HEADER HYDROLASE 09-NOV-16 5MBZ TITLE CRYSTAL STRUCTURE OF SER202PHE MUTANT OF HUMAN PROLIDASE WITH MN IONS TITLE 2 AND GLYPRO LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: XAA-PRO DIPEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: X-PRO DIPEPTIDASE,IMIDODIPEPTIDASE,PEPTIDASE D,PROLINE COMPND 5 DIPEPTIDASE,PROLIDASE; COMPND 6 EC: 3.4.13.9; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PEPD, PRD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PROLIDASE, PEPTIDASE, HYDROLYSIS, PITA-BREAD, METALLOENZYME, KEYWDS 2 MUTATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.WILK,U.MUELLER,H.DOBBEK,M.S.WEISS REVDAT 5 17-JAN-24 5MBZ 1 LINK REVDAT 4 22-APR-20 5MBZ 1 REMARK REVDAT 3 26-SEP-18 5MBZ 1 JRNL REVDAT 2 15-AUG-18 5MBZ 1 JRNL REVDAT 1 20-DEC-17 5MBZ 0 JRNL AUTH P.WILK,M.UEHLEIN,R.PIWOWARCZYK,H.DOBBEK,U.MUELLER,M.S.WEISS JRNL TITL STRUCTURAL BASIS FOR PROLIDASE DEFICIENCY DISEASE JRNL TITL 2 MECHANISMS. JRNL REF FEBS J. V. 285 3422 2018 JRNL REFN ISSN 1742-4658 JRNL PMID 30066404 JRNL DOI 10.1111/FEBS.14620 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 191280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8090 - 4.6569 1.00 6353 335 0.1652 0.1702 REMARK 3 2 4.6569 - 3.6968 1.00 6198 327 0.1206 0.1417 REMARK 3 3 3.6968 - 3.2296 1.00 6124 322 0.1278 0.1483 REMARK 3 4 3.2296 - 2.9344 1.00 6156 324 0.1340 0.1620 REMARK 3 5 2.9344 - 2.7241 1.00 6082 320 0.1338 0.1743 REMARK 3 6 2.7241 - 2.5635 1.00 6081 320 0.1350 0.1595 REMARK 3 7 2.5635 - 2.4351 1.00 6090 321 0.1303 0.1693 REMARK 3 8 2.4351 - 2.3291 1.00 6042 318 0.1233 0.1338 REMARK 3 9 2.3291 - 2.2395 1.00 6112 321 0.1298 0.1582 REMARK 3 10 2.2395 - 2.1622 1.00 6036 318 0.1325 0.1630 REMARK 3 11 2.1622 - 2.0946 1.00 6082 320 0.1372 0.1694 REMARK 3 12 2.0946 - 2.0347 1.00 6014 317 0.1368 0.1706 REMARK 3 13 2.0347 - 1.9811 1.00 6076 319 0.1414 0.1666 REMARK 3 14 1.9811 - 1.9328 1.00 6030 318 0.1537 0.1729 REMARK 3 15 1.9328 - 1.8889 1.00 6041 318 0.1595 0.1839 REMARK 3 16 1.8889 - 1.8487 1.00 6027 317 0.1622 0.2177 REMARK 3 17 1.8487 - 1.8117 1.00 6026 317 0.1690 0.2054 REMARK 3 18 1.8117 - 1.7775 1.00 6034 318 0.1700 0.2083 REMARK 3 19 1.7775 - 1.7457 1.00 6038 317 0.1785 0.2145 REMARK 3 20 1.7457 - 1.7161 1.00 6044 319 0.1915 0.1973 REMARK 3 21 1.7161 - 1.6885 1.00 6001 315 0.1997 0.2425 REMARK 3 22 1.6885 - 1.6625 1.00 6001 316 0.2058 0.2406 REMARK 3 23 1.6625 - 1.6380 1.00 6067 320 0.2178 0.2579 REMARK 3 24 1.6380 - 1.6150 1.00 6000 315 0.2253 0.2419 REMARK 3 25 1.6150 - 1.5931 1.00 6021 317 0.2347 0.2745 REMARK 3 26 1.5931 - 1.5724 1.00 6019 317 0.2378 0.2617 REMARK 3 27 1.5724 - 1.5528 1.00 5962 314 0.2427 0.2837 REMARK 3 28 1.5528 - 1.5341 1.00 6073 320 0.2583 0.2980 REMARK 3 29 1.5341 - 1.5162 1.00 5982 314 0.2692 0.3105 REMARK 3 30 1.5162 - 1.4992 0.98 5903 311 0.2770 0.2774 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7922 REMARK 3 ANGLE : 1.240 10747 REMARK 3 CHIRALITY : 0.074 1166 REMARK 3 PLANARITY : 0.007 1409 REMARK 3 DIHEDRAL : 13.358 2955 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5178 19.9504 94.1789 REMARK 3 T TENSOR REMARK 3 T11: 0.2439 T22: 0.1664 REMARK 3 T33: 0.1321 T12: 0.0088 REMARK 3 T13: 0.0350 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.4567 L22: 1.0508 REMARK 3 L33: 0.7436 L12: -0.0448 REMARK 3 L13: 0.0359 L23: -0.2471 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: -0.0562 S13: 0.0376 REMARK 3 S21: 0.3203 S22: 0.0130 S23: 0.0580 REMARK 3 S31: -0.1008 S32: -0.0369 S33: -0.0117 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5229 11.6076 66.8935 REMARK 3 T TENSOR REMARK 3 T11: 0.3485 T22: 0.2769 REMARK 3 T33: 0.2961 T12: -0.0392 REMARK 3 T13: 0.0230 T23: -0.0514 REMARK 3 L TENSOR REMARK 3 L11: 2.4747 L22: 1.0748 REMARK 3 L33: 0.2085 L12: -0.9447 REMARK 3 L13: -0.5863 L23: -0.0464 REMARK 3 S TENSOR REMARK 3 S11: 0.1452 S12: -0.4375 S13: 0.3245 REMARK 3 S21: 0.2329 S22: 0.1227 S23: -0.3594 REMARK 3 S31: -0.1359 S32: 0.2075 S33: -0.2417 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 274 THROUGH 445 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8226 -5.1573 75.6997 REMARK 3 T TENSOR REMARK 3 T11: 0.1106 T22: 0.1325 REMARK 3 T33: 0.1268 T12: -0.0100 REMARK 3 T13: -0.0016 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.6534 L22: 1.3654 REMARK 3 L33: 0.9980 L12: -0.2642 REMARK 3 L13: -0.1862 L23: 0.5116 REMARK 3 S TENSOR REMARK 3 S11: 0.0008 S12: 0.0250 S13: -0.1027 REMARK 3 S21: 0.0788 S22: 0.0219 S23: -0.0651 REMARK 3 S31: 0.0570 S32: 0.0556 S33: -0.0241 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 446 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4332 3.0259 70.3112 REMARK 3 T TENSOR REMARK 3 T11: 0.1315 T22: 0.1807 REMARK 3 T33: 0.1822 T12: 0.0030 REMARK 3 T13: -0.0160 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 1.3745 L22: 1.3626 REMARK 3 L33: 1.8584 L12: 0.4383 REMARK 3 L13: -0.4823 L23: -0.1813 REMARK 3 S TENSOR REMARK 3 S11: -0.0620 S12: 0.2039 S13: 0.0671 REMARK 3 S21: -0.0381 S22: -0.0312 S23: 0.2777 REMARK 3 S31: -0.1335 S32: -0.2835 S33: 0.0786 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 8 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5553 28.5766 71.2599 REMARK 3 T TENSOR REMARK 3 T11: 0.1338 T22: 0.1409 REMARK 3 T33: 0.1640 T12: 0.0049 REMARK 3 T13: 0.0239 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.9067 L22: 1.0351 REMARK 3 L33: 0.4289 L12: 0.0976 REMARK 3 L13: 0.0426 L23: 0.1387 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.0185 S13: -0.0728 REMARK 3 S21: -0.0712 S22: 0.0512 S23: -0.2451 REMARK 3 S31: 0.0157 S32: 0.0507 S33: -0.0449 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 237 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0362 34.7361 78.5856 REMARK 3 T TENSOR REMARK 3 T11: 0.3177 T22: 0.3465 REMARK 3 T33: 0.5042 T12: 0.0302 REMARK 3 T13: 0.0149 T23: 0.0894 REMARK 3 L TENSOR REMARK 3 L11: 0.0279 L22: 0.0755 REMARK 3 L33: 1.7608 L12: 0.0622 REMARK 3 L13: 0.1170 L23: 0.0286 REMARK 3 S TENSOR REMARK 3 S11: -0.2633 S12: -0.3865 S13: -0.1048 REMARK 3 S21: 0.3197 S22: 0.1650 S23: -0.1886 REMARK 3 S31: 0.1821 S32: 0.4787 S33: 0.0537 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 438 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9431 51.8328 76.4075 REMARK 3 T TENSOR REMARK 3 T11: 0.1404 T22: 0.1502 REMARK 3 T33: 0.1687 T12: 0.0229 REMARK 3 T13: -0.0054 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.3201 L22: 1.3246 REMARK 3 L33: 0.4175 L12: -0.3264 REMARK 3 L13: -0.1444 L23: 0.0821 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: -0.1269 S13: 0.1842 REMARK 3 S21: 0.0179 S22: 0.0368 S23: 0.1372 REMARK 3 S31: -0.0878 S32: -0.0396 S33: -0.0155 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 439 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0729 48.0129 67.2370 REMARK 3 T TENSOR REMARK 3 T11: 0.2029 T22: 0.1692 REMARK 3 T33: 0.2439 T12: 0.0212 REMARK 3 T13: -0.0489 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 2.3832 L22: 1.0972 REMARK 3 L33: 0.5807 L12: 0.2660 REMARK 3 L13: -0.1297 L23: -0.2787 REMARK 3 S TENSOR REMARK 3 S11: 0.0944 S12: 0.1798 S13: 0.2344 REMARK 3 S21: -0.2439 S22: 0.0036 S23: 0.3058 REMARK 3 S31: -0.0471 S32: -0.1303 S33: -0.0911 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 2 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5576 4.6045 78.3683 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.1903 REMARK 3 T33: 0.1803 T12: -0.0141 REMARK 3 T13: -0.0234 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 2.0002 L22: 2.0001 REMARK 3 L33: 2.0000 L12: 2.0002 REMARK 3 L13: 2.0001 L23: 2.0000 REMARK 3 S TENSOR REMARK 3 S11: -0.1871 S12: 0.3055 S13: -0.0536 REMARK 3 S21: -0.1295 S22: 0.0453 S23: 0.0147 REMARK 3 S31: -0.1266 S32: -0.0322 S33: 0.1418 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 2 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4865 43.2333 78.3671 REMARK 3 T TENSOR REMARK 3 T11: 0.1859 T22: 0.2186 REMARK 3 T33: 0.2359 T12: -0.0234 REMARK 3 T13: 0.0468 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.9999 L22: 2.0001 REMARK 3 L33: 2.0002 L12: 2.0000 REMARK 3 L13: 2.0001 L23: 1.9997 REMARK 3 S TENSOR REMARK 3 S11: 0.1779 S12: 0.0486 S13: -0.1917 REMARK 3 S21: -0.0504 S22: 0.1324 S23: -0.0344 REMARK 3 S31: -0.1399 S32: -0.2799 S33: -0.3180 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MBZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002237. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6-8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR SI REMARK 200 -11 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 191294 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.499 REMARK 200 RESOLUTION RANGE LOW (A) : 47.934 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.410 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.56 REMARK 200 R MERGE FOR SHELL (I) : 1.10000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 5M4J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM NABORATE, 690-760MM NACITRATE, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.15800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.15800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.89250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.47250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 51.89250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.47250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.15800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.89250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.47250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.15800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 51.89250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.47250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 730 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 241 REMARK 465 THR A 242 REMARK 465 CYS A 243 REMARK 465 SER B 240 REMARK 465 TYR B 241 REMARK 465 THR B 242 REMARK 465 GLY B 257 REMARK 465 HIS B 258 REMARK 465 PHE B 489 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C GLY B 503 N PRO B 504 1.34 REMARK 500 C GLY A 503 N PRO A 504 1.34 REMARK 500 NH2 ARG A 331 O HOH A 602 2.09 REMARK 500 O HOH B 860 O HOH B 1052 2.17 REMARK 500 O HOH B 1165 O HOH B 1173 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 314 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 -124.47 49.82 REMARK 500 TYR A 57 -126.24 50.71 REMARK 500 ALA A 261 61.08 -162.97 REMARK 500 PRO A 262 48.74 -81.04 REMARK 500 GLU A 412 58.73 -143.43 REMARK 500 ARG A 470 -34.04 -130.22 REMARK 500 ALA A 485 -10.23 69.53 REMARK 500 ASN B 13 -125.82 50.64 REMARK 500 TYR B 57 -128.83 49.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GLY A 503 REMARK 610 GLY B 503 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 211 O REMARK 620 2 MET A 479 O 117.1 REMARK 620 3 HOH A 750 O 94.0 94.1 REMARK 620 4 HOH A 782 O 81.8 87.0 175.7 REMARK 620 5 HOH A 997 O 160.7 81.9 87.5 96.8 REMARK 620 6 HOH A1004 O 82.0 156.5 98.2 82.2 78.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 276 OD1 REMARK 620 2 ASP A 276 OD2 63.5 REMARK 620 3 ASP A 287 OD1 81.4 144.5 REMARK 620 4 GLU A 452 OE1 103.8 112.3 79.4 REMARK 620 5 OH A 501 O 152.4 89.8 125.7 78.9 REMARK 620 6 GLY A 503 N 101.7 95.8 86.2 148.3 87.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 499 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 287 OD2 REMARK 620 2 HIS A 370 NE2 103.2 REMARK 620 3 GLU A 412 OE2 165.1 82.7 REMARK 620 4 GLU A 452 OE2 85.1 114.7 80.0 REMARK 620 5 OH A 501 O 87.8 159.5 91.0 83.1 REMARK 620 6 GLY A 503 O 92.3 87.3 101.8 157.9 74.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 508 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 432 O REMARK 620 2 LEU A 435 O 88.1 REMARK 620 3 HOH A 721 O 93.7 59.3 REMARK 620 4 HOH A 890 O 157.1 69.7 80.1 REMARK 620 5 HOH A1092 O 111.9 144.5 89.3 90.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 276 OD1 REMARK 620 2 ASP B 276 OD2 61.9 REMARK 620 3 ASP B 287 OD1 78.2 139.8 REMARK 620 4 GLU B 452 OE1 102.7 111.2 80.6 REMARK 620 5 OH B 501 O 146.5 85.6 134.6 80.4 REMARK 620 6 GLY B 503 N 100.9 94.4 88.3 151.2 89.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 499 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 287 OD2 REMARK 620 2 HIS B 370 NE2 105.4 REMARK 620 3 GLU B 412 OE2 162.6 83.2 REMARK 620 4 GLU B 452 OE2 85.4 113.0 77.3 REMARK 620 5 OH B 501 O 90.1 157.8 86.4 83.5 REMARK 620 6 GLY B 503 O 93.5 87.1 102.1 159.4 76.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OH A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PRO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OH B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PRO B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 507 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M4J RELATED DB: PDB REMARK 900 WILD-TYPE HUMAN PROLIDASE REMARK 900 RELATED ID: 5MBY RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE REMARK 900 RELATED ID: 5MC0 RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE REMARK 900 RELATED ID: 5MC1 RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE REMARK 900 RELATED ID: 5MC2 RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE REMARK 900 RELATED ID: 5MC3 RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE REMARK 900 RELATED ID: 5MC4 RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE REMARK 900 RELATED ID: 5MC5 RELATED DB: PDB REMARK 900 MUTATIONS OF HUMAN PROLIDASE DBREF 5MBZ A 6 489 UNP P12955 PEPD_HUMAN 6 489 DBREF 5MBZ B 6 489 UNP P12955 PEPD_HUMAN 6 489 SEQADV 5MBZ PHE A 202 UNP P12955 SER 202 ENGINEERED MUTATION SEQADV 5MBZ PHE B 202 UNP P12955 SER 202 ENGINEERED MUTATION SEQRES 1 A 484 GLY PRO SER PHE TRP LEU GLY ASN GLU THR LEU LYS VAL SEQRES 2 A 484 PRO LEU ALA LEU PHE ALA LEU ASN ARG GLN ARG LEU CYS SEQRES 3 A 484 GLU ARG LEU ARG LYS ASN PRO ALA VAL GLN ALA GLY SER SEQRES 4 A 484 ILE VAL VAL LEU GLN GLY GLY GLU GLU THR GLN ARG TYR SEQRES 5 A 484 CYS THR ASP THR GLY VAL LEU PHE ARG GLN GLU SER PHE SEQRES 6 A 484 PHE HIS TRP ALA PHE GLY VAL THR GLU PRO GLY CYS TYR SEQRES 7 A 484 GLY VAL ILE ASP VAL ASP THR GLY LYS SER THR LEU PHE SEQRES 8 A 484 VAL PRO ARG LEU PRO ALA SER HIS ALA THR TRP MET GLY SEQRES 9 A 484 LYS ILE HIS SER LYS GLU HIS PHE LYS GLU LYS TYR ALA SEQRES 10 A 484 VAL ASP ASP VAL GLN TYR VAL ASP GLU ILE ALA SER VAL SEQRES 11 A 484 LEU THR SER GLN LYS PRO SER VAL LEU LEU THR LEU ARG SEQRES 12 A 484 GLY VAL ASN THR ASP SER GLY SER VAL CYS ARG GLU ALA SEQRES 13 A 484 SER PHE ASP GLY ILE SER LYS PHE GLU VAL ASN ASN THR SEQRES 14 A 484 ILE LEU HIS PRO GLU ILE VAL GLU CYS ARG VAL PHE LYS SEQRES 15 A 484 THR ASP MET GLU LEU GLU VAL LEU ARG TYR THR ASN LYS SEQRES 16 A 484 ILE PHE SER GLU ALA HIS ARG GLU VAL MET LYS ALA VAL SEQRES 17 A 484 LYS VAL GLY MET LYS GLU TYR GLU LEU GLU SER LEU PHE SEQRES 18 A 484 GLU HIS TYR CYS TYR SER ARG GLY GLY MET ARG HIS SER SEQRES 19 A 484 SER TYR THR CYS ILE CYS GLY SER GLY GLU ASN SER ALA SEQRES 20 A 484 VAL LEU HIS TYR GLY HIS ALA GLY ALA PRO ASN ASP ARG SEQRES 21 A 484 THR ILE GLN ASN GLY ASP MET CYS LEU PHE ASP MET GLY SEQRES 22 A 484 GLY GLU TYR TYR CYS PHE ALA SER ASP ILE THR CYS SER SEQRES 23 A 484 PHE PRO ALA ASN GLY LYS PHE THR ALA ASP GLN LYS ALA SEQRES 24 A 484 VAL TYR GLU ALA VAL LEU ARG SER SER ARG ALA VAL MET SEQRES 25 A 484 GLY ALA MET LYS PRO GLY VAL TRP TRP PRO ASP MET HIS SEQRES 26 A 484 ARG LEU ALA ASP ARG ILE HIS LEU GLU GLU LEU ALA HIS SEQRES 27 A 484 MET GLY ILE LEU SER GLY SER VAL ASP ALA MET VAL GLN SEQRES 28 A 484 ALA HIS LEU GLY ALA VAL PHE MET PRO HIS GLY LEU GLY SEQRES 29 A 484 HIS PHE LEU GLY ILE ASP VAL HIS ASP VAL GLY GLY TYR SEQRES 30 A 484 PRO GLU GLY VAL GLU ARG ILE ASP GLU PRO GLY LEU ARG SEQRES 31 A 484 SER LEU ARG THR ALA ARG HIS LEU GLN PRO GLY MET VAL SEQRES 32 A 484 LEU THR VAL GLU PRO GLY ILE TYR PHE ILE ASP HIS LEU SEQRES 33 A 484 LEU ASP GLU ALA LEU ALA ASP PRO ALA ARG ALA SER PHE SEQRES 34 A 484 LEU ASN ARG GLU VAL LEU GLN ARG PHE ARG GLY PHE GLY SEQRES 35 A 484 GLY VAL ARG ILE GLU GLU ASP VAL VAL VAL THR ASP SER SEQRES 36 A 484 GLY ILE GLU LEU LEU THR CYS VAL PRO ARG THR VAL GLU SEQRES 37 A 484 GLU ILE GLU ALA CYS MET ALA GLY CYS ASP LYS ALA PHE SEQRES 38 A 484 THR PRO PHE SEQRES 1 B 484 GLY PRO SER PHE TRP LEU GLY ASN GLU THR LEU LYS VAL SEQRES 2 B 484 PRO LEU ALA LEU PHE ALA LEU ASN ARG GLN ARG LEU CYS SEQRES 3 B 484 GLU ARG LEU ARG LYS ASN PRO ALA VAL GLN ALA GLY SER SEQRES 4 B 484 ILE VAL VAL LEU GLN GLY GLY GLU GLU THR GLN ARG TYR SEQRES 5 B 484 CYS THR ASP THR GLY VAL LEU PHE ARG GLN GLU SER PHE SEQRES 6 B 484 PHE HIS TRP ALA PHE GLY VAL THR GLU PRO GLY CYS TYR SEQRES 7 B 484 GLY VAL ILE ASP VAL ASP THR GLY LYS SER THR LEU PHE SEQRES 8 B 484 VAL PRO ARG LEU PRO ALA SER HIS ALA THR TRP MET GLY SEQRES 9 B 484 LYS ILE HIS SER LYS GLU HIS PHE LYS GLU LYS TYR ALA SEQRES 10 B 484 VAL ASP ASP VAL GLN TYR VAL ASP GLU ILE ALA SER VAL SEQRES 11 B 484 LEU THR SER GLN LYS PRO SER VAL LEU LEU THR LEU ARG SEQRES 12 B 484 GLY VAL ASN THR ASP SER GLY SER VAL CYS ARG GLU ALA SEQRES 13 B 484 SER PHE ASP GLY ILE SER LYS PHE GLU VAL ASN ASN THR SEQRES 14 B 484 ILE LEU HIS PRO GLU ILE VAL GLU CYS ARG VAL PHE LYS SEQRES 15 B 484 THR ASP MET GLU LEU GLU VAL LEU ARG TYR THR ASN LYS SEQRES 16 B 484 ILE PHE SER GLU ALA HIS ARG GLU VAL MET LYS ALA VAL SEQRES 17 B 484 LYS VAL GLY MET LYS GLU TYR GLU LEU GLU SER LEU PHE SEQRES 18 B 484 GLU HIS TYR CYS TYR SER ARG GLY GLY MET ARG HIS SER SEQRES 19 B 484 SER TYR THR CYS ILE CYS GLY SER GLY GLU ASN SER ALA SEQRES 20 B 484 VAL LEU HIS TYR GLY HIS ALA GLY ALA PRO ASN ASP ARG SEQRES 21 B 484 THR ILE GLN ASN GLY ASP MET CYS LEU PHE ASP MET GLY SEQRES 22 B 484 GLY GLU TYR TYR CYS PHE ALA SER ASP ILE THR CYS SER SEQRES 23 B 484 PHE PRO ALA ASN GLY LYS PHE THR ALA ASP GLN LYS ALA SEQRES 24 B 484 VAL TYR GLU ALA VAL LEU ARG SER SER ARG ALA VAL MET SEQRES 25 B 484 GLY ALA MET LYS PRO GLY VAL TRP TRP PRO ASP MET HIS SEQRES 26 B 484 ARG LEU ALA ASP ARG ILE HIS LEU GLU GLU LEU ALA HIS SEQRES 27 B 484 MET GLY ILE LEU SER GLY SER VAL ASP ALA MET VAL GLN SEQRES 28 B 484 ALA HIS LEU GLY ALA VAL PHE MET PRO HIS GLY LEU GLY SEQRES 29 B 484 HIS PHE LEU GLY ILE ASP VAL HIS ASP VAL GLY GLY TYR SEQRES 30 B 484 PRO GLU GLY VAL GLU ARG ILE ASP GLU PRO GLY LEU ARG SEQRES 31 B 484 SER LEU ARG THR ALA ARG HIS LEU GLN PRO GLY MET VAL SEQRES 32 B 484 LEU THR VAL GLU PRO GLY ILE TYR PHE ILE ASP HIS LEU SEQRES 33 B 484 LEU ASP GLU ALA LEU ALA ASP PRO ALA ARG ALA SER PHE SEQRES 34 B 484 LEU ASN ARG GLU VAL LEU GLN ARG PHE ARG GLY PHE GLY SEQRES 35 B 484 GLY VAL ARG ILE GLU GLU ASP VAL VAL VAL THR ASP SER SEQRES 36 B 484 GLY ILE GLU LEU LEU THR CYS VAL PRO ARG THR VAL GLU SEQRES 37 B 484 GLU ILE GLU ALA CYS MET ALA GLY CYS ASP LYS ALA PHE SEQRES 38 B 484 THR PRO PHE HET MN A 499 1 HET MN A 500 1 HET OH A 501 1 HET GLY A 503 4 HET PRO A 504 8 HET GOL A 505 6 HET GOL A 506 12 HET NA A 507 1 HET NA A 508 1 HET MN B 499 1 HET MN B 500 1 HET OH B 501 1 HET GLY B 503 4 HET PRO B 504 8 HET GOL B 505 6 HET GOL B 506 6 HET CL B 507 1 HETNAM MN MANGANESE (II) ION HETNAM OH HYDROXIDE ION HETNAM GLY GLYCINE HETNAM PRO PROLINE HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MN 4(MN 2+) FORMUL 5 OH 2(H O 1-) FORMUL 6 GLY 2(C2 H5 N O2) FORMUL 7 PRO 2(C5 H9 N O2) FORMUL 8 GOL 4(C3 H8 O3) FORMUL 10 NA 2(NA 1+) FORMUL 19 CL CL 1- FORMUL 20 HOH *1126(H2 O) HELIX 1 AA1 LEU A 20 ASN A 37 1 18 HELIX 2 AA2 GLU A 68 GLY A 76 1 9 HELIX 3 AA3 SER A 103 MET A 108 1 6 HELIX 4 AA4 SER A 113 ALA A 122 1 10 HELIX 5 AA5 GLU A 131 LYS A 140 1 10 HELIX 6 AA6 GLY A 165 PHE A 169 5 5 HELIX 7 AA7 ILE A 175 PHE A 186 1 12 HELIX 8 AA8 THR A 188 VAL A 213 1 26 HELIX 9 AA9 LYS A 218 GLY A 235 1 18 HELIX 10 AB1 GLU A 249 VAL A 253 5 5 HELIX 11 AB2 THR A 299 MET A 320 1 22 HELIX 12 AB3 TRP A 325 MET A 344 1 20 HELIX 13 AB4 SER A 350 ALA A 357 1 8 HELIX 14 AB5 LEU A 359 MET A 364 1 6 HELIX 15 AB6 GLY A 393 LEU A 397 5 5 HELIX 16 AB7 ILE A 418 ASP A 428 1 11 HELIX 17 AB8 ASP A 428 SER A 433 1 6 HELIX 18 AB9 ASN A 436 GLN A 441 1 6 HELIX 19 AC1 ARG A 442 ARG A 444 5 3 HELIX 20 AC2 THR A 471 GLY A 481 1 11 HELIX 21 AC3 LEU B 20 LYS B 36 1 17 HELIX 22 AC4 GLU B 68 GLY B 76 1 9 HELIX 23 AC5 SER B 103 MET B 108 1 6 HELIX 24 AC6 SER B 113 ALA B 122 1 10 HELIX 25 AC7 GLU B 131 LYS B 140 1 10 HELIX 26 AC8 GLY B 165 PHE B 169 5 5 HELIX 27 AC9 ILE B 175 PHE B 186 1 12 HELIX 28 AD1 THR B 188 VAL B 213 1 26 HELIX 29 AD2 LYS B 218 GLY B 235 1 18 HELIX 30 AD3 GLU B 249 VAL B 253 5 5 HELIX 31 AD4 THR B 299 MET B 320 1 22 HELIX 32 AD5 TRP B 325 MET B 344 1 20 HELIX 33 AD6 SER B 350 ALA B 357 1 8 HELIX 34 AD7 LEU B 359 MET B 364 1 6 HELIX 35 AD8 GLY B 393 LEU B 397 5 5 HELIX 36 AD9 ILE B 418 ALA B 427 1 10 HELIX 37 AE1 ARG B 431 LEU B 435 5 5 HELIX 38 AE2 ASN B 436 GLN B 441 1 6 HELIX 39 AE3 ARG B 442 ARG B 444 5 3 HELIX 40 AE4 THR B 471 ALA B 480 1 10 SHEET 1 AA1 2 SER A 8 PHE A 9 0 SHEET 2 AA1 2 VAL A 18 PRO A 19 -1 O VAL A 18 N PHE A 9 SHEET 1 AA2 6 ASP A 125 TYR A 128 0 SHEET 2 AA2 6 SER A 93 VAL A 97 1 N VAL A 97 O GLN A 127 SHEET 3 AA2 6 TYR A 83 ASP A 87 -1 N TYR A 83 O PHE A 96 SHEET 4 AA2 6 ILE A 45 GLN A 49 -1 N LEU A 48 O GLY A 84 SHEET 5 AA2 6 LEU A 144 LEU A 145 1 O LEU A 145 N ILE A 45 SHEET 6 AA2 6 VAL A 171 ASN A 172 1 O ASN A 172 N LEU A 144 SHEET 1 AA3 3 CYS A 245 SER A 247 0 SHEET 2 AA3 3 MET A 272 TYR A 281 -1 O LEU A 274 N GLY A 246 SHEET 3 AA3 3 PHE A 284 PRO A 293 -1 O ILE A 288 N MET A 277 SHEET 1 AA4 3 VAL A 408 VAL A 411 0 SHEET 2 AA4 3 GLU A 453 VAL A 457 -1 O VAL A 455 N LEU A 409 SHEET 3 AA4 3 ILE A 462 LEU A 464 -1 O GLU A 463 N VAL A 456 SHEET 1 AA5 2 GLY A 414 TYR A 416 0 SHEET 2 AA5 2 GLY A 448 ARG A 450 -1 O VAL A 449 N ILE A 415 SHEET 1 AA6 2 SER B 8 PHE B 9 0 SHEET 2 AA6 2 VAL B 18 PRO B 19 -1 O VAL B 18 N PHE B 9 SHEET 1 AA7 6 ASP B 125 TYR B 128 0 SHEET 2 AA7 6 SER B 93 VAL B 97 1 N VAL B 97 O GLN B 127 SHEET 3 AA7 6 TYR B 83 ASP B 87 -1 N TYR B 83 O PHE B 96 SHEET 4 AA7 6 SER B 44 GLN B 49 -1 N LEU B 48 O GLY B 84 SHEET 5 AA7 6 VAL B 143 LEU B 145 1 O LEU B 145 N ILE B 45 SHEET 6 AA7 6 VAL B 171 ASN B 172 1 O ASN B 172 N LEU B 144 SHEET 1 AA8 3 ILE B 244 SER B 247 0 SHEET 2 AA8 3 MET B 272 TYR B 281 -1 O ASP B 276 N ILE B 244 SHEET 3 AA8 3 PHE B 284 PRO B 293 -1 O PHE B 292 N CYS B 273 SHEET 1 AA9 3 VAL B 408 VAL B 411 0 SHEET 2 AA9 3 GLU B 453 VAL B 457 -1 O VAL B 455 N LEU B 409 SHEET 3 AA9 3 ILE B 462 LEU B 464 -1 O GLU B 463 N VAL B 456 SHEET 1 AB1 2 GLY B 414 TYR B 416 0 SHEET 2 AB1 2 GLY B 448 ARG B 450 -1 O VAL B 449 N ILE B 415 SSBOND 1 CYS A 482 CYS A 482 1555 3555 2.04 SSBOND 2 CYS B 482 CYS B 482 1555 3555 2.01 LINK O LYS A 211 NA NA A 507 1555 1555 2.63 LINK OD1 ASP A 276 MN MN A 500 1555 1555 1.99 LINK OD2 ASP A 276 MN MN A 500 1555 1555 2.16 LINK OD2 ASP A 287 MN MN A 499 1555 1555 2.25 LINK OD1 ASP A 287 MN MN A 500 1555 1555 2.42 LINK NE2 HIS A 370 MN MN A 499 1555 1555 2.30 LINK OE2 GLU A 412 MN MN A 499 1555 1555 2.30 LINK O ALA A 432 NA NA A 508 1555 1555 2.53 LINK O LEU A 435 NA NA A 508 1555 1555 2.39 LINK OE2 GLU A 452 MN MN A 499 1555 1555 2.30 LINK OE1 GLU A 452 MN MN A 500 1555 1555 2.52 LINK O MET A 479 NA NA A 507 1555 1555 2.51 LINK MN MN A 499 O OH A 501 1555 1555 2.40 LINK MN MN A 499 O GLY A 503 1555 1555 2.39 LINK MN MN A 500 O OH A 501 1555 1555 1.73 LINK MN MN A 500 N GLY A 503 1555 1555 2.78 LINK NA NA A 507 O HOH A 750 1555 1555 2.30 LINK NA NA A 507 O HOH A 782 1555 1555 2.38 LINK NA NA A 507 O HOH A 997 1555 1555 2.33 LINK NA NA A 507 O HOH A1004 1555 1555 2.64 LINK NA NA A 508 O HOH A 721 1555 1555 3.00 LINK NA NA A 508 O HOH A 890 1555 1555 2.80 LINK NA NA A 508 O HOH A1092 1555 1555 2.63 LINK OD1 ASP B 276 MN MN B 500 1555 1555 2.06 LINK OD2 ASP B 276 MN MN B 500 1555 1555 2.19 LINK OD2 ASP B 287 MN MN B 499 1555 1555 2.29 LINK OD1 ASP B 287 MN MN B 500 1555 1555 2.36 LINK NE2 HIS B 370 MN MN B 499 1555 1555 2.34 LINK OE2 GLU B 412 MN MN B 499 1555 1555 2.35 LINK OE2 GLU B 452 MN MN B 499 1555 1555 2.26 LINK OE1 GLU B 452 MN MN B 500 1555 1555 2.45 LINK MN MN B 499 O OH B 501 1555 1555 2.43 LINK MN MN B 499 O GLY B 503 1555 1555 2.50 LINK MN MN B 500 O OH B 501 1555 1555 1.85 LINK MN MN B 500 N GLY B 503 1555 1555 2.64 SITE 1 AC1 7 ASP A 287 HIS A 370 GLU A 412 GLU A 452 SITE 2 AC1 7 MN A 500 OH A 501 GLY A 503 SITE 1 AC2 7 ASP A 276 ASP A 287 THR A 289 GLU A 452 SITE 2 AC2 7 MN A 499 OH A 501 GLY A 503 SITE 1 AC3 8 ASP A 276 ASP A 287 GLU A 412 GLU A 452 SITE 2 AC3 8 MN A 499 MN A 500 GLY A 503 PRO A 504 SITE 1 AC4 11 ASP A 276 ASP A 287 HIS A 370 HIS A 377 SITE 2 AC4 11 GLU A 412 MN A 499 MN A 500 OH A 501 SITE 3 AC4 11 PRO A 504 HOH A 718 HOH A 885 SITE 1 AC5 9 HIS A 255 HIS A 366 HIS A 377 ARG A 398 SITE 2 AC5 9 GLU A 412 OH A 501 GLY A 503 HOH A 726 SITE 3 AC5 9 HOH A 833 SITE 1 AC6 2 GLU A 387 ARG A 388 SITE 1 AC7 4 HIS A 112 LYS A 120 HOH A 821 HOH A 976 SITE 1 AC8 6 LYS A 211 MET A 479 HOH A 750 HOH A 782 SITE 2 AC8 6 HOH A 997 HOH A1004 SITE 1 AC9 5 ALA A 432 LEU A 435 HOH A 721 HOH A 890 SITE 2 AC9 5 HOH A1092 SITE 1 AD1 7 ASP B 287 HIS B 370 GLU B 412 GLU B 452 SITE 2 AD1 7 MN B 500 OH B 501 GLY B 503 SITE 1 AD2 7 ASP B 276 ASP B 287 THR B 289 GLU B 452 SITE 2 AD2 7 MN B 499 OH B 501 GLY B 503 SITE 1 AD3 8 ASP B 276 ASP B 287 GLU B 412 GLU B 452 SITE 2 AD3 8 MN B 499 MN B 500 GLY B 503 PRO B 504 SITE 1 AD4 8 ASP B 276 ASP B 287 HIS B 370 HIS B 377 SITE 2 AD4 8 MN B 499 MN B 500 OH B 501 PRO B 504 SITE 1 AD5 9 HIS B 255 HIS B 366 HIS B 377 ARG B 398 SITE 2 AD5 9 GLU B 412 OH B 501 GLY B 503 HOH B 706 SITE 3 AD5 9 HOH B 787 SITE 1 AD6 3 ARG B 148 ASN B 173 THR B 174 SITE 1 AD7 3 GLU B 387 ARG B 388 HOH B 876 SITE 1 AD8 3 ARG B 437 GLN B 441 ARG B 444 CRYST1 103.785 106.945 216.316 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009351 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004623 0.00000