HEADER MEMBRANE PROTEIN 19-SEP-16 5LWY TITLE REVISED CRYSTAL STRUCTURE OF THE HUMAN ADIPONECTIN RECEPTOR 2 IN TITLE 2 COMPLEX WITH A C18 FREE FATTY ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADIPONECTIN RECEPTOR PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROGESTIN AND ADIPOQ RECEPTOR FAMILY MEMBER 2,PROGESTIN AND COMPND 5 ADIPOQ RECEPTOR FAMILY MEMBER II; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: V REGION HEAVY CHAIN; COMPND 9 CHAIN: H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: V REGION LIGHT CHAIN; COMPND 13 CHAIN: L; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADIPOR2, PAQR2; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: S2; SOURCE 14 OTHER_DETAILS: E.COLI CELL-FREE PROTEIN SYNTHESIS; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_TAXID: 10090; SOURCE 18 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: S2; SOURCE 21 OTHER_DETAILS: E.COLI CELL-FREE PROTEIN SYNTHESIS KEYWDS PROGESTIN AND ADIPOQ RECEPTOR FAMILY, INTEGRAL MEMBRANE PROTEIN, 7TM, KEYWDS 2 CERAMIDASE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LEYRAT,I.VASILIAUSKAITE-BROOKS,S.GRANIER REVDAT 9 23-OCT-24 5LWY 1 REMARK REVDAT 8 17-JAN-24 5LWY 1 REMARK REVDAT 7 16-OCT-19 5LWY 1 REMARK REVDAT 6 05-DEC-18 5LWY 1 COMPND SOURCE DBREF REVDAT 5 07-FEB-18 5LWY 1 REMARK REVDAT 4 19-APR-17 5LWY 1 AUTHOR ATOM REVDAT 3 12-APR-17 5LWY 1 JRNL REVDAT 2 05-APR-17 5LWY 1 JRNL REVDAT 1 22-MAR-17 5LWY 0 SPRSDE 22-MAR-17 5LWY 3WXW JRNL AUTH I.VASILIAUSKAITE-BROOKS,R.SOUNIER,P.ROCHAIX,G.BELLOT, JRNL AUTH 2 M.FORTIER,F.HOH,L.DE COLIBUS,C.BECHARA,E.M.SAIED,C.ARENZ, JRNL AUTH 3 C.LEYRAT,S.GRANIER JRNL TITL STRUCTURAL INSIGHTS INTO ADIPONECTIN RECEPTORS SUGGEST JRNL TITL 2 CERAMIDASE ACTIVITY. JRNL REF NATURE V. 6 120 2017 JRNL REFN ISSN 0028-0836 JRNL PMID 28329765 JRNL DOI 10.1038/NATURE21714 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 32174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1609 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 16 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.48 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.30 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2963 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2330 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2815 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.99 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 148 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 227 REMARK 3 SOLVENT ATOMS : 314 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.40840 REMARK 3 B22 (A**2) : 7.94770 REMARK 3 B33 (A**2) : -11.35610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.430 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.294 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.207 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.276 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.204 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4422 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5943 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1538 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 70 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 643 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4422 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 536 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4988 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.46 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 23.61 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 14.9251 -5.2766 -27.2531 REMARK 3 T TENSOR REMARK 3 T11: -0.4259 T22: -0.3997 REMARK 3 T33: 0.6753 T12: -0.0171 REMARK 3 T13: -0.0938 T23: 0.0707 REMARK 3 L TENSOR REMARK 3 L11: 3.1124 L22: 5.8060 REMARK 3 L33: 0.6134 L12: -1.9634 REMARK 3 L13: 0.3354 L23: -0.2826 REMARK 3 S TENSOR REMARK 3 S11: -0.1704 S12: 0.1168 S13: 0.8355 REMARK 3 S21: 0.0091 S22: -0.1180 S23: -0.6248 REMARK 3 S31: -0.2304 S32: -0.0213 S33: 0.2884 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 21.0213 0.5561 -23.8804 REMARK 3 T TENSOR REMARK 3 T11: -0.0456 T22: 0.2701 REMARK 3 T33: 0.1370 T12: -0.0432 REMARK 3 T13: -0.0352 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 3.8335 L22: 5.8014 REMARK 3 L33: 0.7630 L12: 1.5363 REMARK 3 L13: -2.1006 L23: 1.7055 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: -0.0219 S13: -0.0743 REMARK 3 S21: 0.0086 S22: 0.0111 S23: -0.0636 REMARK 3 S31: -0.2840 S32: -0.2394 S33: -0.0030 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { H|* } REMARK 3 ORIGIN FOR THE GROUP (A): 23.2636 -54.2900 -28.3298 REMARK 3 T TENSOR REMARK 3 T11: -0.5095 T22: -0.5133 REMARK 3 T33: 0.3861 T12: 0.0159 REMARK 3 T13: -0.0349 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 2.7481 L22: 5.3552 REMARK 3 L33: 1.4937 L12: -0.4249 REMARK 3 L13: 0.3827 L23: 0.0664 REMARK 3 S TENSOR REMARK 3 S11: 0.1127 S12: 0.2380 S13: -0.2158 REMARK 3 S21: -0.3631 S22: 0.0003 S23: 0.2663 REMARK 3 S31: 0.2379 S32: -0.0069 S33: -0.1130 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { L|* } REMARK 3 ORIGIN FOR THE GROUP (A): 29.3286 -43.0653 -10.3451 REMARK 3 T TENSOR REMARK 3 T11: -0.5652 T22: -0.5540 REMARK 3 T33: 0.3327 T12: -0.0098 REMARK 3 T13: -0.0083 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.0638 L22: 1.1441 REMARK 3 L33: 2.3670 L12: 0.0467 REMARK 3 L13: 1.1086 L23: -0.6745 REMARK 3 S TENSOR REMARK 3 S11: 0.0978 S12: -0.1441 S13: 0.2134 REMARK 3 S21: 0.1377 S22: 0.0029 S23: -0.0644 REMARK 3 S31: 0.1297 S32: -0.0188 S33: -0.1007 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LWY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001495. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32174 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 101.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3WXW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM NA-CITRATE, 400MM K-CITRATE, 30% REMARK 280 PEG400, PH 6.0, LIPIDIC MESOPHASE METHOD, TEMPERATURE 293K, REMARK 280 LIPIDIC CUBIC PHASE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 37.29000 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.31500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 37.29000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.31500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLU A 383 REMARK 465 ASP A 384 REMARK 465 ALA A 385 REMARK 465 LEU A 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 179 O HOH A 501 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 119 5.40 -68.98 REMARK 500 PRO A 130 44.95 -83.37 REMARK 500 ALA A 176 77.21 164.60 REMARK 500 HIS A 207 -74.54 -51.03 REMARK 500 ALA L 51 -44.73 69.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 626 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 627 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 628 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A 629 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH A 630 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A 631 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH A 632 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A 633 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH A 634 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH A 635 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH A 636 DISTANCE = 7.24 ANGSTROMS REMARK 525 HOH A 637 DISTANCE = 7.25 ANGSTROMS REMARK 525 HOH A 638 DISTANCE = 7.93 ANGSTROMS REMARK 525 HOH A 639 DISTANCE = 7.96 ANGSTROMS REMARK 525 HOH A 640 DISTANCE = 8.40 ANGSTROMS REMARK 525 HOH A 641 DISTANCE = 8.75 ANGSTROMS REMARK 525 HOH A 642 DISTANCE = 8.85 ANGSTROMS REMARK 525 HOH A 643 DISTANCE = 9.01 ANGSTROMS REMARK 525 HOH A 644 DISTANCE = 9.03 ANGSTROMS REMARK 525 HOH A 645 DISTANCE = 9.09 ANGSTROMS REMARK 525 HOH A 646 DISTANCE = 9.72 ANGSTROMS REMARK 525 HOH A 647 DISTANCE = 9.81 ANGSTROMS REMARK 525 HOH A 648 DISTANCE = 10.19 ANGSTROMS REMARK 525 HOH A 649 DISTANCE = 10.48 ANGSTROMS REMARK 525 HOH A 650 DISTANCE = 12.36 ANGSTROMS REMARK 525 HOH A 651 DISTANCE = 12.37 ANGSTROMS REMARK 525 HOH A 652 DISTANCE = 12.87 ANGSTROMS REMARK 525 HOH A 653 DISTANCE = 15.66 ANGSTROMS REMARK 525 HOH H 284 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH H 285 DISTANCE = 7.43 ANGSTROMS REMARK 525 HOH H 286 DISTANCE = 8.57 ANGSTROMS REMARK 525 HOH H 287 DISTANCE = 9.19 ANGSTROMS REMARK 525 HOH H 288 DISTANCE = 9.76 ANGSTROMS REMARK 525 HOH H 289 DISTANCE = 12.72 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 OLB A 405 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 202 NE2 REMARK 620 2 HIS A 348 NE2 83.2 REMARK 620 3 HIS A 352 NE2 98.6 95.9 REMARK 620 4 HOH A 503 O 101.1 77.0 158.0 REMARK 620 5 HOH A 537 O 160.6 83.8 97.0 61.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WXW RELATED DB: PDB REMARK 900 3WXW CONTAINS THE SAME PROTEIN WITHOUT LIGANDS (OLEATE AND REMARK 900 MONOOLEINS) DBREF 5LWY A 100 386 UNP Q86V24 PAQR2_HUMAN 100 386 DBREF 5LWY H 1 119 PDB 5LWY 5LWY 1 119 DBREF 5LWY L 1 107 PDB 5LWY 5LWY 1 107 SEQADV 5LWY GLY A -4 UNP Q86V24 EXPRESSION TAG SEQADV 5LWY GLY A -3 UNP Q86V24 EXPRESSION TAG SEQADV 5LWY SER A -2 UNP Q86V24 EXPRESSION TAG SEQADV 5LWY GLU A -1 UNP Q86V24 EXPRESSION TAG SEQADV 5LWY PHE A 0 UNP Q86V24 EXPRESSION TAG SEQRES 1 A 292 GLY GLY SER GLU PHE GLU GLY ARG TRP ARG VAL ILE PRO SEQRES 2 A 292 HIS ASP VAL LEU PRO ASP TRP LEU LYS ASP ASN ASP PHE SEQRES 3 A 292 LEU LEU HIS GLY HIS ARG PRO PRO MET PRO SER PHE ARG SEQRES 4 A 292 ALA CYS PHE LYS SER ILE PHE ARG ILE HIS THR GLU THR SEQRES 5 A 292 GLY ASN ILE TRP THR HIS LEU LEU GLY CYS VAL PHE PHE SEQRES 6 A 292 LEU CYS LEU GLY ILE PHE TYR MET PHE ARG PRO ASN ILE SEQRES 7 A 292 SER PHE VAL ALA PRO LEU GLN GLU LYS VAL VAL PHE GLY SEQRES 8 A 292 LEU PHE PHE LEU GLY ALA ILE LEU CYS LEU SER PHE SER SEQRES 9 A 292 TRP LEU PHE HIS THR VAL TYR CYS HIS SER GLU GLY VAL SEQRES 10 A 292 SER ARG LEU PHE SER LYS LEU ASP TYR SER GLY ILE ALA SEQRES 11 A 292 LEU LEU ILE MET GLY SER PHE VAL PRO TRP LEU TYR TYR SEQRES 12 A 292 SER PHE TYR CYS ASN PRO GLN PRO CYS PHE ILE TYR LEU SEQRES 13 A 292 ILE VAL ILE CYS VAL LEU GLY ILE ALA ALA ILE ILE VAL SEQRES 14 A 292 SER GLN TRP ASP MET PHE ALA THR PRO GLN TYR ARG GLY SEQRES 15 A 292 VAL ARG ALA GLY VAL PHE LEU GLY LEU GLY LEU SER GLY SEQRES 16 A 292 ILE ILE PRO THR LEU HIS TYR VAL ILE SER GLU GLY PHE SEQRES 17 A 292 LEU LYS ALA ALA THR ILE GLY GLN ILE GLY TRP LEU MET SEQRES 18 A 292 LEU MET ALA SER LEU TYR ILE THR GLY ALA ALA LEU TYR SEQRES 19 A 292 ALA ALA ARG ILE PRO GLU ARG PHE PHE PRO GLY LYS CYS SEQRES 20 A 292 ASP ILE TRP PHE HIS SER HIS GLN LEU PHE HIS ILE PHE SEQRES 21 A 292 VAL VAL ALA GLY ALA PHE VAL HIS PHE HIS GLY VAL SER SEQRES 22 A 292 ASN LEU GLN GLU PHE ARG PHE MET ILE GLY GLY GLY CYS SEQRES 23 A 292 SER GLU GLU ASP ALA LEU SEQRES 1 H 119 GLU VAL LEU LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 H 119 PRO GLY ALA SER VAL ARG ILE THR CYS LYS ALA SER GLY SEQRES 3 H 119 TYR THR PHE THR ASP PHE ASN MET ASP TRP VAL LYS GLN SEQRES 4 H 119 SER PRO GLY LYS SER LEU GLU TRP ILE GLY ASP PHE ASN SEQRES 5 H 119 PRO ASN SER GLY GLY SER ILE TYR ASN GLN LYS PHE LYS SEQRES 6 H 119 ASP LYS ALA THR PHE THR VAL ASP LYS SER SER SER THR SEQRES 7 H 119 ALA TYR MET GLU LEU ARG SER LEU THR PHE GLU ASP THR SEQRES 8 H 119 ALA VAL TYR TYR CYS ALA ARG GLU THR GLY THR ALA TRP SEQRES 9 H 119 PHE ALA TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 119 ALA ALA SEQRES 1 L 107 ASP ILE GLN MET THR GLN SER PRO ALA SER LEU SER ALA SEQRES 2 L 107 SER VAL GLY GLU THR VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 107 GLY ASN ILE HIS ASN PHE LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 107 GLN GLY LYS SER PRO GLN VAL LEU VAL TYR ASN ALA LYS SEQRES 5 L 107 THR LEU ALA ASP GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 107 GLY SER GLY THR GLN TYR SER LEU LYS ILE ASN SER LEU SEQRES 7 L 107 GLN PRO GLU ASP PHE GLY SER TYR TYR CYS GLN GLN PHE SEQRES 8 L 107 TRP SER THR PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 107 GLU ILE ASN HET ZN A 401 1 HET OLB A 402 25 HET OLB A 403 25 HET OLB A 404 25 HET OLB A 405 25 HET OLB A 406 25 HET OLB A 407 25 HET OLB A 408 25 HET OLB A 409 25 HET OLA A 410 20 HET GOL L 201 6 HETNAM ZN ZINC ION HETNAM OLB (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM OLA OLEIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 ZN ZN 2+ FORMUL 5 OLB 8(C21 H40 O4) FORMUL 13 OLA C18 H34 O2 FORMUL 14 GOL C3 H8 O3 FORMUL 15 HOH *314(H2 O) HELIX 1 AA1 PRO A 107 LEU A 111 5 5 HELIX 2 AA2 PRO A 112 LYS A 116 5 5 HELIX 3 AA3 SER A 131 SER A 138 1 8 HELIX 4 AA4 ILE A 139 ARG A 141 5 3 HELIX 5 AA5 GLU A 145 PHE A 168 1 24 HELIX 6 AA6 PRO A 170 PHE A 174 5 5 HELIX 7 AA7 ALA A 176 VAL A 204 1 29 HELIX 8 AA8 SER A 208 PHE A 239 1 32 HELIX 9 AA9 ASN A 242 SER A 264 1 23 HELIX 10 AB1 THR A 271 GLN A 273 5 3 HELIX 11 AB2 TYR A 274 SER A 288 1 15 HELIX 12 AB3 GLY A 289 GLY A 301 1 13 HELIX 13 AB4 GLY A 301 ILE A 308 1 8 HELIX 14 AB5 GLY A 309 ARG A 331 1 23 HELIX 15 AB6 HIS A 346 GLY A 377 1 32 HELIX 16 AB7 THR H 28 PHE H 32 5 5 HELIX 17 AB8 GLN H 62 LYS H 65 5 4 HELIX 18 AB9 THR H 87 THR H 91 5 5 HELIX 19 AC1 GLN L 79 PHE L 83 5 5 SHEET 1 AA1 4 LEU H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 AA1 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AA2 6 GLU H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA2 6 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 112 SHEET 4 AA2 6 MET H 34 GLN H 39 -1 N ASP H 35 O ALA H 97 SHEET 5 AA2 6 LEU H 45 PHE H 51 -1 O PHE H 51 N MET H 34 SHEET 6 AA2 6 SER H 58 TYR H 60 -1 O ILE H 59 N ASP H 50 SHEET 1 AA3 4 GLU H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA3 4 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 112 SHEET 4 AA3 4 TYR H 107 TRP H 108 -1 O TYR H 107 N ARG H 98 SHEET 1 AA4 4 MET L 4 SER L 7 0 SHEET 2 AA4 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA4 4 GLN L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA4 4 PHE L 62 SER L 67 -1 N SER L 63 O LYS L 74 SHEET 1 AA5 6 SER L 10 SER L 14 0 SHEET 2 AA5 6 THR L 102 ASN L 107 1 O LYS L 103 N LEU L 11 SHEET 3 AA5 6 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AA5 6 LEU L 33 GLN L 38 -1 N GLN L 38 O SER L 85 SHEET 5 AA5 6 GLN L 45 TYR L 49 -1 O VAL L 48 N TRP L 35 SHEET 6 AA5 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA6 4 SER L 10 SER L 14 0 SHEET 2 AA6 4 THR L 102 ASN L 107 1 O LYS L 103 N LEU L 11 SHEET 3 AA6 4 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AA6 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.93 LINK NE2 HIS A 202 ZN ZN A 401 1555 1555 2.54 LINK NE2 HIS A 348 ZN ZN A 401 1555 1555 2.32 LINK NE2 HIS A 352 ZN ZN A 401 1555 1555 1.92 LINK ZN ZN A 401 O HOH A 503 1555 1555 2.51 LINK ZN ZN A 401 O HOH A 537 1555 1555 2.64 CISPEP 1 ILE A 332 PRO A 333 0 8.79 CISPEP 2 SER L 7 PRO L 8 0 -3.59 CISPEP 3 THR L 94 PRO L 95 0 -2.84 SITE 1 AC1 5 HIS A 202 HIS A 348 HIS A 352 HOH A 503 SITE 2 AC1 5 HOH A 537 SITE 1 AC2 11 PHE A 132 ARG A 133 VAL A 297 GLY A 301 SITE 2 AC2 11 PHE A 302 LEU A 303 OLB A 404 HOH A 502 SITE 3 AC2 11 HOH A 511 ASN L 28 HIS L 30 SITE 1 AC3 3 PHE A 197 OLB A 404 OLB A 406 SITE 1 AC4 4 TRP A 199 OLB A 402 OLB A 403 OLB A 409 SITE 1 AC5 3 LYS A 217 LEU A 225 GLN A 265 SITE 1 AC6 1 OLB A 403 SITE 1 AC7 4 MET A 228 CYS A 254 ILE A 262 GLN A 265 SITE 1 AC8 7 ILE A 164 MET A 167 PHE A 168 GLY A 276 SITE 2 AC8 7 LEU A 283 LEU A 287 ILE A 322 SITE 1 AC9 9 GLY A 286 GLY A 289 ILE A 290 PHE A 302 SITE 2 AC9 9 ILE A 311 LEU A 314 MET A 317 HIS A 362 SITE 3 AC9 9 OLB A 404 SITE 1 AD1 17 TYR A 220 ILE A 223 ARG A 278 ALA A 279 SITE 2 AD1 17 PHE A 282 LEU A 283 MET A 317 LEU A 320 SITE 3 AD1 17 TYR A 321 ALA A 325 TYR A 328 PHE A 351 SITE 4 AD1 17 PHE A 354 VAL A 355 GLY A 358 HOH A 503 SITE 5 AD1 17 HOH A 537 SITE 1 AD2 3 GLN L 37 LEU L 47 GLY L 57 CRYST1 74.580 101.030 108.630 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013408 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009898 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009206 0.00000