HEADER SUGAR BINDING PROTEIN 07-NOV-16 5MAZ TITLE STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PA14 TITLE 2 IN COMPLEX WITH 3-THIOPHENESULFONAMIDE-2,5-DIMETHYL-N-METHYL-BETA-L- TITLE 3 FUCOPYRANOSIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUCOSE-BINDING LECTIN PA-IIL; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 2-115; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14); SOURCE 3 ORGANISM_TAXID: 208963; SOURCE 4 GENE: LECB, PA14_20610; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET22B; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRS01.4 KEYWDS SUGAR BINDING PROTEIN, LECTIN, LECB, PSEUDOMONAS AERUGINOSA PA14, KEYWDS 2 GLYCOINHIBITORS EXPDTA X-RAY DIFFRACTION AUTHOR R.SOMMER,A.IMBERTY,A.TITZ,A.VARROT REVDAT 3 17-JAN-24 5MAZ 1 HETSYN REVDAT 2 29-JUL-20 5MAZ 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 20-DEC-17 5MAZ 0 JRNL AUTH R.SOMMER,S.WAGNER,A.VARROT,D.HAUK,T.RYCKMANS,R.W.HARTMAN, JRNL AUTH 2 T.BRUNNER,C.RADEMACHER,A.IMBERTY,A.TITZ JRNL TITL DISCOVERY OF A NEW CLASS OF C-GLYCOSIDE BASED INHIBITORS OF JRNL TITL 2 THE VIRULENCE FACTOR LECB FROM PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 67895 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.124 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.142 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3598 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4995 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.1510 REMARK 3 BIN FREE R VALUE SET COUNT : 268 REMARK 3 BIN FREE R VALUE : 0.1670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3292 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 656 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 7.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.14000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.052 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.052 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.797 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3626 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3362 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5008 ; 1.788 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7687 ; 0.989 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 500 ; 6.579 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;47.396 ;27.707 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 510 ; 9.818 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;10.389 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 623 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4464 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 836 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1940 ; 0.827 ; 0.922 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1939 ; 0.827 ; 0.922 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2460 ; 1.233 ; 1.387 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2461 ; 1.233 ; 1.387 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1686 ; 1.452 ; 1.076 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1686 ; 1.452 ; 1.077 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2549 ; 2.108 ; 1.564 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3886 ; 4.089 ;13.229 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3846 ; 3.998 ;12.953 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 114 B 1 114 7182 0.06 0.05 REMARK 3 2 A 1 114 C 1 114 7084 0.06 0.05 REMARK 3 3 A 1 114 D 1 114 7108 0.07 0.05 REMARK 3 4 B 1 114 C 1 114 7352 0.06 0.05 REMARK 3 5 B 1 114 D 1 114 7368 0.08 0.05 REMARK 3 6 C 1 114 D 1 114 7098 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5MAZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002216. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 2016 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71656 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 37.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.30800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 5A6Q REMARK 200 REMARK 200 REMARK: CLUSTER OF RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG8K 50 MM AMSO4 0.1M TRIS-HCL PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.25100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 192.50200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 144.37650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 240.62750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.12550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 86 -40.36 -145.75 REMARK 500 SER A 97 -136.11 -149.58 REMARK 500 GLU B 86 -38.78 -148.82 REMARK 500 SER B 97 -134.41 -153.89 REMARK 500 SER B 97 -134.38 -153.02 REMARK 500 GLU C 86 -38.32 -149.78 REMARK 500 SER C 97 -139.62 -147.02 REMARK 500 GLU D 86 -38.94 -148.88 REMARK 500 GLU D 86 -39.29 -149.22 REMARK 500 SER D 97 -136.34 -148.62 REMARK 500 SER D 97 -136.85 -149.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 21 O REMARK 620 2 ASP A 101 OD1 144.0 REMARK 620 3 ASP A 101 OD2 152.4 46.0 REMARK 620 4 ASN A 103 OD1 84.9 71.7 76.0 REMARK 620 5 ASP A 104 OD1 82.4 70.3 116.3 88.4 REMARK 620 6 FUL A 203 O4 77.7 129.9 114.8 158.0 102.2 REMARK 620 7 FUL A 203 O3 132.8 63.7 73.6 135.5 76.9 66.3 REMARK 620 8 GLY B 114 O 79.2 125.0 80.2 87.4 161.4 76.3 118.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 95 OE1 REMARK 620 2 GLU A 95 OE2 53.7 REMARK 620 3 ASP A 99 OD1 85.5 81.6 REMARK 620 4 ASP A 101 OD1 78.2 131.0 86.8 REMARK 620 5 ASP A 104 OD1 118.0 129.3 148.0 78.1 REMARK 620 6 ASP A 104 OD2 84.4 79.4 161.0 106.8 50.4 REMARK 620 7 FUL A 203 O3 148.7 146.1 78.0 74.6 70.9 117.9 REMARK 620 8 FUL A 203 O2 141.9 88.6 95.2 140.0 79.5 83.0 66.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 114 O REMARK 620 2 ASN B 21 O 78.2 REMARK 620 3 ASP B 101 OD1 125.8 144.2 REMARK 620 4 ASP B 101 OD2 81.1 152.8 46.0 REMARK 620 5 ASN B 103 OD1 86.4 85.1 72.1 76.0 REMARK 620 6 ASP B 104 OD1 160.2 82.3 70.2 116.2 88.6 REMARK 620 7 FUL B 203 O3 119.8 132.7 63.1 73.5 135.2 76.5 REMARK 620 8 FUL B 203 O4 77.9 77.4 129.2 115.3 158.5 101.2 66.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 95 OE1 REMARK 620 2 GLU B 95 OE2 53.7 REMARK 620 3 ASP B 99 OD1 85.3 81.5 REMARK 620 4 ASP B 101 OD1 78.6 131.5 87.0 REMARK 620 5 ASP B 104 OD1 119.2 129.5 147.6 78.3 REMARK 620 6 ASP B 104 OD2 84.1 79.3 160.8 106.4 51.0 REMARK 620 7 FUL B 203 O2 139.8 86.4 94.6 141.6 80.2 83.4 REMARK 620 8 FUL B 203 O3 148.9 145.1 77.5 74.9 70.9 118.8 68.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 21 O REMARK 620 2 ASP C 101 OD1 143.9 REMARK 620 3 ASP C 101 OD2 152.4 45.1 REMARK 620 4 ASN C 103 OD1 85.2 71.2 75.0 REMARK 620 5 ASP C 104 OD1 83.0 69.5 114.6 87.7 REMARK 620 6 FUL C 203 O3 133.7 63.1 73.1 134.3 77.0 REMARK 620 7 FUL C 203 O4 78.8 128.9 115.0 159.4 102.8 66.0 REMARK 620 8 GLY D 114 O 78.9 125.0 81.1 87.0 161.5 118.7 77.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 95 OE1 REMARK 620 2 GLU C 95 OE2 52.7 REMARK 620 3 ASP C 99 OD1 86.2 80.4 REMARK 620 4 ASP C 101 OD1 77.7 129.6 88.9 REMARK 620 5 ASP C 104 OD1 117.7 129.1 149.1 78.4 REMARK 620 6 ASP C 104 OD2 83.8 79.0 159.2 106.6 50.5 REMARK 620 7 FUL C 203 O3 148.1 147.7 78.6 74.2 70.9 118.5 REMARK 620 8 FUL C 203 O2 142.9 90.7 93.7 139.4 78.9 83.6 66.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY C 114 O REMARK 620 2 ASN D 21 O 79.0 REMARK 620 3 ASP D 101 OD1 124.0 144.1 REMARK 620 4 ASP D 101 OD2 79.8 151.9 45.6 REMARK 620 5 ASN D 103 OD1 86.8 84.7 71.0 76.0 REMARK 620 6 ASP D 104 OD1 161.2 82.8 70.1 115.7 86.9 REMARK 620 7 FUL D 203 O3 119.7 133.8 63.0 73.3 134.0 76.8 REMARK 620 8 FUL D 203 O4 78.5 78.9 129.0 114.4 159.7 102.6 66.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 95 OE1 REMARK 620 2 GLU D 95 OE2 52.6 REMARK 620 3 ASP D 99 OD1 85.8 80.9 REMARK 620 4 ASP D 101 OD1 77.5 129.4 88.0 REMARK 620 5 ASP D 104 OD1 117.6 129.2 148.9 78.4 REMARK 620 6 ASP D 104 OD2 83.9 78.7 159.4 107.0 50.9 REMARK 620 7 FUL D 203 O2 141.6 89.4 94.5 140.9 79.7 82.8 REMARK 620 8 FUL D 203 O3 148.1 147.9 78.6 74.3 70.8 118.5 68.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5A6Q RELATED DB: PDB REMARK 900 5A6Q IS THE SAME PROTEIN IN THE APO FORM DBREF1 5MAZ A 1 114 UNP A0A0H2ZE85_PSEAB DBREF2 5MAZ A A0A0H2ZE85 2 115 DBREF1 5MAZ B 1 114 UNP A0A0H2ZE85_PSEAB DBREF2 5MAZ B A0A0H2ZE85 2 115 DBREF1 5MAZ C 1 114 UNP A0A0H2ZE85_PSEAB DBREF2 5MAZ C A0A0H2ZE85 2 115 DBREF1 5MAZ D 1 114 UNP A0A0H2ZE85_PSEAB DBREF2 5MAZ D A0A0H2ZE85 2 115 SEQRES 1 A 114 ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR GLN SEQRES 2 A 114 PHE GLY VAL THR ALA PHE ALA ASN SER ALA GLY THR GLN SEQRES 3 A 114 THR VAL ASN VAL GLN VAL ASN ASN GLU THR VAL ALA THR SEQRES 4 A 114 PHE THR GLY GLN SER THR ASN ASN ALA ILE ILE GLY SER SEQRES 5 A 114 LYS VAL LEU ASN SER GLY GLY GLY GLY LYS VAL GLN ILE SEQRES 6 A 114 LEU VAL SER VAL ASN GLY ARG SER SER ASP LEU VAL SER SEQRES 7 A 114 ALA GLN VAL ILE LEU ALA ASN GLU LEU ASN PHE ALA LEU SEQRES 8 A 114 VAL GLY SER GLU ASP SER THR ASP ASN ASP TYR ASN ASP SEQRES 9 A 114 ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 B 114 ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR GLN SEQRES 2 B 114 PHE GLY VAL THR ALA PHE ALA ASN SER ALA GLY THR GLN SEQRES 3 B 114 THR VAL ASN VAL GLN VAL ASN ASN GLU THR VAL ALA THR SEQRES 4 B 114 PHE THR GLY GLN SER THR ASN ASN ALA ILE ILE GLY SER SEQRES 5 B 114 LYS VAL LEU ASN SER GLY GLY GLY GLY LYS VAL GLN ILE SEQRES 6 B 114 LEU VAL SER VAL ASN GLY ARG SER SER ASP LEU VAL SER SEQRES 7 B 114 ALA GLN VAL ILE LEU ALA ASN GLU LEU ASN PHE ALA LEU SEQRES 8 B 114 VAL GLY SER GLU ASP SER THR ASP ASN ASP TYR ASN ASP SEQRES 9 B 114 ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 C 114 ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR GLN SEQRES 2 C 114 PHE GLY VAL THR ALA PHE ALA ASN SER ALA GLY THR GLN SEQRES 3 C 114 THR VAL ASN VAL GLN VAL ASN ASN GLU THR VAL ALA THR SEQRES 4 C 114 PHE THR GLY GLN SER THR ASN ASN ALA ILE ILE GLY SER SEQRES 5 C 114 LYS VAL LEU ASN SER GLY GLY GLY GLY LYS VAL GLN ILE SEQRES 6 C 114 LEU VAL SER VAL ASN GLY ARG SER SER ASP LEU VAL SER SEQRES 7 C 114 ALA GLN VAL ILE LEU ALA ASN GLU LEU ASN PHE ALA LEU SEQRES 8 C 114 VAL GLY SER GLU ASP SER THR ASP ASN ASP TYR ASN ASP SEQRES 9 C 114 ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 D 114 ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR GLN SEQRES 2 D 114 PHE GLY VAL THR ALA PHE ALA ASN SER ALA GLY THR GLN SEQRES 3 D 114 THR VAL ASN VAL GLN VAL ASN ASN GLU THR VAL ALA THR SEQRES 4 D 114 PHE THR GLY GLN SER THR ASN ASN ALA ILE ILE GLY SER SEQRES 5 D 114 LYS VAL LEU ASN SER GLY GLY GLY GLY LYS VAL GLN ILE SEQRES 6 D 114 LEU VAL SER VAL ASN GLY ARG SER SER ASP LEU VAL SER SEQRES 7 D 114 ALA GLN VAL ILE LEU ALA ASN GLU LEU ASN PHE ALA LEU SEQRES 8 D 114 VAL GLY SER GLU ASP SER THR ASP ASN ASP TYR ASN ASP SEQRES 9 D 114 ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY HET CA A 201 1 HET CA A 202 1 HET FUL A 203 10 HET IGF A 204 12 HET FUL B 203 10 HET IGF B 204 12 HET CA B 202 1 HET CA B 201 1 HET EDO B 205 4 HET CA C 201 1 HET CA C 202 1 HET FUL C 203 10 HET IGF C 204 12 HET FUL D 203 10 HET IGF D 204 12 HET CA D 202 1 HET CA D 201 1 HET GOL D 205 6 HETNAM CA CALCIUM ION HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM IGF N,2,5-TRIMETHYL-3-THIOPHENESULFONAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 CA 8(CA 2+) FORMUL 7 FUL 4(C6 H12 O5) FORMUL 8 IGF 4(C7 H11 N O2 S2) FORMUL 13 EDO C2 H6 O2 FORMUL 22 GOL C3 H8 O3 FORMUL 23 HOH *656(H2 O) SHEET 1 A 4 VAL A 5 THR A 7 0 SHEET 2 A 4 LYS A 62 VAL A 69 -1 SHEET 3 A 4 GLN A 26 VAL A 32 -1 SHEET 4 A 4 GLU A 35 GLY A 42 -1 SHEET 1 B 5 ASP A 75 LEU A 83 0 SHEET 2 B 5 LEU A 87 GLU A 95 -1 SHEET 3 B 5 ALA A 105 TRP A 111 -1 SHEET 4 B 5 GLN A 13 ALA A 20 -1 SHEET 5 B 5 ALA A 48 ASN A 56 -1 SHEET 1 C 4 VAL B 5 THR B 7 0 SHEET 2 C 4 LYS B 62 VAL B 69 -1 SHEET 3 C 4 GLN B 26 VAL B 32 -1 SHEET 4 C 4 GLU B 35 GLY B 42 -1 SHEET 1 D 5 ASP B 75 LEU B 83 0 SHEET 2 D 5 LEU B 87 GLU B 95 -1 SHEET 3 D 5 ALA B 105 TRP B 111 -1 SHEET 4 D 5 GLN B 13 ALA B 20 -1 SHEET 5 D 5 ALA B 48 ASN B 56 -1 SHEET 1 E 4 VAL C 5 THR C 7 0 SHEET 2 E 4 LYS C 62 VAL C 69 -1 SHEET 3 E 4 GLN C 26 VAL C 32 -1 SHEET 4 E 4 GLU C 35 GLY C 42 -1 SHEET 1 F 5 ASP C 75 LEU C 83 0 SHEET 2 F 5 LEU C 87 GLU C 95 -1 SHEET 3 F 5 ALA C 105 TRP C 111 -1 SHEET 4 F 5 GLN C 13 ALA C 20 -1 SHEET 5 F 5 ALA C 48 ASN C 56 -1 SHEET 1 G 4 VAL D 5 THR D 7 0 SHEET 2 G 4 LYS D 62 VAL D 69 -1 SHEET 3 G 4 GLN D 26 VAL D 32 -1 SHEET 4 G 4 GLU D 35 GLY D 42 -1 SHEET 1 H 5 ASP D 75 LEU D 83 0 SHEET 2 H 5 LEU D 87 GLU D 95 -1 SHEET 3 H 5 ALA D 105 TRP D 111 -1 SHEET 4 H 5 GLN D 13 ALA D 20 -1 SHEET 5 H 5 ALA D 48 ASN D 56 -1 LINK C1 FUL A 203 C1 IGF A 204 1555 1555 1.47 LINK C1 FUL B 203 C1 IGF B 204 1555 1555 1.54 LINK C1 FUL C 203 C1 IGF C 204 1555 1555 1.49 LINK C1 FUL D 203 C1 IGF D 204 1555 1555 1.52 LINK O ASN A 21 CA CA A 202 1555 1555 2.38 LINK OE1 GLU A 95 CA CA A 201 1555 1555 2.47 LINK OE2 GLU A 95 CA CA A 201 1555 1555 2.41 LINK OD1 ASP A 99 CA CA A 201 1555 1555 2.31 LINK OD1 ASP A 101 CA CA A 201 1555 1555 2.37 LINK OD1 ASP A 101 CA CA A 202 1555 1555 3.06 LINK OD2 ASP A 101 CA CA A 202 1555 1555 2.43 LINK OD1 ASN A 103 CA CA A 202 1555 1555 2.32 LINK OD1 ASP A 104 CA CA A 201 1555 1555 2.66 LINK OD2 ASP A 104 CA CA A 201 1555 1555 2.44 LINK OD1 ASP A 104 CA CA A 202 1555 1555 2.37 LINK O GLY A 114 CA CA B 202 1555 1555 2.45 LINK CA CA A 201 O3 FUL A 203 1555 1555 2.50 LINK CA CA A 201 O2 FUL A 203 1555 1555 2.51 LINK CA CA A 202 O4 FUL A 203 1555 1555 2.45 LINK CA CA A 202 O3 FUL A 203 1555 1555 2.44 LINK CA CA A 202 O GLY B 114 1555 1555 2.47 LINK O ASN B 21 CA CA B 202 1555 1555 2.39 LINK OE1 GLU B 95 CA CA B 201 1555 1555 2.48 LINK OE2 GLU B 95 CA CA B 201 1555 1555 2.42 LINK OD1 ASP B 99 CA CA B 201 1555 1555 2.32 LINK OD1 ASP B 101 CA CA B 201 1555 1555 2.34 LINK OD1 ASP B 101 CA CA B 202 1555 1555 3.05 LINK OD2 ASP B 101 CA CA B 202 1555 1555 2.42 LINK OD1 ASN B 103 CA CA B 202 1555 1555 2.32 LINK OD1 ASP B 104 CA CA B 201 1555 1555 2.66 LINK OD2 ASP B 104 CA CA B 201 1555 1555 2.43 LINK OD1 ASP B 104 CA CA B 202 1555 1555 2.37 LINK CA CA B 201 O2 FUL B 203 1555 1555 2.55 LINK CA CA B 201 O3 FUL B 203 1555 1555 2.47 LINK CA CA B 202 O3 FUL B 203 1555 1555 2.45 LINK CA CA B 202 O4 FUL B 203 1555 1555 2.51 LINK O ASN C 21 CA CA C 202 1555 1555 2.35 LINK OE1 GLU C 95 CA CA C 201 1555 1555 2.47 LINK OE2 GLU C 95 CA CA C 201 1555 1555 2.39 LINK OD1 ASP C 99 CA CA C 201 1555 1555 2.32 LINK OD1 ASP C 101 CA CA C 201 1555 1555 2.36 LINK OD1 ASP C 101 CA CA C 202 1555 1555 3.09 LINK OD2 ASP C 101 CA CA C 202 1555 1555 2.46 LINK OD1 ASN C 103 CA CA C 202 1555 1555 2.34 LINK OD1 ASP C 104 CA CA C 201 1555 1555 2.65 LINK OD2 ASP C 104 CA CA C 201 1555 1555 2.46 LINK OD1 ASP C 104 CA CA C 202 1555 1555 2.39 LINK O GLY C 114 CA CA D 202 1555 1555 2.41 LINK CA CA C 201 O3 FUL C 203 1555 1555 2.51 LINK CA CA C 201 O2 FUL C 203 1555 1555 2.49 LINK CA CA C 202 O3 FUL C 203 1555 1555 2.43 LINK CA CA C 202 O4 FUL C 203 1555 1555 2.48 LINK CA CA C 202 O GLY D 114 1555 1555 2.46 LINK O ASN D 21 CA CA D 202 1555 1555 2.35 LINK OE1 GLU D 95 CA CA D 201 1555 1555 2.50 LINK OE2 GLU D 95 CA CA D 201 1555 1555 2.42 LINK OD1 ASP D 99 CA CA D 201 1555 1555 2.31 LINK OD1 ASP D 101 CA CA D 201 1555 1555 2.37 LINK OD1 ASP D 101 CA CA D 202 1555 1555 3.07 LINK OD2 ASP D 101 CA CA D 202 1555 1555 2.45 LINK OD1 ASN D 103 CA CA D 202 1555 1555 2.35 LINK OD1 ASP D 104 CA CA D 201 1555 1555 2.65 LINK OD2 ASP D 104 CA CA D 201 1555 1555 2.44 LINK OD1 ASP D 104 CA CA D 202 1555 1555 2.37 LINK CA CA D 201 O2 FUL D 203 1555 1555 2.51 LINK CA CA D 201 O3 FUL D 203 1555 1555 2.47 LINK CA CA D 202 O3 FUL D 203 1555 1555 2.42 LINK CA CA D 202 O4 FUL D 203 1555 1555 2.50 CISPEP 1 TRP A 111 PRO A 112 0 -7.98 CISPEP 2 TRP B 111 PRO B 112 0 -5.77 CISPEP 3 TRP C 111 PRO C 112 0 -3.99 CISPEP 4 TRP D 111 PRO D 112 0 -9.61 CRYST1 49.881 49.881 288.753 90.00 90.00 120.00 P 61 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020048 0.011575 0.000000 0.00000 SCALE2 0.000000 0.023149 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003463 0.00000