HEADER HYDROLASE 14-SEP-16 5LVX TITLE CRYSTAL STRUCTURE OF GLUCOCEREBROSIDASE WITH AN INHIBITORY QUINAZOLINE TITLE 2 MODULATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSYLCERAMIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: ACID BETA-GLUCOSIDASE,ALGLUCERASE,BETA-GLUCOCEREBROSIDASE, COMPND 5 BETA-GC,D-GLUCOSYL-N-ACYLSPHINGOSINE GLUCOHYDROLASE,IMIGLUCERASE; COMPND 6 EC: 3.2.1.45; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GBA, GC, GLUC; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HT1080 KEYWDS GCASE, HYDROLASE, GLYCOPROTEIN, GLYCOSIDASE, GLUCOSYLCERAMIDASE, KEYWDS 2 PROT, PROTEROS BIOSTRUCTURES GMBH EXPDTA X-RAY DIFFRACTION AUTHOR J.ZHENG,L.CHEN,O.S.SKINNER,P.LANSBURY,R.SKERLJ,M.MROSEK,U.HEUNISCH, AUTHOR 2 S.KRAPP,S.WEIGAND,J.CHARROW,M.SCHWAKE,N.L.KELLEHER,R.B.SILVERMAN, AUTHOR 3 D.KRAINC REVDAT 7 23-OCT-24 5LVX 1 REMARK HETSYN LINK REVDAT 6 29-JUL-20 5LVX 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 23-MAY-18 5LVX 1 REMARK REVDAT 4 16-MAY-18 5LVX 1 JRNL REVDAT 3 09-MAY-18 5LVX 1 JRNL REVDAT 2 25-APR-18 5LVX 1 REMARK REVDAT 1 25-OCT-17 5LVX 0 JRNL AUTH J.ZHENG,L.CHEN,O.S.SKINNER,D.YSSELSTEIN,J.REMIS,P.LANSBURY, JRNL AUTH 2 R.SKERLJ,M.MROSEK,U.HEUNISCH,S.KRAPP,J.CHARROW,M.SCHWAKE, JRNL AUTH 3 N.L.KELLEHER,R.B.SILVERMAN,D.KRAINC JRNL TITL BETA-GLUCOCEREBROSIDASE MODULATORS PROMOTE DIMERIZATION OF JRNL TITL 2 BETA-GLUCOCEREBROSIDASE AND REVEAL AN ALLOSTERIC BINDING JRNL TITL 3 SITE. JRNL REF J. AM. CHEM. SOC. V. 140 5914 2018 JRNL REFN ESSN 1520-5126 JRNL PMID 29676907 JRNL DOI 10.1021/JACS.7B13003 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 102.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 123670 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1529 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9217 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 125 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15714 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 518 REMARK 3 SOLVENT ATOMS : 681 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : -1.50000 REMARK 3 B33 (A**2) : 1.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.41000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.229 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.146 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.074 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16598 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 15230 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 22709 ; 1.545 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 34938 ; 1.056 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1993 ; 6.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 689 ;36.328 ;23.208 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2428 ;12.783 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 85 ;16.472 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2496 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 18465 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 3920 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7969 ; 5.059 ; 5.021 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 7968 ; 5.057 ; 5.021 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9963 ; 6.172 ; 8.462 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 9964 ; 6.172 ; 8.462 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 8629 ; 6.362 ; 5.535 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 8546 ; 6.191 ; 5.502 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 12621 ; 7.926 ; 9.089 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 18535 ; 8.683 ;22.735 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 18316 ; 8.619 ;22.683 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 497 B 1 497 31100 0.06 0.05 REMARK 3 2 A 1 495 C 1 495 30918 0.06 0.05 REMARK 3 3 A 1 497 D 1 497 31469 0.04 0.05 REMARK 3 4 B 1 495 C 1 495 31112 0.05 0.05 REMARK 3 5 B 1 497 D 1 497 31207 0.05 0.05 REMARK 3 6 C 1 495 D 1 495 30839 0.05 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5LVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 125199 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 102.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 %W/V PEG 3350 0.2 M (NH4)2SO4 0.1 M REMARK 280 NA ACET PH=4.50 0.50 %W/V LDAO, PH 4.5, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 66.14050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN C 497 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 PHE A 31 CG CD1 CD2 CE1 CE2 CZ REMARK 480 GLN A 57 CD OE1 NE2 REMARK 480 THR A 61 OG1 CG2 REMARK 480 THR A 63 OG1 CG2 REMARK 480 LYS A 106 CE NZ REMARK 480 GLU A 151 CD OE1 OE2 REMARK 480 GLN A 166 CD OE1 NE2 REMARK 480 GLN A 169 CG CD OE1 NE2 REMARK 480 GLN A 200 CD OE1 NE2 REMARK 480 LYS A 224 NZ REMARK 480 LYS A 321 CD CE NZ REMARK 480 LYS A 441 CG CD CE NZ REMARK 480 LYS A 466 CD CE NZ REMARK 480 PHE B 31 CG CD1 CD2 CE1 CE2 CZ REMARK 480 ARG B 47 CZ NH1 NH2 REMARK 480 THR B 63 OG1 CG2 REMARK 480 LYS B 106 NZ REMARK 480 GLU B 111 CD OE1 OE2 REMARK 480 GLU B 112 CD OE1 OE2 REMARK 480 GLU B 151 CD OE1 OE2 REMARK 480 LYS B 155 CD CE NZ REMARK 480 GLN B 166 CD OE1 NE2 REMARK 480 GLN B 169 CG CD OE1 NE2 REMARK 480 GLN B 200 CD OE1 NE2 REMARK 480 GLU B 300 CD OE1 OE2 REMARK 480 LYS B 321 CD CE NZ REMARK 480 ARG B 395 CZ NH1 NH2 REMARK 480 LYS B 466 CG CD CE NZ REMARK 480 PHE C 31 CG CD1 CD2 CE1 CE2 CZ REMARK 480 ASN C 59 CG OD1 ND2 REMARK 480 THR C 63 OG1 CG2 REMARK 480 GLU C 72 CG CD OE1 OE2 REMARK 480 GLN C 73 CD OE1 NE2 REMARK 480 LYS C 106 CE NZ REMARK 480 GLU C 112 CD OE1 OE2 REMARK 480 LYS C 155 CD CE NZ REMARK 480 GLN C 166 CD OE1 NE2 REMARK 480 GLN C 169 CD OE1 NE2 REMARK 480 GLN C 200 CD OE1 NE2 REMARK 480 LYS C 215 NZ REMARK 480 LYS C 224 CE NZ REMARK 480 LYS C 441 CG CD CE NZ REMARK 480 LYS C 466 CD CE NZ REMARK 480 ARG C 495 CD NE CZ NH1 NH2 REMARK 480 PHE D 31 CG CD1 CD2 CE1 CE2 CZ REMARK 480 GLU D 72 CG CD OE1 OE2 REMARK 480 GLN D 73 CG CD OE1 NE2 REMARK 480 GLU D 112 CG CD OE1 OE2 REMARK 480 GLU D 151 CD OE1 OE2 REMARK 480 LYS D 155 CG CD CE NZ REMARK 480 GLN D 166 CD OE1 NE2 REMARK 480 GLN D 200 CD OE1 NE2 REMARK 480 LYS D 224 CD CE NZ REMARK 480 ASN D 270 CG OD1 ND2 REMARK 480 LYS D 293 CE NZ REMARK 480 LYS D 321 CG CD CE NZ REMARK 480 LYS D 441 CG CD CE NZ REMARK 480 LYS D 466 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 75 -137.29 -127.11 REMARK 500 ALA A 124 -153.04 72.99 REMARK 500 LEU A 156 -66.43 -105.01 REMARK 500 GLU A 233 138.79 178.55 REMARK 500 ASP A 263 -63.18 -123.82 REMARK 500 LEU A 281 -80.12 73.15 REMARK 500 TRP A 381 -133.36 -84.67 REMARK 500 PHE B 75 -137.81 -126.41 REMARK 500 ALA B 124 -154.51 72.02 REMARK 500 THR B 132 50.81 -102.38 REMARK 500 LEU B 156 -65.63 -105.85 REMARK 500 GLU B 233 139.62 178.44 REMARK 500 GLU B 235 64.70 39.13 REMARK 500 ASP B 263 -63.23 -123.84 REMARK 500 LEU B 281 -80.33 73.70 REMARK 500 TRP B 381 -132.69 -83.84 REMARK 500 PHE C 75 -138.59 -126.30 REMARK 500 ALA C 124 -153.11 71.26 REMARK 500 THR C 132 51.68 -102.67 REMARK 500 LEU C 156 -66.30 -105.70 REMARK 500 GLU C 233 139.01 178.16 REMARK 500 ASP C 263 -63.24 -123.87 REMARK 500 LEU C 281 -79.75 74.05 REMARK 500 TRP C 381 -133.48 -83.39 REMARK 500 PHE D 75 -138.59 -126.98 REMARK 500 ALA D 124 -154.18 71.27 REMARK 500 LEU D 156 -66.24 -106.31 REMARK 500 GLU D 233 139.52 178.82 REMARK 500 ASP D 263 -63.26 -123.69 REMARK 500 LEU D 281 -80.11 74.61 REMARK 500 TRP D 381 -133.37 -84.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 MAN H 4 REMARK 615 MAN H 5 REMARK 615 MAN H 6 DBREF 5LVX A 1 497 UNP P04062 GLCM_HUMAN 20 516 DBREF 5LVX B 1 497 UNP P04062 GLCM_HUMAN 20 516 DBREF 5LVX C 1 497 UNP P04062 GLCM_HUMAN 20 516 DBREF 5LVX D 1 497 UNP P04062 GLCM_HUMAN 20 516 SEQRES 1 A 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 A 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 A 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 A 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 A 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 A 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 A 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 A 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 A 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 A 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 A 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 A 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 A 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 A 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 A 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 A 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 A 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 A 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 A 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 A 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 A 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 A 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 A 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 A 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 A 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 A 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 A 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 A 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 A 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 A 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 A 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 A 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 A 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 A 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 A 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 A 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 A 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 A 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 A 497 ARG ARG GLN SEQRES 1 B 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 B 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 B 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 B 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 B 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 B 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 B 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 B 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 B 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 B 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 B 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 B 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 B 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 B 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 B 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 B 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 B 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 B 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 B 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 B 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 B 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 B 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 B 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 B 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 B 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 B 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 B 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 B 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 B 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 B 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 B 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 B 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 B 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 B 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 B 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 B 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 B 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 B 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 B 497 ARG ARG GLN SEQRES 1 C 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 C 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 C 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 C 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 C 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 C 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 C 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 C 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 C 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 C 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 C 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 C 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 C 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 C 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 C 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 C 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 C 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 C 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 C 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 C 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 C 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 C 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 C 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 C 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 C 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 C 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 C 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 C 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 C 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 C 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 C 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 C 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 C 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 C 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 C 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 C 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 C 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 C 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 C 497 ARG ARG GLN SEQRES 1 D 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 D 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 D 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 D 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 D 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 D 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 D 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 D 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 D 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 D 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 D 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 D 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 D 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 D 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 D 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 D 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 D 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 D 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 D 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 D 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 D 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 D 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 D 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 D 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 D 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 D 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 D 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 D 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 D 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 D 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 D 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 D 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 D 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 D 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 D 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 D 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 D 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 D 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 D 497 ARG ARG GLN MODRES 5LVX NAG E 2 NAG -D MODRES 5LVX MAN E 4 MAN -D MODRES 5LVX MAN E 5 MAN -D MODRES 5LVX MAN E 6 MAN -D MODRES 5LVX NAG F 2 NAG -D MODRES 5LVX NAG G 2 NAG -D MODRES 5LVX MAN G 4 MAN -D MODRES 5LVX MAN G 5 MAN -D MODRES 5LVX NAG H 2 NAG -D MODRES 5LVX MAN H 4 MAN -D MODRES 5LVX MAN H 5 MAN -D MODRES 5LVX MAN H 6 MAN -D HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET MAN E 6 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET MAN G 5 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET MAN H 6 11 HET 79B A 507 38 HET PO4 A 508 5 HET PO4 A 509 5 HET PO4 A 510 5 HET PO4 A 511 5 HET PO4 A 512 5 HET PO4 A 513 5 HET NAG B 503 14 HET 7E4 B 504 38 HET PO4 B 505 5 HET PO4 B 506 5 HET PO4 B 507 5 HET PO4 B 508 5 HET PO4 B 509 5 HET 7E4 C 506 38 HET PO4 C 507 5 HET PO4 C 508 5 HET PO4 C 509 5 HET PO4 C 510 5 HET PO4 C 511 5 HET NAG D 507 14 HET 79B D 508 38 HET PO4 D 509 5 HET PO4 D 510 5 HET PO4 D 511 5 HET PO4 D 512 5 HET PO4 D 513 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM 79B 11-[(2~{R})-2-[(2-PYRIDIN-3-YLQUINAZOLIN-4-YL)AMINO]-2, HETNAM 2 79B 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC ACID HETNAM PO4 PHOSPHATE ION HETNAM 7E4 11-[(2~{S})-2-[(2-PYRIDIN-3-YLQUINAZOLIN-4-YL)AMINO]-2, HETNAM 2 7E4 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 10(C8 H15 N O6) FORMUL 5 BMA 3(C6 H12 O6) FORMUL 5 MAN 8(C6 H12 O6) FORMUL 9 79B 2(C33 H34 N4 O2) FORMUL 10 PO4 21(O4 P 3-) FORMUL 17 7E4 2(C33 H34 N4 O2) FORMUL 36 HOH *681(H2 O) HELIX 1 AA1 THR A 86 ALA A 95 1 10 HELIX 2 AA2 SER A 97 SER A 110 1 14 HELIX 3 AA3 PRO A 150 LYS A 155 1 6 HELIX 4 AA4 LEU A 156 ALA A 168 1 13 HELIX 5 AA5 PRO A 182 LYS A 186 5 5 HELIX 6 AA6 ASP A 203 HIS A 223 1 21 HELIX 7 AA7 SER A 237 LEU A 241 5 5 HELIX 8 AA8 THR A 252 ASP A 263 1 12 HELIX 9 AA9 ASP A 263 ASN A 270 1 8 HELIX 10 AB1 LEU A 286 LEU A 288 5 3 HELIX 11 AB2 PRO A 289 THR A 297 1 9 HELIX 12 AB3 ASP A 298 LYS A 303 1 6 HELIX 13 AB4 LEU A 314 ALA A 318 5 5 HELIX 14 AB5 PRO A 319 PHE A 331 1 13 HELIX 15 AB6 SER A 356 TYR A 373 1 18 HELIX 16 AB7 ILE A 406 ASP A 409 5 4 HELIX 17 AB8 GLN A 414 LYS A 425 1 12 HELIX 18 AB9 THR B 86 ALA B 95 1 10 HELIX 19 AC1 SER B 97 SER B 110 1 14 HELIX 20 AC2 PRO B 150 LYS B 155 1 6 HELIX 21 AC3 LEU B 156 ALA B 168 1 13 HELIX 22 AC4 PRO B 182 LYS B 186 5 5 HELIX 23 AC5 ASP B 203 HIS B 223 1 21 HELIX 24 AC6 SER B 237 LEU B 241 5 5 HELIX 25 AC7 THR B 252 ASP B 263 1 12 HELIX 26 AC8 ASP B 263 ASN B 270 1 8 HELIX 27 AC9 LEU B 286 LEU B 288 5 3 HELIX 28 AD1 PRO B 289 THR B 297 1 9 HELIX 29 AD2 ASP B 298 LYS B 303 1 6 HELIX 30 AD3 LEU B 314 ALA B 318 5 5 HELIX 31 AD4 PRO B 319 PHE B 331 1 13 HELIX 32 AD5 SER B 356 LEU B 372 1 17 HELIX 33 AD6 ILE B 406 ASP B 409 5 4 HELIX 34 AD7 GLN B 414 LYS B 425 1 12 HELIX 35 AD8 THR C 86 ALA C 95 1 10 HELIX 36 AD9 SER C 97 SER C 110 1 14 HELIX 37 AE1 PRO C 150 LYS C 155 1 6 HELIX 38 AE2 LEU C 156 ALA C 168 1 13 HELIX 39 AE3 PRO C 182 LYS C 186 5 5 HELIX 40 AE4 ASP C 203 HIS C 223 1 21 HELIX 41 AE5 SER C 237 LEU C 241 5 5 HELIX 42 AE6 THR C 252 ASP C 263 1 12 HELIX 43 AE7 ASP C 263 ASN C 270 1 8 HELIX 44 AE8 LEU C 286 LEU C 288 5 3 HELIX 45 AE9 PRO C 289 THR C 297 1 9 HELIX 46 AF1 ASP C 298 LYS C 303 1 6 HELIX 47 AF2 LEU C 314 ALA C 318 5 5 HELIX 48 AF3 PRO C 319 PHE C 331 1 13 HELIX 49 AF4 SER C 356 TYR C 373 1 18 HELIX 50 AF5 ILE C 406 ASP C 409 5 4 HELIX 51 AF6 GLN C 414 LYS C 425 1 12 HELIX 52 AF7 THR D 86 ALA D 95 1 10 HELIX 53 AF8 SER D 97 SER D 110 1 14 HELIX 54 AF9 PRO D 150 LYS D 155 1 6 HELIX 55 AG1 LEU D 156 ALA D 168 1 13 HELIX 56 AG2 PRO D 182 LYS D 186 5 5 HELIX 57 AG3 ASP D 203 HIS D 223 1 21 HELIX 58 AG4 SER D 237 LEU D 241 5 5 HELIX 59 AG5 THR D 252 ASP D 263 1 12 HELIX 60 AG6 ASP D 263 ASN D 270 1 8 HELIX 61 AG7 LEU D 286 LEU D 288 5 3 HELIX 62 AG8 PRO D 289 THR D 297 1 9 HELIX 63 AG9 ASP D 298 LYS D 303 1 6 HELIX 64 AH1 LEU D 314 ALA D 318 5 5 HELIX 65 AH2 PRO D 319 PHE D 331 1 13 HELIX 66 AH3 SER D 356 TYR D 373 1 18 HELIX 67 AH4 ILE D 406 ASP D 409 5 4 HELIX 68 AH5 GLN D 414 LYS D 425 1 12 SHEET 1 AA1 4 PRO A 6 LYS A 7 0 SHEET 2 AA1 4 VAL A 15 CYS A 18 -1 O VAL A 15 N LYS A 7 SHEET 3 AA1 4 THR A 410 LYS A 413 -1 O PHE A 411 N CYS A 18 SHEET 4 AA1 4 ILE A 402 ASP A 405 -1 N ASP A 405 O THR A 410 SHEET 1 AA2 9 GLU A 50 PRO A 55 0 SHEET 2 AA2 9 THR A 36 THR A 43 -1 N GLU A 41 O GLU A 50 SHEET 3 AA2 9 SER A 488 TRP A 494 -1 O LEU A 493 N SER A 38 SHEET 4 AA2 9 ALA A 456 ASN A 462 -1 N VAL A 458 O TYR A 492 SHEET 5 AA2 9 LEU A 444 MET A 450 -1 N ASP A 445 O LEU A 461 SHEET 6 AA2 9 GLN A 432 ALA A 438 -1 N GLN A 432 O MET A 450 SHEET 7 AA2 9 LEU A 65 LYS A 77 -1 N THR A 68 O VAL A 437 SHEET 8 AA2 9 VAL A 468 ASP A 474 1 O THR A 471 N LEU A 67 SHEET 9 AA2 9 GLY A 478 SER A 484 -1 O GLY A 478 N ASP A 474 SHEET 1 AA3 9 GLY A 80 ALA A 84 0 SHEET 2 AA3 9 ILE A 118 MET A 123 1 O ARG A 120 N GLY A 83 SHEET 3 AA3 9 SER A 173 PRO A 178 1 O LEU A 175 N VAL A 121 SHEET 4 AA3 9 ALA A 229 THR A 231 1 O THR A 231 N ALA A 176 SHEET 5 AA3 9 ARG A 277 GLN A 284 1 O LEU A 279 N VAL A 230 SHEET 6 AA3 9 GLY A 307 HIS A 311 1 O ALA A 309 N MET A 280 SHEET 7 AA3 9 MET A 335 GLU A 340 1 O MET A 335 N ILE A 308 SHEET 8 AA3 9 VAL A 375 ASN A 382 1 O VAL A 376 N LEU A 336 SHEET 9 AA3 9 GLY A 80 ALA A 84 1 N GLY A 82 O ASP A 380 SHEET 1 AA4 4 PRO B 6 LYS B 7 0 SHEET 2 AA4 4 VAL B 15 CYS B 18 -1 O VAL B 15 N LYS B 7 SHEET 3 AA4 4 THR B 410 LYS B 413 -1 O PHE B 411 N CYS B 18 SHEET 4 AA4 4 ILE B 402 ASP B 405 -1 N ASP B 405 O THR B 410 SHEET 1 AA5 9 GLU B 50 PRO B 55 0 SHEET 2 AA5 9 THR B 36 THR B 43 -1 N ARG B 39 O SER B 52 SHEET 3 AA5 9 SER B 488 TRP B 494 -1 O LEU B 493 N SER B 38 SHEET 4 AA5 9 ALA B 456 ASN B 462 -1 N VAL B 458 O TYR B 492 SHEET 5 AA5 9 LEU B 444 MET B 450 -1 N ASP B 445 O LEU B 461 SHEET 6 AA5 9 GLN B 432 ALA B 438 -1 N GLN B 432 O MET B 450 SHEET 7 AA5 9 LEU B 65 LYS B 77 -1 N THR B 68 O VAL B 437 SHEET 8 AA5 9 VAL B 468 ASP B 474 1 O THR B 471 N LEU B 67 SHEET 9 AA5 9 GLY B 478 SER B 484 -1 O GLY B 478 N ASP B 474 SHEET 1 AA6 9 GLY B 80 ALA B 84 0 SHEET 2 AA6 9 ILE B 118 MET B 123 1 O ARG B 120 N GLY B 83 SHEET 3 AA6 9 SER B 173 PRO B 178 1 O LEU B 175 N VAL B 121 SHEET 4 AA6 9 ALA B 229 THR B 231 1 O THR B 231 N ALA B 176 SHEET 5 AA6 9 ARG B 277 GLN B 284 1 O LEU B 279 N VAL B 230 SHEET 6 AA6 9 GLY B 307 HIS B 311 1 O ALA B 309 N MET B 280 SHEET 7 AA6 9 MET B 335 GLU B 340 1 O MET B 335 N ILE B 308 SHEET 8 AA6 9 VAL B 375 ASN B 382 1 O VAL B 376 N LEU B 336 SHEET 9 AA6 9 GLY B 80 ALA B 84 1 N GLY B 82 O ASP B 380 SHEET 1 AA7 4 PRO C 6 LYS C 7 0 SHEET 2 AA7 4 VAL C 15 CYS C 18 -1 O VAL C 15 N LYS C 7 SHEET 3 AA7 4 THR C 410 LYS C 413 -1 O PHE C 411 N CYS C 18 SHEET 4 AA7 4 ILE C 402 ASP C 405 -1 N ASP C 405 O THR C 410 SHEET 1 AA8 9 GLU C 50 PRO C 55 0 SHEET 2 AA8 9 THR C 36 THR C 43 -1 N ARG C 39 O SER C 52 SHEET 3 AA8 9 SER C 488 TRP C 494 -1 O LEU C 493 N SER C 38 SHEET 4 AA8 9 ALA C 456 ASN C 462 -1 N VAL C 458 O TYR C 492 SHEET 5 AA8 9 LEU C 444 MET C 450 -1 N ASP C 445 O LEU C 461 SHEET 6 AA8 9 GLN C 432 ALA C 438 -1 N GLN C 432 O MET C 450 SHEET 7 AA8 9 LEU C 65 LYS C 77 -1 N THR C 68 O VAL C 437 SHEET 8 AA8 9 VAL C 468 ASP C 474 1 O THR C 471 N LEU C 67 SHEET 9 AA8 9 GLY C 478 SER C 484 -1 O GLY C 478 N ASP C 474 SHEET 1 AA9 9 GLY C 80 ALA C 84 0 SHEET 2 AA9 9 ILE C 118 MET C 123 1 O ARG C 120 N GLY C 83 SHEET 3 AA9 9 SER C 173 PRO C 178 1 O LEU C 175 N VAL C 121 SHEET 4 AA9 9 ALA C 229 THR C 231 1 O THR C 231 N ALA C 176 SHEET 5 AA9 9 ARG C 277 GLN C 284 1 O LEU C 279 N VAL C 230 SHEET 6 AA9 9 GLY C 307 HIS C 311 1 O ALA C 309 N MET C 280 SHEET 7 AA9 9 MET C 335 GLU C 340 1 O MET C 335 N ILE C 308 SHEET 8 AA9 9 VAL C 375 ASN C 382 1 O VAL C 376 N LEU C 336 SHEET 9 AA9 9 GLY C 80 ALA C 84 1 N GLY C 82 O ASP C 380 SHEET 1 AB1 4 PRO D 6 LYS D 7 0 SHEET 2 AB1 4 VAL D 15 CYS D 18 -1 O VAL D 15 N LYS D 7 SHEET 3 AB1 4 THR D 410 LYS D 413 -1 O PHE D 411 N CYS D 18 SHEET 4 AB1 4 ILE D 402 ASP D 405 -1 N ASP D 405 O THR D 410 SHEET 1 AB2 9 GLU D 50 PRO D 55 0 SHEET 2 AB2 9 THR D 36 THR D 43 -1 N ARG D 39 O SER D 52 SHEET 3 AB2 9 SER D 488 TRP D 494 -1 O LEU D 493 N SER D 38 SHEET 4 AB2 9 ALA D 456 ASN D 462 -1 N VAL D 458 O TYR D 492 SHEET 5 AB2 9 LEU D 444 MET D 450 -1 N ASP D 445 O LEU D 461 SHEET 6 AB2 9 GLN D 432 ALA D 438 -1 N GLN D 432 O MET D 450 SHEET 7 AB2 9 LEU D 65 LYS D 77 -1 N THR D 68 O VAL D 437 SHEET 8 AB2 9 VAL D 468 ASP D 474 1 O THR D 471 N LEU D 67 SHEET 9 AB2 9 GLY D 478 SER D 484 -1 O GLY D 478 N ASP D 474 SHEET 1 AB3 9 GLY D 80 ALA D 84 0 SHEET 2 AB3 9 ILE D 118 MET D 123 1 O ARG D 120 N GLY D 83 SHEET 3 AB3 9 SER D 173 PRO D 178 1 O LEU D 175 N VAL D 121 SHEET 4 AB3 9 ALA D 229 THR D 231 1 O THR D 231 N ALA D 176 SHEET 5 AB3 9 ARG D 277 GLN D 284 1 O LEU D 279 N VAL D 230 SHEET 6 AB3 9 GLY D 307 HIS D 311 1 O ALA D 309 N MET D 280 SHEET 7 AB3 9 MET D 335 GLU D 340 1 O MET D 335 N ILE D 308 SHEET 8 AB3 9 VAL D 375 ASN D 382 1 O VAL D 376 N LEU D 336 SHEET 9 AB3 9 GLY D 80 ALA D 84 1 N GLY D 82 O ASP D 380 SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.10 SSBOND 2 CYS A 18 CYS A 23 1555 1555 2.11 SSBOND 3 CYS B 4 CYS B 16 1555 1555 2.06 SSBOND 4 CYS B 18 CYS B 23 1555 1555 2.12 SSBOND 5 CYS C 4 CYS C 16 1555 1555 2.08 SSBOND 6 CYS C 18 CYS C 23 1555 1555 2.13 SSBOND 7 CYS D 4 CYS D 16 1555 1555 2.08 SSBOND 8 CYS D 18 CYS D 23 1555 1555 2.11 LINK ND2 ASN A 19 C1 NAG E 1 1555 1555 1.44 LINK NZ LYS A 346 C2 79B A 507 1555 1555 1.34 LINK ND2 ASN B 19 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN B 146 C1 NAG B 503 1555 1555 1.46 LINK NZ LYS B 346 C2 7E4 B 504 1555 1555 1.34 LINK ND2 ASN C 19 C1 NAG G 1 1555 1555 1.46 LINK NZ LYS C 346 C2 7E4 C 506 1555 1555 1.33 LINK ND2 ASN D 19 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN D 146 C1 NAG D 507 1555 1555 1.47 LINK NZ LYS D 346 C2 79B D 508 1555 1555 1.35 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.46 LINK O2 MAN E 4 C1 MAN E 5 1555 1555 1.44 LINK O2 MAN E 5 C1 MAN E 6 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.43 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.44 LINK O6 BMA G 3 C1 MAN G 5 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.44 LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.45 LINK O2 MAN H 4 C1 MAN H 5 1555 1555 1.45 LINK O2 MAN H 5 C1 MAN H 6 1555 1555 1.44 CISPEP 1 LEU A 288 PRO A 289 0 2.72 CISPEP 2 GLY A 390 PRO A 391 0 5.12 CISPEP 3 LEU B 288 PRO B 289 0 -0.22 CISPEP 4 GLY B 390 PRO B 391 0 3.96 CISPEP 5 LEU C 288 PRO C 289 0 0.68 CISPEP 6 GLY C 390 PRO C 391 0 4.20 CISPEP 7 LEU D 288 PRO D 289 0 2.34 CISPEP 8 GLY D 390 PRO D 391 0 4.09 CRYST1 94.910 132.281 103.085 90.00 95.26 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010536 0.000000 0.000969 0.00000 SCALE2 0.000000 0.007560 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009742 0.00000