HEADER TRANSCRIPTION 28-SEP-16 5LYQ TITLE CRYSTAL STRUCTURE OF THE RETINOIC ACID RECEPTOR ALPHA IN COMPLEX WITH TITLE 2 A SYNTHETIC SPIROKETAL AGONIST AND A FRAGMENT OF THE TIF2 CO- TITLE 3 ACTIVATOR. COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINOIC ACID RECEPTOR RXR-ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 223-462; COMPND 5 SYNONYM: NUCLEAR RECEPTOR SUBFAMILY 2 GROUP B MEMBER 1,RETINOID X COMPND 6 RECEPTOR ALPHA; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HIS-LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RXRA, NR2B1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, RXR, SPIROKETAL, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.A.ANDREI,C.OTTMANN REVDAT 5 17-JAN-24 5LYQ 1 REMARK REVDAT 4 10-AUG-22 5LYQ 1 REMARK REVDAT 3 13-SEP-17 5LYQ 1 REMARK REVDAT 2 10-MAY-17 5LYQ 1 JRNL REVDAT 1 26-APR-17 5LYQ 0 JRNL AUTH M.SCHEEPSTRA,S.A.ANDREI,M.Y.UNVER,A.K.H.HIRSCH,S.LEYSEN, JRNL AUTH 2 C.OTTMANN,L.BRUNSVELD,L.G.MILROY JRNL TITL DESIGNED SPIROKETAL PROTEIN MODULATION. JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 56 5480 2017 JRNL REFN ESSN 1521-3773 JRNL PMID 28407400 JRNL DOI 10.1002/ANIE.201612504 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 13159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.750 REMARK 3 FREE R VALUE TEST SET COUNT : 625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.5902 - 3.4442 0.99 3317 164 0.1703 0.2032 REMARK 3 2 3.4442 - 2.7339 1.00 3149 151 0.1991 0.2857 REMARK 3 3 2.7339 - 2.3884 1.00 3086 164 0.2387 0.2477 REMARK 3 4 2.3884 - 2.1700 0.97 2982 146 0.3731 0.3942 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1952 REMARK 3 ANGLE : 0.560 2663 REMARK 3 CHIRALITY : 0.037 295 REMARK 3 PLANARITY : 0.004 344 REMARK 3 DIHEDRAL : 15.527 1198 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5737 -19.8649 -23.1542 REMARK 3 T TENSOR REMARK 3 T11: 0.5566 T22: 0.1682 REMARK 3 T33: 0.2942 T12: 0.0310 REMARK 3 T13: 0.0703 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 5.7593 L22: 5.4843 REMARK 3 L33: 3.7792 L12: -2.8027 REMARK 3 L13: 0.8614 L23: -2.0689 REMARK 3 S TENSOR REMARK 3 S11: 0.2595 S12: 0.2079 S13: -0.5057 REMARK 3 S21: -0.1407 S22: -0.2428 S23: 0.2188 REMARK 3 S31: 0.6124 S32: -0.1676 S33: -0.1525 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 264 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3933 -11.4614 -20.0532 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: 0.1486 REMARK 3 T33: 0.2237 T12: -0.0284 REMARK 3 T13: 0.0429 T23: 0.0722 REMARK 3 L TENSOR REMARK 3 L11: 0.7534 L22: 1.8795 REMARK 3 L33: 1.0360 L12: 0.0643 REMARK 3 L13: -0.7844 L23: -0.7101 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: -0.1562 S13: -0.2710 REMARK 3 S21: 0.1922 S22: 0.1267 S23: 0.3082 REMARK 3 S31: 0.3233 S32: -0.2146 S33: -0.1205 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 294 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0845 -7.4614 -33.0548 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.1498 REMARK 3 T33: 0.2109 T12: -0.0167 REMARK 3 T13: 0.0199 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.0354 L22: 2.0278 REMARK 3 L33: 2.8076 L12: -0.3446 REMARK 3 L13: 0.3447 L23: -1.5710 REMARK 3 S TENSOR REMARK 3 S11: 0.0718 S12: 0.2431 S13: -0.1062 REMARK 3 S21: -0.1673 S22: 0.0072 S23: 0.1976 REMARK 3 S31: 0.4134 S32: -0.1110 S33: -0.0738 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 442 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7984 -5.8077 -24.8283 REMARK 3 T TENSOR REMARK 3 T11: 0.2703 T22: 0.1740 REMARK 3 T33: 0.2118 T12: 0.0251 REMARK 3 T13: 0.0106 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 2.5652 L22: 1.6037 REMARK 3 L33: 1.8096 L12: -0.6150 REMARK 3 L13: -0.7978 L23: 0.6426 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: 0.0499 S13: -0.0763 REMARK 3 S21: -0.0026 S22: -0.0728 S23: -0.1271 REMARK 3 S31: 0.3846 S32: 0.2986 S33: 0.0231 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 443 THROUGH 458 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8035 0.9140 -20.7586 REMARK 3 T TENSOR REMARK 3 T11: 0.3485 T22: 0.2791 REMARK 3 T33: 0.3980 T12: 0.0419 REMARK 3 T13: 0.1214 T23: 0.0478 REMARK 3 L TENSOR REMARK 3 L11: 7.1024 L22: 6.4085 REMARK 3 L33: 2.5601 L12: 0.8074 REMARK 3 L13: 3.1350 L23: -1.8301 REMARK 3 S TENSOR REMARK 3 S11: -0.2407 S12: -0.3000 S13: 0.4503 REMARK 3 S21: 0.5837 S22: 0.1575 S23: 0.7119 REMARK 3 S31: -0.6939 S32: -0.5302 S33: 0.1358 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 472 THROUGH 481 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6063 -8.4385 -9.1121 REMARK 3 T TENSOR REMARK 3 T11: 0.4730 T22: 0.3309 REMARK 3 T33: 0.3195 T12: -0.1362 REMARK 3 T13: 0.1950 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 3.5167 L22: 3.4942 REMARK 3 L33: 2.5536 L12: 2.6520 REMARK 3 L13: -1.6413 L23: -1.8739 REMARK 3 S TENSOR REMARK 3 S11: -0.0530 S12: -0.3483 S13: -0.0223 REMARK 3 S21: 0.4837 S22: 0.1344 S23: 0.5367 REMARK 3 S31: -0.3512 S32: 0.3318 S33: -0.5250 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001604. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-003 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13334 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 45.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.89200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4OC7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MIB BUFFER PH 8, 25% (W/V) PEG REMARK 280 1500, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.60350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.31600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.31600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.90525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.31600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.31600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.30175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.31600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.31600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 84.90525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.31600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.31600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.30175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.60350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -56.60350 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 670 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 223 REMARK 465 SER A 224 REMARK 465 SER A 225 REMARK 465 ALA A 226 REMARK 465 ASN A 227 REMARK 465 GLU A 228 REMARK 465 LYS A 245 REMARK 465 THR A 246 REMARK 465 GLU A 247 REMARK 465 THR A 248 REMARK 465 TYR A 249 REMARK 465 VAL A 250 REMARK 465 GLU A 251 REMARK 465 ALA A 252 REMARK 465 ASN A 253 REMARK 465 MET A 254 REMARK 465 GLY A 255 REMARK 465 LEU A 256 REMARK 465 ASN A 257 REMARK 465 PRO A 258 REMARK 465 SER A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 ASN A 262 REMARK 465 HIS A 459 REMARK 465 GLN A 460 REMARK 465 MET A 461 REMARK 465 THR A 462 REMARK 465 LYS B 471 REMARK 465 SER B 482 REMARK 465 SER B 483 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 288 -2.37 74.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7BE A 501 DBREF 5LYQ A 223 462 UNP P19793 RXRA_HUMAN 223 462 DBREF 5LYQ B 471 483 PDB 5LYQ 5LYQ 471 483 SEQRES 1 A 240 THR SER SER ALA ASN GLU ASP MET PRO VAL GLU ARG ILE SEQRES 2 A 240 LEU GLU ALA GLU LEU ALA VAL GLU PRO LYS THR GLU THR SEQRES 3 A 240 TYR VAL GLU ALA ASN MET GLY LEU ASN PRO SER SER PRO SEQRES 4 A 240 ASN ASP PRO VAL THR ASN ILE CYS GLN ALA ALA ASP LYS SEQRES 5 A 240 GLN LEU PHE THR LEU VAL GLU TRP ALA LYS ARG ILE PRO SEQRES 6 A 240 HIS PHE SER GLU LEU PRO LEU ASP ASP GLN VAL ILE LEU SEQRES 7 A 240 LEU ARG ALA GLY TRP ASN GLU LEU LEU ILE ALA SER PHE SEQRES 8 A 240 SER HIS ARG SER ILE ALA VAL LYS ASP GLY ILE LEU LEU SEQRES 9 A 240 ALA THR GLY LEU HIS VAL HIS ARG ASN SER ALA HIS SER SEQRES 10 A 240 ALA GLY VAL GLY ALA ILE PHE ASP ARG VAL LEU THR GLU SEQRES 11 A 240 LEU VAL SER LYS MET ARG ASP MET GLN MET ASP LYS THR SEQRES 12 A 240 GLU LEU GLY CYS LEU ARG ALA ILE VAL LEU PHE ASN PRO SEQRES 13 A 240 ASP SER LYS GLY LEU SER ASN PRO ALA GLU VAL GLU ALA SEQRES 14 A 240 LEU ARG GLU LYS VAL TYR ALA SER LEU GLU ALA TYR CYS SEQRES 15 A 240 LYS HIS LYS TYR PRO GLU GLN PRO GLY ARG PHE ALA LYS SEQRES 16 A 240 LEU LEU LEU ARG LEU PRO ALA LEU ARG SER ILE GLY LEU SEQRES 17 A 240 LYS CYS LEU GLU HIS LEU PHE PHE PHE LYS LEU ILE GLY SEQRES 18 A 240 ASP THR PRO ILE ASP THR PHE LEU MET GLU MET LEU GLU SEQRES 19 A 240 ALA PRO HIS GLN MET THR SEQRES 1 B 13 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER HET 7BE A 501 30 HETNAM 7BE (2~{R})-6,6,9,9-TETRAMETHYLSPIRO[3,4,7,8- HETNAM 2 7BE TETRAHYDROBENZO[G]CHROMENE-2,2'-3,4-DIHYDROCHROMENE]- HETNAM 3 7BE 6'-CARBOXYLIC ACID FORMUL 3 7BE C26 H30 O4 FORMUL 4 HOH *165(H2 O) HELIX 1 AA1 PRO A 231 VAL A 242 1 12 HELIX 2 AA2 PRO A 264 ILE A 286 1 23 HELIX 3 AA3 PRO A 293 SER A 317 1 25 HELIX 4 AA4 ARG A 334 SER A 339 1 6 HELIX 5 AA5 VAL A 342 LEU A 353 1 12 HELIX 6 AA6 LEU A 353 GLN A 361 1 9 HELIX 7 AA7 ASP A 363 PHE A 376 1 14 HELIX 8 AA8 ASN A 385 TYR A 408 1 24 HELIX 9 AA9 GLY A 413 LEU A 420 1 8 HELIX 10 AB1 ARG A 421 GLY A 443 1 23 HELIX 11 AB2 ASP A 448 GLU A 456 1 9 HELIX 12 AB3 LYS B 473 ASP B 481 1 9 SHEET 1 AA1 2 GLY A 323 LEU A 325 0 SHEET 2 AA1 2 HIS A 331 HIS A 333 -1 O VAL A 332 N ILE A 324 SITE 1 AC1 12 ILE A 268 ALA A 271 ALA A 272 ASN A 306 SITE 2 AC1 12 LEU A 309 ILE A 310 PHE A 313 ARG A 316 SITE 3 AC1 12 LEU A 326 ALA A 327 CYS A 432 HIS A 435 CRYST1 64.632 64.632 113.207 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015472 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015472 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008833 0.00000