ; 8.462
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 9964 ; 6.172 ; 8.462
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 8629 ; 6.362 ; 5.535
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 8546 ; 6.191 ; 5.502
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 12621 ; 7.926 ; 9.089
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 18535 ; 8.683 ;22.735
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 18316 ; 8.619 ;22.683
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NCS TYPE: LOCAL
REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6
REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT
REMARK 3 1 A 1 497 B 1 497 31100 0.06 0.05
REMARK 3 2 A 1 495 C 1 495 30918 0.06 0.05
REMARK 3 3 A 1 497 D 1 497 31469 0.04 0.05
REMARK 3 4 B 1 495 C 1 495 31112 0.05 0.05
REMARK 3 5 B 1 497 D 1 497 31207 0.05 0.05
REMARK 3 6 C 1 495 D 1 495 30839 0.05 0.05
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 5LVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-SEP-16.
REMARK 100 THE DEPOSITION ID IS D_1200001361.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 16-SEP-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 4.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SLS
REMARK 200 BEAMLINE : X06SA
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.999
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 125199
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200
REMARK 200 RESOLUTION RANGE LOW (A) : 102.650
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5
REMARK 200 DATA REDUNDANCY : 2.200
REMARK 200 R MERGE (I) : 0.06100
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3
REMARK 200 DATA REDUNDANCY IN SHELL : 2.20
REMARK 200 R MERGE FOR SHELL (I) : 0.43100
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 57.34
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20 %W/V PEG 3350 0.2 M (NH4)2SO4 0.1 M
REMARK 280 NA ACET PH=4.50 0.50 %W/V LDAO, PH 4.5, VAPOR DIFFUSION,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 66.14050
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 13670 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 71320 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLN C 497
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 PHE A 31 CG CD1 CD2 CE1 CE2 CZ
REMARK 480 GLN A 57 CD OE1 NE2
REMARK 480 THR A 61 OG1 CG2
REMARK 480 THR A 63 OG1 CG2
REMARK 480 LYS A 106 CE NZ
REMARK 480 GLU A 151 CD OE1 OE2
REMARK 480 GLN A 166 CD OE1 NE2
REMARK 480 GLN A 169 CG CD OE1 NE2
REMARK 480 GLN A 200 CD OE1 NE2
REMARK 480 LYS A 224 NZ
REMARK 480 LYS A 321 CD CE NZ
REMARK 480 LYS A 441 CG CD CE NZ
REMARK 480 LYS A 466 CD CE NZ
REMARK 480 PHE B 31 CG CD1 CD2 CE1 CE2 CZ
REMARK 480 ARG B 47 CZ NH1 NH2
REMARK 480 THR B 63 OG1 CG2
REMARK 480 LYS B 106 NZ
REMARK 480 GLU B 111 CD OE1 OE2
REMARK 480 GLU B 112 CD OE1 OE2
REMARK 480 GLU B 151 CD OE1 OE2
REMARK 480 LYS B 155 CD CE NZ
REMARK 480 GLN B 166 CD OE1 NE2
REMARK 480 GLN B 169 CG CD OE1 NE2
REMARK 480 GLN B 200 CD OE1 NE2
REMARK 480 GLU B 300 CD OE1 OE2
REMARK 480 LYS B 321 CD CE NZ
REMARK 480 ARG B 395 CZ NH1 NH2
REMARK 480 LYS B 466 CG CD CE NZ
REMARK 480 PHE C 31 CG CD1 CD2 CE1 CE2 CZ
REMARK 480 ASN C 59 CG OD1 ND2
REMARK 480 THR C 63 OG1 CG2
REMARK 480 GLU C 72 CG CD OE1 OE2
REMARK 480 GLN C 73 CD OE1 NE2
REMARK 480 LYS C 106 CE NZ
REMARK 480 GLU C 112 CD OE1 OE2
REMARK 480 LYS C 155 CD CE NZ
REMARK 480 GLN C 166 CD OE1 NE2
REMARK 480 GLN C 169 CD OE1 NE2
REMARK 480 GLN C 200 CD OE1 NE2
REMARK 480 LYS C 215 NZ
REMARK 480 LYS C 224 CE NZ
REMARK 480 LYS C 441 CG CD CE NZ
REMARK 480 LYS C 466 CD CE NZ
REMARK 480 ARG C 495 CD NE CZ NH1 NH2
REMARK 480 PHE D 31 CG CD1 CD2 CE1 CE2 CZ
REMARK 480 GLU D 72 CG CD OE1 OE2
REMARK 480 GLN D 73 CG CD OE1 NE2
REMARK 480 GLU D 112 CG CD OE1 OE2
REMARK 480 GLU D 151 CD OE1 OE2
REMARK 480 LYS D 155 CG CD CE NZ
REMARK 480 GLN D 166 CD OE1 NE2
REMARK 480 GLN D 200 CD OE1 NE2
REMARK 480 LYS D 224 CD CE NZ
REMARK 480 ASN D 270 CG OD1 ND2
REMARK 480 LYS D 293 CE NZ
REMARK 480 LYS D 321 CG CD CE NZ
REMARK 480 LYS D 441 CG CD CE NZ
REMARK 480 LYS D 466 CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PHE A 75 -137.29 -127.11
REMARK 500 ALA A 124 -153.04 72.99
REMARK 500 LEU A 156 -66.43 -105.01
REMARK 500 GLU A 233 138.79 178.55
REMARK 500 ASP A 263 -63.18 -123.82
REMARK 500 LEU A 281 -80.12 73.15
REMARK 500 TRP A 381 -133.36 -84.67
REMARK 500 PHE B 75 -137.81 -126.41
REMARK 500 ALA B 124 -154.51 72.02
REMARK 500 THR B 132 50.81 -102.38
REMARK 500 LEU B 156 -65.63 -105.85
REMARK 500 GLU B 233 139.62 178.44
REMARK 500 GLU B 235 64.70 39.13
REMARK 500 ASP B 263 -63.23 -123.84
REMARK 500 LEU B 281 -80.33 73.70
REMARK 500 TRP B 381 -132.69 -83.84
REMARK 500 PHE C 75 -138.59 -126.30
REMARK 500 ALA C 124 -153.11 71.26
REMARK 500 THR C 132 51.68 -102.67
REMARK 500 LEU C 156 -66.30 -105.70
REMARK 500 GLU C 233 139.01 178.16
REMARK 500 ASP C 263 -63.24 -123.87
REMARK 500 LEU C 281 -79.75 74.05
REMARK 500 TRP C 381 -133.48 -83.39
REMARK 500 PHE D 75 -138.59 -126.98
REMARK 500 ALA D 124 -154.18 71.27
REMARK 500 LEU D 156 -66.24 -106.31
REMARK 500 GLU D 233 139.52 178.82
REMARK 500 ASP D 263 -63.26 -123.69
REMARK 500 LEU D 281 -80.11 74.61
REMARK 500 TRP D 381 -133.37 -84.21
REMARK 500
REMARK 500 REMARK: NULL
REMARK 615
REMARK 615 ZERO OCCUPANCY ATOM
REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 615 M RES C SSEQI
REMARK 615 MAN H 4
REMARK 615 MAN H 5
REMARK 615 MAN H 6
DBREF 5LVX A 1 497 UNP P04062 GLCM_HUMAN 20 516
DBREF 5LVX B 1 497 UNP P04062 GLCM_HUMAN 20 516
DBREF 5LVX C 1 497 UNP P04062 GLCM_HUMAN 20 516
DBREF 5LVX D 1 497 UNP P04062 GLCM_HUMAN 20 516
SEQRES 1 A 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER
SEQRES 2 A 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE
SEQRES 3 A 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG
SEQRES 4 A 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER
SEQRES 5 A 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU
SEQRES 6 A 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL
SEQRES 7 A 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU
SEQRES 8 A 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU
SEQRES 9 A 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN
SEQRES 10 A 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE
SEQRES 11 A 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN
SEQRES 12 A 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU
SEQRES 13 A 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN
SEQRES 14 A 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO
SEQRES 15 A 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY
SEQRES 16 A 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR
SEQRES 17 A 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA
SEQRES 18 A 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN
SEQRES 19 A 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN
SEQRES 20 A 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE
SEQRES 21 A 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS
SEQRES 22 A 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU
SEQRES 23 A 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO
SEQRES 24 A 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP
SEQRES 25 A 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY
SEQRES 26 A 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA
SEQRES 27 A 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER
SEQRES 28 A 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER
SEQRES 29 A 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY
SEQRES 30 A 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY
SEQRES 31 A 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE
SEQRES 32 A 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET
SEQRES 33 A 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU
SEQRES 34 A 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN
SEQRES 35 A 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER
SEQRES 36 A 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL
SEQRES 37 A 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU
SEQRES 38 A 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP
SEQRES 39 A 497 ARG ARG GLN
SEQRES 1 B 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER
SEQRES 2 B 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE
SEQRES 3 B 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG
SEQRES 4 B 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER
SEQRES 5 B 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU
SEQRES 6 B 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL
SEQRES 7 B 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU
SEQRES 8 B 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU
SEQRES 9 B 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN
SEQRES 10 B 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE
SEQRES 11 B 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN
SEQRES 12 B 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU
SEQRES 13 B 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN
SEQRES 14 B 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO
SEQRES 15 B 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY
SEQRES 16 B 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR
SEQRES 17 B 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA
SEQRES 18 B 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN
SEQRES 19 B 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN
SEQRES 20 B 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE
SEQRES 21 B 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS
SEQRES 22 B 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU
SEQRES 23 B 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO
SEQRES 24 B 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP
SEQRES 25 B 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY
SEQRES 26 B 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA
SEQRES 27 B 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER
SEQRES 28 B 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER
SEQRES 29 B 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY
SEQRES 30 B 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY
SEQRES 31 B 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE
SEQRES 32 B 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET
SEQRES 33 B 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU
SEQRES 34 B 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN
SEQRES 35 B 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER
SEQRES 36 B 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL
SEQRES 37 B 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU
SEQRES 38 B 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP
SEQRES 39 B 497 ARG ARG GLN
SEQRES 1 C 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER
SEQRES 2 C 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE
SEQRES 3 C 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG
SEQRES 4 C 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER
SEQRES 5 C 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU
SEQRES 6 C 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL
SEQRES 7 C 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU
SEQRES 8 C 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU
SEQRES 9 C 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN
SEQRES 10 C 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE
SEQRES 11 C 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN
SEQRES 12 C 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU
SEQRES 13 C 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN
SEQRES 14 C 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO
SEQRES 15 C 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY
SEQRES 16 C 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR
SEQRES 17 C 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA
SEQRES 18 C 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN
SEQRES 19 C 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN
SEQRES 20 C 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE
SEQRES 21 C 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS
SEQRES 22 C 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU
SEQRES 23 C 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO
SEQRES 24 C 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP
SEQRES 25 C 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY
SEQRES 26 C 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA
SEQRES 27 C 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER
SEQRES 28 C 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER
SEQRES 29 C 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY
SEQRES 30 C 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY
SEQRES 31 C 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE
SEQRES 32 C 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET
SEQRES 33 C 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU
SEQRES 34 C 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN
SEQRES 35 C 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER
SEQRES 36 C 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL
SEQRES 37 C 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU
SEQRES 38 C 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP
SEQRES 39 C 497 ARG ARG GLN
SEQRES 1 D 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER
SEQRES 2 D 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE
SEQRES 3 D 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG
SEQRES 4 D 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER
SEQRES 5 D 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU
SEQRES 6 D 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL
SEQRES 7 D 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU
SEQRES 8 D 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU
SEQRES 9 D 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN
SEQRES 10 D 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE
SEQRES 11 D 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN
SEQRES 12 D 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU
SEQRES 13 D 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN
SEQRES 14 D 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO
SEQRES 15 D 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY
SEQRES 16 D 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR
SEQRES 17 D 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA
SEQRES 18 D 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN
SEQRES 19 D 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN
SEQRES 20 D 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE
SEQRES 21 D 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS
SEQRES 22 D 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU
SEQRES 23 D 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO
SEQRES 24 D 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP
SEQRES 25 D 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY
SEQRES 26 D 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA
SEQRES 27 D 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER
SEQRES 28 D 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER
SEQRES 29 D 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY
SEQRES 30 D 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY
SEQRES 31 D 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE
SEQRES 32 D 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET
SEQRES 33 D 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU
SEQRES 34 D 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN
SEQRES 35 D 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER
SEQRES 36 D 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL
SEQRES 37 D 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU
SEQRES 38 D 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP
SEQRES 39 D 497 ARG ARG GLN
MODRES 5LVX NAG E 2 NAG -D
MODRES 5LVX MAN E 4 MAN -D
MODRES 5LVX MAN E 5 MAN -D
MODRES 5LVX MAN E 6 MAN -D
MODRES 5LVX NAG F 2 NAG -D
MODRES 5LVX NAG G 2 NAG -D
MODRES 5LVX MAN G 4 MAN -D
MODRES 5LVX MAN G 5 MAN -D
MODRES 5LVX NAG H 2 NAG -D
MODRES 5LVX MAN H 4 MAN -D
MODRES 5LVX MAN H 5 MAN -D
MODRES 5LVX MAN H 6 MAN -D
HET NAG E 1 14
HET NAG E 2 14
HET BMA E 3 11
HET MAN E 4 11
HET MAN E 5 11
HET MAN E 6 11
HET NAG F 1 14
HET NAG F 2 14
HET NAG G 1 14
HET NAG G 2 14
HET BMA G 3 11
HET MAN G 4 11
HET MAN G 5 11
HET NAG H 1 14
HET NAG H 2 14
HET BMA H 3 11
HET MAN H 4 11
HET MAN H 5 11
HET MAN H 6 11
HET 79B A 507 38
HET PO4 A 508 5
HET PO4 A 509 5
HET PO4 A 510 5
HET PO4 A 511 5
HET PO4 A 512 5
HET PO4 A 513 5
HET NAG B 503 14
HET 7E4 B 504 38
HET PO4 B 505 5
HET PO4 B 506 5
HET PO4 B 507 5
HET PO4 B 508 5
HET PO4 B 509 5
HET 7E4 C 506 38
HET PO4 C 507 5
HET PO4 C 508 5
HET PO4 C 509 5
HET PO4 C 510 5
HET PO4 C 511 5
HET NAG D 507 14
HET 79B D 508 38
HET PO4 D 509 5
HET PO4 D 510 5
HET PO4 D 511 5
HET PO4 D 512 5
HET PO4 D 513 5
HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
HETNAM BMA BETA-D-MANNOPYRANOSE
HETNAM MAN ALPHA-D-MANNOPYRANOSE
HETNAM 79B 11-[(2~{R})-2-[(2-PYRIDIN-3-YLQUINAZOLIN-4-YL)AMINO]-2,
HETNAM 2 79B 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC ACID
HETNAM PO4 PHOSPHATE ION
HETNAM 7E4 11-[(2~{S})-2-[(2-PYRIDIN-3-YLQUINAZOLIN-4-YL)AMINO]-2,
HETNAM 2 7E4 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC ACID
HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-
HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO-
HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE
HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE
HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE
FORMUL 5 NAG 10(C8 H15 N O6)
FORMUL 5 BMA 3(C6 H12 O6)
FORMUL 5 MAN 8(C6 H12 O6)
FORMUL 9 79B 2(C33 H34 N4 O2)
FORMUL 10 PO4 21(O4 P 3-)
FORMUL 17 7E4 2(C33 H34 N4 O2)
FORMUL 36 HOH *681(H2 O)
HELIX 1 AA1 THR A 86 ALA A 95 1 10
HELIX 2 AA2 SER A 97 SER A 110 1 14
HELIX 3 AA3 PRO A 150 LYS A 155 1 6
HELIX 4 AA4 LEU A 156 ALA A 168 1 13
HELIX 5 AA5 PRO A 182 LYS A 186 5 5
HELIX 6 AA6 ASP A 203 HIS A 223 1 21
HELIX 7 AA7 SER A 237 LEU A 241 5 5
HELIX 8 AA8 THR A 252 ASP A 263 1 12
HELIX 9 AA9 ASP A 263 ASN A 270 1 8
HELIX 10 AB1 LEU A 286 LEU A 288 5 3
HELIX 11 AB2 PRO A 289 THR A 297 1 9
HELIX 12 AB3 ASP A 298 LYS A 303 1 6
HELIX 13 AB4 LEU A 314 ALA A 318 5 5
HELIX 14 AB5 PRO A 319 PHE A 331 1 13
HELIX 15 AB6 SER A 356 TYR A 373 1 18
HELIX 16 AB7 ILE A 406 ASP A 409 5 4
HELIX 17 AB8 GLN A 414 LYS A 425 1 12
HELIX 18 AB9 THR B 86 ALA B 95 1 10
HELIX 19 AC1 SER B 97 SER B 110 1 14
HELIX 20 AC2 PRO B 150 LYS B 155 1 6
HELIX 21 AC3 LEU B 156 ALA B 168 1 13
HELIX 22 AC4 PRO B 182 LYS B 186 5 5
HELIX 23 AC5 ASP B 203 HIS B 223 1 21
HELIX 24 AC6 SER B 237 LEU B 241 5 5
HELIX 25 AC7 THR B 252 ASP B 263 1 12
HELIX 26 AC8 ASP B 263 ASN B 270 1 8
HELIX 27 AC9 LEU B 286 LEU B 288 5 3
HELIX 28 AD1 PRO B 289 THR B 297 1 9
HELIX 29 AD2 ASP B 298 LYS B 303 1 6
HELIX 30 AD3 LEU B 314 ALA B 318 5 5
HELIX 31 AD4 PRO B 319 PHE B 331 1 13
HELIX 32 AD5 SER B 356 LEU B 372 1 17
HELIX 33 AD6 ILE B 406 ASP B 409 5 4
HELIX 34 AD7 GLN B 414 LYS B 425 1 12
HELIX 35 AD8 THR C 86 ALA C 95 1 10
HELIX 36 AD9 SER C 97 SER C 110 1 14
HELIX 37 AE1 PRO C 150 LYS C 155 1 6
HELIX 38 AE2 LEU C 156 ALA C 168 1 13
HELIX 39 AE3 PRO C 182 LYS C 186 5 5
HELIX 40 AE4 ASP C 203 HIS C 223 1 21
HELIX 41 AE5 SER C 237 LEU C 241 5 5
HELIX 42 AE6 THR C 252 ASP C 263 1 12
HELIX 43 AE7 ASP C 263 ASN C 270 1 8
HELIX 44 AE8 LEU C 286 LEU C 288 5 3
HELIX 45 AE9 PRO C 289 THR C 297 1 9
HELIX 46 AF1 ASP C 298 LYS C 303 1 6
HELIX 47 AF2 LEU C 314 ALA C 318 5 5
HELIX 48 AF3 PRO C 319 PHE C 331 1 13
HELIX 49 AF4 SER C 356 TYR C 373 1 18
HELIX 50 AF5 ILE C 406 ASP C 409 5 4
HELIX 51 AF6 GLN C 414 LYS C 425 1 12
HELIX 52 AF7 THR D 86 ALA D 95 1 10
HELIX 53 AF8 SER D 97 SER D 110 1 14
HELIX 54 AF9 PRO D 150 LYS D 155 1 6
HELIX 55 AG1 LEU D 156 ALA D 168 1 13
HELIX 56 AG2 PRO D 182 LYS D 186 5 5
HELIX 57 AG3 ASP D 203 HIS D 223 1 21
HELIX 58 AG4 SER D 237 LEU D 241 5 5
HELIX 59 AG5 THR D 252 ASP D 263 1 12
HELIX 60 AG6 ASP D 263 ASN D 270 1 8
HELIX 61 AG7 LEU D 286 LEU D 288 5 3
HELIX 62 AG8 PRO D 289 THR D 297 1 9
HELIX 63 AG9 ASP D 298 LYS D 303 1 6
HELIX 64 AH1 LEU D 314 ALA D 318 5 5
HELIX 65 AH2 PRO D 319 PHE D 331 1 13
HELIX 66 AH3 SER D 356 TYR D 373 1 18
HELIX 67 AH4 ILE D 406 ASP D 409 5 4
HELIX 68 AH5 GLN D 414 LYS D 425 1 12
SHEET 1 AA1 4 PRO A 6 LYS A 7 0
SHEET 2 AA1 4 VAL A 15 CYS A 18 -1 O VAL A 15 N LYS A 7
SHEET 3 AA1 4 THR A 410 LYS A 413 -1 O PHE A 411 N CYS A 18
SHEET 4 AA1 4 ILE A 402 ASP A 405 -1 N ASP A 405 O THR A 410
SHEET 1 AA2 9 GLU A 50 PRO A 55 0
SHEET 2 AA2 9 THR A 36 THR A 43 -1 N GLU A 41 O GLU A 50
SHEET 3 AA2 9 SER A 488 TRP A 494 -1 O LEU A 493 N SER A 38
SHEET 4 AA2 9 ALA A 456 ASN A 462 -1 N VAL A 458 O TYR A 492
SHEET 5 AA2 9 LEU A 444 MET A 450 -1 N ASP A 445 O LEU A 461
SHEET 6 AA2 9 GLN A 432 ALA A 438 -1 N GLN A 432 O MET A 450
SHEET 7 AA2 9 LEU A 65 LYS A 77 -1 N THR A 68 O VAL A 437
SHEET 8 AA2 9 VAL A 468 ASP A 474 1 O THR A 471 N LEU A 67
SHEET 9 AA2 9 GLY A 478 SER A 484 -1 O GLY A 478 N ASP A 474
SHEET 1 AA3 9 GLY A 80 ALA A 84 0
SHEET 2 AA3 9 ILE A 118 MET A 123 1 O ARG A 120 N GLY A 83
SHEET 3 AA3 9 SER A 173 PRO A 178 1 O LEU A 175 N VAL A 121
SHEET 4 AA3 9 ALA A 229 THR A 231 1 O THR A 231 N ALA A 176
SHEET 5 AA3 9 ARG A 277 GLN A 284 1 O LEU A 279 N VAL A 230
SHEET 6 AA3 9 GLY A 307 HIS A 311 1 O ALA A 309 N MET A 280
SHEET 7 AA3 9 MET A 335 GLU A 340 1 O MET A 335 N ILE A 308
SHEET 8 AA3 9 VAL A 375 ASN A 382 1 O VAL A 376 N LEU A 336
SHEET 9 AA3 9 GLY A 80 ALA A 84 1 N GLY A 82 O ASP A 380
SHEET 1 AA4 4 PRO B 6 LYS B 7 0
SHEET 2 AA4 4 VAL B 15 CYS B 18 -1 O VAL B 15 N LYS B 7
SHEET 3 AA4 4 THR B 410 LYS B 413 -1 O PHE B 411 N CYS B 18
SHEET 4 AA4 4 ILE B 402 ASP B 405 -1 N ASP B 405 O THR B 410
SHEET 1 AA5 9 GLU B 50 PRO B 55 0
SHEET 2 AA5 9 THR B 36 THR B 43 -1 N ARG B 39 O SER B 52
SHEET 3 AA5 9 SER B 488 TRP B 494 -1 O LEU B 493 N SER B 38
SHEET 4 AA5 9 ALA B 456 ASN B 462 -1 N VAL B 458 O TYR B 492
SHEET 5 AA5 9 LEU B 444 MET B 450 -1 N ASP B 445 O LEU B 461
SHEET 6 AA5 9 GLN B 432 ALA B 438 -1 N GLN B 432 O MET B 450
SHEET 7 AA5 9 LEU B 65 LYS B 77 -1 N THR B 68 O VAL B 437
SHEET 8 AA5 9 VAL B 468 ASP B 474 1 O THR B 471 N LEU B 67
SHEET 9 AA5 9 GLY B 478 SER B 484 -1 O GLY B 478 N ASP B 474
SHEET 1 AA6 9 GLY B 80 ALA B 84 0
SHEET 2 AA6 9 ILE B 118 MET B 123 1 O ARG B 120 N GLY B 83
SHEET 3 AA6 9 SER B 173 PRO B 178 1 O LEU B 175 N VAL B 121
SHEET 4 AA6 9 ALA B 229 THR B 231 1 O THR B 231 N ALA B 176
SHEET 5 AA6 9 ARG B 277 GLN B 284 1 O LEU B 279 N VAL B 230
SHEET 6 AA6 9 GLY B 307 HIS B 311 1 O ALA B 309 N MET B 280
SHEET 7 AA6 9 MET B 335 GLU B 340 1 O MET B 335 N ILE B 308
SHEET 8 AA6 9 VAL B 375 ASN B 382 1 O VAL B 376 N LEU B 336
SHEET 9 AA6 9 GLY B 80 ALA B 84 1 N GLY B 82 O ASP B 380
SHEET 1 AA7 4 PRO C 6 LYS C 7 0
SHEET 2 AA7 4 VAL C 15 CYS C 18 -1 O VAL C 15 N LYS C 7
SHEET 3 AA7 4 THR C 410 LYS C 413 -1 O PHE C 411 N CYS C 18
SHEET 4 AA7 4 ILE C 402 ASP C 405 -1 N ASP C 405 O THR C 410
SHEET 1 AA8 9 GLU C 50 PRO C 55 0
SHEET 2 AA8 9 THR C 36 THR C 43 -1 N ARG C 39 O SER C 52
SHEET 3 AA8 9 SER C 488 TRP C 494 -1 O LEU C 493 N SER C 38
SHEET 4 AA8 9 ALA C 456 ASN C 462 -1 N VAL C 458 O TYR C 492
SHEET 5 AA8 9 LEU C 444 MET C 450 -1 N ASP C 445 O LEU C 461
SHEET 6 AA8 9 GLN C 432 ALA C 438 -1 N GLN C 432 O MET C 450
SHEET 7 AA8 9 LEU C 65 LYS C 77 -1 N THR C 68 O VAL C 437
SHEET 8 AA8 9 VAL C 468 ASP C 474 1 O THR C 471 N LEU C 67
SHEET 9 AA8 9 GLY C 478 SER C 484 -1 O GLY C 478 N ASP C 474
SHEET 1 AA9 9 GLY C 80 ALA C 84 0
SHEET 2 AA9 9 ILE C 118 MET C 123 1 O ARG C 120 N GLY C 83
SHEET 3 AA9 9 SER C 173 PRO C 178 1 O LEU C 175 N VAL C 121
SHEET 4 AA9 9 ALA C 229 THR C 231 1 O THR C 231 N ALA C 176
SHEET 5 AA9 9 ARG C 277 GLN C 284 1 O LEU C 279 N VAL C 230
SHEET 6 AA9 9 GLY C 307 HIS C 311 1 O ALA C 309 N MET C 280
SHEET 7 AA9 9 MET C 335 GLU C 340 1 O MET C 335 N ILE C 308
SHEET 8 AA9 9 VAL C 375 ASN C 382 1 O VAL C 376 N LEU C 336
SHEET 9 AA9 9 GLY C 80 ALA C 84 1 N GLY C 82 O ASP C 380
SHEET 1 AB1 4 PRO D 6 LYS D 7 0
SHEET 2 AB1 4 VAL D 15 CYS D 18 -1 O VAL D 15 N LYS D 7
SHEET 3 AB1 4 THR D 410 LYS D 413 -1 O PHE D 411 N CYS D 18
SHEET 4 AB1 4 ILE D 402 ASP D 405 -1 N ASP D 405 O THR D 410
SHEET 1 AB2 9 GLU D 50 PRO D 55 0
SHEET 2 AB2 9 THR D 36 THR D 43 -1 N ARG D 39 O SER D 52
SHEET 3 AB2 9 SER D 488 TRP D 494 -1 O LEU D 493 N SER D 38
SHEET 4 AB2 9 ALA D 456 ASN D 462 -1 N VAL D 458 O TYR D 492
SHEET 5 AB2 9 LEU D 444 MET D 450 -1 N ASP D 445 O LEU D 461
SHEET 6 AB2 9 GLN D 432 ALA D 438 -1 N GLN D 432 O MET D 450
SHEET 7 AB2 9 LEU D 65 LYS D 77 -1 N THR D 68 O VAL D 437
SHEET 8 AB2 9 VAL D 468 ASP D 474 1 O THR D 471 N LEU D 67
SHEET 9 AB2 9 GLY D 478 SER D 484 -1 O GLY D 478 N ASP D 474
SHEET 1 AB3 9 GLY D 80 ALA D 84 0
SHEET 2 AB3 9 ILE D 118 MET D 123 1 O ARG D 120 N GLY D 83
SHEET 3 AB3 9 SER D 173 PRO D 178 1 O LEU D 175 N VAL D 121
SHEET 4 AB3 9 ALA D 229 THR D 231 1 O THR D 231 N ALA D 176
SHEET 5 AB3 9 ARG D 277 GLN D 284 1 O LEU D 279 N VAL D 230
SHEET 6 AB3 9 GLY D 307 HIS D 311 1 O ALA D 309 N MET D 280
SHEET 7 AB3 9 MET D 335 GLU D 340 1 O MET D 335 N ILE D 308
SHEET 8 AB3 9 VAL D 375 ASN D 382 1 O VAL D 376 N LEU D 336
SHEET 9 AB3 9 GLY D 80 ALA D 84 1 N GLY D 82 O ASP D 380
SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.10
SSBOND 2 CYS A 18 CYS A 23 1555 1555 2.11
SSBOND 3 CYS B 4 CYS B 16 1555 1555 2.06
SSBOND 4 CYS B 18 CYS B 23 1555 1555 2.12
SSBOND 5 CYS C 4 CYS C 16 1555 1555 2.08
SSBOND 6 CYS C 18 CYS C 23 1555 1555 2.13
SSBOND 7 CYS D 4 CYS D 16 1555 1555 2.08
SSBOND 8 CYS D 18 CYS D 23 1555 1555 2.11
LINK ND2 ASN A 19 C1 NAG E 1 1555 1555 1.44
LINK NZ LYS A 346 C2 79B A 507 1555 1555 1.34
LINK ND2 ASN B 19 C1 NAG F 1 1555 1555 1.45
LINK ND2 ASN B 146 C1 NAG B 503 1555 1555 1.46
LINK NZ LYS B 346 C2 7E4 B 504 1555 1555 1.34
LINK ND2 ASN C 19 C1 NAG G 1 1555 1555 1.46
LINK NZ LYS C 346 C2 7E4 C 506 1555 1555 1.33
LINK ND2 ASN D 19 C1 NAG H 1 1555 1555 1.44
LINK ND2 ASN D 146 C1 NAG D 507 1555 1555 1.47
LINK NZ LYS D 346 C2 79B D 508 1555 1555 1.35
LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43
LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45
LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.46
LINK O2 MAN E 4 C1 MAN E 5 1555 1555 1.44
LINK O2 MAN E 5 C1 MAN E 6 1555 1555 1.44
LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44
LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.43
LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45
LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.44
LINK O6 BMA G 3 C1 MAN G 5 1555 1555 1.44
LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44
LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.44
LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.45
LINK O2 MAN H 4 C1 MAN H 5 1555 1555 1.45
LINK O2 MAN H 5 C1 MAN H 6 1555 1555 1.44
CISPEP 1 LEU A 288 PRO A 289 0 2.72
CISPEP 2 GLY A 390 PRO A 391 0 5.12
CISPEP 3 LEU B 288 PRO B 289 0 -0.22
CISPEP 4 GLY B 390 PRO B 391 0 3.96
CISPEP 5 LEU C 288 PRO C 289 0 0.68
CISPEP 6 GLY C 390 PRO C 391 0 4.20
CISPEP 7 LEU D 288 PRO D 289 0 2.34
CISPEP 8 GLY D 390 PRO D 391 0 4.09
CRYST1 94.910 132.281 103.085 90.00 95.26 90.00 P 1 21 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010536 0.000000 0.000969 0.00000
SCALE2 0.000000 0.007560 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009742 0.00000