HEADER CELL ADHESION 14-OCT-16 5M3D TITLE STRUCTURAL TUNING OF CD81LEL (SPACE GROUP P31) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CD81 ANTIGEN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 112-201; COMPND 5 SYNONYM: 26 KDA CELL SURFACE PROTEIN TAPA-1,TARGET OF THE COMPND 6 ANTIPROLIFERATIVE ANTIBODY 1,TETRASPANIN-28,TSPAN-28; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD81, TAPA1, TSPAN28; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS HUMAN CELLULAR RECEPTOR FOR HEPATITIS C VIRUS, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR E.S.CUNHA,P.SFRISO,A.L.ROJAS,P.ROVERSI,A.HOSPITAL,M.OROZCO, AUTHOR 2 N.G.ABRESCIA REVDAT 4 17-JAN-24 5M3D 1 REMARK REVDAT 3 13-DEC-17 5M3D 1 AUTHOR JRNL REVDAT 2 18-JAN-17 5M3D 1 JRNL REVDAT 1 14-DEC-16 5M3D 0 JRNL AUTH E.S.CUNHA,P.SFRISO,A.L.ROJAS,P.ROVERSI,A.HOSPITAL,M.OROZCO, JRNL AUTH 2 N.G.ABRESCIA JRNL TITL MECHANISM OF STRUCTURAL TUNING OF THE HEPATITIS C VIRUS JRNL TITL 2 HUMAN CELLULAR RECEPTOR CD81 LARGE EXTRACELLULAR LOOP. JRNL REF STRUCTURE V. 25 53 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 27916518 JRNL DOI 10.1016/J.STR.2016.11.003 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.KITADOKORO,D.BORDO,G.GALLI,R.PETRACCA,F.FALUGI, REMARK 1 AUTH 2 S.ABRIGNANI,G.GRANDI,M.BOLOGNESI REMARK 1 TITL CD81 EXTRACELLULAR DOMAIN 3D STRUCTURE: INSIGHT INTO THE REMARK 1 TITL 2 TETRASPANIN SUPERFAMILY STRUCTURAL MOTIFS. REMARK 1 REF EMBO J. V. 20 12 2001 REMARK 1 REFN ISSN 0261-4189 REMARK 1 PMID 11226150 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.KITADOKORO,M.PONASSI,G.GALLI,R.PETRACCA,F.FALUGI,G.GRANDI, REMARK 1 AUTH 2 M.BOLOGNESI REMARK 1 TITL SUBUNIT ASSOCIATION AND CONFORMATIONAL FLEXIBILITY IN THE REMARK 1 TITL 2 HEAD SUBDOMAIN OF HUMAN CD81 LARGE EXTRACELLULAR LOOP. REMARK 1 REF BIOL. CHEM. V. 383 1447 2002 REMARK 1 REFN ISSN 1431-6730 REMARK 1 PMID 12437138 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.250 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 14539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9843 - 4.0693 0.96 2707 135 0.1636 0.2060 REMARK 3 2 4.0693 - 3.2301 0.98 2738 164 0.1628 0.2079 REMARK 3 3 3.2301 - 2.8219 0.99 2782 139 0.1909 0.2547 REMARK 3 4 2.8219 - 2.5639 0.99 2793 156 0.1940 0.2648 REMARK 3 5 2.5639 - 2.3801 0.99 2779 146 0.2350 0.2895 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2810 REMARK 3 ANGLE : 1.009 3773 REMARK 3 CHIRALITY : 0.036 442 REMARK 3 PLANARITY : 0.004 489 REMARK 3 DIHEDRAL : 14.737 1005 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 113:157 OR RESID 189:202) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9456 -21.0892 4.1491 REMARK 3 T TENSOR REMARK 3 T11: 0.5959 T22: 0.4945 REMARK 3 T33: 0.6228 T12: 0.0932 REMARK 3 T13: 0.0273 T23: 0.0895 REMARK 3 L TENSOR REMARK 3 L11: 6.7332 L22: 7.4793 REMARK 3 L33: 5.5403 L12: -2.3676 REMARK 3 L13: 0.0508 L23: -1.6865 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: 0.2340 S13: 0.4144 REMARK 3 S21: -0.4586 S22: -0.3078 S23: -0.9503 REMARK 3 S31: -0.0918 S32: 0.6288 S33: 0.2395 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 158:188) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5098 -32.8942 10.9578 REMARK 3 T TENSOR REMARK 3 T11: 0.7139 T22: 0.6223 REMARK 3 T33: 0.6973 T12: 0.1339 REMARK 3 T13: 0.0890 T23: 0.1913 REMARK 3 L TENSOR REMARK 3 L11: 5.5292 L22: 3.7022 REMARK 3 L33: 3.4252 L12: 0.5987 REMARK 3 L13: -1.2299 L23: -1.9372 REMARK 3 S TENSOR REMARK 3 S11: -0.4684 S12: -0.7745 S13: -1.0698 REMARK 3 S21: 0.1258 S22: -0.1079 S23: -0.3008 REMARK 3 S31: 0.6533 S32: 0.0833 S33: 0.5647 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 113:157 OR RESID 189:202) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8504 -30.3073 -7.2844 REMARK 3 T TENSOR REMARK 3 T11: 0.3232 T22: 0.5171 REMARK 3 T33: 0.5005 T12: -0.0199 REMARK 3 T13: -0.0640 T23: 0.0687 REMARK 3 L TENSOR REMARK 3 L11: 9.0603 L22: 5.9552 REMARK 3 L33: 6.5206 L12: 0.5761 REMARK 3 L13: 0.8577 L23: 0.1926 REMARK 3 S TENSOR REMARK 3 S11: -0.1845 S12: 0.6224 S13: 0.9159 REMARK 3 S21: -0.1268 S22: -0.3069 S23: -0.0525 REMARK 3 S31: -0.5465 S32: 0.3256 S33: 0.4396 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 158:188) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7333 -38.5764 -0.5159 REMARK 3 T TENSOR REMARK 3 T11: 0.5074 T22: 0.7335 REMARK 3 T33: 0.6532 T12: -0.0110 REMARK 3 T13: -0.1135 T23: 0.1568 REMARK 3 L TENSOR REMARK 3 L11: 4.7777 L22: 2.9545 REMARK 3 L33: 4.5977 L12: 0.3327 REMARK 3 L13: 0.2902 L23: -2.4907 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: -0.5891 S13: -0.0735 REMARK 3 S21: 0.2083 S22: -0.7031 S23: -0.6949 REMARK 3 S31: 0.2573 S32: 0.8147 S33: 0.5643 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN C AND (RESID 114:157 OR RESID 189:202) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4606 -33.0810 -13.2174 REMARK 3 T TENSOR REMARK 3 T11: 0.3910 T22: 0.6501 REMARK 3 T33: 0.5192 T12: 0.1169 REMARK 3 T13: -0.0893 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 7.1886 L22: 6.1499 REMARK 3 L33: 5.4794 L12: 0.2392 REMARK 3 L13: 1.0105 L23: -0.1717 REMARK 3 S TENSOR REMARK 3 S11: 0.0150 S12: 0.4284 S13: 0.6121 REMARK 3 S21: -0.3264 S22: -0.1896 S23: -0.0217 REMARK 3 S31: -0.1538 S32: -0.0068 S33: 0.2796 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN C AND (RESID 158:188) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6337 -41.9077 -9.3696 REMARK 3 T TENSOR REMARK 3 T11: 0.6312 T22: 0.7207 REMARK 3 T33: 0.8526 T12: 0.0692 REMARK 3 T13: -0.0996 T23: -0.1040 REMARK 3 L TENSOR REMARK 3 L11: 3.4225 L22: 4.3894 REMARK 3 L33: 4.0116 L12: 1.4232 REMARK 3 L13: 0.9808 L23: -0.8909 REMARK 3 S TENSOR REMARK 3 S11: 0.0846 S12: -0.5780 S13: -0.4462 REMARK 3 S21: 0.0814 S22: -0.4686 S23: 0.8238 REMARK 3 S31: 0.6795 S32: -0.3344 S33: 0.2900 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN D AND (RESID 114:157 OR RESID 189:202) REMARK 3 ORIGIN FOR THE GROUP (A): -31.9047 -10.9892 -1.7281 REMARK 3 T TENSOR REMARK 3 T11: 0.6623 T22: 0.3819 REMARK 3 T33: 0.5349 T12: 0.0131 REMARK 3 T13: -0.0262 T23: 0.0796 REMARK 3 L TENSOR REMARK 3 L11: 6.5627 L22: 7.0008 REMARK 3 L33: 5.7007 L12: -1.5939 REMARK 3 L13: 0.1050 L23: -0.0081 REMARK 3 S TENSOR REMARK 3 S11: -0.1422 S12: 0.3115 S13: 0.2562 REMARK 3 S21: -0.5756 S22: 0.0207 S23: -0.5069 REMARK 3 S31: -0.1300 S32: 0.1879 S33: 0.1600 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN D AND (RESID 158:188) REMARK 3 ORIGIN FOR THE GROUP (A): -44.5872 -6.5503 2.0753 REMARK 3 T TENSOR REMARK 3 T11: 0.6622 T22: 0.4958 REMARK 3 T33: 0.7157 T12: 0.0111 REMARK 3 T13: -0.1361 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 5.9927 L22: 3.5831 REMARK 3 L33: 4.8902 L12: -0.7752 REMARK 3 L13: 0.4391 L23: -0.6653 REMARK 3 S TENSOR REMARK 3 S11: -0.4602 S12: -0.4947 S13: 0.1338 REMARK 3 S21: 0.2125 S22: 0.0435 S23: 0.5862 REMARK 3 S31: -0.0166 S32: -0.5277 S33: 0.3563 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5M3D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200001789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14545 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 48.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.71200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1G8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 10 MG/ML BUFFER: 40% ETOH, REMARK 280 0.097 M CITRATE PH 2.2, 0.113 M NA2HPO4 PH 9.3, (PH ~6) 2.5% PEG REMARK 280 1000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 11.46967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.93933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 110 REMARK 465 THR A 111 REMARK 465 GLY A 112 REMARK 465 THR A 203 REMARK 465 LYS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 465 HIS A 210 REMARK 465 GLU B 110 REMARK 465 THR B 111 REMARK 465 THR B 203 REMARK 465 LYS B 204 REMARK 465 HIS B 205 REMARK 465 HIS B 206 REMARK 465 HIS B 207 REMARK 465 HIS B 208 REMARK 465 HIS B 209 REMARK 465 HIS B 210 REMARK 465 GLU C 110 REMARK 465 THR C 111 REMARK 465 GLY C 112 REMARK 465 PHE C 113 REMARK 465 THR C 203 REMARK 465 LYS C 204 REMARK 465 HIS C 205 REMARK 465 HIS C 206 REMARK 465 HIS C 207 REMARK 465 HIS C 208 REMARK 465 HIS C 209 REMARK 465 HIS C 210 REMARK 465 GLU D 110 REMARK 465 THR D 111 REMARK 465 GLY D 112 REMARK 465 PHE D 113 REMARK 465 THR D 203 REMARK 465 LYS D 204 REMARK 465 HIS D 205 REMARK 465 HIS D 206 REMARK 465 HIS D 207 REMARK 465 HIS D 208 REMARK 465 HIS D 209 REMARK 465 HIS D 210 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO C 176 OG SER C 179 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS B 157 17.29 -144.73 REMARK 500 LYS C 171 58.66 -140.19 REMARK 500 ASP D 139 26.97 -143.47 REMARK 500 CYS D 157 18.36 -146.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 D 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M2C RELATED DB: PDB REMARK 900 RELATED ID: 5M33 RELATED DB: PDB REMARK 900 RELATED ID: 5M4R RELATED DB: PDB REMARK 900 RELATED ID: 5M3T RELATED DB: PDB REMARK 900 RELATED ID: 1G8Q RELATED DB: PDB REMARK 900 RELATED ID: 1IV5 RELATED DB: PDB DBREF 5M3D A 112 201 UNP P60033 CD81_HUMAN 112 201 DBREF 5M3D B 112 201 UNP P60033 CD81_HUMAN 112 201 DBREF 5M3D C 112 201 UNP P60033 CD81_HUMAN 112 201 DBREF 5M3D D 112 201 UNP P60033 CD81_HUMAN 112 201 SEQADV 5M3D GLU A 110 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR A 111 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLY A 202 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR A 203 UNP P60033 EXPRESSION TAG SEQADV 5M3D LYS A 204 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS A 205 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS A 206 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS A 207 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS A 208 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS A 209 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS A 210 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLU B 110 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR B 111 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLY B 202 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR B 203 UNP P60033 EXPRESSION TAG SEQADV 5M3D LYS B 204 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS B 205 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS B 206 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS B 207 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS B 208 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS B 209 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS B 210 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLU C 110 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR C 111 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLY C 202 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR C 203 UNP P60033 EXPRESSION TAG SEQADV 5M3D LYS C 204 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS C 205 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS C 206 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS C 207 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS C 208 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS C 209 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS C 210 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLU D 110 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR D 111 UNP P60033 EXPRESSION TAG SEQADV 5M3D GLY D 202 UNP P60033 EXPRESSION TAG SEQADV 5M3D THR D 203 UNP P60033 EXPRESSION TAG SEQADV 5M3D LYS D 204 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS D 205 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS D 206 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS D 207 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS D 208 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS D 209 UNP P60033 EXPRESSION TAG SEQADV 5M3D HIS D 210 UNP P60033 EXPRESSION TAG SEQRES 1 A 101 GLU THR GLY PHE VAL ASN LYS ASP GLN ILE ALA LYS ASP SEQRES 2 A 101 VAL LYS GLN PHE TYR ASP GLN ALA LEU GLN GLN ALA VAL SEQRES 3 A 101 VAL ASP ASP ASP ALA ASN ASN ALA LYS ALA VAL VAL LYS SEQRES 4 A 101 THR PHE HIS GLU THR LEU ASP CYS CYS GLY SER SER THR SEQRES 5 A 101 LEU THR ALA LEU THR THR SER VAL LEU LYS ASN ASN LEU SEQRES 6 A 101 CYS PRO SER GLY SER ASN ILE ILE SER ASN LEU PHE LYS SEQRES 7 A 101 GLU ASP CYS HIS GLN LYS ILE ASP ASP LEU PHE SER GLY SEQRES 8 A 101 LYS GLY THR LYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 101 GLU THR GLY PHE VAL ASN LYS ASP GLN ILE ALA LYS ASP SEQRES 2 B 101 VAL LYS GLN PHE TYR ASP GLN ALA LEU GLN GLN ALA VAL SEQRES 3 B 101 VAL ASP ASP ASP ALA ASN ASN ALA LYS ALA VAL VAL LYS SEQRES 4 B 101 THR PHE HIS GLU THR LEU ASP CYS CYS GLY SER SER THR SEQRES 5 B 101 LEU THR ALA LEU THR THR SER VAL LEU LYS ASN ASN LEU SEQRES 6 B 101 CYS PRO SER GLY SER ASN ILE ILE SER ASN LEU PHE LYS SEQRES 7 B 101 GLU ASP CYS HIS GLN LYS ILE ASP ASP LEU PHE SER GLY SEQRES 8 B 101 LYS GLY THR LYS HIS HIS HIS HIS HIS HIS SEQRES 1 C 101 GLU THR GLY PHE VAL ASN LYS ASP GLN ILE ALA LYS ASP SEQRES 2 C 101 VAL LYS GLN PHE TYR ASP GLN ALA LEU GLN GLN ALA VAL SEQRES 3 C 101 VAL ASP ASP ASP ALA ASN ASN ALA LYS ALA VAL VAL LYS SEQRES 4 C 101 THR PHE HIS GLU THR LEU ASP CYS CYS GLY SER SER THR SEQRES 5 C 101 LEU THR ALA LEU THR THR SER VAL LEU LYS ASN ASN LEU SEQRES 6 C 101 CYS PRO SER GLY SER ASN ILE ILE SER ASN LEU PHE LYS SEQRES 7 C 101 GLU ASP CYS HIS GLN LYS ILE ASP ASP LEU PHE SER GLY SEQRES 8 C 101 LYS GLY THR LYS HIS HIS HIS HIS HIS HIS SEQRES 1 D 101 GLU THR GLY PHE VAL ASN LYS ASP GLN ILE ALA LYS ASP SEQRES 2 D 101 VAL LYS GLN PHE TYR ASP GLN ALA LEU GLN GLN ALA VAL SEQRES 3 D 101 VAL ASP ASP ASP ALA ASN ASN ALA LYS ALA VAL VAL LYS SEQRES 4 D 101 THR PHE HIS GLU THR LEU ASP CYS CYS GLY SER SER THR SEQRES 5 D 101 LEU THR ALA LEU THR THR SER VAL LEU LYS ASN ASN LEU SEQRES 6 D 101 CYS PRO SER GLY SER ASN ILE ILE SER ASN LEU PHE LYS SEQRES 7 D 101 GLU ASP CYS HIS GLN LYS ILE ASP ASP LEU PHE SER GLY SEQRES 8 D 101 LYS GLY THR LYS HIS HIS HIS HIS HIS HIS HET EDO A 301 10 HET EDO A 302 10 HET PO4 B 301 5 HET PO4 B 302 5 HET EDO B 303 10 HET PO4 C 301 5 HET PO4 C 302 5 HET EDO C 303 10 HET PO4 D 601 5 HET PO4 D 602 5 HET EDO D 603 10 HET EDO D 604 10 HETNAM EDO 1,2-ETHANEDIOL HETNAM PO4 PHOSPHATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 6(C2 H6 O2) FORMUL 7 PO4 6(O4 P 3-) FORMUL 17 HOH *10(H2 O) HELIX 1 AA1 ASN A 115 ASP A 137 1 23 HELIX 2 AA2 ALA A 140 ASP A 155 1 16 HELIX 3 AA3 SER A 160 LYS A 171 1 12 HELIX 4 AA4 ASN A 172 CYS A 175 5 4 HELIX 5 AA5 ASN A 180 PHE A 186 5 7 HELIX 6 AA6 ASP A 189 GLY A 200 1 12 HELIX 7 AA7 ASN B 115 ASP B 137 1 23 HELIX 8 AA8 ALA B 140 ASP B 155 1 16 HELIX 9 AA9 SER B 160 LYS B 171 1 12 HELIX 10 AB1 ASN B 172 CYS B 175 5 4 HELIX 11 AB2 ILE B 182 LYS B 187 1 6 HELIX 12 AB3 ASP B 189 GLY B 200 1 12 HELIX 13 AB4 ASN C 115 VAL C 135 1 21 HELIX 14 AB5 ASN C 142 ASP C 155 1 14 HELIX 15 AB6 SER C 160 LYS C 171 1 12 HELIX 16 AB7 ASN C 172 CYS C 175 5 4 HELIX 17 AB8 ILE C 181 PHE C 186 5 6 HELIX 18 AB9 ASP C 189 GLY C 200 1 12 HELIX 19 AC1 ASN D 115 VAL D 136 1 22 HELIX 20 AC2 ASN D 142 ASP D 155 1 14 HELIX 21 AC3 SER D 160 LYS D 171 1 12 HELIX 22 AC4 ASN D 172 CYS D 175 5 4 HELIX 23 AC5 ILE D 181 PHE D 186 5 6 HELIX 24 AC6 ASP D 189 GLY D 200 1 12 SSBOND 1 CYS A 156 CYS A 190 1555 1555 2.02 SSBOND 2 CYS A 157 CYS A 175 1555 1555 2.01 SSBOND 3 CYS B 156 CYS B 190 1555 1555 2.01 SSBOND 4 CYS B 157 CYS B 175 1555 1555 2.00 SSBOND 5 CYS C 156 CYS C 190 1555 1555 2.03 SSBOND 6 CYS C 157 CYS C 175 1555 1555 2.03 SSBOND 7 CYS D 156 CYS D 190 1555 1555 2.02 SSBOND 8 CYS D 157 CYS D 175 1555 1555 2.02 CISPEP 1 GLY B 112 PHE B 113 0 4.45 SITE 1 AC1 5 ASN A 172 CYS A 175 PRO A 176 SER A 177 SITE 2 AC1 5 GLY A 178 SITE 1 AC2 4 GLN A 129 ALA A 130 GLN A 133 ASN A 142 SITE 1 AC3 5 SER B 159 SER B 160 ASP B 189 HIS B 191 SITE 2 AC3 5 THR D 161 SITE 1 AC4 6 ASN B 172 CYS B 175 PRO B 176 SER B 177 SITE 2 AC4 6 GLY B 178 SER B 179 SITE 1 AC5 1 GLN B 129 SITE 1 AC6 3 LYS A 121 LYS C 124 HIS C 191 SITE 1 AC7 2 ASP C 139 LYS C 144 SITE 1 AC8 5 ASN C 172 CYS C 175 PRO C 176 GLY C 178 SITE 2 AC8 5 SER C 179 SITE 1 AC9 4 LYS B 121 ASP B 138 LYS D 124 HIS D 191 SITE 1 AD1 2 ASP D 139 LYS D 144 SITE 1 AD2 4 ASN D 172 CYS D 175 PRO D 176 SER D 179 SITE 1 AD3 4 PHE D 126 GLN D 129 ALA D 130 ASN D 141 CRYST1 97.948 97.948 34.409 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010209 0.005894 0.000000 0.00000 SCALE2 0.000000 0.011789 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029062 0.00000