HEADER HYDROLASE 02-NOV-16 5M9R TITLE HUMAN ANGIOGENIN ALS VARIANT F100I COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANGIOGENIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RIBONUCLEASE 5,RNASE 5; COMPND 5 EC: 3.1.27.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ANG, RNASE5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ALS, RNASE, ANGIOGENESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.J.BRADSHAW,S.REHMAN,T.T.K.PHAM,N.THIYAGARAJAN,R.L.LEE, AUTHOR 2 V.SUBRAMANIAN,K.R.ACHARYA REVDAT 2 17-JAN-24 5M9R 1 REMARK REVDAT 1 22-FEB-17 5M9R 0 JRNL AUTH W.J.BRADSHAW,S.REHMAN,T.T.PHAM,N.THIYAGARAJAN,R.L.LEE, JRNL AUTH 2 V.SUBRAMANIAN,K.R.ACHARYA JRNL TITL STRUCTURAL INSIGHTS INTO HUMAN ANGIOGENIN VARIANTS JRNL TITL 2 IMPLICATED IN PARKINSON'S DISEASE AND AMYOTROPHIC LATERAL JRNL TITL 3 SCLEROSIS. JRNL REF SCI REP V. 7 41996 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28176817 JRNL DOI 10.1038/SREP41996 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0151 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 35788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1768 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.48 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2365 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.1820 REMARK 3 BIN FREE R VALUE SET COUNT : 123 REMARK 3 BIN FREE R VALUE : 0.2000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1942 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : 0.63000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.44000 REMARK 3 B23 (A**2) : -0.54000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.153 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2094 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1936 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2839 ; 1.621 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4463 ; 1.019 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 7.019 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;32.572 ;22.476 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 354 ;11.572 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;14.335 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 298 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2390 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 530 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 990 ; 1.008 ; 1.092 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 989 ; 1.005 ; 1.091 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1239 ; 1.685 ; 1.637 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1240 ; 1.685 ; 1.638 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1104 ; 1.295 ; 1.274 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1104 ; 1.295 ; 1.274 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1591 ; 2.089 ; 1.843 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2446 ; 4.556 ;14.893 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2353 ; 4.361 ;14.090 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5M9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37557 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 52.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ANG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NA/K TARTRATE 0.1 M NA REMARK 280 CACODYLATE 20% PEG 4000, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLN A 1 REMARK 465 MET B 0 REMARK 465 ARG B 122 REMARK 465 PRO B 123 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 1 CG CD OE1 NE2 REMARK 470 ARG B 121 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 3 O HOH A 301 2.10 REMARK 500 OD2 ASP A 2 O1 PEG A 203 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 363 O HOH B 390 1654 2.01 REMARK 500 O HOH A 307 O HOH B 396 1565 2.12 REMARK 500 O HOH A 363 O HOH B 310 1654 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 23 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 66 -135.94 51.44 REMARK 500 ASN B 61 26.85 -140.44 REMARK 500 ARG B 66 150.35 -33.28 REMARK 500 GLU B 67 64.59 21.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA B 202 DBREF 5M9R A 1 123 UNP P03950 ANGI_HUMAN 25 147 DBREF 5M9R B 1 123 UNP P03950 ANGI_HUMAN 25 147 SEQADV 5M9R MET A 0 UNP P03950 INITIATING METHIONINE SEQADV 5M9R ILE A 100 UNP P03950 PHE 124 ENGINEERED MUTATION SEQADV 5M9R MET B 0 UNP P03950 INITIATING METHIONINE SEQADV 5M9R ILE B 100 UNP P03950 PHE 124 ENGINEERED MUTATION SEQRES 1 A 124 MET GLN ASP ASN SER ARG TYR THR HIS PHE LEU THR GLN SEQRES 2 A 124 HIS TYR ASP ALA LYS PRO GLN GLY ARG ASP ASP ARG TYR SEQRES 3 A 124 CYS GLU SER ILE MET ARG ARG ARG GLY LEU THR SER PRO SEQRES 4 A 124 CYS LYS ASP ILE ASN THR PHE ILE HIS GLY ASN LYS ARG SEQRES 5 A 124 SER ILE LYS ALA ILE CYS GLU ASN LYS ASN GLY ASN PRO SEQRES 6 A 124 HIS ARG GLU ASN LEU ARG ILE SER LYS SER SER PHE GLN SEQRES 7 A 124 VAL THR THR CYS LYS LEU HIS GLY GLY SER PRO TRP PRO SEQRES 8 A 124 PRO CYS GLN TYR ARG ALA THR ALA GLY ILE ARG ASN VAL SEQRES 9 A 124 VAL VAL ALA CYS GLU ASN GLY LEU PRO VAL HIS LEU ASP SEQRES 10 A 124 GLN SER ILE PHE ARG ARG PRO SEQRES 1 B 124 MET GLN ASP ASN SER ARG TYR THR HIS PHE LEU THR GLN SEQRES 2 B 124 HIS TYR ASP ALA LYS PRO GLN GLY ARG ASP ASP ARG TYR SEQRES 3 B 124 CYS GLU SER ILE MET ARG ARG ARG GLY LEU THR SER PRO SEQRES 4 B 124 CYS LYS ASP ILE ASN THR PHE ILE HIS GLY ASN LYS ARG SEQRES 5 B 124 SER ILE LYS ALA ILE CYS GLU ASN LYS ASN GLY ASN PRO SEQRES 6 B 124 HIS ARG GLU ASN LEU ARG ILE SER LYS SER SER PHE GLN SEQRES 7 B 124 VAL THR THR CYS LYS LEU HIS GLY GLY SER PRO TRP PRO SEQRES 8 B 124 PRO CYS GLN TYR ARG ALA THR ALA GLY ILE ARG ASN VAL SEQRES 9 B 124 VAL VAL ALA CYS GLU ASN GLY LEU PRO VAL HIS LEU ASP SEQRES 10 B 124 GLN SER ILE PHE ARG ARG PRO HET TAR A 201 10 HET TLA A 202 10 HET PEG A 203 7 HET TAR B 201 10 HET TLA B 202 10 HETNAM TAR D(-)-TARTARIC ACID HETNAM TLA L(+)-TARTARIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 TAR 2(C4 H6 O6) FORMUL 4 TLA 2(C4 H6 O6) FORMUL 5 PEG C4 H10 O3 FORMUL 8 HOH *236(H2 O) HELIX 1 AA1 ASN A 3 TYR A 14 1 12 HELIX 2 AA2 ASP A 22 ARG A 33 1 12 HELIX 3 AA3 ASN A 49 ALA A 55 1 7 HELIX 4 AA4 ILE A 56 GLU A 58 5 3 HELIX 5 AA5 GLN A 117 ARG A 122 5 6 HELIX 6 AA6 ASN B 3 TYR B 14 1 12 HELIX 7 AA7 ASP B 22 ARG B 33 1 12 HELIX 8 AA8 ASN B 49 ALA B 55 1 7 HELIX 9 AA9 ILE B 56 GLU B 58 5 3 HELIX 10 AB1 GLN B 117 ARG B 121 5 5 SHEET 1 AA1 3 ILE A 42 ILE A 46 0 SHEET 2 AA1 3 PHE A 76 LEU A 83 -1 O THR A 79 N PHE A 45 SHEET 3 AA1 3 TYR A 94 ARG A 101 -1 O ARG A 101 N PHE A 76 SHEET 1 AA2 4 GLY A 62 HIS A 65 0 SHEET 2 AA2 4 LEU A 69 SER A 72 -1 O ILE A 71 N ASN A 63 SHEET 3 AA2 4 VAL A 104 GLU A 108 -1 O VAL A 105 N ARG A 70 SHEET 4 AA2 4 LEU A 111 LEU A 115 -1 O VAL A 113 N ALA A 106 SHEET 1 AA3 3 ILE B 42 ILE B 46 0 SHEET 2 AA3 3 PHE B 76 LEU B 83 -1 O CYS B 81 N ASN B 43 SHEET 3 AA3 3 TYR B 94 ARG B 101 -1 O THR B 97 N THR B 80 SHEET 1 AA4 4 GLY B 62 HIS B 65 0 SHEET 2 AA4 4 LEU B 69 SER B 72 -1 O ILE B 71 N ASN B 63 SHEET 3 AA4 4 VAL B 104 GLU B 108 -1 O VAL B 105 N ARG B 70 SHEET 4 AA4 4 LEU B 111 LEU B 115 -1 O VAL B 113 N ALA B 106 SSBOND 1 CYS A 26 CYS A 81 1555 1555 2.15 SSBOND 2 CYS A 39 CYS A 92 1555 1555 2.03 SSBOND 3 CYS A 57 CYS A 107 1555 1555 2.09 SSBOND 4 CYS B 26 CYS B 81 1555 1555 2.13 SSBOND 5 CYS B 39 CYS B 92 1555 1555 2.02 SSBOND 6 CYS B 57 CYS B 107 1555 1555 2.09 CISPEP 1 SER A 37 PRO A 38 0 4.74 CISPEP 2 PRO A 90 PRO A 91 0 8.79 CISPEP 3 ARG A 122 PRO A 123 0 -4.70 CISPEP 4 SER B 37 PRO B 38 0 7.46 CISPEP 5 SER B 37 PRO B 38 0 6.06 CISPEP 6 PRO B 90 PRO B 91 0 8.48 SITE 1 AC1 13 HIS A 8 GLN A 12 HIS A 13 LYS A 40 SITE 2 AC1 13 HIS A 114 GLN A 117 TLA A 202 HOH A 308 SITE 3 AC1 13 HOH A 369 ARG B 31 PRO B 91 CYS B 92 SITE 4 AC1 13 HOH B 305 SITE 1 AC2 10 GLN A 12 HIS A 13 LYS A 40 HIS A 114 SITE 2 AC2 10 LEU A 115 GLN A 117 TAR A 201 HOH A 339 SITE 3 AC2 10 ARG B 31 PRO B 91 SITE 1 AC3 10 ASP A 2 SER A 4 ARG A 101 ILE A 119 SITE 2 AC3 10 ARG A 122 PRO A 123 HOH A 318 HIS B 84 SITE 3 AC3 10 GLN B 93 HOH B 321 SITE 1 AC4 14 PRO A 90 PRO A 91 GLN B 12 HIS B 13 SITE 2 AC4 14 LYS B 40 HIS B 114 LEU B 115 GLN B 117 SITE 3 AC4 14 TLA B 202 HOH B 303 HOH B 317 HOH B 338 SITE 4 AC4 14 HOH B 345 HOH B 352 SITE 1 AC5 13 ARG A 31 PRO A 91 CYS A 92 HIS B 8 SITE 2 AC5 13 GLN B 12 HIS B 13 LYS B 40 LEU B 115 SITE 3 AC5 13 GLN B 117 TAR B 201 HOH B 320 HOH B 344 SITE 4 AC5 13 HOH B 352 CRYST1 30.878 34.781 52.920 89.72 84.17 84.34 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032386 -0.003210 -0.003323 0.00000 SCALE2 0.000000 0.028892 0.000150 0.00000 SCALE3 0.000000 0.000000 0.018995 0.00000