HEADER TRANSFERASE 15-NOV-16 5MEK TITLE SULPHOTRANSFERASE-18 FROM ARABIDOPSIS THALIANA IN COMPLEX WITH 3'- TITLE 2 PHOSPHOADENOSINE 5'-PHOSPHATE (PAP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOSOLIC SULFOTRANSFERASE 18; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATSOT18,DESULFO-GLUCOSINOLATE SULFOTRANSFERASE B, COMPND 5 SULFOTRANSFERASE 5B,ATST5B; COMPND 6 EC: 2.8.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: SOT18, ST5B, AT1G74090, F2P9.4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SULPHOTRANSFERASES, GLUCOSINOLATE-BIOSYNTHESIS, CATALYSIS, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.HIRSCHMANN,F.KRAUSE,P.BARUCH,I.CHIZHOV,J.W.MUELLER,D.J.MANSTEIN, AUTHOR 2 J.PAPENBROCK,R.FEDOROV REVDAT 3 17-JAN-24 5MEK 1 REMARK REVDAT 2 06-SEP-17 5MEK 1 REMARK REVDAT 1 05-JUL-17 5MEK 0 JRNL AUTH F.HIRSCHMANN,F.KRAUSE,P.BARUCH,I.CHIZHOV,J.W.MUELLER, JRNL AUTH 2 D.J.MANSTEIN,J.PAPENBROCK,R.FEDOROV JRNL TITL STRUCTURAL AND BIOCHEMICAL STUDIES OF SULPHOTRANSFERASE 18 JRNL TITL 2 FROM ARABIDOPSIS THALIANA EXPLAIN ITS SUBSTRATE SPECIFICITY JRNL TITL 3 AND REACTION MECHANISM. JRNL REF SCI REP V. 7 4160 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28646214 JRNL DOI 10.1038/S41598-017-04539-2 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 40227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2137 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2878 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 158 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2647 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 135 REMARK 3 SOLVENT ATOMS : 242 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.203 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2217 ; 5.666 ; 4.366 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5MEK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002343. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91 REMARK 200 MONOCHROMATOR : HORIZONTALLY DIFFRACTING SI REMARK 200 (111) MONOCHROMATOR REMARK 200 OPTICS : PT COATED MIRRORS IN A REMARK 200 KIRKPATRICK-BAEZ GEOMETRY AS THE REMARK 200 FOCUSING SYSTEM REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42500 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 45.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.66 REMARK 200 R MERGE (I) : 0.09270 REMARK 200 R SYM (I) : 0.02750 REMARK 200 FOR THE DATA SET : 20.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.33 REMARK 200 R MERGE FOR SHELL (I) : 0.75320 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB-ID: 1Q44 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 5.9, 16.5% PEG4000, 160 REMARK 280 MM NACL AND 5% 1-PROPANOL, VAPOR DIFFUSION, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.75000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.37000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.37000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 151.12500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.37000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.37000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.37500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.37000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.37000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 151.12500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.37000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.37000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.37500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 100.75000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 737 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 530 O HOH A 650 1.28 REMARK 500 O HOH A 505 O HOH A 670 1.46 REMARK 500 O HOH A 552 O HOH A 618 1.58 REMARK 500 O HOH A 638 O HOH A 642 1.68 REMARK 500 O HOH A 675 O HOH A 720 1.76 REMARK 500 O HOH A 540 O HOH A 657 1.80 REMARK 500 O HOH A 707 O HOH A 726 1.97 REMARK 500 O HOH A 518 O HOH A 636 2.08 REMARK 500 NZ LYS A 288 O HOH A 501 2.13 REMARK 500 O HOH A 668 O HOH A 695 2.18 REMARK 500 O HIS A 191 O HOH A 502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 507 O HOH A 535 6455 1.06 REMARK 500 O HOH A 575 O HOH A 616 6555 1.34 REMARK 500 O2 EDO A 416 O POL A 425 8665 1.80 REMARK 500 O HOH A 543 O HOH A 647 6455 1.82 REMARK 500 C2 EDO A 416 O POL A 425 8665 2.05 REMARK 500 O HOH A 576 O HOH A 696 6455 2.06 REMARK 500 O HOH A 631 O HOH A 714 6455 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ASP A 134 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 142 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 93 19.31 84.28 REMARK 500 ILE A 133 -63.23 -123.76 REMARK 500 ARG A 313 -77.84 -102.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A3P A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POL A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POL A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POL A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POL A 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POL A 428 DBREF 5MEK A 26 347 UNP Q9C9C9 SOT18_ARATH 26 347 SEQRES 1 A 322 GLU SER THR GLU PHE GLU LYS ASN GLN LYS ARG TYR GLN SEQRES 2 A 322 ASP LEU ILE SER THR PHE PRO HIS GLU LYS GLY TRP ARG SEQRES 3 A 322 PRO LYS GLU PRO LEU ILE GLU TYR GLY GLY TYR TRP TRP SEQRES 4 A 322 LEU PRO SER LEU LEU GLU GLY CYS ILE HIS ALA GLN GLU SEQRES 5 A 322 PHE PHE GLN ALA ARG PRO SER ASP PHE LEU VAL CYS SER SEQRES 6 A 322 TYR PRO LYS THR GLY THR THR TRP LEU LYS ALA LEU THR SEQRES 7 A 322 PHE ALA ILE ALA ASN ARG SER ARG PHE ASP ASP SER SER SEQRES 8 A 322 ASN PRO LEU LEU LYS ARG ASN PRO HIS GLU PHE VAL PRO SEQRES 9 A 322 TYR ILE GLU ILE ASP PHE PRO PHE PHE PRO GLU VAL ASP SEQRES 10 A 322 VAL LEU LYS ASP LYS GLY ASN THR LEU PHE SER THR HIS SEQRES 11 A 322 ILE PRO TYR GLU LEU LEU PRO ASP SER VAL VAL LYS SER SEQRES 12 A 322 GLY CYS LYS MET VAL TYR ILE TRP ARG GLU PRO LYS ASP SEQRES 13 A 322 THR PHE ILE SER MET TRP THR PHE LEU HIS LYS GLU ARG SEQRES 14 A 322 THR GLU LEU GLY PRO VAL SER ASN LEU GLU GLU SER PHE SEQRES 15 A 322 ASP MET PHE CYS ARG GLY LEU SER GLY TYR GLY PRO TYR SEQRES 16 A 322 LEU ASN HIS ILE LEU ALA TYR TRP LYS ALA TYR GLN GLU SEQRES 17 A 322 ASN PRO ASP ARG ILE LEU PHE LEU LYS TYR GLU THR MET SEQRES 18 A 322 ARG ALA ASP PRO LEU PRO TYR VAL LYS SER LEU ALA GLU SEQRES 19 A 322 PHE MET GLY HIS GLY PHE THR ALA GLU GLU GLU GLU LYS SEQRES 20 A 322 GLY VAL VAL GLU LYS VAL VAL ASN LEU CYS SER PHE GLU SEQRES 21 A 322 THR LEU LYS ASN LEU GLU ALA ASN LYS GLY GLU LYS ASP SEQRES 22 A 322 ARG GLU ASP ARG PRO GLY VAL TYR ALA ASN SER ALA TYR SEQRES 23 A 322 PHE ARG LYS GLY LYS VAL GLY ASP TRP SER ASN TYR LEU SEQRES 24 A 322 THR PRO GLU MET ALA ALA ARG ILE ASP GLY LEU MET GLU SEQRES 25 A 322 GLU LYS PHE LYS GLY THR GLY LEU LEU GLU HET A3P A 401 27 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HET EDO A 410 4 HET EDO A 411 4 HET EDO A 412 4 HET EDO A 413 4 HET EDO A 414 4 HET EDO A 415 4 HET EDO A 416 4 HET EDO A 417 4 HET EDO A 418 4 HET EDO A 419 4 HET EDO A 420 4 HET EDO A 421 4 HET EDO A 422 4 HET EDO A 423 4 HET POL A 424 4 HET POL A 425 4 HET POL A 426 4 HET POL A 427 4 HET POL A 428 4 HETNAM A3P ADENOSINE-3'-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM POL N-PROPANOL HETSYN EDO ETHYLENE GLYCOL HETSYN POL 1-PROPONOL FORMUL 2 A3P C10 H15 N5 O10 P2 FORMUL 3 EDO 22(C2 H6 O2) FORMUL 25 POL 5(C3 H8 O) FORMUL 30 HOH *242(H2 O) HELIX 1 AA1 THR A 28 THR A 43 1 16 HELIX 2 AA2 LEU A 65 PHE A 79 1 15 HELIX 3 AA3 GLY A 95 ARG A 109 1 15 HELIX 4 AA4 ASP A 113 LYS A 121 5 9 HELIX 5 AA5 ASN A 123 VAL A 128 5 6 HELIX 6 AA6 ILE A 133 PHE A 138 1 6 HELIX 7 AA7 VAL A 141 ASP A 146 1 6 HELIX 8 AA8 PRO A 157 LEU A 161 5 5 HELIX 9 AA9 PRO A 162 GLY A 169 1 8 HELIX 10 AB1 GLU A 178 HIS A 191 1 14 HELIX 11 AB2 ASN A 202 ARG A 212 1 11 HELIX 12 AB3 PRO A 219 ASN A 234 1 16 HELIX 13 AB4 TYR A 243 ASP A 249 1 7 HELIX 14 AB5 ASP A 249 MET A 261 1 13 HELIX 15 AB6 THR A 266 LYS A 272 1 7 HELIX 16 AB7 GLY A 273 CYS A 282 1 10 HELIX 17 AB8 SER A 283 ASN A 289 1 7 HELIX 18 AB9 LEU A 290 LYS A 294 5 5 HELIX 19 AC1 ALA A 307 PHE A 312 5 6 HELIX 20 AC2 GLY A 318 TYR A 323 5 6 HELIX 21 AC3 THR A 325 LYS A 341 1 17 SHEET 1 AA1 3 HIS A 46 ARG A 51 0 SHEET 2 AA1 3 GLU A 54 TYR A 59 -1 O LEU A 56 N GLU A 47 SHEET 3 AA1 3 TYR A 62 TRP A 64 -1 O TYR A 62 N TYR A 59 SHEET 1 AA2 4 LEU A 151 THR A 154 0 SHEET 2 AA2 4 PHE A 86 SER A 90 1 N VAL A 88 O PHE A 152 SHEET 3 AA2 4 LYS A 171 TRP A 176 1 O VAL A 173 N CYS A 89 SHEET 4 AA2 4 ILE A 238 LYS A 242 1 O LEU A 241 N TYR A 174 CISPEP 1 GLY A 218 PRO A 219 0 6.00 SITE 1 AC1 23 LYS A 93 THR A 94 GLY A 95 THR A 96 SITE 2 AC1 23 THR A 97 TRP A 98 ARG A 177 SER A 185 SITE 3 AC1 23 TYR A 243 CYS A 282 SER A 283 PHE A 284 SITE 4 AC1 23 TYR A 311 PHE A 312 ARG A 313 LYS A 314 SITE 5 AC1 23 GLY A 315 EDO A 410 HOH A 550 HOH A 579 SITE 6 AC1 23 HOH A 590 HOH A 600 HOH A 623 SITE 1 AC2 5 ALA A 292 ASP A 298 GLU A 300 ASN A 308 SITE 2 AC2 5 HOH A 521 SITE 1 AC3 8 GLY A 60 GLU A 159 THR A 195 GLU A 196 SITE 2 AC3 8 LEU A 197 GLY A 198 EDO A 405 HOH A 526 SITE 1 AC4 6 ARG A 82 VAL A 143 LEU A 144 ASP A 146 SITE 2 AC4 6 ASN A 149 PHE A 152 SITE 1 AC5 8 ARG A 51 LEU A 190 HIS A 191 GLU A 193 SITE 2 AC5 8 EDO A 403 HOH A 502 HOH A 505 HOH A 575 SITE 1 AC6 9 PHE A 210 CYS A 211 PRO A 219 TYR A 220 SITE 2 AC6 9 LEU A 221 ILE A 332 LEU A 335 HOH A 558 SITE 3 AC6 9 HOH A 617 SITE 1 AC7 8 ILE A 73 GLN A 76 GLU A 77 TRP A 187 SITE 2 AC7 8 HIS A 191 VAL A 200 SER A 201 ASN A 202 SITE 1 AC8 1 HIS A 155 SITE 1 AC9 4 PHE A 79 GLN A 80 PHE A 135 EDO A 420 SITE 1 AD1 8 PRO A 92 LYS A 93 THR A 97 HIS A 125 SITE 2 AD1 8 TYR A 130 HIS A 155 TYR A 311 A3P A 401 SITE 1 AD2 7 ALA A 105 ASN A 108 ARG A 109 PHE A 112 SITE 2 AD2 7 ASP A 113 ASP A 114 ASN A 117 SITE 1 AD3 4 PHE A 104 ARG A 111 HOH A 503 HOH A 586 SITE 1 AD4 6 ARG A 122 GLU A 126 EDO A 416 HOH A 522 SITE 2 AD4 6 HOH A 539 HOH A 565 SITE 1 AD5 3 ARG A 82 SER A 84 LYS A 147 SITE 1 AD6 5 ALA A 107 ASN A 108 ARG A 109 SER A 110 SITE 2 AD6 5 HIS A 263 SITE 1 AD7 6 PRO A 118 LYS A 121 ARG A 122 PHE A 127 SITE 2 AD7 6 EDO A 413 POL A 425 SITE 1 AD8 4 TYR A 62 GLU A 159 ASN A 222 LYS A 339 SITE 1 AD9 9 THR A 28 GLU A 29 PHE A 30 HIS A 74 SITE 2 AD9 9 PHE A 135 PRO A 136 PRO A 139 HOH A 632 SITE 3 AD9 9 HOH A 706 SITE 1 AE1 3 GLU A 31 PHE A 137 HOH A 510 SITE 1 AE2 5 PHE A 135 PRO A 139 LEU A 144 LYS A 145 SITE 2 AE2 5 EDO A 409 SITE 1 AE3 5 GLN A 76 PRO A 162 ASP A 163 VAL A 200 SITE 2 AE3 5 HOH A 512 SITE 1 AE4 5 TRP A 176 TRP A 228 PHE A 240 LEU A 345 SITE 2 AE4 5 HOH A 509 SITE 1 AE5 4 ARG A 302 GLY A 304 VAL A 305 HOH A 585 SITE 1 AE6 4 PHE A 138 PRO A 139 GLU A 140 ASP A 301 SITE 1 AE7 3 ARG A 122 ASP A 142 EDO A 416 SITE 1 AE8 3 LEU A 65 MET A 186 GLY A 216 SITE 1 AE9 3 GLN A 232 PRO A 235 ASN A 280 SITE 1 AF1 10 PHE A 44 PRO A 45 GLU A 58 LYS A 192 SITE 2 AF1 10 HOH A 507 HOH A 511 HOH A 535 HOH A 569 SITE 3 AF1 10 HOH A 627 HOH A 657 CRYST1 62.740 62.740 201.500 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015939 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004963 0.00000