HEADER OXIDOREDUCTASE 05-OCT-16 5M0P TITLE CRYSTAL STRUCTURE OF CYTOCHROME P450 OLET F79A IN COMPLEX WITH TITLE 2 ARACHIDONIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: TERMINAL OLEFIN-FORMING FATTY ACID DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: JEOTGALICOCCUS SP. ATCC 8456; SOURCE 3 ORGANISM_TAXID: 946435; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOCHROME P450, DECARBOXYLASE, OXIDASE, PEROXIDE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.L.TEE,A.MUNRO,S.MATTHEWS,D.LEYS,C.LEVY REVDAT 2 06-DEC-17 5M0P 1 JRNL REVDAT 1 11-JAN-17 5M0P 0 JRNL AUTH S.MATTHEWS,J.D.BELCHER,K.L.TEE,H.M.GIRVAN,K.J.MCLEAN, JRNL AUTH 2 S.E.RIGBY,C.W.LEVY,D.LEYS,D.A.PARKER,R.T.BLANKLEY,A.W.MUNRO JRNL TITL CATALYTIC DETERMINANTS OF ALKENE PRODUCTION BY THE JRNL TITL 2 CYTOCHROME P450 PEROXYGENASE OLETJE. JRNL REF J. BIOL. CHEM. V. 292 5128 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28053093 JRNL DOI 10.1074/JBC.M116.762336 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 66360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3443 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4861 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 257 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6792 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 131 REMARK 3 SOLVENT ATOMS : 701 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.48000 REMARK 3 B22 (A**2) : -1.97000 REMARK 3 B33 (A**2) : -1.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.406 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7182 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6787 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9753 ; 1.270 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15596 ; 1.150 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 861 ; 5.377 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 349 ;32.872 ;23.668 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1218 ;14.449 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 58 ;14.870 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1025 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8179 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1717 ; 0.011 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 13967 ; 5.894 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 261 ;11.690 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 14228 ; 4.995 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5M0P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200001692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66360 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 55.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.84200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M HEPES, 20% PEG REMARK 280 6000, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.94000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.42500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.42500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.94000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -1 N CB CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 LYS B 181 CG CD CE NZ REMARK 470 GLU B 269 CD OE1 OE2 REMARK 470 GLU B 396 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 790 O HOH A 881 1.96 REMARK 500 O HOH B 878 O HOH B 895 1.99 REMARK 500 OE1 GLN A 200 O HOH A 601 2.00 REMARK 500 O HOH A 881 O HOH A 945 2.00 REMARK 500 O HOH A 801 O HOH A 867 2.04 REMARK 500 O HOH B 875 O HOH B 876 2.06 REMARK 500 O HOH A 902 O HOH A 903 2.06 REMARK 500 O ALA B 2 O HOH B 601 2.09 REMARK 500 O HOH B 664 O HOH B 904 2.09 REMARK 500 O HOH A 796 O HOH A 818 2.10 REMARK 500 OE1 GLU A 335 O HOH A 602 2.10 REMARK 500 O HOH A 867 O HOH A 947 2.11 REMARK 500 O HOH B 718 O HOH B 878 2.11 REMARK 500 O HOH A 873 O HOH A 929 2.14 REMARK 500 O HOH A 872 O HOH A 878 2.14 REMARK 500 O HOH A 871 O HOH A 904 2.16 REMARK 500 O HOH A 601 O HOH A 776 2.18 REMARK 500 O HOH A 834 O HOH A 875 2.18 REMARK 500 O HOH A 655 O HOH A 678 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 153 O HOH B 850 3455 1.68 REMARK 500 O HOH A 930 O HOH B 801 1655 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 103 51.80 -92.35 REMARK 500 PHE A 244 -17.77 -142.55 REMARK 500 PHE A 291 -77.95 -142.16 REMARK 500 SER A 328 -18.07 119.75 REMARK 500 PHE A 410 101.29 66.54 REMARK 500 MET B 103 52.65 -91.78 REMARK 500 PHE B 244 -15.73 -142.76 REMARK 500 PHE B 291 -78.50 -139.17 REMARK 500 PHE B 410 101.85 66.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 949 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH B 951 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 952 DISTANCE = 7.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 365 SG REMARK 620 2 HEM A 501 NA 101.0 REMARK 620 3 HEM A 501 NB 88.9 90.4 REMARK 620 4 HEM A 501 NC 81.8 177.2 89.1 REMARK 620 5 HEM A 501 ND 93.5 89.6 177.5 90.8 REMARK 620 6 HOH A 795 O 168.9 90.1 90.3 87.1 87.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 365 SG REMARK 620 2 HEM B 501 NA 97.8 REMARK 620 3 HEM B 501 NB 89.0 88.4 REMARK 620 4 HEM B 501 NC 85.7 176.5 91.3 REMARK 620 5 HEM B 501 ND 93.7 91.5 177.3 88.6 REMARK 620 6 HOH B 855 O 175.2 86.7 89.3 89.9 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 389 OD1 REMARK 620 2 HOH B 843 O 97.9 REMARK 620 3 HOH B 737 O 94.3 101.7 REMARK 620 4 ASP B 332 OD2 94.4 138.9 38.1 REMARK 620 5 HOH B 619 O 87.4 170.2 86.0 48.1 REMARK 620 6 HOH B 623 O 172.7 87.6 89.3 84.5 86.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DCR A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DCR B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 503 DBREF 5M0P A 1 422 UNP E9NSU2 E9NSU2_9STAP 1 422 DBREF 5M0P B 1 422 UNP E9NSU2 E9NSU2_9STAP 1 422 SEQADV 5M0P HIS A -5 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS A -4 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS A -3 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS A -2 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS A -1 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS A 0 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P ALA A 79 UNP E9NSU2 PHE 79 ENGINEERED MUTATION SEQADV 5M0P HIS B -5 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS B -4 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS B -3 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS B -2 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS B -1 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P HIS B 0 UNP E9NSU2 EXPRESSION TAG SEQADV 5M0P ALA B 79 UNP E9NSU2 PHE 79 ENGINEERED MUTATION SEQRES 1 A 428 HIS HIS HIS HIS HIS HIS MET ALA THR LEU LYS ARG ASP SEQRES 2 A 428 LYS GLY LEU ASP ASN THR LEU LYS VAL LEU LYS GLN GLY SEQRES 3 A 428 TYR LEU TYR THR THR ASN GLN ARG ASN ARG LEU ASN THR SEQRES 4 A 428 SER VAL PHE GLN THR LYS ALA LEU GLY GLY LYS PRO PHE SEQRES 5 A 428 VAL VAL VAL THR GLY LYS GLU GLY ALA GLU MET PHE TYR SEQRES 6 A 428 ASN ASN ASP VAL VAL GLN ARG GLU GLY MET LEU PRO LYS SEQRES 7 A 428 ARG ILE VAL ASN THR LEU ALA GLY LYS GLY ALA ILE HIS SEQRES 8 A 428 THR VAL ASP GLY LYS LYS HIS VAL ASP ARG LYS ALA LEU SEQRES 9 A 428 PHE MET SER LEU MET THR GLU GLY ASN LEU ASN TYR VAL SEQRES 10 A 428 ARG GLU LEU THR ARG THR LEU TRP HIS ALA ASN THR GLN SEQRES 11 A 428 ARG MET GLU SER MET ASP GLU VAL ASN ILE TYR ARG GLU SEQRES 12 A 428 SER ILE VAL LEU LEU THR LYS VAL GLY THR ARG TRP ALA SEQRES 13 A 428 GLY VAL GLN ALA PRO PRO GLU ASP ILE GLU ARG ILE ALA SEQRES 14 A 428 THR ASP MET ASP ILE MET ILE ASP SER PHE ARG ALA LEU SEQRES 15 A 428 GLY GLY ALA PHE LYS GLY TYR LYS ALA SER LYS GLU ALA SEQRES 16 A 428 ARG ARG ARG VAL GLU ASP TRP LEU GLU GLU GLN ILE ILE SEQRES 17 A 428 GLU THR ARG LYS GLY ASN ILE HIS PRO PRO GLU GLY THR SEQRES 18 A 428 ALA LEU TYR GLU PHE ALA HIS TRP GLU ASP TYR LEU GLY SEQRES 19 A 428 ASN PRO MET ASP SER ARG THR CYS ALA ILE ASP LEU MET SEQRES 20 A 428 ASN THR PHE ARG PRO LEU ILE ALA ILE ASN ARG PHE VAL SEQRES 21 A 428 SER PHE GLY LEU HIS ALA MET ASN GLU ASN PRO ILE THR SEQRES 22 A 428 ARG GLU LYS ILE LYS SER GLU PRO ASP TYR ALA TYR LYS SEQRES 23 A 428 PHE ALA GLN GLU VAL ARG ARG TYR TYR PRO PHE VAL PRO SEQRES 24 A 428 PHE LEU PRO GLY LYS ALA LYS VAL ASP ILE ASP PHE GLN SEQRES 25 A 428 GLY VAL THR ILE PRO ALA GLY VAL GLY LEU ALA LEU ASP SEQRES 26 A 428 VAL TYR GLY THR THR HIS ASP GLU SER LEU TRP ASP ASP SEQRES 27 A 428 PRO ASN GLU PHE ARG PRO GLU ARG PHE GLU THR TRP ASP SEQRES 28 A 428 GLY SER PRO PHE ASP LEU ILE PRO GLN GLY GLY GLY ASP SEQRES 29 A 428 TYR TRP THR ASN HIS ARG CYS ALA GLY GLU TRP ILE THR SEQRES 30 A 428 VAL ILE ILE MET GLU GLU THR MET LYS TYR PHE ALA GLU SEQRES 31 A 428 LYS ILE THR TYR ASP VAL PRO GLU GLN ASP LEU GLU VAL SEQRES 32 A 428 ASP LEU ASN SER ILE PRO GLY TYR VAL LYS SER GLY PHE SEQRES 33 A 428 VAL ILE LYS ASN VAL ARG GLU VAL VAL ASP ARG THR SEQRES 1 B 428 HIS HIS HIS HIS HIS HIS MET ALA THR LEU LYS ARG ASP SEQRES 2 B 428 LYS GLY LEU ASP ASN THR LEU LYS VAL LEU LYS GLN GLY SEQRES 3 B 428 TYR LEU TYR THR THR ASN GLN ARG ASN ARG LEU ASN THR SEQRES 4 B 428 SER VAL PHE GLN THR LYS ALA LEU GLY GLY LYS PRO PHE SEQRES 5 B 428 VAL VAL VAL THR GLY LYS GLU GLY ALA GLU MET PHE TYR SEQRES 6 B 428 ASN ASN ASP VAL VAL GLN ARG GLU GLY MET LEU PRO LYS SEQRES 7 B 428 ARG ILE VAL ASN THR LEU ALA GLY LYS GLY ALA ILE HIS SEQRES 8 B 428 THR VAL ASP GLY LYS LYS HIS VAL ASP ARG LYS ALA LEU SEQRES 9 B 428 PHE MET SER LEU MET THR GLU GLY ASN LEU ASN TYR VAL SEQRES 10 B 428 ARG GLU LEU THR ARG THR LEU TRP HIS ALA ASN THR GLN SEQRES 11 B 428 ARG MET GLU SER MET ASP GLU VAL ASN ILE TYR ARG GLU SEQRES 12 B 428 SER ILE VAL LEU LEU THR LYS VAL GLY THR ARG TRP ALA SEQRES 13 B 428 GLY VAL GLN ALA PRO PRO GLU ASP ILE GLU ARG ILE ALA SEQRES 14 B 428 THR ASP MET ASP ILE MET ILE ASP SER PHE ARG ALA LEU SEQRES 15 B 428 GLY GLY ALA PHE LYS GLY TYR LYS ALA SER LYS GLU ALA SEQRES 16 B 428 ARG ARG ARG VAL GLU ASP TRP LEU GLU GLU GLN ILE ILE SEQRES 17 B 428 GLU THR ARG LYS GLY ASN ILE HIS PRO PRO GLU GLY THR SEQRES 18 B 428 ALA LEU TYR GLU PHE ALA HIS TRP GLU ASP TYR LEU GLY SEQRES 19 B 428 ASN PRO MET ASP SER ARG THR CYS ALA ILE ASP LEU MET SEQRES 20 B 428 ASN THR PHE ARG PRO LEU ILE ALA ILE ASN ARG PHE VAL SEQRES 21 B 428 SER PHE GLY LEU HIS ALA MET ASN GLU ASN PRO ILE THR SEQRES 22 B 428 ARG GLU LYS ILE LYS SER GLU PRO ASP TYR ALA TYR LYS SEQRES 23 B 428 PHE ALA GLN GLU VAL ARG ARG TYR TYR PRO PHE VAL PRO SEQRES 24 B 428 PHE LEU PRO GLY LYS ALA LYS VAL ASP ILE ASP PHE GLN SEQRES 25 B 428 GLY VAL THR ILE PRO ALA GLY VAL GLY LEU ALA LEU ASP SEQRES 26 B 428 VAL TYR GLY THR THR HIS ASP GLU SER LEU TRP ASP ASP SEQRES 27 B 428 PRO ASN GLU PHE ARG PRO GLU ARG PHE GLU THR TRP ASP SEQRES 28 B 428 GLY SER PRO PHE ASP LEU ILE PRO GLN GLY GLY GLY ASP SEQRES 29 B 428 TYR TRP THR ASN HIS ARG CYS ALA GLY GLU TRP ILE THR SEQRES 30 B 428 VAL ILE ILE MET GLU GLU THR MET LYS TYR PHE ALA GLU SEQRES 31 B 428 LYS ILE THR TYR ASP VAL PRO GLU GLN ASP LEU GLU VAL SEQRES 32 B 428 ASP LEU ASN SER ILE PRO GLY TYR VAL LYS SER GLY PHE SEQRES 33 B 428 VAL ILE LYS ASN VAL ARG GLU VAL VAL ASP ARG THR HET HEM A 501 43 HET DCR A 502 22 HET HEM B 501 43 HET DCR B 502 22 HET NA B 503 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM DCR ICOSANOIC ACID HETNAM NA SODIUM ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 DCR 2(C20 H40 O2) FORMUL 7 NA NA 1+ FORMUL 8 HOH *701(H2 O) HELIX 1 AA1 ASN A 12 GLY A 20 1 9 HELIX 2 AA2 LEU A 22 ASN A 32 1 11 HELIX 3 AA3 THR A 50 TYR A 59 1 10 HELIX 4 AA4 PRO A 71 LEU A 78 1 8 HELIX 5 AA5 ALA A 83 VAL A 87 5 5 HELIX 6 AA6 ASP A 88 LEU A 102 1 15 HELIX 7 AA7 THR A 104 MET A 129 1 26 HELIX 8 AA8 ILE A 134 ALA A 150 1 17 HELIX 9 AA9 PRO A 155 GLU A 157 5 3 HELIX 10 AB1 ASP A 158 SER A 172 1 15 HELIX 11 AB2 GLY A 182 LYS A 206 1 25 HELIX 12 AB3 THR A 215 TRP A 223 1 9 HELIX 13 AB4 ASP A 232 ASN A 242 1 11 HELIX 14 AB5 PHE A 244 ALA A 249 1 6 HELIX 15 AB6 ILE A 250 ASN A 264 1 15 HELIX 16 AB7 PRO A 265 GLU A 274 1 10 HELIX 17 AB8 ASP A 276 TYR A 289 1 14 HELIX 18 AB9 VAL A 320 HIS A 325 1 6 HELIX 19 AC1 ARG A 337 THR A 343 5 7 HELIX 20 AC2 GLY A 367 LYS A 385 1 19 HELIX 21 AC3 ASN B 12 GLY B 20 1 9 HELIX 22 AC4 LEU B 22 ASN B 32 1 11 HELIX 23 AC5 THR B 50 TYR B 59 1 10 HELIX 24 AC6 PRO B 71 LEU B 78 1 8 HELIX 25 AC7 ALA B 83 VAL B 87 5 5 HELIX 26 AC8 ASP B 88 LEU B 102 1 15 HELIX 27 AC9 THR B 104 MET B 129 1 26 HELIX 28 AD1 ILE B 134 ALA B 150 1 17 HELIX 29 AD2 PRO B 155 GLU B 157 5 3 HELIX 30 AD3 ASP B 158 SER B 172 1 15 HELIX 31 AD4 GLY B 182 LYS B 206 1 25 HELIX 32 AD5 THR B 215 TRP B 223 1 9 HELIX 33 AD6 ASP B 232 ASN B 242 1 11 HELIX 34 AD7 PHE B 244 ALA B 249 1 6 HELIX 35 AD8 ILE B 250 ASN B 264 1 15 HELIX 36 AD9 PRO B 265 GLU B 274 1 10 HELIX 37 AE1 ASP B 276 TYR B 289 1 14 HELIX 38 AE2 VAL B 320 HIS B 325 1 6 HELIX 39 AE3 ARG B 337 THR B 343 5 7 HELIX 40 AE4 GLY B 367 LYS B 385 1 19 SHEET 1 AA1 5 PHE A 36 ALA A 40 0 SHEET 2 AA1 5 LYS A 44 VAL A 49 -1 O PHE A 46 N THR A 38 SHEET 3 AA1 5 GLY A 315 ASP A 319 1 O ASP A 319 N VAL A 49 SHEET 4 AA1 5 PHE A 294 ALA A 299 -1 N GLY A 297 O LEU A 316 SHEET 5 AA1 5 VAL A 64 GLN A 65 -1 N GLN A 65 O LYS A 298 SHEET 1 AA2 3 VAL A 132 ASN A 133 0 SHEET 2 AA2 3 VAL A 411 GLU A 417 -1 O ILE A 412 N VAL A 132 SHEET 3 AA2 3 ILE A 386 ASP A 389 -1 N ASP A 389 O LYS A 413 SHEET 1 AA3 2 ILE A 303 PHE A 305 0 SHEET 2 AA3 2 VAL A 308 ILE A 310 -1 O ILE A 310 N ILE A 303 SHEET 1 AA4 6 ARG B 6 ASP B 7 0 SHEET 2 AA4 6 PHE B 36 ALA B 40 1 O GLN B 37 N ASP B 7 SHEET 3 AA4 6 LYS B 44 VAL B 49 -1 O PHE B 46 N THR B 38 SHEET 4 AA4 6 GLY B 315 ASP B 319 1 O ASP B 319 N VAL B 49 SHEET 5 AA4 6 PHE B 294 ALA B 299 -1 N GLY B 297 O LEU B 316 SHEET 6 AA4 6 VAL B 64 GLN B 65 -1 N GLN B 65 O LYS B 298 SHEET 1 AA5 3 GLU B 131 ASN B 133 0 SHEET 2 AA5 3 VAL B 411 GLU B 417 -1 O ILE B 412 N VAL B 132 SHEET 3 AA5 3 ILE B 386 ASP B 389 -1 N ASP B 389 O LYS B 413 SHEET 1 AA6 2 ILE B 303 PHE B 305 0 SHEET 2 AA6 2 VAL B 308 ILE B 310 -1 O ILE B 310 N ILE B 303 LINK SG CYS A 365 FE HEM A 501 1555 1555 2.53 LINK SG CYS B 365 FE HEM B 501 1555 1555 2.53 LINK OD1 ASP B 389 NA NA B 503 1555 1555 2.14 LINK FE HEM A 501 O HOH A 795 1555 1555 2.41 LINK FE HEM B 501 O HOH B 855 1555 1555 2.50 LINK NA NA B 503 O HOH B 843 1555 1555 1.97 LINK NA NA B 503 O HOH B 737 1555 1555 2.14 LINK OD2 ASP B 332 NA NA B 503 1555 4535 2.25 LINK NA NA B 503 O HOH B 619 1555 4435 2.09 LINK NA NA B 503 O HOH B 623 1555 4435 2.15 CISPEP 1 HIS A -1 HIS A 0 0 0.94 CISPEP 2 ILE A 402 PRO A 403 0 1.90 CISPEP 3 ILE B 402 PRO B 403 0 0.73 SITE 1 AC1 23 TYR A 59 ARG A 66 HIS A 85 HIS A 92 SITE 2 AC1 23 LYS A 96 PHE A 99 THR A 243 PRO A 246 SITE 3 AC1 23 LEU A 247 ALA A 249 ILE A 250 PHE A 253 SITE 4 AC1 23 VAL A 292 LEU A 295 GLN A 354 HIS A 363 SITE 5 AC1 23 CYS A 365 ALA A 366 GLY A 367 ILE A 370 SITE 6 AC1 23 THR A 371 HOH A 774 HOH A 795 SITE 1 AC2 6 LEU A 78 ARG A 245 PRO A 246 PHE A 294 SITE 2 AC2 6 HOH A 613 HOH A 795 SITE 1 AC3 23 TYR B 59 ARG B 66 HIS B 85 HIS B 92 SITE 2 AC3 23 LYS B 96 PHE B 99 ASN B 242 THR B 243 SITE 3 AC3 23 PRO B 246 LEU B 247 PHE B 253 PHE B 291 SITE 4 AC3 23 VAL B 292 LEU B 295 GLN B 354 HIS B 363 SITE 5 AC3 23 CYS B 365 GLY B 367 ILE B 370 THR B 371 SITE 6 AC3 23 DCR B 502 HOH B 767 HOH B 855 SITE 1 AC4 7 LEU B 78 ILE B 170 ARG B 245 PRO B 246 SITE 2 AC4 7 PHE B 294 HEM B 501 HOH B 748 SITE 1 AC5 6 ASP B 332 ASP B 389 HOH B 619 HOH B 623 SITE 2 AC5 6 HOH B 737 HOH B 843 CRYST1 51.880 110.120 164.850 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019275 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009081 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006066 0.00000