HEADER OXIDOREDUCTASE 30-OCT-16 5M8X TITLE PCE REDUCTIVE DEHALOGENASE FROM S. MULTIVORANS IN COMPLEX WITH 2,4,5- TITLE 2 TRICHLOROPHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETRACHLOROETHENE REDUCTIVE DEHALOGENASE CATALYTIC SUBUNIT COMPND 3 PCEA; COMPND 4 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFUROSPIRILLUM MULTIVORANS DSM 12446; SOURCE 3 ORGANISM_TAXID: 1150621 KEYWDS ORGANOHALIDE RESPIRATION ANAEROBIC CRYSTALLISATION COBALAMIN, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.KUNZE,M.BOMMER,W.R.HAGEN,M.UKSA,H.DOBBEK,T.SCHUBERT,G.DIEKERT REVDAT 2 17-JAN-24 5M8X 1 LINK REVDAT 1 12-JUL-17 5M8X 0 JRNL AUTH C.KUNZE,M.BOMMER,W.R.HAGEN,M.UKSA,H.DOBBEK,T.SCHUBERT, JRNL AUTH 2 G.DIEKERT JRNL TITL COBAMIDE-MEDIATED ENZYMATIC REDUCTIVE DEHALOGENATION VIA JRNL TITL 2 LONG-RANGE ELECTRON TRANSFER. JRNL REF NAT COMMUN V. 8 15858 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28671181 JRNL DOI 10.1038/NCOMMS15858 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 78564 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.128 REMARK 3 FREE R VALUE : 0.159 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3287 - 5.8036 1.00 5108 268 0.1408 0.1572 REMARK 3 2 5.8036 - 4.6077 1.00 5090 271 0.1255 0.1554 REMARK 3 3 4.6077 - 4.0256 1.00 5122 269 0.1101 0.1314 REMARK 3 4 4.0256 - 3.6577 1.00 5122 268 0.1136 0.1361 REMARK 3 5 3.6577 - 3.3956 1.00 5143 271 0.1196 0.1502 REMARK 3 6 3.3956 - 3.1955 1.00 5091 270 0.1258 0.1525 REMARK 3 7 3.1955 - 3.0355 1.00 5107 268 0.1293 0.1672 REMARK 3 8 3.0355 - 2.9034 1.00 5120 270 0.1362 0.1710 REMARK 3 9 2.9034 - 2.7916 1.00 5114 268 0.1304 0.1581 REMARK 3 10 2.7916 - 2.6953 1.00 5125 269 0.1288 0.1702 REMARK 3 11 2.6953 - 2.6110 1.00 5087 268 0.1247 0.1420 REMARK 3 12 2.6110 - 2.5364 1.00 5095 267 0.1297 0.1780 REMARK 3 13 2.5364 - 2.4696 1.00 5136 271 0.1253 0.1599 REMARK 3 14 2.4696 - 2.4094 1.00 5167 273 0.1291 0.1634 REMARK 3 15 2.4094 - 2.3546 1.00 5071 266 0.1265 0.1704 REMARK 3 16 2.3546 - 2.3045 1.00 5056 267 0.1215 0.1666 REMARK 3 17 2.3045 - 2.2584 1.00 5142 272 0.1237 0.1508 REMARK 3 18 2.2584 - 2.2158 1.00 5131 267 0.1287 0.1541 REMARK 3 19 2.2158 - 2.1762 1.00 5079 270 0.1279 0.1554 REMARK 3 20 2.1762 - 2.1393 0.99 5066 265 0.1296 0.1663 REMARK 3 21 2.1393 - 2.1048 0.99 5072 269 0.1350 0.2011 REMARK 3 22 2.1048 - 2.0724 1.00 5144 270 0.1379 0.1721 REMARK 3 23 2.0724 - 2.0419 1.00 5053 266 0.1373 0.1690 REMARK 3 24 2.0419 - 2.0132 1.00 5102 270 0.1409 0.1694 REMARK 3 25 2.0132 - 1.9860 0.99 5060 266 0.1458 0.2001 REMARK 3 26 1.9860 - 1.9602 0.92 4729 251 0.1525 0.2054 REMARK 3 27 1.9602 - 1.9357 0.86 4306 227 0.1596 0.1907 REMARK 3 28 1.9357 - 1.9124 0.80 4135 218 0.1717 0.2127 REMARK 3 29 1.9124 - 1.8901 0.74 3735 198 0.1722 0.1773 REMARK 3 30 1.8901 - 1.8689 0.62 3234 168 0.2053 0.2495 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7460 REMARK 3 ANGLE : 0.950 10163 REMARK 3 CHIRALITY : 0.059 1054 REMARK 3 PLANARITY : 0.006 1372 REMARK 3 DIHEDRAL : 14.824 4456 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8602 -18.3986 5.4182 REMARK 3 T TENSOR REMARK 3 T11: 0.2104 T22: 0.2528 REMARK 3 T33: 0.2217 T12: 0.0207 REMARK 3 T13: -0.0233 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 0.1653 L22: 0.3045 REMARK 3 L33: 0.2023 L12: 0.1875 REMARK 3 L13: 0.0413 L23: 0.2822 REMARK 3 S TENSOR REMARK 3 S11: 0.0836 S12: -0.1155 S13: -0.0042 REMARK 3 S21: 0.0323 S22: 0.0231 S23: 0.0798 REMARK 3 S31: -0.0239 S32: -0.1630 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0617 -23.9532 -16.1969 REMARK 3 T TENSOR REMARK 3 T11: 0.1821 T22: 0.1533 REMARK 3 T33: 0.1666 T12: -0.0077 REMARK 3 T13: -0.0285 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.0992 L22: 0.5538 REMARK 3 L33: 0.6165 L12: -0.0032 REMARK 3 L13: 0.1518 L23: 0.2792 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: 0.0160 S13: 0.0136 REMARK 3 S21: -0.0875 S22: -0.0061 S23: 0.0326 REMARK 3 S31: -0.0851 S32: -0.0705 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1569 -23.1462 -23.9062 REMARK 3 T TENSOR REMARK 3 T11: 0.2692 T22: 0.3167 REMARK 3 T33: 0.2672 T12: 0.0120 REMARK 3 T13: -0.0904 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 0.0757 L22: 0.1549 REMARK 3 L33: 0.0566 L12: -0.0605 REMARK 3 L13: 0.0672 L23: 0.0104 REMARK 3 S TENSOR REMARK 3 S11: 0.0124 S12: 0.0966 S13: -0.0005 REMARK 3 S21: -0.2800 S22: -0.1028 S23: 0.1696 REMARK 3 S31: -0.0769 S32: -0.2201 S33: -0.0047 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7435 -22.8439 -4.4123 REMARK 3 T TENSOR REMARK 3 T11: 0.1609 T22: 0.1614 REMARK 3 T33: 0.1524 T12: -0.0035 REMARK 3 T13: -0.0305 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.1599 L22: 0.4555 REMARK 3 L33: 0.6261 L12: -0.0470 REMARK 3 L13: -0.0043 L23: 0.0832 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: -0.0507 S13: 0.0137 REMARK 3 S21: 0.0253 S22: -0.0178 S23: 0.0095 REMARK 3 S31: -0.0721 S32: -0.0838 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 379 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6996 -3.8464 -7.0642 REMARK 3 T TENSOR REMARK 3 T11: 0.3257 T22: 0.1667 REMARK 3 T33: 0.2139 T12: 0.0315 REMARK 3 T13: -0.0379 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.0307 L22: 0.0469 REMARK 3 L33: 0.0630 L12: 0.0323 REMARK 3 L13: 0.0428 L23: 0.0653 REMARK 3 S TENSOR REMARK 3 S11: 0.0575 S12: 0.0272 S13: 0.1361 REMARK 3 S21: -0.0746 S22: -0.0291 S23: 0.0638 REMARK 3 S31: -0.4342 S32: -0.1242 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 380 THROUGH 431 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6585 -14.2431 7.5354 REMARK 3 T TENSOR REMARK 3 T11: 0.2375 T22: 0.2379 REMARK 3 T33: 0.1890 T12: -0.0324 REMARK 3 T13: -0.0334 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.0718 L22: 0.0208 REMARK 3 L33: 0.0353 L12: 0.0663 REMARK 3 L13: -0.0602 L23: 0.0156 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.1648 S13: 0.0442 REMARK 3 S21: 0.0397 S22: -0.0331 S23: 0.0283 REMARK 3 S31: -0.2509 S32: 0.3526 S33: -0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 432 THROUGH 462 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9091 -30.4905 0.3342 REMARK 3 T TENSOR REMARK 3 T11: 0.2035 T22: 0.1836 REMARK 3 T33: 0.2086 T12: -0.0449 REMARK 3 T13: -0.0273 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 0.0385 L22: 0.0496 REMARK 3 L33: 0.0600 L12: 0.1297 REMARK 3 L13: 0.0603 L23: 0.0740 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: -0.2853 S13: 0.1128 REMARK 3 S21: 0.2550 S22: 0.0153 S23: -0.0710 REMARK 3 S31: 0.0457 S32: 0.2530 S33: 0.0085 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9959 -56.2669 -19.3891 REMARK 3 T TENSOR REMARK 3 T11: 0.2906 T22: 0.2316 REMARK 3 T33: 0.2973 T12: 0.0335 REMARK 3 T13: -0.0373 T23: -0.0660 REMARK 3 L TENSOR REMARK 3 L11: 0.0067 L22: 0.3876 REMARK 3 L33: 0.4700 L12: -0.0395 REMARK 3 L13: -0.0170 L23: -0.1005 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: -0.0869 S13: -0.0797 REMARK 3 S21: 0.0434 S22: 0.0289 S23: -0.2328 REMARK 3 S31: 0.3502 S32: 0.1319 S33: 0.0150 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9039 -54.6668 -8.9429 REMARK 3 T TENSOR REMARK 3 T11: 0.3000 T22: 0.1724 REMARK 3 T33: 0.1651 T12: -0.0944 REMARK 3 T13: -0.0392 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.1846 L22: 0.2033 REMARK 3 L33: 0.0477 L12: -0.0707 REMARK 3 L13: -0.0816 L23: 0.1178 REMARK 3 S TENSOR REMARK 3 S11: 0.0499 S12: -0.0458 S13: 0.0095 REMARK 3 S21: 0.1002 S22: -0.0631 S23: 0.0171 REMARK 3 S31: 0.2091 S32: -0.0717 S33: -0.0124 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4767 -35.6360 -25.0435 REMARK 3 T TENSOR REMARK 3 T11: 0.2020 T22: 0.1704 REMARK 3 T33: 0.2162 T12: -0.0237 REMARK 3 T13: -0.0064 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 0.0350 L22: 0.1258 REMARK 3 L33: 0.3954 L12: 0.0006 REMARK 3 L13: -0.0391 L23: 0.1977 REMARK 3 S TENSOR REMARK 3 S11: -0.0013 S12: 0.0599 S13: -0.0455 REMARK 3 S21: -0.1033 S22: 0.0899 S23: -0.1435 REMARK 3 S31: -0.0176 S32: 0.0362 S33: 0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 177 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7129 -45.8512 -27.4321 REMARK 3 T TENSOR REMARK 3 T11: 0.2154 T22: 0.1696 REMARK 3 T33: 0.1693 T12: -0.0409 REMARK 3 T13: -0.0128 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 0.1607 L22: 0.5351 REMARK 3 L33: 0.2226 L12: -0.0401 REMARK 3 L13: 0.0106 L23: 0.3142 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: 0.0603 S13: -0.0734 REMARK 3 S21: -0.0670 S22: 0.0931 S23: -0.1311 REMARK 3 S31: 0.0817 S32: 0.0134 S33: 0.0002 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 236 THROUGH 379 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9809 -51.5906 -15.2966 REMARK 3 T TENSOR REMARK 3 T11: 0.2310 T22: 0.1279 REMARK 3 T33: 0.2372 T12: 0.0374 REMARK 3 T13: -0.0697 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 0.4334 L22: 0.5461 REMARK 3 L33: 0.7111 L12: 0.1717 REMARK 3 L13: 0.2094 L23: 0.4205 REMARK 3 S TENSOR REMARK 3 S11: 0.0664 S12: 0.0181 S13: -0.0778 REMARK 3 S21: 0.0999 S22: 0.0832 S23: -0.1784 REMARK 3 S31: 0.1921 S32: 0.1031 S33: 0.1755 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 380 THROUGH 461 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7021 -43.7675 -1.5218 REMARK 3 T TENSOR REMARK 3 T11: 0.2495 T22: 0.1522 REMARK 3 T33: 0.1943 T12: -0.0090 REMARK 3 T13: -0.0815 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.0471 L22: 0.1588 REMARK 3 L33: 0.2664 L12: 0.0276 REMARK 3 L13: 0.1421 L23: 0.2097 REMARK 3 S TENSOR REMARK 3 S11: 0.1037 S12: -0.0412 S13: -0.0175 REMARK 3 S21: 0.2573 S22: 0.0064 S23: -0.1048 REMARK 3 S31: 0.1672 S32: 0.0703 S33: 0.0084 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5M8X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200002100. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.9 REMARK 200 MONOCHROMATOR : SI-111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOVEMBER 3, 2014 REMARK 200 DATA SCALING SOFTWARE : XDS NOVEMBER 3, 2014 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78564 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.869 REMARK 200 RESOLUTION RANGE LOW (A) : 47.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.05844 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.28850 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4UQU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 PERCENT PEG 3350, 200 MM SODIUM REMARK 280 MALONATE, 2 PERCENT BENZAMIDINEHCL, AND 50 MM TRISHCL, PH 7.5 REMARK 280 UNDER AN ATMOSPHERE OF 95 PERCENT N2, 5 PERCENT H2 AND LESS THAN REMARK 280 10 PPM OXYGEN, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.50500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.25250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.75750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -180.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 418 REMARK 465 GLY A 419 REMARK 465 MET A 420 REMARK 465 ASP A 421 REMARK 465 ASP A 422 REMARK 465 ALA A 423 REMARK 465 LEU A 424 REMARK 465 GLY A 425 REMARK 465 TYR A 426 REMARK 465 GLY A 427 REMARK 465 ALA A 428 REMARK 465 LYS A 429 REMARK 465 ARG A 430 REMARK 465 LYS A 463 REMARK 465 SER A 464 REMARK 465 ALA B 1 REMARK 465 GLU B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 395 REMARK 465 ASN B 396 REMARK 465 ILE B 397 REMARK 465 TRP B 398 REMARK 465 ILE B 399 REMARK 465 HIS B 400 REMARK 465 ASP B 401 REMARK 465 GLY B 402 REMARK 465 VAL B 403 REMARK 465 GLU B 404 REMARK 465 TRP B 405 REMARK 465 LEU B 406 REMARK 465 ILE B 407 REMARK 465 ASP B 408 REMARK 465 ASN B 409 REMARK 465 THR B 410 REMARK 465 ARG B 411 REMARK 465 PHE B 412 REMARK 465 LEU B 413 REMARK 465 ASP B 414 REMARK 465 PRO B 415 REMARK 465 LEU B 416 REMARK 465 MET B 417 REMARK 465 LEU B 418 REMARK 465 GLY B 419 REMARK 465 MET B 420 REMARK 465 ASP B 421 REMARK 465 ASP B 422 REMARK 465 ALA B 423 REMARK 465 LEU B 424 REMARK 465 GLY B 425 REMARK 465 TYR B 426 REMARK 465 GLY B 427 REMARK 465 ALA B 428 REMARK 465 LYS B 429 REMARK 465 ARG B 430 REMARK 465 LYS B 462 REMARK 465 LYS B 463 REMARK 465 SER B 464 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 76 O HOH B 601 2.11 REMARK 500 OE1 GLU A 330 O HOH A 601 2.15 REMARK 500 O HOH A 621 O HOH A 976 2.16 REMARK 500 NH1 ARG A 337 O HOH A 602 2.16 REMARK 500 O HOH A 655 O HOH A 942 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 956 O HOH B 908 3455 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 81 -179.95 -170.23 REMARK 500 TYR A 102 67.71 61.00 REMARK 500 PHE A 110 -110.73 53.94 REMARK 500 MET A 112 44.37 -92.78 REMARK 500 SER A 270 -34.21 -155.47 REMARK 500 CYS A 271 -120.88 48.15 REMARK 500 VAL A 274 -47.37 72.81 REMARK 500 CYS A 383 -110.76 46.67 REMARK 500 TYR A 443 19.16 59.59 REMARK 500 TYR B 102 68.32 64.04 REMARK 500 PHE B 110 -112.76 53.23 REMARK 500 MET B 112 43.49 -96.06 REMARK 500 SER B 270 -33.07 -154.64 REMARK 500 CYS B 271 -121.32 46.49 REMARK 500 VAL B 274 -48.48 74.13 REMARK 500 CYS B 383 -113.34 46.08 REMARK 500 TYR B 443 19.08 58.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 395 ASN A 396 -147.16 REMARK 500 ASN A 396 ILE A 397 -144.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 937 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH B 938 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH B 939 DISTANCE = 7.35 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 329 SG REMARK 620 2 SF4 A 501 S1 118.5 REMARK 620 3 SF4 A 501 S3 114.4 103.5 REMARK 620 4 SF4 A 501 S4 109.3 104.0 106.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 501 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 332 SG REMARK 620 2 SF4 A 501 S1 110.6 REMARK 620 3 SF4 A 501 S2 114.5 104.9 REMARK 620 4 SF4 A 501 S3 116.5 104.3 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 501 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 335 SG REMARK 620 2 SF4 A 501 S1 113.5 REMARK 620 3 SF4 A 501 S2 110.8 104.9 REMARK 620 4 SF4 A 501 S4 116.1 105.5 105.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 339 SG REMARK 620 2 SF4 A 502 S1 117.9 REMARK 620 3 SF4 A 502 S2 107.9 105.3 REMARK 620 4 SF4 A 502 S4 114.7 104.4 105.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 372 SG REMARK 620 2 SF4 A 502 S1 114.4 REMARK 620 3 SF4 A 502 S2 113.8 105.5 REMARK 620 4 SF4 A 502 S3 110.2 105.5 106.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 383 SG REMARK 620 2 SF4 A 502 S2 117.0 REMARK 620 3 SF4 A 502 S3 107.6 105.1 REMARK 620 4 SF4 A 502 S4 115.0 104.9 106.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 386 SG REMARK 620 2 SF4 A 502 S1 124.5 REMARK 620 3 SF4 A 502 S3 109.1 104.1 REMARK 620 4 SF4 A 502 S4 108.7 102.9 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 390 SG REMARK 620 2 SF4 A 501 S2 114.3 REMARK 620 3 SF4 A 501 S3 107.8 103.8 REMARK 620 4 SF4 A 501 S4 120.3 103.3 105.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BVQ A 503 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 604 O REMARK 620 2 BVQ A 503 N21 93.6 REMARK 620 3 BVQ A 503 N22 87.0 89.4 REMARK 620 4 BVQ A 503 N23 100.2 165.3 96.3 REMARK 620 5 BVQ A 503 N24 93.3 83.9 173.2 90.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 329 SG REMARK 620 2 SF4 B 501 S1 116.8 REMARK 620 3 SF4 B 501 S3 111.4 104.6 REMARK 620 4 SF4 B 501 S4 110.5 105.7 107.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 332 SG REMARK 620 2 SF4 B 501 S1 110.2 REMARK 620 3 SF4 B 501 S2 115.8 105.0 REMARK 620 4 SF4 B 501 S3 115.4 104.9 104.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 335 SG REMARK 620 2 SF4 B 501 S1 113.3 REMARK 620 3 SF4 B 501 S2 110.9 105.0 REMARK 620 4 SF4 B 501 S4 116.2 106.7 103.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 339 SG REMARK 620 2 SF4 B 502 S1 118.8 REMARK 620 3 SF4 B 502 S2 108.4 105.9 REMARK 620 4 SF4 B 502 S3 113.3 103.4 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 372 SG REMARK 620 2 SF4 B 502 S1 114.2 REMARK 620 3 SF4 B 502 S2 113.7 105.8 REMARK 620 4 SF4 B 502 S4 110.2 105.3 107.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 383 SG REMARK 620 2 SF4 B 502 S2 116.2 REMARK 620 3 SF4 B 502 S3 116.6 104.4 REMARK 620 4 SF4 B 502 S4 107.4 105.1 106.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 386 SG REMARK 620 2 SF4 B 502 S1 124.1 REMARK 620 3 SF4 B 502 S3 108.5 102.3 REMARK 620 4 SF4 B 502 S4 109.2 103.5 108.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 390 SG REMARK 620 2 SF4 B 501 S2 115.1 REMARK 620 3 SF4 B 501 S3 108.3 103.8 REMARK 620 4 SF4 B 501 S4 118.6 103.4 106.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BVQ B 503 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 606 O REMARK 620 2 BVQ B 503 N21 94.0 REMARK 620 3 BVQ B 503 N22 88.2 88.7 REMARK 620 4 BVQ B 503 N23 102.5 162.7 96.6 REMARK 620 5 BVQ B 503 N24 95.6 83.5 171.5 89.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVQ A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TC7 A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVQ B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TC7 B 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M2G RELATED DB: PDB REMARK 900 5M2G CONTAINS THE SAME PROTEIN COMPLEXED WITH 2,4,6-TRIBROMOPHENOL DBREF 5M8X A 1 464 UNP W6EQP0 W6EQP0_SULMU 38 501 DBREF 5M8X B 1 464 UNP W6EQP0 W6EQP0_SULMU 38 501 SEQRES 1 A 464 ALA GLU LYS GLU LYS ASN ALA ALA GLU ILE ARG GLN GLN SEQRES 2 A 464 PHE ALA MET THR ALA GLY SER PRO ILE ILE VAL ASN ASP SEQRES 3 A 464 LYS LEU GLU ARG TYR ALA GLU VAL ARG THR ALA PHE THR SEQRES 4 A 464 HIS PRO THR SER PHE PHE LYS PRO ASN TYR LYS GLY GLU SEQRES 5 A 464 VAL LYS PRO TRP PHE LEU SER ALA TYR ASP GLU LYS VAL SEQRES 6 A 464 ARG GLN ILE GLU ASN GLY GLU ASN GLY PRO LYS MET LYS SEQRES 7 A 464 ALA LYS ASN VAL GLY GLU ALA ARG ALA GLY ARG ALA LEU SEQRES 8 A 464 GLU ALA ALA GLY TRP THR LEU ASP ILE ASN TYR GLY ASN SEQRES 9 A 464 ILE TYR PRO ASN ARG PHE PHE MET LEU TRP SER GLY GLU SEQRES 10 A 464 THR MET THR ASN THR GLN LEU TRP ALA PRO VAL GLY LEU SEQRES 11 A 464 ASP ARG ARG PRO PRO ASP THR THR ASP PRO VAL GLU LEU SEQRES 12 A 464 THR ASN TYR VAL LYS PHE ALA ALA ARG MET ALA GLY ALA SEQRES 13 A 464 ASP LEU VAL GLY VAL ALA ARG LEU ASN ARG ASN TRP VAL SEQRES 14 A 464 TYR SER GLU ALA VAL THR ILE PRO ALA ASP VAL PRO TYR SEQRES 15 A 464 GLU GLN SER LEU HIS LYS GLU ILE GLU LYS PRO ILE VAL SEQRES 16 A 464 PHE LYS ASP VAL PRO LEU PRO ILE GLU THR ASP ASP GLU SEQRES 17 A 464 LEU ILE ILE PRO ASN THR CYS GLU ASN VAL ILE VAL ALA SEQRES 18 A 464 GLY ILE ALA MET ASN ARG GLU MET MET GLN THR ALA PRO SEQRES 19 A 464 ASN SER MET ALA CYS ALA THR THR ALA PHE CYS TYR SER SEQRES 20 A 464 ARG MET CYS MET PHE ASP MET TRP LEU CYS GLN PHE ILE SEQRES 21 A 464 ARG TYR MET GLY TYR TYR ALA ILE PRO SER CYS ASN GLY SEQRES 22 A 464 VAL GLY GLN SER VAL ALA PHE ALA VAL GLU ALA GLY LEU SEQRES 23 A 464 GLY GLN ALA SER ARG MET GLY ALA CYS ILE THR PRO GLU SEQRES 24 A 464 PHE GLY PRO ASN VAL ARG LEU THR LYS VAL PHE THR ASN SEQRES 25 A 464 MET PRO LEU VAL PRO ASP LYS PRO ILE ASP PHE GLY VAL SEQRES 26 A 464 THR GLU PHE CYS GLU THR CYS LYS LYS CYS ALA ARG GLU SEQRES 27 A 464 CYS PRO SER LYS ALA ILE THR GLU GLY PRO ARG THR PHE SEQRES 28 A 464 GLU GLY ARG SER ILE HIS ASN GLN SER GLY LYS LEU GLN SEQRES 29 A 464 TRP GLN ASN ASP TYR ASN LYS CYS LEU GLY TYR TRP PRO SEQRES 30 A 464 GLU SER GLY GLY TYR CYS GLY VAL CYS VAL ALA VAL CYS SEQRES 31 A 464 PRO PHE THR LYS GLY ASN ILE TRP ILE HIS ASP GLY VAL SEQRES 32 A 464 GLU TRP LEU ILE ASP ASN THR ARG PHE LEU ASP PRO LEU SEQRES 33 A 464 MET LEU GLY MET ASP ASP ALA LEU GLY TYR GLY ALA LYS SEQRES 34 A 464 ARG ASN ILE THR GLU VAL TRP ASP GLY LYS ILE ASN THR SEQRES 35 A 464 TYR GLY LEU ASP ALA ASP HIS PHE ARG ASP THR VAL SER SEQRES 36 A 464 PHE ARG LYS ASP ARG VAL LYS LYS SER SEQRES 1 B 464 ALA GLU LYS GLU LYS ASN ALA ALA GLU ILE ARG GLN GLN SEQRES 2 B 464 PHE ALA MET THR ALA GLY SER PRO ILE ILE VAL ASN ASP SEQRES 3 B 464 LYS LEU GLU ARG TYR ALA GLU VAL ARG THR ALA PHE THR SEQRES 4 B 464 HIS PRO THR SER PHE PHE LYS PRO ASN TYR LYS GLY GLU SEQRES 5 B 464 VAL LYS PRO TRP PHE LEU SER ALA TYR ASP GLU LYS VAL SEQRES 6 B 464 ARG GLN ILE GLU ASN GLY GLU ASN GLY PRO LYS MET LYS SEQRES 7 B 464 ALA LYS ASN VAL GLY GLU ALA ARG ALA GLY ARG ALA LEU SEQRES 8 B 464 GLU ALA ALA GLY TRP THR LEU ASP ILE ASN TYR GLY ASN SEQRES 9 B 464 ILE TYR PRO ASN ARG PHE PHE MET LEU TRP SER GLY GLU SEQRES 10 B 464 THR MET THR ASN THR GLN LEU TRP ALA PRO VAL GLY LEU SEQRES 11 B 464 ASP ARG ARG PRO PRO ASP THR THR ASP PRO VAL GLU LEU SEQRES 12 B 464 THR ASN TYR VAL LYS PHE ALA ALA ARG MET ALA GLY ALA SEQRES 13 B 464 ASP LEU VAL GLY VAL ALA ARG LEU ASN ARG ASN TRP VAL SEQRES 14 B 464 TYR SER GLU ALA VAL THR ILE PRO ALA ASP VAL PRO TYR SEQRES 15 B 464 GLU GLN SER LEU HIS LYS GLU ILE GLU LYS PRO ILE VAL SEQRES 16 B 464 PHE LYS ASP VAL PRO LEU PRO ILE GLU THR ASP ASP GLU SEQRES 17 B 464 LEU ILE ILE PRO ASN THR CYS GLU ASN VAL ILE VAL ALA SEQRES 18 B 464 GLY ILE ALA MET ASN ARG GLU MET MET GLN THR ALA PRO SEQRES 19 B 464 ASN SER MET ALA CYS ALA THR THR ALA PHE CYS TYR SER SEQRES 20 B 464 ARG MET CYS MET PHE ASP MET TRP LEU CYS GLN PHE ILE SEQRES 21 B 464 ARG TYR MET GLY TYR TYR ALA ILE PRO SER CYS ASN GLY SEQRES 22 B 464 VAL GLY GLN SER VAL ALA PHE ALA VAL GLU ALA GLY LEU SEQRES 23 B 464 GLY GLN ALA SER ARG MET GLY ALA CYS ILE THR PRO GLU SEQRES 24 B 464 PHE GLY PRO ASN VAL ARG LEU THR LYS VAL PHE THR ASN SEQRES 25 B 464 MET PRO LEU VAL PRO ASP LYS PRO ILE ASP PHE GLY VAL SEQRES 26 B 464 THR GLU PHE CYS GLU THR CYS LYS LYS CYS ALA ARG GLU SEQRES 27 B 464 CYS PRO SER LYS ALA ILE THR GLU GLY PRO ARG THR PHE SEQRES 28 B 464 GLU GLY ARG SER ILE HIS ASN GLN SER GLY LYS LEU GLN SEQRES 29 B 464 TRP GLN ASN ASP TYR ASN LYS CYS LEU GLY TYR TRP PRO SEQRES 30 B 464 GLU SER GLY GLY TYR CYS GLY VAL CYS VAL ALA VAL CYS SEQRES 31 B 464 PRO PHE THR LYS GLY ASN ILE TRP ILE HIS ASP GLY VAL SEQRES 32 B 464 GLU TRP LEU ILE ASP ASN THR ARG PHE LEU ASP PRO LEU SEQRES 33 B 464 MET LEU GLY MET ASP ASP ALA LEU GLY TYR GLY ALA LYS SEQRES 34 B 464 ARG ASN ILE THR GLU VAL TRP ASP GLY LYS ILE ASN THR SEQRES 35 B 464 TYR GLY LEU ASP ALA ASP HIS PHE ARG ASP THR VAL SER SEQRES 36 B 464 PHE ARG LYS ASP ARG VAL LYS LYS SER HET SF4 A 501 8 HET SF4 A 502 8 HET BVQ A 503 89 HET BEN A 504 9 HET GOL A 505 6 HET GOL A 506 6 HET GOL A 507 6 HET GOL A 508 6 HET GOL A 509 6 HET GOL A 510 6 HET GOL A 511 6 HET GOL A 512 6 HET TC7 A 513 10 HET SF4 B 501 8 HET SF4 B 502 8 HET BVQ B 503 89 HET GOL B 504 6 HET TC7 B 505 10 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM BVQ NORPSEUDO-B12 HETNAM BEN BENZAMIDINE HETNAM GOL GLYCEROL HETNAM TC7 2,4,5-TRICHLOROPHENOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SF4 4(FE4 S4) FORMUL 5 BVQ 2(C57 H82 CO N16 O14 P 5+) FORMUL 6 BEN C7 H8 N2 FORMUL 7 GOL 9(C3 H8 O3) FORMUL 15 TC7 2(C6 H3 CL3 O) FORMUL 21 HOH *732(H2 O) HELIX 1 AA1 ASN A 6 ALA A 15 1 10 HELIX 2 AA2 ALA A 32 THR A 36 5 5 HELIX 3 AA3 HIS A 40 PHE A 44 1 5 HELIX 4 AA4 TRP A 56 ASN A 70 1 15 HELIX 5 AA5 ASN A 81 TRP A 96 1 16 HELIX 6 AA6 THR A 97 ASP A 99 5 3 HELIX 7 AA7 MET A 119 ALA A 126 1 8 HELIX 8 AA8 PRO A 127 GLY A 129 5 3 HELIX 9 AA9 ASP A 139 ALA A 154 1 16 HELIX 10 AB1 ASN A 165 VAL A 169 5 5 HELIX 11 AB2 PRO A 181 LYS A 188 5 8 HELIX 12 AB3 ASN A 226 GLN A 231 1 6 HELIX 13 AB4 ASN A 235 MET A 263 1 29 HELIX 14 AB5 GLN A 276 ALA A 284 1 9 HELIX 15 AB6 GLY A 324 LYS A 333 1 10 HELIX 16 AB7 LYS A 333 CYS A 339 1 7 HELIX 17 AB8 ASP A 368 GLY A 380 1 13 HELIX 18 AB9 GLY A 384 CYS A 390 1 7 HELIX 19 AC1 PRO A 391 LYS A 394 5 4 HELIX 20 AC2 ASN A 409 LEU A 413 5 5 HELIX 21 AC3 ILE A 432 ASP A 437 1 6 HELIX 22 AC4 ASN A 441 LEU A 445 5 5 HELIX 23 AC5 HIS A 449 VAL A 454 5 6 HELIX 24 AC6 PHE A 456 VAL A 461 1 6 HELIX 25 AC7 ALA B 7 PHE B 14 1 8 HELIX 26 AC8 ALA B 32 THR B 36 5 5 HELIX 27 AC9 HIS B 40 PHE B 44 1 5 HELIX 28 AD1 TRP B 56 ASN B 70 1 15 HELIX 29 AD2 ASN B 81 TRP B 96 1 16 HELIX 30 AD3 THR B 97 ASP B 99 5 3 HELIX 31 AD4 MET B 119 ALA B 126 1 8 HELIX 32 AD5 PRO B 127 GLY B 129 5 3 HELIX 33 AD6 ASP B 139 ALA B 154 1 16 HELIX 34 AD7 ASN B 165 VAL B 169 5 5 HELIX 35 AD8 PRO B 181 LYS B 188 5 8 HELIX 36 AD9 ASN B 226 GLN B 231 1 6 HELIX 37 AE1 ASN B 235 MET B 263 1 29 HELIX 38 AE2 GLN B 276 ALA B 284 1 9 HELIX 39 AE3 GLY B 324 LYS B 333 1 10 HELIX 40 AE4 LYS B 333 CYS B 339 1 7 HELIX 41 AE5 ASP B 368 GLY B 380 1 13 HELIX 42 AE6 GLY B 384 CYS B 390 1 7 HELIX 43 AE7 PRO B 391 LYS B 394 5 4 HELIX 44 AE8 ILE B 432 ASP B 437 1 6 HELIX 45 AE9 ASN B 441 LEU B 445 5 5 HELIX 46 AF1 HIS B 449 VAL B 454 5 6 HELIX 47 AF2 PHE B 456 VAL B 461 1 6 SHEET 1 AA1 2 PHE A 45 PRO A 47 0 SHEET 2 AA1 2 VAL A 53 PRO A 55 -1 O LYS A 54 N LYS A 46 SHEET 1 AA2 2 GLU A 72 GLY A 74 0 SHEET 2 AA2 2 MET A 77 LYS A 78 -1 O MET A 77 N ASN A 73 SHEET 1 AA3 4 LEU A 158 ARG A 163 0 SHEET 2 AA3 4 ASN A 217 ALA A 224 -1 O VAL A 220 N GLY A 160 SHEET 3 AA3 4 VAL A 304 THR A 311 -1 O ARG A 305 N ILE A 223 SHEET 4 AA3 4 ALA A 267 ILE A 268 -1 N ILE A 268 O PHE A 310 SHEET 1 AA4 4 GLU A 172 THR A 175 0 SHEET 2 AA4 4 ILE A 190 LYS A 197 -1 O LYS A 192 N ALA A 173 SHEET 3 AA4 4 LEU A 209 PRO A 212 1 O ILE A 211 N VAL A 195 SHEET 4 AA4 4 ILE A 203 GLU A 204 -1 N ILE A 203 O ILE A 210 SHEET 1 AA5 2 GLN A 288 ALA A 289 0 SHEET 2 AA5 2 CYS A 295 ILE A 296 -1 O ILE A 296 N GLN A 288 SHEET 1 AA6 2 TRP A 398 HIS A 400 0 SHEET 2 AA6 2 TRP A 405 ILE A 407 -1 O LEU A 406 N ILE A 399 SHEET 1 AA7 2 PHE B 45 PRO B 47 0 SHEET 2 AA7 2 VAL B 53 PRO B 55 -1 O LYS B 54 N LYS B 46 SHEET 1 AA8 2 GLU B 72 GLY B 74 0 SHEET 2 AA8 2 MET B 77 LYS B 78 -1 O MET B 77 N ASN B 73 SHEET 1 AA9 4 LEU B 158 ARG B 163 0 SHEET 2 AA9 4 ASN B 217 ALA B 224 -1 O VAL B 220 N GLY B 160 SHEET 3 AA9 4 VAL B 304 THR B 311 -1 O ARG B 305 N ILE B 223 SHEET 4 AA9 4 ALA B 267 ILE B 268 -1 N ILE B 268 O PHE B 310 SHEET 1 AB1 4 GLU B 172 THR B 175 0 SHEET 2 AB1 4 ILE B 190 LYS B 197 -1 O LYS B 192 N ALA B 173 SHEET 3 AB1 4 LEU B 209 PRO B 212 1 O ILE B 211 N VAL B 195 SHEET 4 AB1 4 ILE B 203 GLU B 204 -1 N ILE B 203 O ILE B 210 SHEET 1 AB2 2 GLN B 288 ALA B 289 0 SHEET 2 AB2 2 CYS B 295 ILE B 296 -1 O ILE B 296 N GLN B 288 LINK SG CYS A 329 FE2 SF4 A 501 1555 1555 2.26 LINK SG CYS A 332 FE4 SF4 A 501 1555 1555 2.33 LINK SG CYS A 335 FE3 SF4 A 501 1555 1555 2.30 LINK SG CYS A 339 FE3 SF4 A 502 1555 1555 2.30 LINK SG CYS A 372 FE4 SF4 A 502 1555 1555 2.28 LINK SG CYS A 383 FE1 SF4 A 502 1555 1555 2.23 LINK SG CYS A 386 FE2 SF4 A 502 1555 1555 2.30 LINK SG CYS A 390 FE1 SF4 A 501 1555 1555 2.35 LINK CO BVQ A 503 O HOH A 604 1555 1555 2.61 LINK SG CYS B 329 FE2 SF4 B 501 1555 1555 2.18 LINK SG CYS B 332 FE4 SF4 B 501 1555 1555 2.33 LINK SG CYS B 335 FE3 SF4 B 501 1555 1555 2.30 LINK SG CYS B 339 FE4 SF4 B 502 1555 1555 2.33 LINK SG CYS B 372 FE3 SF4 B 502 1555 1555 2.26 LINK SG CYS B 383 FE1 SF4 B 502 1555 1555 2.18 LINK SG CYS B 386 FE2 SF4 B 502 1555 1555 2.35 LINK SG CYS B 390 FE1 SF4 B 501 1555 1555 2.34 LINK CO BVQ B 503 O HOH B 606 1555 1555 2.69 CISPEP 1 ALA A 233 PRO A 234 0 4.70 CISPEP 2 ASP A 414 PRO A 415 0 11.18 CISPEP 3 ALA B 233 PRO B 234 0 6.96 SITE 1 AC1 7 ARG A 291 MET A 292 CYS A 329 CYS A 332 SITE 2 AC1 7 LYS A 333 CYS A 335 CYS A 390 SITE 1 AC2 9 CYS A 339 PRO A 340 SER A 341 ILE A 344 SITE 2 AC2 9 CYS A 372 CYS A 383 GLY A 384 CYS A 386 SITE 3 AC2 9 BVQ A 503 SITE 1 AC3 39 TYR A 31 THR A 36 ALA A 37 PHE A 38 SITE 2 AC3 39 TYR A 170 THR A 242 TYR A 246 MET A 249 SITE 3 AC3 39 ASN A 272 GLY A 275 GLN A 276 SER A 277 SITE 4 AC3 39 VAL A 278 ALA A 289 MET A 292 GLY A 293 SITE 5 AC3 39 ALA A 294 CYS A 295 PRO A 302 VAL A 304 SITE 6 AC3 39 ARG A 305 LEU A 306 LYS A 308 HIS A 357 SITE 7 AC3 39 ASN A 358 GLN A 359 LYS A 362 GLN A 364 SITE 8 AC3 39 TYR A 369 CYS A 372 TRP A 376 TYR A 382 SITE 9 AC3 39 VAL A 387 SF4 A 502 HOH A 604 HOH A 673 SITE 10 AC3 39 HOH A 694 HOH A 726 HOH A 804 SITE 1 AC4 4 THR A 39 PHE A 44 GLU A 189 ILE A 399 SITE 1 AC5 5 PHE A 38 PHE A 44 GLU A 189 TC7 A 513 SITE 2 AC5 5 HOH A 788 SITE 1 AC6 9 PHE A 110 LEU A 113 MET A 119 HOH A 664 SITE 2 AC6 9 HOH A 691 HOH A 716 HOH A 740 HOH A 844 SITE 3 AC6 9 PHE B 111 SITE 1 AC7 6 GLU A 330 PRO A 348 ARG A 349 HOH A 646 SITE 2 AC7 6 HOH A 712 HOH A 824 SITE 1 AC8 5 ARG A 349 HOH A 682 HOH A 711 GLU B 172 SITE 2 AC8 5 GLU B 191 SITE 1 AC9 4 ASP A 322 GLY A 324 HOH A 675 HOH A 727 SITE 1 AD1 4 ARG A 354 ASP A 368 LYS A 371 GLU B 378 SITE 1 AD2 7 ALA A 1 GLU A 191 HIS A 400 ASP A 401 SITE 2 AD2 7 GLY A 402 HOH A 612 HOH A 645 SITE 1 AD3 9 PHE A 111 HOH A 635 HOH A 717 HOH A 877 SITE 2 AD3 9 PHE B 110 LEU B 113 MET B 119 HOH B 631 SITE 3 AD3 9 HOH B 641 SITE 1 AD4 9 PHE A 38 TRP A 56 TYR A 102 THR A 242 SITE 2 AD4 9 TYR A 246 ASN A 272 TRP A 376 GOL A 505 SITE 3 AD4 9 HOH A 604 SITE 1 AD5 9 ARG B 291 MET B 292 PHE B 328 CYS B 329 SITE 2 AD5 9 CYS B 332 LYS B 333 CYS B 335 CYS B 390 SITE 3 AD5 9 PHE B 392 SITE 1 AD6 9 CYS B 339 PRO B 340 SER B 341 ILE B 344 SITE 2 AD6 9 CYS B 372 CYS B 383 GLY B 384 CYS B 386 SITE 3 AD6 9 BVQ B 503 SITE 1 AD7 39 TYR B 31 THR B 36 ALA B 37 PHE B 38 SITE 2 AD7 39 TYR B 170 THR B 242 TYR B 246 MET B 249 SITE 3 AD7 39 ASN B 272 GLY B 275 GLN B 276 SER B 277 SITE 4 AD7 39 VAL B 278 ALA B 289 MET B 292 GLY B 293 SITE 5 AD7 39 ALA B 294 CYS B 295 PRO B 302 VAL B 304 SITE 6 AD7 39 ARG B 305 LEU B 306 LYS B 308 HIS B 357 SITE 7 AD7 39 ASN B 358 GLN B 359 LYS B 362 GLN B 364 SITE 8 AD7 39 TYR B 369 CYS B 372 TRP B 376 TYR B 382 SITE 9 AD7 39 SF4 B 502 HOH B 606 HOH B 607 HOH B 662 SITE 10 AD7 39 HOH B 677 HOH B 712 HOH B 798 SITE 1 AD8 6 PHE B 38 LEU B 186 GLU B 189 TC7 B 505 SITE 2 AD8 6 HOH B 603 HOH B 676 SITE 1 AD9 9 PHE B 38 TRP B 56 TYR B 102 THR B 242 SITE 2 AD9 9 TYR B 246 ASN B 272 TRP B 376 GOL B 504 SITE 3 AD9 9 HOH B 606 CRYST1 73.766 73.766 185.010 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013556 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013556 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005405 0.00000