HEADER DE NOVO PROTEIN 18-NOV-16 5MFC TITLE DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII IN COMPLEX WITH (KR)4-GFP COMPND MOL_ID: 1; COMPND 2 MOLECULE: YIIIM5AII; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: (KR)4-GREEN FLUORESCENT PROTEIN,GREEN FLUORESCENT PROTEIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 8 ORGANISM_COMMON: JELLYFISH; SOURCE 9 ORGANISM_TAXID: 6100; SOURCE 10 GENE: GFP; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS DESIGNED ARMADILLO REPEAT PROTEIN, PEPTIDE BINDING, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.HANSEN,J.KIEFER,C.MADHURANTAKAM,P.MITTL,A.PLUECKTHUN REVDAT 3 17-JAN-24 5MFC 1 REMARK REVDAT 2 04-OCT-17 5MFC 1 JRNL REVDAT 1 19-JUL-17 5MFC 0 JRNL AUTH S.HANSEN,J.D.KIEFER,C.MADHURANTAKAM,P.R.E.MITTL,A.PLUCKTHUN JRNL TITL STRUCTURES OF DESIGNED ARMADILLO REPEAT PROTEINS BINDING TO JRNL TITL 2 PEPTIDES FUSED TO GLOBULAR DOMAINS. JRNL REF PROTEIN SCI. V. 26 1942 2017 JRNL REFN ESSN 1469-896X JRNL PMID 28691351 JRNL DOI 10.1002/PRO.3229 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 47802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2364 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.16 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3482 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1950 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3315 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 167 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8037 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 78 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.09040 REMARK 3 B22 (A**2) : 2.76780 REMARK 3 B33 (A**2) : -12.85810 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.410 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.368 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.233 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.386 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.239 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 8257 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11194 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2910 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 286 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1153 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 8211 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1072 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 9339 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.25 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.73 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.79 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 18.8117 16.8561 -42.7403 REMARK 3 T TENSOR REMARK 3 T11: -0.3674 T22: -0.3328 REMARK 3 T33: -0.3052 T12: 0.0355 REMARK 3 T13: 0.0009 T23: -0.2737 REMARK 3 L TENSOR REMARK 3 L11: 3.9730 L22: 2.2645 REMARK 3 L33: 1.9668 L12: -0.3741 REMARK 3 L13: -1.2779 L23: -0.8606 REMARK 3 S TENSOR REMARK 3 S11: -0.0991 S12: 0.2349 S13: -0.9310 REMARK 3 S21: 0.1393 S22: -0.1329 S23: 0.3455 REMARK 3 S31: -0.0883 S32: -0.1319 S33: 0.2320 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 50.8784 16.9911 -43.5735 REMARK 3 T TENSOR REMARK 3 T11: -0.0489 T22: 0.0129 REMARK 3 T33: -0.5129 T12: -0.0561 REMARK 3 T13: -0.0930 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 4.3598 L22: 2.5441 REMARK 3 L33: 1.1039 L12: -0.7035 REMARK 3 L13: 0.1003 L23: -0.0265 REMARK 3 S TENSOR REMARK 3 S11: 0.0320 S12: -0.1125 S13: 0.0565 REMARK 3 S21: 0.2301 S22: -0.1834 S23: -0.2780 REMARK 3 S31: -0.1049 S32: 0.1429 S33: 0.1514 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 6.7000 36.4760 -25.0242 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: -0.4555 REMARK 3 T33: -0.5792 T12: 0.0982 REMARK 3 T13: 0.1786 T23: -0.1476 REMARK 3 L TENSOR REMARK 3 L11: 3.3179 L22: 3.3583 REMARK 3 L33: 4.2170 L12: -0.4986 REMARK 3 L13: 2.2993 L23: 1.0388 REMARK 3 S TENSOR REMARK 3 S11: -0.2108 S12: -0.0255 S13: 0.2372 REMARK 3 S21: 1.1177 S22: 0.0998 S23: 0.3574 REMARK 3 S31: 0.3182 S32: 0.0287 S33: 0.1110 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 12.6203 64.9615 -17.2901 REMARK 3 T TENSOR REMARK 3 T11: 0.6860 T22: -0.2084 REMARK 3 T33: -0.7647 T12: 0.0476 REMARK 3 T13: -0.0178 T23: -0.0877 REMARK 3 L TENSOR REMARK 3 L11: 2.5023 L22: 7.7253 REMARK 3 L33: 2.6617 L12: -0.4340 REMARK 3 L13: 1.6624 L23: 0.6440 REMARK 3 S TENSOR REMARK 3 S11: -0.4744 S12: 0.0295 S13: 0.3001 REMARK 3 S21: 1.6408 S22: 0.2792 S23: -0.1113 REMARK 3 S31: -0.1937 S32: 0.3232 S33: 0.1952 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002386. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47804 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 40.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 12.80 REMARK 200 R MERGE FOR SHELL (I) : 4.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5AEI, 1GFL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% W/V PEG 4000, 0.1M NA ACETATE REMARK 280 TRIHYDRATE PH 4.6,, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.66500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 122.66500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.55500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.12000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.55500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.12000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 122.66500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.55500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.12000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 122.66500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.55500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 62.12000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 293 REMARK 465 GLY B 982 REMARK 465 PRO B 983 REMARK 465 GLY B 984 REMARK 465 SER B 985 REMARK 465 GLY B 986 REMARK 465 SER B 987 REMARK 465 PRO B 988 REMARK 465 GLY B 1232 REMARK 465 MET B 1233 REMARK 465 ASP B 1234 REMARK 465 GLU B 1235 REMARK 465 LEU B 1236 REMARK 465 TYR B 1237 REMARK 465 LYS B 1238 REMARK 465 GLY C 8 REMARK 465 PRO C 9 REMARK 465 SER C 292 REMARK 465 HIS C 293 REMARK 465 GLY D 982 REMARK 465 PRO D 983 REMARK 465 GLY D 984 REMARK 465 SER D 985 REMARK 465 GLY D 986 REMARK 465 SER D 987 REMARK 465 PRO D 988 REMARK 465 LYS D 989 REMARK 465 THR D 1230 REMARK 465 HIS D 1231 REMARK 465 GLY D 1232 REMARK 465 MET D 1233 REMARK 465 ASP D 1234 REMARK 465 GLU D 1235 REMARK 465 LEU D 1236 REMARK 465 TYR D 1237 REMARK 465 LYS D 1238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 11 23.14 -141.23 REMARK 500 ASN A 21 40.31 -108.59 REMARK 500 SER A 190 141.20 -38.23 REMARK 500 SER A 231 40.27 -106.68 REMARK 500 ASP B1021 97.75 -161.20 REMARK 500 SER C 11 22.44 -140.95 REMARK 500 SER C 190 136.16 -36.65 REMARK 500 LEU C 271 21.02 -71.57 REMARK 500 ASP D1021 97.57 -162.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 319 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH C 308 DISTANCE = 7.44 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 1301 DBREF 5MFC A 8 293 PDB 5MFC 5MFC 8 293 DBREF 5MFC B 982 1002 PDB 5MFC 5MFC 982 1002 DBREF1 5MFC B 1003 1238 UNP A0A059PIQ0_AEQVI DBREF2 5MFC B A0A059PIQ0 3 238 DBREF 5MFC C 8 293 PDB 5MFC 5MFC 8 293 DBREF 5MFC D 982 1002 PDB 5MFC 5MFC 982 1002 DBREF1 5MFC D 1003 1238 UNP A0A059PIQ0_AEQVI DBREF2 5MFC D A0A059PIQ0 3 238 SEQADV 5MFC ARG B 1030 UNP A0A059PIQ SER 30 CONFLICT SEQADV 5MFC CRO B 1066 UNP A0A059PIQ THR 65 CHROMOPHORE SEQADV 5MFC CRO B 1066 UNP A0A059PIQ TYR 66 CHROMOPHORE SEQADV 5MFC CRO B 1066 UNP A0A059PIQ GLY 67 CHROMOPHORE SEQADV 5MFC SER B 1072 UNP A0A059PIQ ALA 72 CONFLICT SEQADV 5MFC ARG B 1080 UNP A0A059PIQ GLN 80 CONFLICT SEQADV 5MFC VAL B 1206 UNP A0A059PIQ ALA 206 CONFLICT SEQADV 5MFC ARG D 1030 UNP A0A059PIQ SER 30 CONFLICT SEQADV 5MFC CRO D 1066 UNP A0A059PIQ THR 65 CHROMOPHORE SEQADV 5MFC CRO D 1066 UNP A0A059PIQ TYR 66 CHROMOPHORE SEQADV 5MFC CRO D 1066 UNP A0A059PIQ GLY 67 CHROMOPHORE SEQADV 5MFC SER D 1072 UNP A0A059PIQ ALA 72 CONFLICT SEQADV 5MFC ARG D 1080 UNP A0A059PIQ GLN 80 CONFLICT SEQADV 5MFC VAL D 1206 UNP A0A059PIQ ALA 206 CONFLICT SEQRES 1 A 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU SEQRES 2 A 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG SEQRES 3 A 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE SEQRES 4 A 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL SEQRES 5 A 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU SEQRES 6 A 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN SEQRES 7 A 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO SEQRES 8 A 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE SEQRES 9 A 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER SEQRES 10 A 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY SEQRES 11 A 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN SEQRES 12 A 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN SEQRES 13 A 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE SEQRES 14 A 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SEQRES 15 A 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA SEQRES 16 A 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN SEQRES 17 A 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN SEQRES 18 A 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA SEQRES 19 A 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU SEQRES 20 A 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS SEQRES 21 A 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN SEQRES 22 A 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS SEQRES 1 B 255 GLY PRO GLY SER GLY SER PRO LYS ARG LYS ARG LYS ARG SEQRES 2 B 255 LYS ARG GLU GLY LYS LEU MET SER LYS GLY GLU GLU LEU SEQRES 3 B 255 PHE THR GLY VAL VAL PRO ILE LEU VAL GLU LEU ASP GLY SEQRES 4 B 255 ASP VAL ASN GLY HIS LYS PHE SER VAL ARG GLY GLU GLY SEQRES 5 B 255 GLU GLY ASP ALA THR ASN GLY LYS LEU THR LEU LYS PHE SEQRES 6 B 255 ILE CYS THR THR GLY LYS LEU PRO VAL PRO TRP PRO THR SEQRES 7 B 255 LEU VAL THR THR LEU CRO VAL GLN CYS PHE SER ARG TYR SEQRES 8 B 255 PRO ASP HIS MET LYS ARG HIS ASP PHE PHE LYS SER ALA SEQRES 9 B 255 MET PRO GLU GLY TYR VAL GLN GLU ARG THR ILE SER PHE SEQRES 10 B 255 LYS ASP ASP GLY THR TYR LYS THR ARG ALA GLU VAL LYS SEQRES 11 B 255 PHE GLU GLY ASP THR LEU VAL ASN ARG ILE GLU LEU LYS SEQRES 12 B 255 GLY ILE ASP PHE LYS GLU ASP GLY ASN ILE LEU GLY HIS SEQRES 13 B 255 LYS LEU GLU TYR ASN PHE ASN SER HIS ASN VAL TYR ILE SEQRES 14 B 255 THR ALA ASP LYS GLN LYS ASN GLY ILE LYS ALA ASN PHE SEQRES 15 B 255 LYS ILE ARG HIS ASN VAL GLU ASP GLY SER VAL GLN LEU SEQRES 16 B 255 ALA ASP HIS TYR GLN GLN ASN THR PRO ILE GLY ASP GLY SEQRES 17 B 255 PRO VAL LEU LEU PRO ASP ASN HIS TYR LEU SER THR GLN SEQRES 18 B 255 SER VAL LEU SER LYS ASP PRO ASN GLU LYS ARG ASP HIS SEQRES 19 B 255 MET VAL LEU LEU GLU PHE VAL THR ALA ALA GLY ILE THR SEQRES 20 B 255 HIS GLY MET ASP GLU LEU TYR LYS SEQRES 1 C 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU SEQRES 2 C 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG SEQRES 3 C 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE SEQRES 4 C 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL SEQRES 5 C 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU SEQRES 6 C 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN SEQRES 7 C 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO SEQRES 8 C 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE SEQRES 9 C 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER SEQRES 10 C 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY SEQRES 11 C 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN SEQRES 12 C 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN SEQRES 13 C 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE SEQRES 14 C 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SEQRES 15 C 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA SEQRES 16 C 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN SEQRES 17 C 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN SEQRES 18 C 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA SEQRES 19 C 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU SEQRES 20 C 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS SEQRES 21 C 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN SEQRES 22 C 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS SEQRES 1 D 255 GLY PRO GLY SER GLY SER PRO LYS ARG LYS ARG LYS ARG SEQRES 2 D 255 LYS ARG GLU GLY LYS LEU MET SER LYS GLY GLU GLU LEU SEQRES 3 D 255 PHE THR GLY VAL VAL PRO ILE LEU VAL GLU LEU ASP GLY SEQRES 4 D 255 ASP VAL ASN GLY HIS LYS PHE SER VAL ARG GLY GLU GLY SEQRES 5 D 255 GLU GLY ASP ALA THR ASN GLY LYS LEU THR LEU LYS PHE SEQRES 6 D 255 ILE CYS THR THR GLY LYS LEU PRO VAL PRO TRP PRO THR SEQRES 7 D 255 LEU VAL THR THR LEU CRO VAL GLN CYS PHE SER ARG TYR SEQRES 8 D 255 PRO ASP HIS MET LYS ARG HIS ASP PHE PHE LYS SER ALA SEQRES 9 D 255 MET PRO GLU GLY TYR VAL GLN GLU ARG THR ILE SER PHE SEQRES 10 D 255 LYS ASP ASP GLY THR TYR LYS THR ARG ALA GLU VAL LYS SEQRES 11 D 255 PHE GLU GLY ASP THR LEU VAL ASN ARG ILE GLU LEU LYS SEQRES 12 D 255 GLY ILE ASP PHE LYS GLU ASP GLY ASN ILE LEU GLY HIS SEQRES 13 D 255 LYS LEU GLU TYR ASN PHE ASN SER HIS ASN VAL TYR ILE SEQRES 14 D 255 THR ALA ASP LYS GLN LYS ASN GLY ILE LYS ALA ASN PHE SEQRES 15 D 255 LYS ILE ARG HIS ASN VAL GLU ASP GLY SER VAL GLN LEU SEQRES 16 D 255 ALA ASP HIS TYR GLN GLN ASN THR PRO ILE GLY ASP GLY SEQRES 17 D 255 PRO VAL LEU LEU PRO ASP ASN HIS TYR LEU SER THR GLN SEQRES 18 D 255 SER VAL LEU SER LYS ASP PRO ASN GLU LYS ARG ASP HIS SEQRES 19 D 255 MET VAL LEU LEU GLU PHE VAL THR ALA ALA GLY ILE THR SEQRES 20 D 255 HIS GLY MET ASP GLU LEU TYR LYS MODRES 5MFC CRO B 1066 GLY CHROMOPHORE MODRES 5MFC CRO D 1066 GLY CHROMOPHORE HET CRO B1066 22 HET CRO D1066 22 HET ACT B1301 4 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM ACT ACETATE ION HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 2 CRO 2(C15 H17 N3 O5) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 HOH *78(H2 O) HELIX 1 AA1 GLU A 12 LEU A 20 1 9 HELIX 2 AA2 ASP A 24 SER A 40 1 17 HELIX 3 AA3 GLY A 42 ALA A 52 1 11 HELIX 4 AA4 ALA A 54 LEU A 61 1 8 HELIX 5 AA5 LEU A 62 SER A 64 5 3 HELIX 6 AA6 ASN A 66 ALA A 81 1 16 HELIX 7 AA7 GLY A 84 ALA A 94 1 11 HELIX 8 AA8 GLY A 95 LEU A 103 1 9 HELIX 9 AA9 LEU A 104 SER A 106 5 3 HELIX 10 AB1 ASN A 108 ALA A 123 1 16 HELIX 11 AB2 GLY A 126 ALA A 136 1 11 HELIX 12 AB3 ALA A 138 LEU A 145 1 8 HELIX 13 AB4 LEU A 146 SER A 148 5 3 HELIX 14 AB5 ASN A 150 ALA A 165 1 16 HELIX 15 AB6 GLY A 168 ALA A 178 1 11 HELIX 16 AB7 GLY A 179 LEU A 187 1 9 HELIX 17 AB8 ASN A 192 ALA A 207 1 16 HELIX 18 AB9 GLY A 210 ALA A 220 1 11 HELIX 19 AC1 GLY A 221 LEU A 229 1 9 HELIX 20 AC2 ASN A 234 SER A 250 1 17 HELIX 21 AC3 GLY A 252 GLY A 263 1 12 HELIX 22 AC4 GLY A 263 LEU A 271 1 9 HELIX 23 AC5 GLU A 277 GLN A 291 1 15 HELIX 24 AC6 LYS B 1003 THR B 1009 5 7 HELIX 25 AC7 PRO B 1056 VAL B 1061 5 6 HELIX 26 AC8 VAL B 1068 SER B 1072 5 5 HELIX 27 AC9 PRO B 1075 HIS B 1081 5 7 HELIX 28 AD1 ASP B 1082 ALA B 1087 1 6 HELIX 29 AD2 LYS B 1156 ASN B 1159 5 4 HELIX 30 AD3 GLU C 12 LEU C 20 1 9 HELIX 31 AD4 ASP C 24 ALA C 39 1 16 HELIX 32 AD5 GLY C 42 ALA C 52 1 11 HELIX 33 AD6 ALA C 54 LEU C 61 1 8 HELIX 34 AD7 LEU C 62 SER C 64 5 3 HELIX 35 AD8 ASN C 66 ALA C 81 1 16 HELIX 36 AD9 GLY C 84 ALA C 94 1 11 HELIX 37 AE1 GLY C 95 LEU C 103 1 9 HELIX 38 AE2 LEU C 104 SER C 106 5 3 HELIX 39 AE3 ASN C 108 ALA C 123 1 16 HELIX 40 AE4 GLY C 126 ALA C 136 1 11 HELIX 41 AE5 ALA C 138 LEU C 145 1 8 HELIX 42 AE6 LEU C 146 SER C 148 5 3 HELIX 43 AE7 ASN C 150 ALA C 165 1 16 HELIX 44 AE8 GLY C 168 ALA C 178 1 11 HELIX 45 AE9 GLY C 179 LEU C 187 1 9 HELIX 46 AF1 ASN C 192 ALA C 207 1 16 HELIX 47 AF2 GLY C 210 ALA C 220 1 11 HELIX 48 AF3 GLY C 221 LEU C 229 1 9 HELIX 49 AF4 ASN C 234 SER C 250 1 17 HELIX 50 AF5 GLY C 252 GLY C 263 1 12 HELIX 51 AF6 GLY C 263 LEU C 271 1 9 HELIX 52 AF7 ASN C 276 LEU C 290 1 15 HELIX 53 AF8 LYS D 1003 THR D 1009 5 7 HELIX 54 AF9 PRO D 1056 VAL D 1061 5 6 HELIX 55 AG1 VAL D 1068 SER D 1072 5 5 HELIX 56 AG2 PRO D 1075 HIS D 1081 5 7 HELIX 57 AG3 ASP D 1082 ALA D 1087 1 6 HELIX 58 AG4 LYS D 1156 ASN D 1159 5 4 SHEET 1 AA112 VAL B1012 VAL B1022 0 SHEET 2 AA112 HIS B1025 ASP B1036 -1 O PHE B1027 N GLY B1020 SHEET 3 AA112 LYS B1041 CYS B1048 -1 O ILE B1047 N ARG B1030 SHEET 4 AA112 HIS B1217 ALA B1227 -1 O LEU B1220 N LEU B1044 SHEET 5 AA112 HIS B1199 SER B1208 -1 N SER B1202 O THR B1225 SHEET 6 AA112 HIS B1148 ASP B1155 -1 N VAL B1150 O LEU B1201 SHEET 7 AA112 GLY B1160 ASN B1170 -1 O LYS B1162 N THR B1153 SHEET 8 AA112 VAL B1176 PRO B1187 -1 O GLN B1177 N HIS B1169 SHEET 9 AA112 TYR B1092 PHE B1100 -1 N GLU B1095 O GLN B1184 SHEET 10 AA112 THR B1105 GLU B1115 -1 O TYR B1106 N ILE B1098 SHEET 11 AA112 THR B1118 ILE B1128 -1 O VAL B1120 N LYS B1113 SHEET 12 AA112 VAL B1012 VAL B1022 1 N GLU B1017 O ILE B1123 SHEET 1 AA212 VAL D1012 VAL D1022 0 SHEET 2 AA212 HIS D1025 ASP D1036 -1 O PHE D1027 N GLY D1020 SHEET 3 AA212 LYS D1041 CYS D1048 -1 O ILE D1047 N ARG D1030 SHEET 4 AA212 HIS D1217 ALA D1227 -1 O LEU D1220 N LEU D1044 SHEET 5 AA212 HIS D1199 SER D1208 -1 N SER D1202 O THR D1225 SHEET 6 AA212 HIS D1148 ASP D1155 -1 N VAL D1150 O LEU D1201 SHEET 7 AA212 GLY D1160 ASN D1170 -1 O LYS D1162 N THR D1153 SHEET 8 AA212 VAL D1176 PRO D1187 -1 O GLN D1177 N HIS D1169 SHEET 9 AA212 TYR D1092 PHE D1100 -1 N GLU D1095 O GLN D1184 SHEET 10 AA212 THR D1105 GLU D1115 -1 O TYR D1106 N ILE D1098 SHEET 11 AA212 THR D1118 ILE D1128 -1 O VAL D1120 N LYS D1113 SHEET 12 AA212 VAL D1012 VAL D1022 1 N GLU D1017 O ILE D1123 LINK C LEU B1064 N1 CRO B1066 1555 1555 1.37 LINK C3 CRO B1066 N VAL B1068 1555 1555 1.28 LINK C LEU D1064 N1 CRO D1066 1555 1555 1.36 LINK C3 CRO D1066 N VAL D1068 1555 1555 1.28 CISPEP 1 MET B 1088 PRO B 1089 0 7.31 CISPEP 2 MET D 1088 PRO D 1089 0 2.36 SITE 1 AC1 5 GLU A 72 TRP A 75 LYS B1003 PRO B1192 SITE 2 AC1 5 HOH B1401 CRYST1 81.110 124.240 245.330 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012329 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004076 0.00000