data_5MJE # _entry.id 5MJE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5MJE WWPDB D_1200002563 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5MJE _pdbx_database_status.recvd_initial_deposition_date 2016-11-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hadzi, S.' 1 'Loris, R.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 45 _citation.language ? _citation.page_first 4972 _citation.page_last 4983 _citation.title 'Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkx138 _citation.pdbx_database_id_PubMed 28334932 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hadzi, S.' 1 ? primary 'Garcia-Pino, A.' 2 ? primary 'Haesaerts, S.' 3 ? primary 'Jurenas, D.' 4 ? primary 'Gerdes, K.' 5 ? primary 'Lah, J.' 6 ? primary 'Loris, R.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 104.050 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5MJE _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.290 _cell.length_a_esd ? _cell.length_b 36.570 _cell.length_b_esd ? _cell.length_c 60.800 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MJE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytotoxic translational repressor of toxin-antitoxin stability system' 15066.139 1 ? ? ? ? 2 polymer man 'Nanobody 8' 14367.790 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Toxin HigB-2,Uncharacterized protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSSHHHHHHSSGLVPRGSHMKSVFVESTIFEKYRDEYLSDEEYRLFQAELMLNPKLGDVIQGTGGLRKIRVASKGKGKRG GSRIIYYFLDEKRRFYLLTIYGKNEMSDLNANQRKQLMAFMEAWRNEQS ; ;GSSHHHHHHSSGLVPRGSHMKSVFVESTIFEKYRDEYLSDEEYRLFQAELMLNPKLGDVIQGTGGLRKIRVASKGKGKRG GSRIIYYFLDEKRRFYLLTIYGKNEMSDLNANQRKQLMAFMEAWRNEQS ; A ? 2 'polypeptide(L)' no no ;AQVQLQESGGGLVQPGGSLRLSCVVSGDRRTIYTMGWFRQAPGNQGELVATMTSSGVTTYVDSVKGRFSISRDSAEDSAK NTVSLQMNSLKPEDTAFYTCYEESRRPLGSRNTYWGQGTQVTVSSHHHHHH ; ;AQVQLQESGGGLVQPGGSLRLSCVVSGDRRTIYTMGWFRQAPGNQGELVATMTSSGVTTYVDSVKGRFSISRDSAEDSAK NTVSLQMNSLKPEDTAFYTCYEESRRPLGSRNTYWGQGTQVTVSSHHHHHH ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 SER n 1 11 SER n 1 12 GLY n 1 13 LEU n 1 14 VAL n 1 15 PRO n 1 16 ARG n 1 17 GLY n 1 18 SER n 1 19 HIS n 1 20 MET n 1 21 LYS n 1 22 SER n 1 23 VAL n 1 24 PHE n 1 25 VAL n 1 26 GLU n 1 27 SER n 1 28 THR n 1 29 ILE n 1 30 PHE n 1 31 GLU n 1 32 LYS n 1 33 TYR n 1 34 ARG n 1 35 ASP n 1 36 GLU n 1 37 TYR n 1 38 LEU n 1 39 SER n 1 40 ASP n 1 41 GLU n 1 42 GLU n 1 43 TYR n 1 44 ARG n 1 45 LEU n 1 46 PHE n 1 47 GLN n 1 48 ALA n 1 49 GLU n 1 50 LEU n 1 51 MET n 1 52 LEU n 1 53 ASN n 1 54 PRO n 1 55 LYS n 1 56 LEU n 1 57 GLY n 1 58 ASP n 1 59 VAL n 1 60 ILE n 1 61 GLN n 1 62 GLY n 1 63 THR n 1 64 GLY n 1 65 GLY n 1 66 LEU n 1 67 ARG n 1 68 LYS n 1 69 ILE n 1 70 ARG n 1 71 VAL n 1 72 ALA n 1 73 SER n 1 74 LYS n 1 75 GLY n 1 76 LYS n 1 77 GLY n 1 78 LYS n 1 79 ARG n 1 80 GLY n 1 81 GLY n 1 82 SER n 1 83 ARG n 1 84 ILE n 1 85 ILE n 1 86 TYR n 1 87 TYR n 1 88 PHE n 1 89 LEU n 1 90 ASP n 1 91 GLU n 1 92 LYS n 1 93 ARG n 1 94 ARG n 1 95 PHE n 1 96 TYR n 1 97 LEU n 1 98 LEU n 1 99 THR n 1 100 ILE n 1 101 TYR n 1 102 GLY n 1 103 LYS n 1 104 ASN n 1 105 GLU n 1 106 MET n 1 107 SER n 1 108 ASP n 1 109 LEU n 1 110 ASN n 1 111 ALA n 1 112 ASN n 1 113 GLN n 1 114 ARG n 1 115 LYS n 1 116 GLN n 1 117 LEU n 1 118 MET n 1 119 ALA n 1 120 PHE n 1 121 MET n 1 122 GLU n 1 123 ALA n 1 124 TRP n 1 125 ARG n 1 126 ASN n 1 127 GLU n 1 128 GLN n 1 129 SER n 2 1 ALA n 2 2 GLN n 2 3 VAL n 2 4 GLN n 2 5 LEU n 2 6 GLN n 2 7 GLU n 2 8 SER n 2 9 GLY n 2 10 GLY n 2 11 GLY n 2 12 LEU n 2 13 VAL n 2 14 GLN n 2 15 PRO n 2 16 GLY n 2 17 GLY n 2 18 SER n 2 19 LEU n 2 20 ARG n 2 21 LEU n 2 22 SER n 2 23 CYS n 2 24 VAL n 2 25 VAL n 2 26 SER n 2 27 GLY n 2 28 ASP n 2 29 ARG n 2 30 ARG n 2 31 THR n 2 32 ILE n 2 33 TYR n 2 34 THR n 2 35 MET n 2 36 GLY n 2 37 TRP n 2 38 PHE n 2 39 ARG n 2 40 GLN n 2 41 ALA n 2 42 PRO n 2 43 GLY n 2 44 ASN n 2 45 GLN n 2 46 GLY n 2 47 GLU n 2 48 LEU n 2 49 VAL n 2 50 ALA n 2 51 THR n 2 52 MET n 2 53 THR n 2 54 SER n 2 55 SER n 2 56 GLY n 2 57 VAL n 2 58 THR n 2 59 THR n 2 60 TYR n 2 61 VAL n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 SER n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 SER n 2 75 ALA n 2 76 GLU n 2 77 ASP n 2 78 SER n 2 79 ALA n 2 80 LYS n 2 81 ASN n 2 82 THR n 2 83 VAL n 2 84 SER n 2 85 LEU n 2 86 GLN n 2 87 MET n 2 88 ASN n 2 89 SER n 2 90 LEU n 2 91 LYS n 2 92 PRO n 2 93 GLU n 2 94 ASP n 2 95 THR n 2 96 ALA n 2 97 PHE n 2 98 TYR n 2 99 THR n 2 100 CYS n 2 101 TYR n 2 102 GLU n 2 103 GLU n 2 104 SER n 2 105 ARG n 2 106 ARG n 2 107 PRO n 2 108 LEU n 2 109 GLY n 2 110 SER n 2 111 ARG n 2 112 ASN n 2 113 THR n 2 114 TYR n 2 115 TRP n 2 116 GLY n 2 117 GLN n 2 118 GLY n 2 119 THR n 2 120 GLN n 2 121 VAL n 2 122 THR n 2 123 VAL n 2 124 SER n 2 125 SER n 2 126 HIS n 2 127 HIS n 2 128 HIS n 2 129 HIS n 2 130 HIS n 2 131 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 129 ? ? ;EN12_16040, ERS013138_03879, ERS013140_03929, ERS013166_04476, ERS013173_04173, ERS013186_03907, ERS013199_03648, ERS013200_04302, ERS013207_03773 ; ? ? ? ? ? ? 'Vibrio cholerae' 666 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 131 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A085RXT0_VIBCL A0A085RXT0 ? 1 ;MKSVFVESTIFEKYRDEYLSDEEYRLFQAELMLNPKLGDVIQGTGGLRKIRVASKGKGKRGGSRIIYYFLDEKRRFYLLT IYGKNEMSDLNANQRKQLMAFMEAWRNEQS ; 1 2 PDB 5MJE 5MJE ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5MJE A 20 ? 129 ? A0A085RXT0 1 ? 110 ? 1 110 2 2 5MJE B 1 ? 131 ? 5MJE 2 ? 132 ? 2 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5MJE GLY A 1 ? UNP A0A085RXT0 ? ? 'expression tag' -18 1 1 5MJE SER A 2 ? UNP A0A085RXT0 ? ? 'expression tag' -17 2 1 5MJE SER A 3 ? UNP A0A085RXT0 ? ? 'expression tag' -16 3 1 5MJE HIS A 4 ? UNP A0A085RXT0 ? ? 'expression tag' -15 4 1 5MJE HIS A 5 ? UNP A0A085RXT0 ? ? 'expression tag' -14 5 1 5MJE HIS A 6 ? UNP A0A085RXT0 ? ? 'expression tag' -13 6 1 5MJE HIS A 7 ? UNP A0A085RXT0 ? ? 'expression tag' -12 7 1 5MJE HIS A 8 ? UNP A0A085RXT0 ? ? 'expression tag' -11 8 1 5MJE HIS A 9 ? UNP A0A085RXT0 ? ? 'expression tag' -10 9 1 5MJE SER A 10 ? UNP A0A085RXT0 ? ? 'expression tag' -9 10 1 5MJE SER A 11 ? UNP A0A085RXT0 ? ? 'expression tag' -8 11 1 5MJE GLY A 12 ? UNP A0A085RXT0 ? ? 'expression tag' -7 12 1 5MJE LEU A 13 ? UNP A0A085RXT0 ? ? 'expression tag' -6 13 1 5MJE VAL A 14 ? UNP A0A085RXT0 ? ? 'expression tag' -5 14 1 5MJE PRO A 15 ? UNP A0A085RXT0 ? ? 'expression tag' -4 15 1 5MJE ARG A 16 ? UNP A0A085RXT0 ? ? 'expression tag' -3 16 1 5MJE GLY A 17 ? UNP A0A085RXT0 ? ? 'expression tag' -2 17 1 5MJE SER A 18 ? UNP A0A085RXT0 ? ? 'expression tag' -1 18 1 5MJE HIS A 19 ? UNP A0A085RXT0 ? ? 'expression tag' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5MJE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M Ammonium sulfate; 0,1 M sodium acetate pH 4.6; 30% PEG monomethyl ether 2000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9790 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9790 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate 42.44 _reflns.entry_id 5MJE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.5990 _reflns.d_resolution_low 46.5 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7617 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.52 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.39 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.98 _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 170.340 _refine.B_iso_mean 59.5379 _refine.B_iso_min 19.750 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5MJE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5990 _refine.ls_d_res_low 46.4690 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7605 _refine.ls_number_reflns_R_free 379 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.9400 _refine.ls_percent_reflns_R_free 4.9800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2307 _refine.ls_R_factor_R_free 0.2965 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2271 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.370 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.8700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.5990 _refine_hist.d_res_low 46.4690 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 1837 _refine_hist.pdbx_number_residues_total 235 _refine_hist.pdbx_B_iso_mean_ligand 81.17 _refine_hist.pdbx_B_iso_mean_solvent 38.51 _refine_hist.pdbx_number_atoms_protein 1808 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1851 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.954 ? 2495 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.050 ? 271 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 323 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 20.514 ? 1097 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5988 2.9748 2453 . 122 2331 97.0000 . . . 0.4013 0.0000 0.3221 . . . . . . 3 . . . 'X-RAY DIFFRACTION' 2.9748 3.7477 2550 . 126 2424 99.0000 . . . 0.3029 0.0000 0.2333 . . . . . . 3 . . . 'X-RAY DIFFRACTION' 3.7477 46.4766 2602 . 131 2471 98.0000 . . . 0.2581 0.0000 0.1923 . . . . . . 3 . . . # _struct.entry_id 5MJE _struct.title 'Crystal structure of the HigB2 toxin in complex with Nb8' _struct.pdbx_descriptor 'Cytotoxic translational repressor of toxin-antitoxin stability system, Nanobody 8' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5MJE _struct_keywords.text 'toxin-antitoxin system, toxin' _struct_keywords.pdbx_keywords TOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 27 ? ARG A 34 ? SER A 8 ARG A 15 1 ? 8 HELX_P HELX_P2 AA2 SER A 39 ? ASN A 53 ? SER A 20 ASN A 34 1 ? 15 HELX_P HELX_P3 AA3 ASN A 110 ? ASN A 126 ? ASN A 91 ASN A 107 1 ? 17 HELX_P HELX_P4 AA4 ASP B 62 ? LYS B 65 ? ASP B 63 LYS B 66 5 ? 4 HELX_P HELX_P5 AA5 SER B 74 ? SER B 78 ? SER B 75 SER B 79 5 ? 5 HELX_P HELX_P6 AA6 LYS B 91 ? THR B 95 ? LYS B 92 THR B 96 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 100 SG ? ? B CYS 24 B CYS 101 1_555 ? ? ? ? ? ? ? 2.044 ? covale1 covale none ? A ARG 83 NE ? ? ? 1_555 D SO4 . O4 ? ? A ARG 64 A SO4 202 1_555 ? ? ? ? ? ? ? 1.301 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 10 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel AA2 9 10 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 58 ? VAL A 59 ? ASP A 39 VAL A 40 AA1 2 ARG A 67 ? ILE A 69 ? ARG A 48 ILE A 50 AA1 3 ARG A 83 ? PHE A 88 ? ARG A 64 PHE A 69 AA1 4 ARG A 94 ? TYR A 101 ? ARG A 75 TYR A 82 AA1 5 SER A 22 ? GLU A 26 ? SER A 3 GLU A 7 AA1 6 ARG B 111 ? TRP B 115 ? ARG B 112 TRP B 116 AA1 7 ALA B 96 ? ARG B 105 ? ALA B 97 ARG B 106 AA1 8 THR B 119 ? VAL B 123 ? THR B 120 VAL B 124 AA1 9 GLY B 11 ? VAL B 13 ? GLY B 12 VAL B 14 AA2 1 ASP A 58 ? VAL A 59 ? ASP A 39 VAL A 40 AA2 2 ARG A 67 ? ILE A 69 ? ARG A 48 ILE A 50 AA2 3 ARG A 83 ? PHE A 88 ? ARG A 64 PHE A 69 AA2 4 ARG A 94 ? TYR A 101 ? ARG A 75 TYR A 82 AA2 5 SER A 22 ? GLU A 26 ? SER A 3 GLU A 7 AA2 6 ARG B 111 ? TRP B 115 ? ARG B 112 TRP B 116 AA2 7 ALA B 96 ? ARG B 105 ? ALA B 97 ARG B 106 AA2 8 THR B 31 ? GLN B 40 ? THR B 32 GLN B 41 AA2 9 GLU B 47 ? THR B 53 ? GLU B 48 THR B 54 AA2 10 THR B 58 ? TYR B 60 ? THR B 59 TYR B 61 AA3 1 GLN B 4 ? SER B 8 ? GLN B 5 SER B 9 AA3 2 LEU B 19 ? SER B 26 ? LEU B 20 SER B 27 AA3 3 ASN B 81 ? MET B 87 ? ASN B 82 MET B 88 AA3 4 PHE B 68 ? ASP B 73 ? PHE B 69 ASP B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 58 ? N ASP A 39 O LYS A 68 ? O LYS A 49 AA1 2 3 N ARG A 67 ? N ARG A 48 O TYR A 86 ? O TYR A 67 AA1 3 4 N TYR A 87 ? N TYR A 68 O TYR A 96 ? O TYR A 77 AA1 4 5 O PHE A 95 ? O PHE A 76 N VAL A 23 ? N VAL A 4 AA1 5 6 N SER A 22 ? N SER A 3 O TRP B 115 ? O TRP B 116 AA1 6 7 O ASN B 112 ? O ASN B 113 N SER B 104 ? N SER B 105 AA1 7 8 N TYR B 98 ? N TYR B 99 O THR B 119 ? O THR B 120 AA1 8 9 O THR B 122 ? O THR B 123 N VAL B 13 ? N VAL B 14 AA2 1 2 N ASP A 58 ? N ASP A 39 O LYS A 68 ? O LYS A 49 AA2 2 3 N ARG A 67 ? N ARG A 48 O TYR A 86 ? O TYR A 67 AA2 3 4 N TYR A 87 ? N TYR A 68 O TYR A 96 ? O TYR A 77 AA2 4 5 O PHE A 95 ? O PHE A 76 N VAL A 23 ? N VAL A 4 AA2 5 6 N SER A 22 ? N SER A 3 O TRP B 115 ? O TRP B 116 AA2 6 7 O ASN B 112 ? O ASN B 113 N SER B 104 ? N SER B 105 AA2 7 8 O GLU B 103 ? O GLU B 104 N THR B 34 ? N THR B 35 AA2 8 9 N ARG B 39 ? N ARG B 40 O GLU B 47 ? O GLU B 48 AA2 9 10 N THR B 51 ? N THR B 52 O THR B 59 ? O THR B 60 AA3 1 2 N GLN B 6 ? N GLN B 7 O VAL B 24 ? O VAL B 25 AA3 2 3 N CYS B 23 ? N CYS B 24 O VAL B 83 ? O VAL B 84 AA3 3 4 O SER B 84 ? O SER B 85 N SER B 71 ? N SER B 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PEG 201 ? 4 'binding site for residue PEG A 201' AC2 Software A SO4 202 ? 2 'binding site for residue SO4 A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LEU A 13 ? LEU A -6 . ? 1_545 ? 2 AC1 4 SER A 39 ? SER A 20 . ? 1_555 ? 3 AC1 4 ASP A 40 ? ASP A 21 . ? 1_555 ? 4 AC1 4 GLU A 41 ? GLU A 22 . ? 1_555 ? 5 AC2 2 LYS A 68 ? LYS A 49 . ? 1_555 ? 6 AC2 2 ARG A 83 ? ARG A 64 . ? 1_555 ? # _atom_sites.entry_id 5MJE _atom_sites.fract_transf_matrix[1][1] 0.017455 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004368 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027345 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016955 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -18 ? ? ? A . n A 1 2 SER 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 HIS 4 -15 ? ? ? A . n A 1 5 HIS 5 -14 ? ? ? A . n A 1 6 HIS 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 SER 10 -9 ? ? ? A . n A 1 11 SER 11 -8 ? ? ? A . n A 1 12 GLY 12 -7 -7 GLY GLY A . n A 1 13 LEU 13 -6 -6 LEU LEU A . n A 1 14 VAL 14 -5 -5 VAL VAL A . n A 1 15 PRO 15 -4 -4 PRO PRO A . n A 1 16 ARG 16 -3 -3 ARG ARG A . n A 1 17 GLY 17 -2 -2 GLY GLY A . n A 1 18 SER 18 -1 -1 SER SER A . n A 1 19 HIS 19 0 0 HIS HIS A . n A 1 20 MET 20 1 1 MET MET A . n A 1 21 LYS 21 2 2 LYS LYS A . n A 1 22 SER 22 3 3 SER SER A . n A 1 23 VAL 23 4 4 VAL VAL A . n A 1 24 PHE 24 5 5 PHE PHE A . n A 1 25 VAL 25 6 6 VAL VAL A . n A 1 26 GLU 26 7 7 GLU GLU A . n A 1 27 SER 27 8 8 SER SER A . n A 1 28 THR 28 9 9 THR THR A . n A 1 29 ILE 29 10 10 ILE ILE A . n A 1 30 PHE 30 11 11 PHE PHE A . n A 1 31 GLU 31 12 12 GLU GLU A . n A 1 32 LYS 32 13 13 LYS LYS A . n A 1 33 TYR 33 14 14 TYR TYR A . n A 1 34 ARG 34 15 15 ARG ARG A . n A 1 35 ASP 35 16 16 ASP ASP A . n A 1 36 GLU 36 17 17 GLU GLU A . n A 1 37 TYR 37 18 18 TYR TYR A . n A 1 38 LEU 38 19 19 LEU LEU A . n A 1 39 SER 39 20 20 SER SER A . n A 1 40 ASP 40 21 21 ASP ASP A . n A 1 41 GLU 41 22 22 GLU GLU A . n A 1 42 GLU 42 23 23 GLU GLU A . n A 1 43 TYR 43 24 24 TYR TYR A . n A 1 44 ARG 44 25 25 ARG ARG A . n A 1 45 LEU 45 26 26 LEU LEU A . n A 1 46 PHE 46 27 27 PHE PHE A . n A 1 47 GLN 47 28 28 GLN GLN A . n A 1 48 ALA 48 29 29 ALA ALA A . n A 1 49 GLU 49 30 30 GLU GLU A . n A 1 50 LEU 50 31 31 LEU LEU A . n A 1 51 MET 51 32 32 MET MET A . n A 1 52 LEU 52 33 33 LEU LEU A . n A 1 53 ASN 53 34 34 ASN ASN A . n A 1 54 PRO 54 35 35 PRO PRO A . n A 1 55 LYS 55 36 36 LYS LYS A . n A 1 56 LEU 56 37 37 LEU LEU A . n A 1 57 GLY 57 38 38 GLY GLY A . n A 1 58 ASP 58 39 39 ASP ASP A . n A 1 59 VAL 59 40 40 VAL VAL A . n A 1 60 ILE 60 41 41 ILE ILE A . n A 1 61 GLN 61 42 42 GLN GLN A . n A 1 62 GLY 62 43 43 GLY GLY A . n A 1 63 THR 63 44 44 THR THR A . n A 1 64 GLY 64 45 45 GLY GLY A . n A 1 65 GLY 65 46 46 GLY GLY A . n A 1 66 LEU 66 47 47 LEU LEU A . n A 1 67 ARG 67 48 48 ARG ARG A . n A 1 68 LYS 68 49 49 LYS LYS A . n A 1 69 ILE 69 50 50 ILE ILE A . n A 1 70 ARG 70 51 51 ARG ARG A . n A 1 71 VAL 71 52 52 VAL VAL A . n A 1 72 ALA 72 53 53 ALA ALA A . n A 1 73 SER 73 54 ? ? ? A . n A 1 74 LYS 74 55 ? ? ? A . n A 1 75 GLY 75 56 ? ? ? A . n A 1 76 LYS 76 57 ? ? ? A . n A 1 77 GLY 77 58 ? ? ? A . n A 1 78 LYS 78 59 ? ? ? A . n A 1 79 ARG 79 60 ? ? ? A . n A 1 80 GLY 80 61 61 GLY GLY A . n A 1 81 GLY 81 62 62 GLY GLY A . n A 1 82 SER 82 63 63 SER SER A . n A 1 83 ARG 83 64 64 ARG ARG A . n A 1 84 ILE 84 65 65 ILE ILE A . n A 1 85 ILE 85 66 66 ILE ILE A . n A 1 86 TYR 86 67 67 TYR TYR A . n A 1 87 TYR 87 68 68 TYR TYR A . n A 1 88 PHE 88 69 69 PHE PHE A . n A 1 89 LEU 89 70 70 LEU LEU A . n A 1 90 ASP 90 71 71 ASP ASP A . n A 1 91 GLU 91 72 72 GLU GLU A . n A 1 92 LYS 92 73 73 LYS LYS A . n A 1 93 ARG 93 74 74 ARG ARG A . n A 1 94 ARG 94 75 75 ARG ARG A . n A 1 95 PHE 95 76 76 PHE PHE A . n A 1 96 TYR 96 77 77 TYR TYR A . n A 1 97 LEU 97 78 78 LEU LEU A . n A 1 98 LEU 98 79 79 LEU LEU A . n A 1 99 THR 99 80 80 THR THR A . n A 1 100 ILE 100 81 81 ILE ILE A . n A 1 101 TYR 101 82 82 TYR TYR A . n A 1 102 GLY 102 83 83 GLY GLY A . n A 1 103 LYS 103 84 84 LYS LYS A . n A 1 104 ASN 104 85 85 ASN ASN A . n A 1 105 GLU 105 86 86 GLU GLU A . n A 1 106 MET 106 87 87 MET MET A . n A 1 107 SER 107 88 88 SER SER A . n A 1 108 ASP 108 89 89 ASP ASP A . n A 1 109 LEU 109 90 90 LEU LEU A . n A 1 110 ASN 110 91 91 ASN ASN A . n A 1 111 ALA 111 92 92 ALA ALA A . n A 1 112 ASN 112 93 93 ASN ASN A . n A 1 113 GLN 113 94 94 GLN GLN A . n A 1 114 ARG 114 95 95 ARG ARG A . n A 1 115 LYS 115 96 96 LYS LYS A . n A 1 116 GLN 116 97 97 GLN GLN A . n A 1 117 LEU 117 98 98 LEU LEU A . n A 1 118 MET 118 99 99 MET MET A . n A 1 119 ALA 119 100 100 ALA ALA A . n A 1 120 PHE 120 101 101 PHE PHE A . n A 1 121 MET 121 102 102 MET MET A . n A 1 122 GLU 122 103 103 GLU GLU A . n A 1 123 ALA 123 104 104 ALA ALA A . n A 1 124 TRP 124 105 105 TRP TRP A . n A 1 125 ARG 125 106 106 ARG ARG A . n A 1 126 ASN 126 107 107 ASN ASN A . n A 1 127 GLU 127 108 108 GLU GLU A . n A 1 128 GLN 128 109 109 GLN GLN A . n A 1 129 SER 129 110 110 SER SER A . n B 2 1 ALA 1 2 ? ? ? B . n B 2 2 GLN 2 3 3 GLN GLN B . n B 2 3 VAL 3 4 4 VAL VAL B . n B 2 4 GLN 4 5 5 GLN GLN B . n B 2 5 LEU 5 6 6 LEU LEU B . n B 2 6 GLN 6 7 7 GLN GLN B . n B 2 7 GLU 7 8 8 GLU GLU B . n B 2 8 SER 8 9 9 SER SER B . n B 2 9 GLY 9 10 10 GLY GLY B . n B 2 10 GLY 10 11 11 GLY GLY B . n B 2 11 GLY 11 12 12 GLY GLY B . n B 2 12 LEU 12 13 13 LEU LEU B . n B 2 13 VAL 13 14 14 VAL VAL B . n B 2 14 GLN 14 15 15 GLN GLN B . n B 2 15 PRO 15 16 16 PRO PRO B . n B 2 16 GLY 16 17 17 GLY GLY B . n B 2 17 GLY 17 18 18 GLY GLY B . n B 2 18 SER 18 19 19 SER SER B . n B 2 19 LEU 19 20 20 LEU LEU B . n B 2 20 ARG 20 21 21 ARG ARG B . n B 2 21 LEU 21 22 22 LEU LEU B . n B 2 22 SER 22 23 23 SER SER B . n B 2 23 CYS 23 24 24 CYS CYS B . n B 2 24 VAL 24 25 25 VAL VAL B . n B 2 25 VAL 25 26 26 VAL VAL B . n B 2 26 SER 26 27 27 SER SER B . n B 2 27 GLY 27 28 28 GLY GLY B . n B 2 28 ASP 28 29 29 ASP ASP B . n B 2 29 ARG 29 30 30 ARG ARG B . n B 2 30 ARG 30 31 31 ARG ARG B . n B 2 31 THR 31 32 32 THR THR B . n B 2 32 ILE 32 33 33 ILE ILE B . n B 2 33 TYR 33 34 34 TYR TYR B . n B 2 34 THR 34 35 35 THR THR B . n B 2 35 MET 35 36 36 MET MET B . n B 2 36 GLY 36 37 37 GLY GLY B . n B 2 37 TRP 37 38 38 TRP TRP B . n B 2 38 PHE 38 39 39 PHE PHE B . n B 2 39 ARG 39 40 40 ARG ARG B . n B 2 40 GLN 40 41 41 GLN GLN B . n B 2 41 ALA 41 42 42 ALA ALA B . n B 2 42 PRO 42 43 43 PRO PRO B . n B 2 43 GLY 43 44 44 GLY GLY B . n B 2 44 ASN 44 45 45 ASN ASN B . n B 2 45 GLN 45 46 46 GLN GLN B . n B 2 46 GLY 46 47 47 GLY GLY B . n B 2 47 GLU 47 48 48 GLU GLU B . n B 2 48 LEU 48 49 49 LEU LEU B . n B 2 49 VAL 49 50 50 VAL VAL B . n B 2 50 ALA 50 51 51 ALA ALA B . n B 2 51 THR 51 52 52 THR THR B . n B 2 52 MET 52 53 53 MET MET B . n B 2 53 THR 53 54 54 THR THR B . n B 2 54 SER 54 55 55 SER SER B . n B 2 55 SER 55 56 56 SER SER B . n B 2 56 GLY 56 57 57 GLY GLY B . n B 2 57 VAL 57 58 58 VAL VAL B . n B 2 58 THR 58 59 59 THR THR B . n B 2 59 THR 59 60 60 THR THR B . n B 2 60 TYR 60 61 61 TYR TYR B . n B 2 61 VAL 61 62 62 VAL VAL B . n B 2 62 ASP 62 63 63 ASP ASP B . n B 2 63 SER 63 64 64 SER SER B . n B 2 64 VAL 64 65 65 VAL VAL B . n B 2 65 LYS 65 66 66 LYS LYS B . n B 2 66 GLY 66 67 67 GLY GLY B . n B 2 67 ARG 67 68 68 ARG ARG B . n B 2 68 PHE 68 69 69 PHE PHE B . n B 2 69 SER 69 70 70 SER SER B . n B 2 70 ILE 70 71 71 ILE ILE B . n B 2 71 SER 71 72 72 SER SER B . n B 2 72 ARG 72 73 73 ARG ARG B . n B 2 73 ASP 73 74 74 ASP ASP B . n B 2 74 SER 74 75 75 SER SER B . n B 2 75 ALA 75 76 76 ALA ALA B . n B 2 76 GLU 76 77 77 GLU GLU B . n B 2 77 ASP 77 78 78 ASP ASP B . n B 2 78 SER 78 79 79 SER SER B . n B 2 79 ALA 79 80 80 ALA ALA B . n B 2 80 LYS 80 81 81 LYS LYS B . n B 2 81 ASN 81 82 82 ASN ASN B . n B 2 82 THR 82 83 83 THR THR B . n B 2 83 VAL 83 84 84 VAL VAL B . n B 2 84 SER 84 85 85 SER SER B . n B 2 85 LEU 85 86 86 LEU LEU B . n B 2 86 GLN 86 87 87 GLN GLN B . n B 2 87 MET 87 88 88 MET MET B . n B 2 88 ASN 88 89 89 ASN ASN B . n B 2 89 SER 89 90 90 SER SER B . n B 2 90 LEU 90 91 91 LEU LEU B . n B 2 91 LYS 91 92 92 LYS LYS B . n B 2 92 PRO 92 93 93 PRO PRO B . n B 2 93 GLU 93 94 94 GLU GLU B . n B 2 94 ASP 94 95 95 ASP ASP B . n B 2 95 THR 95 96 96 THR THR B . n B 2 96 ALA 96 97 97 ALA ALA B . n B 2 97 PHE 97 98 98 PHE PHE B . n B 2 98 TYR 98 99 99 TYR TYR B . n B 2 99 THR 99 100 100 THR THR B . n B 2 100 CYS 100 101 101 CYS CYS B . n B 2 101 TYR 101 102 102 TYR TYR B . n B 2 102 GLU 102 103 103 GLU GLU B . n B 2 103 GLU 103 104 104 GLU GLU B . n B 2 104 SER 104 105 105 SER SER B . n B 2 105 ARG 105 106 106 ARG ARG B . n B 2 106 ARG 106 107 107 ARG ARG B . n B 2 107 PRO 107 108 108 PRO PRO B . n B 2 108 LEU 108 109 109 LEU LEU B . n B 2 109 GLY 109 110 110 GLY GLY B . n B 2 110 SER 110 111 111 SER SER B . n B 2 111 ARG 111 112 112 ARG ARG B . n B 2 112 ASN 112 113 113 ASN ASN B . n B 2 113 THR 113 114 114 THR THR B . n B 2 114 TYR 114 115 115 TYR TYR B . n B 2 115 TRP 115 116 116 TRP TRP B . n B 2 116 GLY 116 117 117 GLY GLY B . n B 2 117 GLN 117 118 118 GLN GLN B . n B 2 118 GLY 118 119 119 GLY GLY B . n B 2 119 THR 119 120 120 THR THR B . n B 2 120 GLN 120 121 121 GLN GLN B . n B 2 121 VAL 121 122 122 VAL VAL B . n B 2 122 THR 122 123 123 THR THR B . n B 2 123 VAL 123 124 124 VAL VAL B . n B 2 124 SER 124 125 125 SER SER B . n B 2 125 SER 125 126 126 SER SER B . n B 2 126 HIS 126 127 ? ? ? B . n B 2 127 HIS 127 128 ? ? ? B . n B 2 128 HIS 128 129 ? ? ? B . n B 2 129 HIS 129 130 ? ? ? B . n B 2 130 HIS 130 131 ? ? ? B . n B 2 131 HIS 131 132 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PEG 1 201 1 PEG PEG A . D 4 SO4 1 202 1 SO4 SO4 A . E 5 HOH 1 301 16 HOH HOH A . E 5 HOH 2 302 7 HOH HOH A . E 5 HOH 3 303 23 HOH HOH A . E 5 HOH 4 304 9 HOH HOH A . E 5 HOH 5 305 5 HOH HOH A . E 5 HOH 6 306 24 HOH HOH A . E 5 HOH 7 307 25 HOH HOH A . F 5 HOH 1 201 19 HOH HOH B . F 5 HOH 2 202 29 HOH HOH B . F 5 HOH 3 203 26 HOH HOH B . F 5 HOH 4 204 27 HOH HOH B . F 5 HOH 5 205 18 HOH HOH B . F 5 HOH 6 206 28 HOH HOH B . F 5 HOH 7 207 20 HOH HOH B . F 5 HOH 8 208 22 HOH HOH B . F 5 HOH 9 209 17 HOH HOH B . F 5 HOH 10 210 21 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2570 ? 1 MORE -16 ? 1 'SSA (A^2)' 11590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-05 2 'Structure model' 1 1 2017-05-17 3 'Structure model' 1 2 2019-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category reflns_shell # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 37.5343 27.5276 -47.3037 0.6275 0.3864 1.0454 -0.0124 -0.4393 0.0670 2.2933 2.0471 0.6329 0.2887 0.1242 -0.5611 -0.2111 0.3645 0.0932 0.2601 0.4168 2.0032 -1.6502 -0.1096 -0.1223 'X-RAY DIFFRACTION' 2 ? refined 53.1992 35.0406 -33.5261 0.2002 0.3063 0.3561 0.0421 0.0184 0.0175 2.2102 4.4544 0.7326 0.8917 0.3241 -0.1461 0.0172 0.0717 -0.0606 -0.2352 0.0194 0.8199 -0.3797 0.1025 0.0541 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -7 A 110 ;chain 'A' and (resid -7 through 110 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 3 B 126 ;chain 'B' and (resid 3 through 126 ) ; ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C B GLY 12 ? ? CA B LEU 13 ? ? 1.80 2 1 OG B SER 9 ? ? O B HOH 201 ? ? 1.86 3 1 NH1 B ARG 30 ? ? O B HOH 202 ? ? 1.99 4 1 CZ A ARG 64 ? ? O4 A SO4 202 ? ? 2.05 5 1 OD1 B ASP 29 ? ? O B HOH 203 ? ? 2.07 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C B GLY 12 ? ? N B LEU 13 ? ? 0.796 1.336 -0.540 0.023 Y 2 1 C B LEU 13 ? ? N B VAL 14 ? ? 1.522 1.336 0.186 0.023 Y 3 1 C B SER 23 ? ? N B CYS 24 ? ? 1.097 1.336 -0.239 0.023 Y 4 1 C B MET 36 ? ? N B GLY 37 ? ? 1.180 1.336 -0.156 0.023 Y 5 1 C B PHE 69 ? ? N B SER 70 ? ? 1.053 1.336 -0.283 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C B GLY 12 ? ? N B LEU 13 ? ? CA B LEU 13 ? ? 102.22 121.70 -19.48 2.50 Y 2 1 CA B LEU 13 ? ? C B LEU 13 ? ? N B VAL 14 ? ? 134.31 117.20 17.11 2.20 Y 3 1 O B LEU 13 ? ? C B LEU 13 ? ? N B VAL 14 ? ? 102.58 122.70 -20.12 1.60 Y 4 1 C B LEU 13 ? ? N B VAL 14 ? ? CA B VAL 14 ? ? 137.43 121.70 15.73 2.50 Y 5 1 CA B SER 23 ? ? C B SER 23 ? ? N B CYS 24 ? ? 132.96 117.20 15.76 2.20 Y 6 1 O B SER 23 ? ? C B SER 23 ? ? N B CYS 24 ? ? 106.68 122.70 -16.02 1.60 Y 7 1 CA B MET 36 ? ? C B MET 36 ? ? N B GLY 37 ? ? 128.75 116.20 12.55 2.00 Y 8 1 O B MET 36 ? ? C B MET 36 ? ? N B GLY 37 ? ? 108.67 123.20 -14.53 1.70 Y 9 1 O B PHE 69 ? ? C B PHE 69 ? ? N B SER 70 ? ? 109.04 122.70 -13.66 1.60 Y 10 1 C B PHE 69 ? ? N B SER 70 ? ? CA B SER 70 ? ? 148.04 121.70 26.34 2.50 Y 11 1 O B SER 70 ? ? C B SER 70 ? ? N B ILE 71 ? ? 108.02 122.70 -14.68 1.60 Y 12 1 CA B SER 105 ? ? C B SER 105 ? ? N B ARG 106 ? ? 138.62 117.20 21.42 2.20 Y 13 1 O B SER 105 ? ? C B SER 105 ? ? N B ARG 106 ? ? 101.07 122.70 -21.63 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 36 ? ? 86.88 6.08 2 1 GLU A 86 ? ? -76.40 -167.53 3 1 CYS B 24 ? ? -179.24 120.33 4 1 ASP B 29 ? ? -104.22 -169.39 5 1 MET B 36 ? ? -173.82 147.16 6 1 GLU B 77 ? ? 62.66 -6.11 7 1 ASP B 78 ? ? 70.21 -5.68 8 1 ALA B 80 ? ? 62.77 -124.12 9 1 LEU B 109 ? ? 50.46 18.26 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU B 13 ? ? VAL B 14 ? ? -148.06 2 1 ASP B 78 ? ? SER B 79 ? ? 146.82 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 GLY B 12 ? ? -16.67 2 1 LEU B 13 ? ? 11.73 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C B GLY 12 ? ? N B LEU 13 ? ? 0.80 2 1 C B SER 23 ? ? N B CYS 24 ? ? 1.10 3 1 C B MET 36 ? ? N B GLY 37 ? ? 1.18 4 1 C B PHE 69 ? ? N B SER 70 ? ? 1.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG -3 ? CG ? A ARG 16 CG 2 1 Y 1 A ARG -3 ? CD ? A ARG 16 CD 3 1 Y 1 A ARG -3 ? NE ? A ARG 16 NE 4 1 Y 1 A ARG -3 ? CZ ? A ARG 16 CZ 5 1 Y 1 A ARG -3 ? NH1 ? A ARG 16 NH1 6 1 Y 1 A ARG -3 ? NH2 ? A ARG 16 NH2 7 1 Y 1 A ARG 51 ? CG ? A ARG 70 CG 8 1 Y 1 A ARG 51 ? CD ? A ARG 70 CD 9 1 Y 1 A ARG 51 ? NE ? A ARG 70 NE 10 1 Y 1 A ARG 51 ? CZ ? A ARG 70 CZ 11 1 Y 1 A ARG 51 ? NH1 ? A ARG 70 NH1 12 1 Y 1 A ARG 51 ? NH2 ? A ARG 70 NH2 13 1 Y 1 A GLU 72 ? CG ? A GLU 91 CG 14 1 Y 1 A GLU 72 ? CD ? A GLU 91 CD 15 1 Y 1 A GLU 72 ? OE1 ? A GLU 91 OE1 16 1 Y 1 A GLU 72 ? OE2 ? A GLU 91 OE2 17 1 Y 1 A LYS 73 ? CG ? A LYS 92 CG 18 1 Y 1 A LYS 73 ? CD ? A LYS 92 CD 19 1 Y 1 A LYS 73 ? CE ? A LYS 92 CE 20 1 Y 1 A LYS 73 ? NZ ? A LYS 92 NZ 21 1 Y 1 A LYS 84 ? CG ? A LYS 103 CG 22 1 Y 1 A LYS 84 ? CD ? A LYS 103 CD 23 1 Y 1 A LYS 84 ? CE ? A LYS 103 CE 24 1 Y 1 A LYS 84 ? NZ ? A LYS 103 NZ 25 1 Y 1 A ASN 85 ? CG ? A ASN 104 CG 26 1 Y 1 A ASN 85 ? OD1 ? A ASN 104 OD1 27 1 Y 1 A ASN 85 ? ND2 ? A ASN 104 ND2 28 1 Y 1 A GLU 86 ? CG ? A GLU 105 CG 29 1 Y 1 A GLU 86 ? CD ? A GLU 105 CD 30 1 Y 1 A GLU 86 ? OE1 ? A GLU 105 OE1 31 1 Y 1 A GLU 86 ? OE2 ? A GLU 105 OE2 32 1 Y 1 A MET 87 ? CG ? A MET 106 CG 33 1 Y 1 A MET 87 ? SD ? A MET 106 SD 34 1 Y 1 A MET 87 ? CE ? A MET 106 CE 35 1 Y 1 A SER 88 ? OG ? A SER 107 OG 36 1 Y 1 A ASN 93 ? CG ? A ASN 112 CG 37 1 Y 1 A ASN 93 ? OD1 ? A ASN 112 OD1 38 1 Y 1 A ASN 93 ? ND2 ? A ASN 112 ND2 39 1 Y 1 A LYS 96 ? CG ? A LYS 115 CG 40 1 Y 1 A LYS 96 ? CD ? A LYS 115 CD 41 1 Y 1 A LYS 96 ? CE ? A LYS 115 CE 42 1 Y 1 A LYS 96 ? NZ ? A LYS 115 NZ 43 1 Y 1 A MET 99 ? CG ? A MET 118 CG 44 1 Y 1 A MET 99 ? SD ? A MET 118 SD 45 1 Y 1 A MET 99 ? CE ? A MET 118 CE 46 1 Y 1 A GLU 108 ? CG ? A GLU 127 CG 47 1 Y 1 A GLU 108 ? CD ? A GLU 127 CD 48 1 Y 1 A GLU 108 ? OE1 ? A GLU 127 OE1 49 1 Y 1 A GLU 108 ? OE2 ? A GLU 127 OE2 50 1 Y 1 A GLN 109 ? CG ? A GLN 128 CG 51 1 Y 1 A GLN 109 ? CD ? A GLN 128 CD 52 1 Y 1 A GLN 109 ? OE1 ? A GLN 128 OE1 53 1 Y 1 A GLN 109 ? NE2 ? A GLN 128 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -18 ? A GLY 1 2 1 Y 1 A SER -17 ? A SER 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A HIS -15 ? A HIS 4 5 1 Y 1 A HIS -14 ? A HIS 5 6 1 Y 1 A HIS -13 ? A HIS 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A SER -9 ? A SER 10 11 1 Y 1 A SER -8 ? A SER 11 12 1 Y 1 A SER 54 ? A SER 73 13 1 Y 1 A LYS 55 ? A LYS 74 14 1 Y 1 A GLY 56 ? A GLY 75 15 1 Y 1 A LYS 57 ? A LYS 76 16 1 Y 1 A GLY 58 ? A GLY 77 17 1 Y 1 A LYS 59 ? A LYS 78 18 1 Y 1 A ARG 60 ? A ARG 79 19 1 Y 1 B ALA 2 ? B ALA 1 20 1 Y 1 B HIS 127 ? B HIS 126 21 1 Y 1 B HIS 128 ? B HIS 127 22 1 Y 1 B HIS 129 ? B HIS 128 23 1 Y 1 B HIS 130 ? B HIS 129 24 1 Y 1 B HIS 131 ? B HIS 130 25 1 Y 1 B HIS 132 ? B HIS 131 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'SULFATE ION' SO4 5 water HOH #