HEADER LYASE 08-NOV-16 5MBJ TITLE STRUCTURE OF A BACTERIAL LIGHT-REGULATED ADENYLYL CYCLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA SUBUNIT OF PHOTOACTIVATED ADENYLYL CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BEGGIATOA SP. PS; SOURCE 3 ORGANISM_TAXID: 422289; SOURCE 4 GENE: BGP_1043; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS BLUF, ADENYLYL CYCLASE, PHOTORECEPTOR, OPTOGENETICS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR R.LINDNER,E.HARTMANN,M.TARNAWSKI,A.WINKLER,D.FREY,J.REINSTEIN, AUTHOR 2 A.MEINHART,I.SCHLICHTING REVDAT 3 17-JAN-24 5MBJ 1 REMARK REVDAT 2 03-MAY-17 5MBJ 1 JRNL REVDAT 1 05-APR-17 5MBJ 0 JRNL AUTH R.LINDNER,E.HARTMANN,M.TARNAWSKI,A.WINKLER,D.FREY, JRNL AUTH 2 J.REINSTEIN,A.MEINHART,I.SCHLICHTING JRNL TITL PHOTOACTIVATION MECHANISM OF A BACTERIAL LIGHT-REGULATED JRNL TITL 2 ADENYLYL CYCLASE. JRNL REF J. MOL. BIOL. V. 429 1336 2017 JRNL REFN ESSN 1089-8638 JRNL PMID 28336405 JRNL DOI 10.1016/J.JMB.2017.03.020 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 30125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.350 REMARK 3 FREE R VALUE TEST SET COUNT : 709 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2530 - 3.9325 0.96 5884 163 0.1633 0.2048 REMARK 3 2 3.9325 - 3.1216 0.96 5868 168 0.1988 0.2684 REMARK 3 3 3.1216 - 2.7270 0.96 5899 164 0.2437 0.3261 REMARK 3 4 2.7270 - 2.4777 0.95 5863 117 0.2802 0.3240 REMARK 3 5 2.4777 - 2.3001 0.96 5902 97 0.3004 0.3437 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 5612 REMARK 3 ANGLE : 1.539 7628 REMARK 3 CHIRALITY : 0.094 912 REMARK 3 PLANARITY : 0.008 953 REMARK 3 DIHEDRAL : 23.072 2119 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5456 16.9883 39.6125 REMARK 3 T TENSOR REMARK 3 T11: 0.8057 T22: 0.6389 REMARK 3 T33: 0.4018 T12: -0.0131 REMARK 3 T13: 0.0019 T23: -0.0594 REMARK 3 L TENSOR REMARK 3 L11: 3.4491 L22: 5.1938 REMARK 3 L33: 6.4545 L12: -0.6224 REMARK 3 L13: 0.1601 L23: 1.4814 REMARK 3 S TENSOR REMARK 3 S11: -0.2171 S12: -0.7256 S13: 0.5026 REMARK 3 S21: 0.7720 S22: 0.0791 S23: 0.0954 REMARK 3 S31: -0.6925 S32: -0.4995 S33: 0.0827 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7010 16.8132 2.5992 REMARK 3 T TENSOR REMARK 3 T11: 0.2823 T22: 0.2264 REMARK 3 T33: 0.3489 T12: 0.0096 REMARK 3 T13: -0.0131 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 3.2655 L22: 4.1558 REMARK 3 L33: 1.9162 L12: 0.7110 REMARK 3 L13: 0.0847 L23: -0.8591 REMARK 3 S TENSOR REMARK 3 S11: -0.0519 S12: 0.3043 S13: -0.0434 REMARK 3 S21: -0.2286 S22: 0.1732 S23: 0.3677 REMARK 3 S31: 0.0185 S32: -0.0814 S33: -0.1094 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3500 -7.2359 39.5274 REMARK 3 T TENSOR REMARK 3 T11: 1.0334 T22: 0.7979 REMARK 3 T33: 0.4617 T12: 0.0103 REMARK 3 T13: -0.0708 T23: 0.0820 REMARK 3 L TENSOR REMARK 3 L11: 3.7005 L22: 4.4329 REMARK 3 L33: 6.2778 L12: -1.3054 REMARK 3 L13: 1.2079 L23: -1.9300 REMARK 3 S TENSOR REMARK 3 S11: 0.0755 S12: -0.6667 S13: -0.6181 REMARK 3 S21: 0.2927 S22: 0.0891 S23: 0.1195 REMARK 3 S31: 1.5104 S32: 0.6512 S33: -0.2094 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7428 -7.8527 2.3956 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.2323 REMARK 3 T33: 0.2601 T12: 0.0260 REMARK 3 T13: 0.0041 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 3.5635 L22: 5.2187 REMARK 3 L33: 1.7420 L12: 0.7112 REMARK 3 L13: -0.0972 L23: 0.4263 REMARK 3 S TENSOR REMARK 3 S11: -0.0628 S12: 0.3318 S13: 0.0456 REMARK 3 S21: -0.3078 S22: 0.0755 S23: -0.0556 REMARK 3 S31: 0.0144 S32: 0.0094 S33: -0.0120 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MBJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200001780. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30125 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 45.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5M27 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.0, 0.3 M MG(NO3)2, REMARK 280 23 % W/V PEG 2000; CRYOPROTECTION IN 0.1 M TRIS HCL PH 8.0, 50 REMARK 280 MM MGCL2, 35 % W/V PEG 3350, PH 7.0, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY A 13 REMARK 465 HIS A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 LYS A 315 REMARK 465 GLY A 316 REMARK 465 LYS A 317 REMARK 465 GLN A 318 REMARK 465 ASN A 348 REMARK 465 ASP A 349 REMARK 465 LYS A 350 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 HIS B 14 REMARK 465 LEU B 15 REMARK 465 SER B 16 REMARK 465 LYS B 315 REMARK 465 GLY B 316 REMARK 465 LYS B 317 REMARK 465 GLN B 318 REMARK 465 ASN B 348 REMARK 465 ASP B 349 REMARK 465 LYS B 350 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 37 O TRP B 91 1.86 REMARK 500 NH2 ARG A 4 OE1 GLU A 80 1.99 REMARK 500 OE2 GLU B 328 O HOH B 401 2.02 REMARK 500 O ASN A 178 OG SER A 182 2.09 REMARK 500 OE1 GLU A 150 NZ LYS A 209 2.10 REMARK 500 O GLU A 150 O HOH A 501 2.12 REMARK 500 O ASN B 178 OG SER B 182 2.13 REMARK 500 O HOH B 420 O HOH B 429 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 94 OE2 GLU A 319 1556 1.59 REMARK 500 OE2 GLU A 18 NH2 ARG B 22 1565 1.97 REMARK 500 O HOH A 547 O HOH B 409 1565 1.99 REMARK 500 NZ LYS A 94 CD GLU A 319 1556 2.10 REMARK 500 NZ LYS B 94 OD1 ASP B 334 1556 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 300 CB CYS A 300 SG -0.121 REMARK 500 CYS B 184 CB CYS B 184 SG -0.137 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 65 CG1 - CB - CG2 ANGL. DEV. = -14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 28 -19.87 -49.18 REMARK 500 ASN A 35 51.64 72.16 REMARK 500 MET A 93 112.00 -169.14 REMARK 500 PRO A 287 2.32 -57.22 REMARK 500 ASN B 35 17.15 82.11 REMARK 500 ARG B 70 -77.24 -54.03 REMARK 500 ASN B 101 97.36 -65.25 REMARK 500 MET B 105 10.75 -68.79 REMARK 500 GLN B 137 6.33 -59.10 REMARK 500 PRO B 287 22.28 -76.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 401 DBREF 5MBJ A 1 350 UNP A7BT71 A7BT71_9GAMM 1 350 DBREF 5MBJ B 1 350 UNP A7BT71 A7BT71_9GAMM 1 350 SEQADV 5MBJ GLY A -2 UNP A7BT71 EXPRESSION TAG SEQADV 5MBJ SER A -1 UNP A7BT71 EXPRESSION TAG SEQADV 5MBJ HIS A 0 UNP A7BT71 EXPRESSION TAG SEQADV 5MBJ VAL A 8 UNP A7BT71 ILE 8 ENGINEERED MUTATION SEQADV 5MBJ VAL A 116 UNP A7BT71 ILE 116 ENGINEERED MUTATION SEQADV 5MBJ GLY B -2 UNP A7BT71 EXPRESSION TAG SEQADV 5MBJ SER B -1 UNP A7BT71 EXPRESSION TAG SEQADV 5MBJ HIS B 0 UNP A7BT71 EXPRESSION TAG SEQADV 5MBJ VAL B 8 UNP A7BT71 ILE 8 ENGINEERED MUTATION SEQADV 5MBJ VAL B 116 UNP A7BT71 ILE 116 ENGINEERED MUTATION SEQRES 1 A 353 GLY SER HIS MET MET LYS ARG LEU VAL TYR VAL SER LYS SEQRES 2 A 353 ILE SER GLY HIS LEU SER LEU GLU GLU ILE GLN ARG ILE SEQRES 3 A 353 GLY LYS VAL SER ILE LYS ASN ASN GLN ARG ASP ASN ILE SEQRES 4 A 353 THR GLY VAL LEU LEU TYR LEU GLN GLY LEU PHE PHE GLN SEQRES 5 A 353 ILE LEU GLU GLY GLU ASN GLU LYS VAL ASP LYS LEU TYR SEQRES 6 A 353 LYS LYS ILE LEU VAL ASP ASP ARG HIS THR ASN ILE LEU SEQRES 7 A 353 CYS LEU LYS THR GLU TYR ASP ILE THR ASP ARG MET PHE SEQRES 8 A 353 PRO ASN TRP ALA MET LYS THR ILE ASN LEU ASN GLU ASN SEQRES 9 A 353 SER GLU LEU MET ILE GLN PRO ILE LYS SER LEU LEU GLN SEQRES 10 A 353 THR VAL THR GLN SER HIS ARG VAL LEU GLU LYS TYR MET SEQRES 11 A 353 PRO ALA ARG VAL ILE TYR LEU ILE ASN GLN GLY ILE ASN SEQRES 12 A 353 PRO LEU THR VAL GLU PRO GLN LEU VAL GLU LYS ILE ILE SEQRES 13 A 353 PHE PHE SER ASP ILE LEU ALA PHE SER THR LEU THR GLU SEQRES 14 A 353 LYS LEU PRO VAL ASN GLU VAL VAL ILE LEU VAL ASN ARG SEQRES 15 A 353 TYR PHE SER ILE CYS THR ARG ILE ILE SER ALA TYR GLY SEQRES 16 A 353 GLY GLU VAL THR LYS PHE ILE GLY ASP CYS VAL MET ALA SEQRES 17 A 353 SER PHE THR LYS GLU GLN GLY ASP ALA ALA ILE ARG THR SEQRES 18 A 353 SER LEU ASP ILE ILE SER GLU LEU LYS GLN LEU ARG HIS SEQRES 19 A 353 HIS VAL GLU ALA THR ASN PRO LEU HIS LEU LEU TYR THR SEQRES 20 A 353 GLY ILE GLY LEU SER TYR GLY HIS VAL ILE GLU GLY ASN SEQRES 21 A 353 MET GLY SER SER LEU LYS MET ASP HIS THR LEU LEU GLY SEQRES 22 A 353 ASP ALA VAL ASN VAL ALA ALA ARG LEU GLU ALA LEU THR SEQRES 23 A 353 ARG GLN LEU PRO TYR ALA LEU ALA PHE THR ALA GLY VAL SEQRES 24 A 353 LYS LYS CYS CYS GLN ALA GLN TRP THR PHE ILE ASN LEU SEQRES 25 A 353 GLY ALA HIS GLN VAL LYS GLY LYS GLN GLU ALA ILE GLU SEQRES 26 A 353 VAL TYR THR VAL ASN GLU ALA GLN LYS TYR TYR ASP THR SEQRES 27 A 353 LEU GLN ILE THR GLN LEU ILE ARG GLN THR LEU GLU ASN SEQRES 28 A 353 ASP LYS SEQRES 1 B 353 GLY SER HIS MET MET LYS ARG LEU VAL TYR VAL SER LYS SEQRES 2 B 353 ILE SER GLY HIS LEU SER LEU GLU GLU ILE GLN ARG ILE SEQRES 3 B 353 GLY LYS VAL SER ILE LYS ASN ASN GLN ARG ASP ASN ILE SEQRES 4 B 353 THR GLY VAL LEU LEU TYR LEU GLN GLY LEU PHE PHE GLN SEQRES 5 B 353 ILE LEU GLU GLY GLU ASN GLU LYS VAL ASP LYS LEU TYR SEQRES 6 B 353 LYS LYS ILE LEU VAL ASP ASP ARG HIS THR ASN ILE LEU SEQRES 7 B 353 CYS LEU LYS THR GLU TYR ASP ILE THR ASP ARG MET PHE SEQRES 8 B 353 PRO ASN TRP ALA MET LYS THR ILE ASN LEU ASN GLU ASN SEQRES 9 B 353 SER GLU LEU MET ILE GLN PRO ILE LYS SER LEU LEU GLN SEQRES 10 B 353 THR VAL THR GLN SER HIS ARG VAL LEU GLU LYS TYR MET SEQRES 11 B 353 PRO ALA ARG VAL ILE TYR LEU ILE ASN GLN GLY ILE ASN SEQRES 12 B 353 PRO LEU THR VAL GLU PRO GLN LEU VAL GLU LYS ILE ILE SEQRES 13 B 353 PHE PHE SER ASP ILE LEU ALA PHE SER THR LEU THR GLU SEQRES 14 B 353 LYS LEU PRO VAL ASN GLU VAL VAL ILE LEU VAL ASN ARG SEQRES 15 B 353 TYR PHE SER ILE CYS THR ARG ILE ILE SER ALA TYR GLY SEQRES 16 B 353 GLY GLU VAL THR LYS PHE ILE GLY ASP CYS VAL MET ALA SEQRES 17 B 353 SER PHE THR LYS GLU GLN GLY ASP ALA ALA ILE ARG THR SEQRES 18 B 353 SER LEU ASP ILE ILE SER GLU LEU LYS GLN LEU ARG HIS SEQRES 19 B 353 HIS VAL GLU ALA THR ASN PRO LEU HIS LEU LEU TYR THR SEQRES 20 B 353 GLY ILE GLY LEU SER TYR GLY HIS VAL ILE GLU GLY ASN SEQRES 21 B 353 MET GLY SER SER LEU LYS MET ASP HIS THR LEU LEU GLY SEQRES 22 B 353 ASP ALA VAL ASN VAL ALA ALA ARG LEU GLU ALA LEU THR SEQRES 23 B 353 ARG GLN LEU PRO TYR ALA LEU ALA PHE THR ALA GLY VAL SEQRES 24 B 353 LYS LYS CYS CYS GLN ALA GLN TRP THR PHE ILE ASN LEU SEQRES 25 B 353 GLY ALA HIS GLN VAL LYS GLY LYS GLN GLU ALA ILE GLU SEQRES 26 B 353 VAL TYR THR VAL ASN GLU ALA GLN LYS TYR TYR ASP THR SEQRES 27 B 353 LEU GLN ILE THR GLN LEU ILE ARG GLN THR LEU GLU ASN SEQRES 28 B 353 ASP LYS HET FMN A 401 31 HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN C17 H21 N4 O9 P FORMUL 4 HOH *82(H2 O) HELIX 1 AA1 GLU A 19 ASN A 35 1 17 HELIX 2 AA2 GLU A 54 VAL A 67 1 14 HELIX 3 AA3 ASN A 99 ASN A 101 5 3 HELIX 4 AA4 ILE A 106 LYS A 125 1 20 HELIX 5 AA5 PRO A 128 GLN A 137 1 10 HELIX 6 AA6 ASN A 140 VAL A 144 5 5 HELIX 7 AA7 ALA A 160 LEU A 168 1 9 HELIX 8 AA8 PRO A 169 TYR A 191 1 23 HELIX 9 AA9 GLN A 211 VAL A 233 1 23 HELIX 10 AB1 ASN A 237 LEU A 242 5 6 HELIX 11 AB2 GLY A 270 THR A 283 1 14 HELIX 12 AB3 ALA A 294 CYS A 299 1 6 HELIX 13 AB4 GLU A 328 GLN A 330 5 3 HELIX 14 AB5 ASP A 334 LEU A 346 1 13 HELIX 15 AB6 GLU B 18 ASN B 35 1 18 HELIX 16 AB7 GLU B 54 ASP B 68 1 15 HELIX 17 AB8 GLU B 103 MET B 105 5 3 HELIX 18 AB9 ILE B 106 GLU B 124 1 19 HELIX 19 AC1 LYS B 125 MET B 127 5 3 HELIX 20 AC2 PRO B 128 GLN B 137 1 10 HELIX 21 AC3 ALA B 160 LEU B 168 1 9 HELIX 22 AC4 PRO B 169 TYR B 191 1 23 HELIX 23 AC5 GLN B 211 VAL B 233 1 23 HELIX 24 AC6 ASN B 237 LEU B 242 5 6 HELIX 25 AC7 GLY B 270 THR B 283 1 14 HELIX 26 AC8 ARG B 284 LEU B 286 5 3 HELIX 27 AC9 ALA B 294 LYS B 298 1 5 HELIX 28 AD1 GLU B 328 GLN B 330 5 3 HELIX 29 AD2 ASP B 334 LEU B 346 1 13 SHEET 1 AA1 5 HIS A 71 TYR A 81 0 SHEET 2 AA1 5 LYS A 3 ILE A 11 -1 N ARG A 4 O GLU A 80 SHEET 3 AA1 5 LEU A 46 GLY A 53 -1 O GLY A 53 N LYS A 3 SHEET 4 AA1 5 ILE A 36 LEU A 43 -1 N THR A 37 O GLU A 52 SHEET 5 AA1 5 LYS A 94 ASN A 97 1 O ILE A 96 N LEU A 40 SHEET 1 AA2 5 GLU A 194 ILE A 199 0 SHEET 2 AA2 5 CYS A 202 THR A 208 -1 O MET A 204 N THR A 196 SHEET 3 AA2 5 GLN A 147 ILE A 158 -1 N PHE A 154 O ALA A 205 SHEET 4 AA2 5 THR A 244 SER A 260 -1 O VAL A 253 N VAL A 149 SHEET 5 AA2 5 LYS A 263 LEU A 269 -1 O ASP A 265 N MET A 258 SHEET 1 AA3 7 GLU A 194 ILE A 199 0 SHEET 2 AA3 7 CYS A 202 THR A 208 -1 O MET A 204 N THR A 196 SHEET 3 AA3 7 GLN A 147 ILE A 158 -1 N PHE A 154 O ALA A 205 SHEET 4 AA3 7 THR A 244 SER A 260 -1 O VAL A 253 N VAL A 149 SHEET 5 AA3 7 LEU A 290 THR A 293 1 O ALA A 291 N ILE A 246 SHEET 6 AA3 7 ILE A 321 VAL A 326 -1 O TYR A 324 N PHE A 292 SHEET 7 AA3 7 PHE A 306 HIS A 312 -1 N LEU A 309 O VAL A 323 SHEET 1 AA4 5 THR B 72 TYR B 81 0 SHEET 2 AA4 5 LYS B 3 LYS B 10 -1 N LYS B 10 O THR B 72 SHEET 3 AA4 5 LEU B 46 GLY B 53 -1 O GLY B 53 N LYS B 3 SHEET 4 AA4 5 THR B 37 LEU B 43 -1 N LEU B 41 O PHE B 48 SHEET 5 AA4 5 LYS B 94 ASN B 97 1 O ILE B 96 N LEU B 40 SHEET 1 AA5 5 GLU B 194 ILE B 199 0 SHEET 2 AA5 5 CYS B 202 THR B 208 -1 O MET B 204 N THR B 196 SHEET 3 AA5 5 GLN B 147 ILE B 158 -1 N PHE B 154 O ALA B 205 SHEET 4 AA5 5 THR B 244 SER B 260 -1 O GLU B 255 N GLN B 147 SHEET 5 AA5 5 LYS B 263 LEU B 269 -1 O ASP B 265 N MET B 258 SHEET 1 AA6 7 GLU B 194 ILE B 199 0 SHEET 2 AA6 7 CYS B 202 THR B 208 -1 O MET B 204 N THR B 196 SHEET 3 AA6 7 GLN B 147 ILE B 158 -1 N PHE B 154 O ALA B 205 SHEET 4 AA6 7 THR B 244 SER B 260 -1 O GLU B 255 N GLN B 147 SHEET 5 AA6 7 LEU B 290 THR B 293 1 O ALA B 291 N ILE B 246 SHEET 6 AA6 7 ILE B 321 VAL B 326 -1 O TYR B 324 N PHE B 292 SHEET 7 AA6 7 PHE B 306 HIS B 312 -1 N ILE B 307 O THR B 325 SITE 1 AC1 14 ILE A 23 SER A 27 ASN A 30 ASN A 31 SITE 2 AC1 14 PHE A 47 GLN A 49 LEU A 51 LEU A 61 SITE 3 AC1 14 LYS A 64 ILE A 65 ASP A 68 ARG A 70 SITE 4 AC1 14 MET A 93 HOH A 507 CRYST1 47.660 57.070 71.310 82.42 75.79 76.88 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020982 -0.004890 -0.004935 0.00000 SCALE2 0.000000 0.017992 -0.001455 0.00000 SCALE3 0.000000 0.000000 0.014513 0.00000