HEADER RNA 17-SEP-16 5LWJ TITLE SOLUTION NMR STRUCTURE OF THE GTP BINDING CLASS II RNA APTAMER-LIGAND- TITLE 2 COMPLEX CONTAINING A PROTONATED ADENINE NUCLEOTIDE WITH A HIGHLY TITLE 3 SHIFTED PKA. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP CLASS II RNA (34-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: AP7 N1-PROTONATED ADENINE SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 OTHER_DETAILS: SELEX KEYWDS RNA STRUCTURE, APTAMER, PROTONATED ADENINE, GTP, RNA EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR A.C.WOLTER,A.K.WEICKHMANN,A.H.NASIRI,K.HANTKE,O.OHLENSCHLAEGER, AUTHOR 2 C.H.WUNDERLICH,C.KREUTZ,E.DUCHARDT-FERNER,J.WOEHNERT REVDAT 4 18-SEP-19 5LWJ 1 REMARK REVDAT 3 08-MAY-19 5LWJ 1 REMARK REVDAT 2 11-JAN-17 5LWJ 1 JRNL REVDAT 1 14-DEC-16 5LWJ 0 JRNL AUTH A.C.WOLTER,A.K.WEICKHMANN,A.H.NASIRI,K.HANTKE, JRNL AUTH 2 O.OHLENSCHLAGER,C.H.WUNDERLICH,C.KREUTZ,E.DUCHARDT-FERNER, JRNL AUTH 3 J.WOHNERT JRNL TITL A STABLY PROTONATED ADENINE NUCLEOTIDE WITH A HIGHLY SHIFTED JRNL TITL 2 PKA VALUE STABILIZES THE TERTIARY STRUCTURE OF A GTP-BINDING JRNL TITL 3 RNA APTAMER. JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 56 401 2017 JRNL REFN ESSN 1521-3773 JRNL PMID 27885761 JRNL DOI 10.1002/ANIE.201609184 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPAL REMARK 3 AUTHORS : LUGINBUHL, GUNTERT, BILLETER, WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LWJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001413. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293; 283 REMARK 210 PH : 6.3; 6.3 REMARK 210 IONIC STRENGTH : POTASSIUM CHLORIDE (25); REMARK 210 POTASSIUM CHLORIDE (25) REMARK 210 PRESSURE : 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 0.66 MM GTP CLASS II RNA (34 REMARK 210 -MER), 1.32 MM [U-99% 13C; U-99% REMARK 210 15N] GTP, 2 MM MAGNESIUM ACETATE, REMARK 210 25 MM POTASSIUM PHOSPHATE, 25 REMARK 210 MM POTASSIUM CHLORIDE, 95 % H2O, REMARK 210 5 % D2O, 95% H2O/5% D2O; 0.66 MM REMARK 210 GTP CLASS II RNA (34-MER), 1.32 REMARK 210 MM [U-99% 13C; U-99% 15N] GTP, 2 REMARK 210 MM MAGNESIUM ACETATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 100 % D2O, REMARK 210 100% D2O; 0.9 MM GTP CLASS II REMARK 210 RNA (34-MER), 1.8 MM [U-99% 13C; REMARK 210 U-99% 15N] GTP, 2 MM MAGNESIUM REMARK 210 ACETATE, 25 MM POTASSIUM REMARK 210 PHOSPHATE, 25 MM POTASSIUM REMARK 210 CHLORIDE, 95 % H2O, 5 % D2O, 95% REMARK 210 H2O/5% D2O; 0.5 MM [U-99% 15N] REMARK 210 GTP CLASS II RNA (34-MER), 1 MM REMARK 210 [U-99% 13C; U-99% 15N] GTP, 2 MM REMARK 210 MAGNESIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 95 % H2O, 5 % REMARK 210 D2O, 95% H2O/5% D2O; 0.36 MM [U- REMARK 210 99% 13C; U-99% 15N] GTP CLASS II REMARK 210 RNA (34-MER), 0.72 MM GTP, 2 MM REMARK 210 MAGNESIUM ACETATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 90 % H2O, 10 REMARK 210 % D2O, 90% H2O/10% D2O; 1.2 MM REMARK 210 [U-99% 13C; U-99% 15N] GTP CLASS REMARK 210 II RNA (34-MER), 2.4 MM GTP, 2 REMARK 210 MM MAGNESIUM ACETATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 100 % D2O, REMARK 210 100% D2O; 1.1 MM [U-13C; U-15N]- REMARK 210 ADE GTP CLASS II RNA (34-MER), REMARK 210 2.2 MM [U-99% 13C; U-99% 15N] REMARK 210 GTP, 2 MM MAGNESIUM ACETATE, 25 REMARK 210 MM POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 95 % H2O, 5 % REMARK 210 D2O, 95% H2O/5% D2O; 1.1 MM [U- REMARK 210 13C; U-15N]-ADE GTP CLASS II RNA REMARK 210 (34-MER), 2.2 MM [U-99% 13C; U- REMARK 210 99% 15N] GTP, 2 MM MAGNESIUM REMARK 210 ACETATE, 25 MM POTASSIUM REMARK 210 PHOSPHATE, 25 MM POTASSIUM REMARK 210 CHLORIDE, 100 % D2O, 100% D2O; REMARK 210 0.73 MM [U-13C; U-15N]-CYT GTP REMARK 210 CLASS II RNA (34-MER), 1.46 MM REMARK 210 [U-99% 15N] GTP, 2 MM MAGNESIUM REMARK 210 ACETATE, 25 MM POTASSIUM REMARK 210 PHOSPHATE, 25 MM POTASSIUM REMARK 210 CHLORIDE, 95 % H2O, 5 % D2O, 95% REMARK 210 H2O/5% D2O; 0.73 MM [U-13C; U- REMARK 210 15N]-CYT GTP CLASS II RNA (34- REMARK 210 MER), 1.46 MM [U-99% 15N] GTP, 2 REMARK 210 MM MAGNESIUM ACETATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 100 % D2O, REMARK 210 100% D2O; 0.82 MM [U-13C; U-15N]- REMARK 210 GUA, [U-13C; U-15N]-URA GTP REMARK 210 CLASS II RNA (34-MER), 1.64 MM REMARK 210 [U-99% 15N] GTP, 2 MM MAGNESIUM REMARK 210 ACETATE, 25 MM POTASSIUM REMARK 210 PHOSPHATE, 25 MM POTASSIUM REMARK 210 CHLORIDE, 25 MM H2O, 100 % D2O, REMARK 210 95% H2O/5% D2O; 0.82 MM [U-13C; REMARK 210 U-15N]-GUA, [U-13C; U-15N]-URA REMARK 210 GTP CLASS II RNA (34-MER), 1.64 REMARK 210 MM [U-99% 15N] GTP, 2 MM REMARK 210 MAGNESIUM ACETATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 100 % D2O, REMARK 210 100% D2O; 1.3 MM [U-15N]-GUA, [U- REMARK 210 15N]-ADE GTP CLASS II RNA (34- REMARK 210 MER), 2.6 MM [U-99% 15N] GTP, 2 REMARK 210 MM MAGNESIUM ACETATE, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 POTASSIUM CHLORIDE, 95 % H2O, 5 % REMARK 210 D2O, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC3D 1H-13C NOESY REMARK 210 ALIPHATIC; 2D 1H-13C NOESY REMARK 210 AROMATIC; 2D 2D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D HCCH-TOCSY; 3D HCCH- REMARK 210 COSY; 2D 1H-15N HNN-COSY; 2D 1H- REMARK 210 13C HNCO; 2D 1H-13C H5(6)C5(6) REMARK 210 C4NH3; 2D 1H-13C H5(6)C5(6) REMARK 210 C4N4H4; 2D 1H-15N HCN AROMATIC; REMARK 210 2D 1H-15N HCN ALIPHATIC; D 1H- REMARK 210 15N 2BOND-HSQC; 2D 1H-1H HCCH- REMARK 210 TOCSY (ADENINE); 2D 1H-31P H(C)P; REMARK 210 2D HCCH-COSY; 2D 1H-13C LONG- REMARK 210 RANGEH8(C8)C5(N1)H1; 2D CMPG REMARK 210 NOESY; LR-2D-HNN-COSY; 2D-HNN- REMARK 210 COSY NH2; 3D 13C-F1 FILTERED, REMARK 210 13C-F3-EDITED NOESY HSQC; 2D 1H- REMARK 210 15N HSQC; 2D 1H-15N HSQC NH2 REMARK 210 ONLY; 2D 1H-13C HSQC AROMATIC; REMARK 210 2D 1H-13C HSQC ALIPHATIC; 2D 15N- REMARK 210 F2 EDITED 1H,1H NOESY; 3D HCCH- REMARK 210 TOCSY-CCH-E.COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 800 MHZ; 900 REMARK 210 MHZ; 950 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.5, CARA 1.8.4.2, CYANA REMARK 210 3.97 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 G A 1 O4' - C1' - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 1 G A 2 O4' - C1' - N9 ANGL. DEV. = 7.6 DEGREES REMARK 500 1 C A 3 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 1 C A 6 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 1 G A 9 O4' - C1' - N9 ANGL. DEV. = 6.4 DEGREES REMARK 500 1 A A 13 O4' - C1' - N9 ANGL. DEV. = 6.8 DEGREES REMARK 500 1 C A 15 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 G A 18 O4' - C1' - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 1 C A 23 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 1 G A 24 O4' - C1' - N9 ANGL. DEV. = 4.8 DEGREES REMARK 500 1 C A 25 O4' - C1' - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 1 A A 26 O4' - C1' - N9 ANGL. DEV. = 6.4 DEGREES REMARK 500 1 U A 31 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 1 C A 34 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 C A 6 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 2 C A 7 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 2 A A 13 O4' - C1' - N9 ANGL. DEV. = 5.9 DEGREES REMARK 500 2 G A 14 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 2 G A 14 N3 - C2 - N2 ANGL. DEV. = -4.3 DEGREES REMARK 500 2 C A 15 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 2 C A 17 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 G A 18 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 2 G A 18 N3 - C2 - N2 ANGL. DEV. = -4.5 DEGREES REMARK 500 2 A A 20 O4' - C1' - N9 ANGL. DEV. = 5.1 DEGREES REMARK 500 2 C A 23 O4' - C1' - N1 ANGL. DEV. = 5.9 DEGREES REMARK 500 2 A A 26 O4' - C1' - N9 ANGL. DEV. = 5.2 DEGREES REMARK 500 2 G A 29 O4' - C1' - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 2 U A 31 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 C A 34 O4' - C1' - N1 ANGL. DEV. = 6.7 DEGREES REMARK 500 3 C A 3 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 3 A A 4 O4' - C1' - N9 ANGL. DEV. = 5.4 DEGREES REMARK 500 3 G A 5 O4' - C1' - N9 ANGL. DEV. = 6.5 DEGREES REMARK 500 3 C A 6 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 3 C A 15 O4' - C1' - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 3 C A 17 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 3 G A 18 O4' - C1' - N9 ANGL. DEV. = 6.2 DEGREES REMARK 500 3 C A 23 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 3 C A 30 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 3 U A 31 O4' - C1' - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 3 C A 34 O4' - C1' - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 4 G A 2 O4' - C1' - N9 ANGL. DEV. = 4.3 DEGREES REMARK 500 4 G A 2 N3 - C2 - N2 ANGL. DEV. = -4.6 DEGREES REMARK 500 4 C A 3 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 4 C A 7 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 4 G A 9 O4' - C1' - N9 ANGL. DEV. = 6.8 DEGREES REMARK 500 4 C A 15 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 4 C A 17 O4' - C1' - N1 ANGL. DEV. = 5.6 DEGREES REMARK 500 4 A A 20 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 4 U A 21 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 4 C A 23 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 130 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 G A 2 0.09 SIDE CHAIN REMARK 500 1 C A 3 0.07 SIDE CHAIN REMARK 500 1 G A 9 0.12 SIDE CHAIN REMARK 500 1 G A 12 0.07 SIDE CHAIN REMARK 500 1 A A 16 0.10 SIDE CHAIN REMARK 500 1 A A 20 0.07 SIDE CHAIN REMARK 500 1 A A 27 0.06 SIDE CHAIN REMARK 500 2 G A 1 0.07 SIDE CHAIN REMARK 500 2 G A 2 0.10 SIDE CHAIN REMARK 500 2 C A 3 0.09 SIDE CHAIN REMARK 500 2 G A 9 0.08 SIDE CHAIN REMARK 500 2 G A 14 0.07 SIDE CHAIN REMARK 500 2 A A 16 0.11 SIDE CHAIN REMARK 500 2 C A 17 0.11 SIDE CHAIN REMARK 500 2 A A 20 0.10 SIDE CHAIN REMARK 500 2 C A 23 0.08 SIDE CHAIN REMARK 500 2 C A 34 0.07 SIDE CHAIN REMARK 500 3 G A 1 0.08 SIDE CHAIN REMARK 500 3 G A 2 0.08 SIDE CHAIN REMARK 500 3 C A 3 0.08 SIDE CHAIN REMARK 500 3 A A 13 0.09 SIDE CHAIN REMARK 500 3 A A 16 0.09 SIDE CHAIN REMARK 500 3 C A 17 0.09 SIDE CHAIN REMARK 500 3 U A 19 0.11 SIDE CHAIN REMARK 500 3 A A 20 0.10 SIDE CHAIN REMARK 500 3 C A 23 0.07 SIDE CHAIN REMARK 500 3 C A 25 0.07 SIDE CHAIN REMARK 500 3 G A 28 0.07 SIDE CHAIN REMARK 500 4 G A 2 0.08 SIDE CHAIN REMARK 500 4 C A 3 0.06 SIDE CHAIN REMARK 500 4 G A 9 0.09 SIDE CHAIN REMARK 500 4 G A 12 0.07 SIDE CHAIN REMARK 500 4 G A 14 0.08 SIDE CHAIN REMARK 500 4 A A 20 0.08 SIDE CHAIN REMARK 500 4 G A 24 0.06 SIDE CHAIN REMARK 500 4 A A 27 0.06 SIDE CHAIN REMARK 500 4 C A 30 0.12 SIDE CHAIN REMARK 500 4 G A 32 0.06 SIDE CHAIN REMARK 500 5 G A 1 0.10 SIDE CHAIN REMARK 500 5 G A 2 0.07 SIDE CHAIN REMARK 500 5 C A 3 0.07 SIDE CHAIN REMARK 500 5 G A 9 0.10 SIDE CHAIN REMARK 500 5 A A 10 0.07 SIDE CHAIN REMARK 500 5 G A 12 0.06 SIDE CHAIN REMARK 500 5 A A 16 0.08 SIDE CHAIN REMARK 500 5 C A 17 0.07 SIDE CHAIN REMARK 500 5 A A 20 0.08 SIDE CHAIN REMARK 500 5 A A 27 0.11 SIDE CHAIN REMARK 500 5 C A 30 0.07 SIDE CHAIN REMARK 500 6 G A 2 0.18 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 96 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25661 RELATED DB: BMRB DBREF 5LWJ A 1 34 PDB 5LWJ 5LWJ 1 34 SEQRES 1 A 34 G G C A G C C A G A AP7 G A SEQRES 2 A 34 G C A C G U A U A C G C A SEQRES 3 A 34 A G G C U G U C HET AP7 A 11 34 HET GTP A 101 44 HETNAM AP7 N1-PROTONATED ADENOSINE-5'-MONOPHOSPHATE HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 1 AP7 C10 H15 N5 O7 P 1+ FORMUL 2 GTP C10 H16 N5 O14 P3 LINK O3' A A 10 P AP7 A 11 1555 1555 1.63 LINK O3' AP7 A 11 P G A 12 1555 1555 1.62 SITE 1 AC1 6 G A 12 A A 16 C A 17 G A 18 SITE 2 AC1 6 A A 20 A A 22 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1