HEADER SUGAR BINDING PROTEIN 09-NOV-16 5MCA TITLE CRYSTAL STRUCTURE OF FIMH-LD R60P VARIANT IN THE APO STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FIMH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: FIMH, B4320, JW4283; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PTRC99A KEYWDS FIMH, TYPE 1 PILUS, PILUS, UTI, URINARY TRACT INFECTION, BLADDER, KEYWDS 2 ESCHERICHIA COLI, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.P.JAKOB,S.RABBANI,B.ERNST,T.MAIER REVDAT 3 17-JAN-24 5MCA 1 REMARK REVDAT 2 14-FEB-18 5MCA 1 JRNL REVDAT 1 06-DEC-17 5MCA 0 JRNL AUTH S.RABBANI,B.FIEGE,D.ERIS,M.SILBERMANN,R.P.JAKOB,G.NAVARRA, JRNL AUTH 2 T.MAIER,B.ERNST JRNL TITL CONFORMATIONAL SWITCH OF THE BACTERIAL ADHESIN FIMH IN THE JRNL TITL 2 ABSENCE OF THE REGULATORY DOMAIN: ENGINEERING A MINIMALISTIC JRNL TITL 3 ALLOSTERIC SYSTEM. JRNL REF J. BIOL. CHEM. V. 293 1835 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29180452 JRNL DOI 10.1074/JBC.M117.802942 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10PRE_2131: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 46222 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8120 - 4.1238 0.99 2581 125 0.1414 0.1372 REMARK 3 2 4.1238 - 3.2735 1.00 2600 144 0.1231 0.1557 REMARK 3 3 3.2735 - 2.8598 1.00 2574 148 0.1414 0.1510 REMARK 3 4 2.8598 - 2.5984 1.00 2595 141 0.1439 0.1940 REMARK 3 5 2.5984 - 2.4122 1.00 2604 129 0.1456 0.1646 REMARK 3 6 2.4122 - 2.2700 1.00 2583 109 0.1312 0.1769 REMARK 3 7 2.2700 - 2.1563 1.00 2596 123 0.1413 0.2086 REMARK 3 8 2.1563 - 2.0624 1.00 2614 151 0.1387 0.1668 REMARK 3 9 2.0624 - 1.9830 1.00 2566 161 0.1492 0.1766 REMARK 3 10 1.9830 - 1.9146 1.00 2565 144 0.1552 0.2177 REMARK 3 11 1.9146 - 1.8547 1.00 2581 165 0.1682 0.1957 REMARK 3 12 1.8547 - 1.8017 0.99 2582 112 0.1646 0.2334 REMARK 3 13 1.8017 - 1.7543 1.00 2563 172 0.1766 0.2427 REMARK 3 14 1.7543 - 1.7115 1.00 2597 140 0.2013 0.2219 REMARK 3 15 1.7115 - 1.6726 1.00 2628 155 0.2137 0.2603 REMARK 3 16 1.6726 - 1.6370 1.00 2585 118 0.2267 0.2750 REMARK 3 17 1.6370 - 1.6042 0.95 2472 99 0.2416 0.3039 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1240 REMARK 3 ANGLE : 0.901 1711 REMARK 3 CHIRALITY : 0.059 199 REMARK 3 PLANARITY : 0.007 222 REMARK 3 DIHEDRAL : 11.158 723 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9525 12.3396 73.3879 REMARK 3 T TENSOR REMARK 3 T11: 0.1475 T22: 0.1324 REMARK 3 T33: 0.1670 T12: 0.0200 REMARK 3 T13: -0.0066 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.1986 L22: 3.1476 REMARK 3 L33: 2.3073 L12: 0.8875 REMARK 3 L13: -0.7110 L23: -0.0291 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: 0.0729 S13: 0.0923 REMARK 3 S21: -0.0008 S22: -0.0329 S23: -0.0402 REMARK 3 S31: -0.0655 S32: 0.0001 S33: -0.0102 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9890 16.3384 78.8941 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.1314 REMARK 3 T33: 0.1714 T12: 0.0215 REMARK 3 T13: 0.0316 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 1.7427 L22: 2.4608 REMARK 3 L33: 1.7242 L12: 0.8426 REMARK 3 L13: -0.0135 L23: 0.2197 REMARK 3 S TENSOR REMARK 3 S11: 0.0777 S12: -0.0869 S13: 0.1208 REMARK 3 S21: 0.1967 S22: -0.0624 S23: 0.3230 REMARK 3 S31: -0.0234 S32: -0.2163 S33: -0.0333 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2031 25.4196 74.7470 REMARK 3 T TENSOR REMARK 3 T11: 0.1869 T22: 0.1370 REMARK 3 T33: 0.1394 T12: -0.0032 REMARK 3 T13: 0.0267 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 5.0631 L22: 4.7221 REMARK 3 L33: 2.5506 L12: -1.7872 REMARK 3 L13: -1.0502 L23: 0.3735 REMARK 3 S TENSOR REMARK 3 S11: -0.0812 S12: -0.0728 S13: 0.0025 REMARK 3 S21: 0.0036 S22: 0.0503 S23: -0.1085 REMARK 3 S31: -0.1705 S32: 0.1196 S33: 0.0285 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4628 19.6851 80.1555 REMARK 3 T TENSOR REMARK 3 T11: 0.1846 T22: 0.2260 REMARK 3 T33: 0.2708 T12: 0.0248 REMARK 3 T13: 0.0284 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 3.5968 L22: 4.3028 REMARK 3 L33: 1.9674 L12: 3.3674 REMARK 3 L13: 0.7374 L23: 0.7486 REMARK 3 S TENSOR REMARK 3 S11: 0.0085 S12: -0.3332 S13: -0.0220 REMARK 3 S21: 0.0007 S22: -0.0592 S23: 0.3317 REMARK 3 S31: -0.1046 S32: -0.3717 S33: 0.0943 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9569 26.6423 67.0930 REMARK 3 T TENSOR REMARK 3 T11: 0.2142 T22: 0.1669 REMARK 3 T33: 0.1704 T12: -0.0324 REMARK 3 T13: 0.0676 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.8828 L22: 2.5168 REMARK 3 L33: 3.2737 L12: 0.5350 REMARK 3 L13: -1.7854 L23: -0.6039 REMARK 3 S TENSOR REMARK 3 S11: 0.2440 S12: -0.0977 S13: 0.2020 REMARK 3 S21: -0.2269 S22: -0.1354 S23: -0.2196 REMARK 3 S31: -0.4690 S32: 0.4264 S33: -0.0566 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7771 12.9079 66.5677 REMARK 3 T TENSOR REMARK 3 T11: 0.1950 T22: 0.1862 REMARK 3 T33: 0.2514 T12: 0.0253 REMARK 3 T13: 0.0777 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 2.1558 L22: 4.7928 REMARK 3 L33: 3.8032 L12: 2.3250 REMARK 3 L13: -1.9859 L23: -2.6808 REMARK 3 S TENSOR REMARK 3 S11: -0.2848 S12: 0.1393 S13: -0.2257 REMARK 3 S21: -0.1316 S22: -0.1033 S23: -0.3737 REMARK 3 S31: 0.2432 S32: 0.1921 S33: 0.0988 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2208 17.0355 83.7254 REMARK 3 T TENSOR REMARK 3 T11: 0.2105 T22: 0.1052 REMARK 3 T33: 0.1309 T12: -0.0071 REMARK 3 T13: 0.0106 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 4.4818 L22: 3.1556 REMARK 3 L33: 3.9193 L12: -0.2147 REMARK 3 L13: -2.3580 L23: 0.1591 REMARK 3 S TENSOR REMARK 3 S11: 0.2073 S12: -0.1516 S13: 0.0875 REMARK 3 S21: 0.4221 S22: -0.1007 S23: 0.1859 REMARK 3 S31: -0.1349 S32: -0.1225 S33: 0.0161 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 136 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2820 14.2960 87.2105 REMARK 3 T TENSOR REMARK 3 T11: 0.3033 T22: 0.2123 REMARK 3 T33: 0.1786 T12: -0.0360 REMARK 3 T13: 0.0884 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.9838 L22: 1.9019 REMARK 3 L33: 3.2091 L12: -0.1999 REMARK 3 L13: -0.2235 L23: -0.0558 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: -0.6777 S13: -0.1200 REMARK 3 S21: 0.6578 S22: -0.0339 S23: 0.3048 REMARK 3 S31: 0.0298 S32: -0.2433 S33: 0.1428 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1283 16.5489 63.4034 REMARK 3 T TENSOR REMARK 3 T11: 0.2519 T22: 0.2279 REMARK 3 T33: 0.2088 T12: 0.0132 REMARK 3 T13: 0.0578 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.8122 L22: 3.5673 REMARK 3 L33: 1.5764 L12: 2.3104 REMARK 3 L13: -0.2457 L23: -1.1018 REMARK 3 S TENSOR REMARK 3 S11: -0.1020 S12: 0.4511 S13: -0.2174 REMARK 3 S21: -0.3682 S22: 0.0797 S23: 0.1598 REMARK 3 S31: 0.4550 S32: 0.0093 S33: -0.0612 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MCA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002250. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000040 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46222 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.604 REMARK 200 RESOLUTION RANGE LOW (A) : 42.812 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4X50 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M (NH4)2SO4, 0.1M BISTRIS 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.82000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.28300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.59650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.28300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.82000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.59650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 90 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 466 O HOH A 471 1.97 REMARK 500 O HOH A 460 O HOH A 503 2.00 REMARK 500 O HOH A 369 O HOH A 417 2.03 REMARK 500 O HOH A 413 O HOH A 528 2.05 REMARK 500 O HOH A 434 O HOH A 485 2.08 REMARK 500 O HOH A 374 O HOH A 505 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 337 O HOH A 409 4457 1.86 REMARK 500 O HOH A 515 O HOH A 536 4458 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 141 105.12 -161.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 DBREF 5MCA A 1 159 UNP P08191 FIMH_ECOLI 22 180 SEQADV 5MCA PRO A 60 UNP P08191 ARG 81 ENGINEERED MUTATION SEQRES 1 A 159 PHE ALA CYS LYS THR ALA ASN GLY THR ALA ILE PRO ILE SEQRES 2 A 159 GLY GLY GLY SER ALA ASN VAL TYR VAL ASN LEU ALA PRO SEQRES 3 A 159 VAL VAL ASN VAL GLY GLN ASN LEU VAL VAL ASP LEU SER SEQRES 4 A 159 THR GLN ILE PHE CYS HIS ASN ASP TYR PRO GLU THR ILE SEQRES 5 A 159 THR ASP TYR VAL THR LEU GLN PRO GLY SER ALA TYR GLY SEQRES 6 A 159 GLY VAL LEU SER ASN PHE SER GLY THR VAL LYS TYR SER SEQRES 7 A 159 GLY SER SER TYR PRO PHE PRO THR THR SER GLU THR PRO SEQRES 8 A 159 ARG VAL VAL TYR ASN SER ARG THR ASP LYS PRO TRP PRO SEQRES 9 A 159 VAL ALA LEU TYR LEU THR PRO VAL SER SER ALA GLY GLY SEQRES 10 A 159 VAL ALA ILE LYS ALA GLY SER LEU ILE ALA VAL LEU ILE SEQRES 11 A 159 LEU ARG GLN THR ASN ASN TYR ASN SER ASP ASP PHE GLN SEQRES 12 A 159 PHE VAL TRP ASN ILE TYR ALA ASN ASN ASP VAL VAL VAL SEQRES 13 A 159 PRO THR GLY HET SO4 A 201 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *248(H2 O) HELIX 1 AA1 GLY A 66 SER A 69 5 4 SHEET 1 AA1 3 ALA A 2 THR A 5 0 SHEET 2 AA1 3 ILE A 42 HIS A 45 -1 O HIS A 45 N ALA A 2 SHEET 3 AA1 3 LYS A 101 PRO A 102 -1 O LYS A 101 N CYS A 44 SHEET 1 AA2 4 ALA A 18 VAL A 22 0 SHEET 2 AA2 4 PHE A 142 ALA A 150 1 O ASN A 147 N VAL A 20 SHEET 3 AA2 4 LEU A 125 ASN A 135 -1 N ILE A 126 O ILE A 148 SHEET 4 AA2 4 ALA A 63 TYR A 64 -1 N ALA A 63 O VAL A 128 SHEET 1 AA3 5 ALA A 18 VAL A 22 0 SHEET 2 AA3 5 PHE A 142 ALA A 150 1 O ASN A 147 N VAL A 20 SHEET 3 AA3 5 LEU A 125 ASN A 135 -1 N ILE A 126 O ILE A 148 SHEET 4 AA3 5 ASP A 54 LEU A 58 -1 N TYR A 55 O THR A 134 SHEET 5 AA3 5 VAL A 93 TYR A 95 -1 O TYR A 95 N ASP A 54 SHEET 1 AA4 4 ASN A 33 ASP A 37 0 SHEET 2 AA4 4 VAL A 105 LEU A 109 -1 O LEU A 107 N VAL A 35 SHEET 3 AA4 4 GLY A 73 TYR A 77 -1 N THR A 74 O TYR A 108 SHEET 4 AA4 4 SER A 80 PHE A 84 -1 O PHE A 84 N GLY A 73 SHEET 1 AA5 2 GLY A 117 ILE A 120 0 SHEET 2 AA5 2 VAL A 154 PRO A 157 -1 O VAL A 156 N VAL A 118 SSBOND 1 CYS A 3 CYS A 44 1555 1555 2.10 CISPEP 1 PHE A 84 PRO A 85 0 4.56 SITE 1 AC1 4 SER A 114 ARG A 132 HOH A 301 HOH A 325 CRYST1 49.640 57.193 64.566 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020145 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015488 0.00000