HEADER DE NOVO PROTEIN 18-NOV-16 5MFN
TITLE DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: YIIIM5AII;
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;
SOURCE 3 ORGANISM_TAXID: 32630;
SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333
KEYWDS DESIGNED ARMADILLO REPEAT PROTEIN, PEPTIDE BINDING, DE NOVO PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR S.HANSEN,P.ERNST,C.REICHEN,C.EWALD,P.MITTL,A.PLUECKTHUN
REVDAT 3 17-JAN-24 5MFN 1 LINK
REVDAT 2 21-FEB-18 5MFN 1 JRNL
REVDAT 1 13-SEP-17 5MFN 0
JRNL AUTH S.HANSEN,P.ERNST,S.L.B.KONIG,C.REICHEN,C.EWALD,D.NETTELS,
JRNL AUTH 2 P.R.E.MITTL,B.SCHULER,A.PLUCKTHUN
JRNL TITL CURVATURE OF DESIGNED ARMADILLO REPEAT PROTEINS ALLOWS
JRNL TITL 2 MODULAR PEPTIDE BINDING.
JRNL REF J. STRUCT. BIOL. V. 201 108 2018
JRNL REFN ESSN 1095-8657
JRNL PMID 28864298
JRNL DOI 10.1016/J.JSB.2017.08.009
REMARK 2
REMARK 2 RESOLUTION. 2.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.2
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.66
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 21564
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.203
REMARK 3 R VALUE (WORKING SET) : 0.200
REMARK 3 FREE R VALUE : 0.246
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780
REMARK 3 FREE R VALUE TEST SET COUNT : 1030
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 11
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.94
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2791
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2450
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2657
REMARK 3 BIN R VALUE (WORKING SET) : 0.2440
REMARK 3 BIN FREE R VALUE : 0.2680
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 134
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4133
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 21
REMARK 3 SOLVENT ATOMS : 16
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 89.30
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 131.9
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -17.99390
REMARK 3 B22 (A**2) : -17.99390
REMARK 3 B33 (A**2) : 35.98770
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.510
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.523
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.299
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.517
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.303
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 4193 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 5711 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1477 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 177 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 574 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 4193 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 568 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 5292 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.32
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.18
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 24.04
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 85.9610 -12.7425 -13.3171
REMARK 3 T TENSOR
REMARK 3 T11: 0.3595 T22: -0.2690
REMARK 3 T33: 0.1196 T12: -0.2149
REMARK 3 T13: -0.1904 T23: -0.1281
REMARK 3 L TENSOR
REMARK 3 L11: 2.1718 L22: 2.0719
REMARK 3 L33: 3.3199 L12: 0.4105
REMARK 3 L13: -0.0197 L23: -0.4389
REMARK 3 S TENSOR
REMARK 3 S11: -0.1204 S12: -0.2746 S13: 0.5237
REMARK 3 S21: 0.3555 S22: -0.1626 S23: -0.7136
REMARK 3 S31: -1.0760 S32: 0.7811 S33: 0.2830
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 55.2344 -16.6055 3.2766
REMARK 3 T TENSOR
REMARK 3 T11: 0.5278 T22: 0.0918
REMARK 3 T33: -0.1343 T12: 0.1543
REMARK 3 T13: 0.1511 T23: -0.4070
REMARK 3 L TENSOR
REMARK 3 L11: 0.9707 L22: 2.4666
REMARK 3 L33: 4.6092 L12: -0.6344
REMARK 3 L13: -0.8945 L23: -0.2441
REMARK 3 S TENSOR
REMARK 3 S11: -0.1254 S12: -0.5934 S13: 0.3412
REMARK 3 S21: 1.3583 S22: -0.1698 S23: 0.6011
REMARK 3 S31: -1.1507 S32: -1.0512 S33: 0.2951
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5MFN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-16.
REMARK 100 THE DEPOSITION ID IS D_1200002403.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 07-FEB-14
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SLS
REMARK 200 BEAMLINE : X06SA
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21564
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800
REMARK 200 RESOLUTION RANGE LOW (A) : 46.660
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 39.70
REMARK 200 R MERGE (I) : 0.25700
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.6800
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 37.40
REMARK 200 R MERGE FOR SHELL (I) : 7.64300
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.690
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 5MFC
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 64.56
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE 2.4M PH 7.0, 0.2M
REMARK 280 CACL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/2
REMARK 290 6555 X-Y,X,Z+1/2
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z
REMARK 290 10555 -Y,-X,-Z+1/2
REMARK 290 11555 -X+Y,Y,-Z+1/2
REMARK 290 12555 X,X-Y,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.06000
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 71.06000
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.06000
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 71.06000
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 71.06000
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 71.06000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 8
REMARK 465 PRO A 9
REMARK 465 GLY A 10
REMARK 465 SER A 11
REMARK 465 SER A 292
REMARK 465 HIS A 293
REMARK 465 GLY B 8
REMARK 465 PRO B 9
REMARK 465 GLY B 10
REMARK 465 SER B 11
REMARK 465 LEU B 290
REMARK 465 GLN B 291
REMARK 465 SER B 292
REMARK 465 HIS B 293
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ALA A 81 4.57 -63.61
REMARK 500 ILE B 279 39.76 -93.33
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH B 408 DISTANCE = 6.13 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA A 301 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 67 OE2
REMARK 620 2 PRO B 149 O 102.2
REMARK 620 3 GLU B 151 OE1 67.4 82.7
REMARK 620 N 1 2
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA B 302 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 PRO A 107 O
REMARK 620 2 GLU A 109 OE1 68.3
REMARK 620 3 PRO B 107 O 150.3 83.2
REMARK 620 4 GLU B 109 OE1 84.4 70.1 77.8
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA B 301 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 PRO A 149 O
REMARK 620 2 GLU A 151 OE1 77.6
REMARK 620 3 PRO B 65 O 170.8 94.0
REMARK 620 4 GLU B 67 OE2 101.3 74.9 72.5
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MLT A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MLT B 303
DBREF 5MFN A 8 293 PDB 5MFN 5MFN 8 293
DBREF 5MFN B 8 293 PDB 5MFN 5MFN 8 293
SEQRES 1 A 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU
SEQRES 2 A 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG
SEQRES 3 A 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE
SEQRES 4 A 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL
SEQRES 5 A 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU
SEQRES 6 A 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN
SEQRES 7 A 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO
SEQRES 8 A 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE
SEQRES 9 A 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER
SEQRES 10 A 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY
SEQRES 11 A 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN
SEQRES 12 A 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN
SEQRES 13 A 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE
SEQRES 14 A 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER
SEQRES 15 A 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA
SEQRES 16 A 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN
SEQRES 17 A 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN
SEQRES 18 A 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA
SEQRES 19 A 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU
SEQRES 20 A 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS
SEQRES 21 A 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN
SEQRES 22 A 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS
SEQRES 1 B 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU
SEQRES 2 B 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG
SEQRES 3 B 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE
SEQRES 4 B 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL
SEQRES 5 B 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU
SEQRES 6 B 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN
SEQRES 7 B 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO
SEQRES 8 B 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE
SEQRES 9 B 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER
SEQRES 10 B 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY
SEQRES 11 B 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN
SEQRES 12 B 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN
SEQRES 13 B 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE
SEQRES 14 B 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER
SEQRES 15 B 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA
SEQRES 16 B 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN
SEQRES 17 B 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN
SEQRES 18 B 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA
SEQRES 19 B 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU
SEQRES 20 B 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS
SEQRES 21 B 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN
SEQRES 22 B 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS
HET CA A 301 1
HET MLT A 302 9
HET CA B 301 1
HET CA B 302 1
HET MLT B 303 9
HETNAM CA CALCIUM ION
HETNAM MLT D-MALATE
HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID
FORMUL 3 CA 3(CA 2+)
FORMUL 4 MLT 2(C4 H6 O5)
FORMUL 8 HOH *16(H2 O)
HELIX 1 AA1 GLU A 12 LEU A 20 1 9
HELIX 2 AA2 ASP A 24 SER A 40 1 17
HELIX 3 AA3 GLY A 42 ALA A 52 1 11
HELIX 4 AA4 GLY A 53 LEU A 61 1 9
HELIX 5 AA5 LEU A 62 SER A 64 5 3
HELIX 6 AA6 ASN A 66 ALA A 81 1 16
HELIX 7 AA7 GLY A 84 GLY A 95 1 12
HELIX 8 AA8 GLY A 95 LEU A 103 1 9
HELIX 9 AA9 LEU A 104 SER A 106 5 3
HELIX 10 AB1 ASN A 108 ALA A 123 1 16
HELIX 11 AB2 GLY A 126 GLY A 137 1 12
HELIX 12 AB3 GLY A 137 LEU A 145 1 9
HELIX 13 AB4 LEU A 146 SER A 148 5 3
HELIX 14 AB5 ASN A 150 ALA A 165 1 16
HELIX 15 AB6 GLY A 168 ALA A 178 1 11
HELIX 16 AB7 GLY A 179 LEU A 188 1 10
HELIX 17 AB8 ASN A 192 ALA A 207 1 16
HELIX 18 AB9 GLY A 210 ALA A 220 1 11
HELIX 19 AC1 GLY A 221 LEU A 229 1 9
HELIX 20 AC2 LEU A 230 SER A 232 5 3
HELIX 21 AC3 ASN A 234 ALA A 249 1 16
HELIX 22 AC4 GLY A 252 GLU A 261 1 10
HELIX 23 AC5 GLY A 263 GLN A 272 1 10
HELIX 24 AC6 ASN A 276 LYS A 289 1 14
HELIX 25 AC7 LEU B 13 GLN B 19 1 7
HELIX 26 AC8 ASP B 24 GLY B 41 1 18
HELIX 27 AC9 GLY B 42 ALA B 52 1 11
HELIX 28 AD1 GLY B 53 LEU B 61 1 9
HELIX 29 AD2 LEU B 62 SER B 64 5 3
HELIX 30 AD3 ASN B 66 ALA B 81 1 16
HELIX 31 AD4 GLY B 84 GLY B 95 1 12
HELIX 32 AD5 GLY B 95 LEU B 103 1 9
HELIX 33 AD6 LEU B 104 SER B 106 5 3
HELIX 34 AD7 ASN B 108 ALA B 123 1 16
HELIX 35 AD8 GLY B 126 GLY B 137 1 12
HELIX 36 AD9 GLY B 137 LEU B 145 1 9
HELIX 37 AE1 LEU B 146 SER B 148 5 3
HELIX 38 AE2 ASN B 150 ALA B 165 1 16
HELIX 39 AE3 GLY B 168 ALA B 178 1 11
HELIX 40 AE4 GLY B 179 LEU B 188 1 10
HELIX 41 AE5 ASN B 192 ALA B 207 1 16
HELIX 42 AE6 GLY B 210 ALA B 220 1 11
HELIX 43 AE7 GLY B 221 LEU B 229 1 9
HELIX 44 AE8 LEU B 230 SER B 232 5 3
HELIX 45 AE9 ASN B 234 ALA B 249 1 16
HELIX 46 AF1 GLY B 252 GLU B 261 1 10
HELIX 47 AF2 ALA B 264 GLU B 269 1 6
HELIX 48 AF3 GLN B 270 HIS B 274 5 5
HELIX 49 AF4 GLU B 277 GLU B 288 1 12
LINK OE2 GLU A 67 CA CA A 301 1555 1555 2.50
LINK O PRO A 107 CA CA B 302 1555 1555 2.81
LINK OE1 GLU A 109 CA CA B 302 1555 1555 2.62
LINK O PRO A 149 CA CA B 301 1555 1555 2.65
LINK OE1 GLU A 151 CA CA B 301 1555 1555 2.58
LINK CA CA A 301 O PRO B 149 1555 1555 2.42
LINK CA CA A 301 OE1 GLU B 151 1555 1555 2.56
LINK O PRO B 65 CA CA B 301 1555 1555 2.90
LINK OE2 GLU B 67 CA CA B 301 1555 1555 2.35
LINK O PRO B 107 CA CA B 302 1555 1555 2.56
LINK OE1 GLU B 109 CA CA B 302 1555 1555 2.32
SITE 1 AC1 4 PRO A 65 GLU A 67 PRO B 149 GLU B 151
SITE 1 AC2 3 LEU A 146 ALA A 183 GLN A 186
SITE 1 AC3 4 PRO A 149 GLU A 151 PRO B 65 GLU B 67
SITE 1 AC4 4 PRO A 107 GLU A 109 PRO B 107 GLU B 109
SITE 1 AC5 4 LEU B 104 SER B 105 ALA B 141 GLN B 144
CRYST1 142.550 142.550 142.120 90.00 90.00 120.00 P 63 2 2 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007015 0.004050 0.000000 0.00000
SCALE2 0.000000 0.008100 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007036 0.00000