HEADER TRANSFERASE 27-OCT-16 5M7A TITLE BLOOD GROUP SYNTHASE AAGLYB IN COMPLEX WITH UMP AND CRYOPROTECTED WITH TITLE 2 PEG 3350 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTO-BLOOD GROUP ABO SYSTEM TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FUCOSYLGLYCOPROTEIN 3-ALPHA-GALACTOSYLTRANSFERASE, COMPND 5 FUCOSYLGLYCOPROTEIN ALPHA-N-ACETYLGALACTOSAMINYLTRANSFERASE, COMPND 6 GLYCOPROTEIN-FUCOSYLGALACTOSIDE ALPHA-N- COMPND 7 ACETYLGALACTOSAMINYLTRANSFERASE,GLYCOPROTEIN-FUCOSYLGALACTOSIDE COMPND 8 ALPHA-GALACTOSYLTRANSFERASE,HISTO-BLOOD GROUP A TRANSFERASE,A COMPND 9 TRANSFERASE,HISTO-BLOOD GROUP B TRANSFERASE,B TRANSFERASE,NAGAT; COMPND 10 EC: 2.4.1.40,2.4.1.37; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BLOOD GROUP SYNTHASE, GLYCOSYLTRANSFERASE, DUAL-SPECIFICITY, CIS-AB KEYWDS 2 MUTANT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.ROCHA,A.ROYANT REVDAT 2 17-JAN-24 5M7A 1 LINK ATOM REVDAT 1 29-NOV-17 5M7A 0 JRNL AUTH J.ROCHA,G.O.BATOT,M.M.PALCIC,C.BRETON,A.ROYANT JRNL TITL BLOOD GROUP SYNTHASE AAGLYB IN COMPLEX WITH UMP AND JRNL TITL 2 CRYOPROTECTED WITH PEG 3350 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 75815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4364 - 3.9106 0.99 2900 132 0.1437 0.1694 REMARK 3 2 3.9106 - 3.1044 0.99 2749 147 0.1382 0.1689 REMARK 3 3 3.1044 - 2.7121 0.98 2725 156 0.1454 0.1818 REMARK 3 4 2.7121 - 2.4642 0.98 2687 169 0.1289 0.1596 REMARK 3 5 2.4642 - 2.2876 1.00 2706 139 0.1235 0.1409 REMARK 3 6 2.2876 - 2.1528 0.96 2645 140 0.1216 0.1721 REMARK 3 7 2.1528 - 2.0450 0.96 2578 154 0.1281 0.1696 REMARK 3 8 2.0450 - 1.9559 0.99 2720 136 0.1288 0.1431 REMARK 3 9 1.9559 - 1.8806 0.92 2510 119 0.1552 0.1886 REMARK 3 10 1.8806 - 1.8158 0.99 2669 147 0.1290 0.1660 REMARK 3 11 1.8158 - 1.7590 1.00 2717 128 0.1210 0.1669 REMARK 3 12 1.7590 - 1.7087 1.00 2697 151 0.1147 0.1653 REMARK 3 13 1.7087 - 1.6637 0.99 2713 138 0.1149 0.1543 REMARK 3 14 1.6637 - 1.6231 1.00 2695 144 0.1115 0.1565 REMARK 3 15 1.6231 - 1.5862 0.99 2664 141 0.1170 0.1565 REMARK 3 16 1.5862 - 1.5525 0.99 2711 138 0.1204 0.1773 REMARK 3 17 1.5525 - 1.5214 0.98 2613 143 0.1683 0.2361 REMARK 3 18 1.5214 - 1.4927 0.96 2622 146 0.1937 0.2180 REMARK 3 19 1.4927 - 1.4660 0.94 2556 122 0.2291 0.2658 REMARK 3 20 1.4660 - 1.4412 0.96 2588 144 0.2489 0.2989 REMARK 3 21 1.4412 - 1.4179 0.98 2643 148 0.2307 0.2762 REMARK 3 22 1.4179 - 1.3961 1.00 2654 161 0.1758 0.2211 REMARK 3 23 1.3961 - 1.3756 0.99 2671 155 0.1993 0.2668 REMARK 3 24 1.3756 - 1.3562 0.94 2527 112 0.2865 0.3716 REMARK 3 25 1.3562 - 1.3379 1.00 2701 138 0.2233 0.3030 REMARK 3 26 1.3379 - 1.3205 0.99 2677 124 0.2205 0.2651 REMARK 3 27 1.3205 - 1.3040 0.98 2657 148 0.2553 0.2930 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2601 REMARK 3 ANGLE : 1.448 3556 REMARK 3 CHIRALITY : 0.398 378 REMARK 3 PLANARITY : 0.011 459 REMARK 3 DIHEDRAL : 25.982 972 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5M7A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200000996. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76234 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.304 REMARK 200 RESOLUTION RANGE LOW (A) : 42.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.77300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ZGG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOPS BUFFER, MANGANESE CHLORIDE, REMARK 280 AMMONIUM SULFATE, PEG 3350, PH 7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.91750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.91750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.42650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.84200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.42650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.84200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.91750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.42650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.84200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.91750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.42650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.84200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -39.91750 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 772 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 57 REMARK 465 ALA A 58 REMARK 465 ILE A 59 REMARK 465 GLY A 60 REMARK 465 GLU A 61 REMARK 465 LYS A 346 REMARK 465 ASN A 347 REMARK 465 HIS A 348 REMARK 465 GLN A 349 REMARK 465 ALA A 350 REMARK 465 VAL A 351 REMARK 465 ARG A 352 REMARK 465 ASN A 353 REMARK 465 PRO A 354 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 308 O HOH A 503 2.11 REMARK 500 OE2 GLU A 242 O HOH A 504 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 757 O HOH A 760 3454 2.07 REMARK 500 O HOH A 807 O HOH A 807 4555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 113 62.06 39.50 REMARK 500 LYS A 124 -130.46 58.23 REMARK 500 ARG A 199 -40.63 -156.37 REMARK 500 THR A 245 45.82 -84.32 REMARK 500 PHE A 269 104.00 -161.20 REMARK 500 HIS A 301 -133.11 55.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 824 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 825 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 826 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 827 DISTANCE = 6.87 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 211 OD2 REMARK 620 2 ASP A 213 OD1 108.0 REMARK 620 3 U5P A 402 O1P 92.1 93.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 213 OD2 REMARK 620 2 U5P A 402 O1P 100.4 REMARK 620 3 HOH A 643 O 160.0 95.8 REMARK 620 4 HOH A 670 O 79.4 173.8 83.2 REMARK 620 5 HOH A 710 O 87.8 96.4 102.1 89.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U5P A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZGF RELATED DB: PDB REMARK 900 RELATED ID: 3ZGG RELATED DB: PDB REMARK 900 RELATED ID: 5M79 RELATED DB: PDB DBREF 5M7A A 64 354 UNP P16442 BGAT_HUMAN 64 354 SEQADV 5M7A MET A 57 UNP P16442 EXPRESSION TAG SEQADV 5M7A ALA A 58 UNP P16442 EXPRESSION TAG SEQADV 5M7A ILE A 59 UNP P16442 EXPRESSION TAG SEQADV 5M7A GLY A 60 UNP P16442 EXPRESSION TAG SEQADV 5M7A GLU A 61 UNP P16442 EXPRESSION TAG SEQADV 5M7A PHE A 62 UNP P16442 EXPRESSION TAG SEQADV 5M7A MET A 63 UNP P16442 EXPRESSION TAG SEQADV 5M7A GLY A 266 UNP P16442 LEU 266 ENGINEERED MUTATION SEQADV 5M7A ALA A 268 UNP P16442 GLY 268 ENGINEERED MUTATION SEQRES 1 A 298 MET ALA ILE GLY GLU PHE MET VAL SER LEU PRO ARG MET SEQRES 2 A 298 VAL TYR PRO GLN PRO LYS VAL LEU THR PRO CYS ARG LYS SEQRES 3 A 298 ASP VAL LEU VAL VAL THR PRO TRP LEU ALA PRO ILE VAL SEQRES 4 A 298 TRP GLU GLY THR PHE ASN ILE ASP ILE LEU ASN GLU GLN SEQRES 5 A 298 PHE ARG LEU GLN ASN THR THR ILE GLY LEU THR VAL PHE SEQRES 6 A 298 ALA ILE LYS LYS TYR VAL ALA PHE LEU LYS LEU PHE LEU SEQRES 7 A 298 GLU THR ALA GLU LYS HIS PHE MET VAL GLY HIS ARG VAL SEQRES 8 A 298 HIS TYR TYR VAL PHE THR ASP GLN PRO ALA ALA VAL PRO SEQRES 9 A 298 ARG VAL THR LEU GLY THR GLY ARG GLN LEU SER VAL LEU SEQRES 10 A 298 GLU VAL ARG ALA TYR LYS ARG TRP GLN ASP VAL SER MET SEQRES 11 A 298 ARG ARG MET GLU MET ILE SER ASP PHE CYS GLU ARG ARG SEQRES 12 A 298 PHE LEU SER GLU VAL ASP TYR LEU VAL CYS VAL ASP VAL SEQRES 13 A 298 ASP MET GLU PHE ARG ASP HIS VAL GLY VAL GLU ILE LEU SEQRES 14 A 298 THR PRO LEU PHE GLY THR LEU HIS PRO GLY PHE TYR GLY SEQRES 15 A 298 SER SER ARG GLU ALA PHE THR TYR GLU ARG ARG PRO GLN SEQRES 16 A 298 SER GLN ALA TYR ILE PRO LYS ASP GLU GLY ASP PHE TYR SEQRES 17 A 298 TYR GLY GLY ALA PHE PHE GLY GLY SER VAL GLN GLU VAL SEQRES 18 A 298 GLN ARG LEU THR ARG ALA CYS HIS GLN ALA MET MET VAL SEQRES 19 A 298 ASP GLN ALA ASN GLY ILE GLU ALA VAL TRP HIS ASP GLU SEQRES 20 A 298 SER HIS LEU ASN LYS TYR LEU LEU ARG HIS LYS PRO THR SEQRES 21 A 298 LYS VAL LEU SER PRO GLU TYR LEU TRP ASP GLN GLN LEU SEQRES 22 A 298 LEU GLY TRP PRO ALA VAL LEU ARG LYS LEU ARG PHE THR SEQRES 23 A 298 ALA VAL PRO LYS ASN HIS GLN ALA VAL ARG ASN PRO HET MN A 401 2 HET U5P A 402 32 HET SO4 A 403 5 HETNAM MN MANGANESE (II) ION HETNAM U5P URIDINE-5'-MONOPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 2 MN MN 2+ FORMUL 3 U5P C9 H13 N2 O9 P FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *327(H2 O) HELIX 1 AA1 ASN A 101 GLN A 112 1 12 HELIX 2 AA2 ILE A 123 ALA A 128 5 6 HELIX 3 AA3 PHE A 129 PHE A 141 1 13 HELIX 4 AA4 GLN A 155 VAL A 159 5 5 HELIX 5 AA5 ARG A 180 ARG A 187 1 8 HELIX 6 AA6 ARG A 187 ARG A 199 1 13 HELIX 7 AA7 ARG A 199 VAL A 204 1 6 HELIX 8 AA8 GLY A 221 LEU A 225 5 5 HELIX 9 AA9 SER A 240 PHE A 244 5 5 HELIX 10 AB1 VAL A 274 ASN A 294 1 21 HELIX 11 AB2 TRP A 300 HIS A 313 1 14 HELIX 12 AB3 PRO A 321 LEU A 324 5 4 HELIX 13 AB4 ASP A 326 GLY A 331 1 6 SHEET 1 AA1 8 ILE A 94 VAL A 95 0 SHEET 2 AA1 8 LYS A 317 LEU A 319 1 O VAL A 318 N VAL A 95 SHEET 3 AA1 8 LEU A 228 THR A 231 1 N GLY A 230 O LEU A 319 SHEET 4 AA1 8 PHE A 269 SER A 273 -1 O GLY A 271 N PHE A 229 SHEET 5 AA1 8 TYR A 206 VAL A 210 -1 N CYS A 209 O PHE A 270 SHEET 6 AA1 8 THR A 115 ALA A 122 1 N GLY A 117 O TYR A 206 SHEET 7 AA1 8 ARG A 146 THR A 153 1 O PHE A 152 N ALA A 122 SHEET 8 AA1 8 ARG A 168 GLU A 174 1 O GLN A 169 N TYR A 149 SHEET 1 AA2 2 MET A 214 PHE A 216 0 SHEET 2 AA2 2 PHE A 341 ALA A 343 -1 O THR A 342 N GLU A 215 LINK OD2 ASP A 211 MN B MN A 401 1555 1555 2.35 LINK OD1 ASP A 213 MN B MN A 401 1555 1555 2.52 LINK OD2 ASP A 213 MN A MN A 401 1555 1555 2.17 LINK MN A MN A 401 O1P U5P A 402 1555 1555 1.99 LINK MN B MN A 401 O1P U5P A 402 1555 1555 2.51 LINK MN A MN A 401 O HOH A 643 1555 1555 2.15 LINK MN A MN A 401 O HOH A 670 1555 1555 2.28 LINK MN A MN A 401 O HOH A 710 1555 1555 2.13 SITE 1 AC1 6 ASP A 211 ASP A 213 U5P A 402 HOH A 643 SITE 2 AC1 6 HOH A 670 HOH A 710 SITE 1 AC2 18 PHE A 121 ALA A 122 ILE A 123 LYS A 124 SITE 2 AC2 18 TYR A 126 VAL A 184 SER A 185 ARG A 188 SITE 3 AC2 18 ASP A 211 VAL A 212 ASP A 213 MN A 401 SITE 4 AC2 18 HOH A 540 HOH A 543 HOH A 612 HOH A 643 SITE 5 AC2 18 HOH A 710 HOH A 737 SITE 1 AC3 6 ASN A 113 ARG A 146 THR A 166 GLY A 167 SITE 2 AC3 6 HOH A 507 HOH A 630 CRYST1 52.853 149.684 79.835 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018920 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006681 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012526 0.00000