HEADER TRANSPORT PROTEIN 08-DEC-16 5MM3 TITLE UNSTRUCTURED MAMC MAGNETITE-BINDING PROTEIN LOCATED BETWEEN TWO TITLE 2 HELICES. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN,MAGNETOSOME COMPND 3 PROTEIN MAMC,SUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI, MAGNETOSPIRILLUM SP. XM- SOURCE 3 1; SOURCE 4 ORGANISM_TAXID: 2209, 1663591; SOURCE 5 GENE: MALE, DU73_08550, MAMC, XM1_2330; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MAGNETOSOM, MAGNETOTACTIC BACTERIA, MAMC, MAGNETITE, KEYWDS 2 BIOMINERALIZATION, PROTEIN-MINERAL INTERACTION, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.NUDELMAN,R.ZARIVACH REVDAT 5 17-JAN-24 5MM3 1 HETSYN REVDAT 4 29-JUL-20 5MM3 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 FORMUL LINK SITE ATOM REVDAT 3 07-FEB-18 5MM3 1 JRNL REVDAT 2 03-JAN-18 5MM3 1 JRNL REVDAT 1 25-OCT-17 5MM3 0 JRNL AUTH H.NUDELMAN,T.PEREZ GONZALEZ,S.KOLUSHIVA,M.WIDDRAT,V.REICHEL, JRNL AUTH 2 A.PEIGNEUX,G.DAVIDOV,R.BITTON,D.FAIVRE,C.JIMENEZ-LOPEZ, JRNL AUTH 3 R.ZARIVACH JRNL TITL THE IMPORTANCE OF THE HELICAL STRUCTURE OF A MAMC-DERIVED JRNL TITL 2 MAGNETITE-INTERACTING PEPTIDE FOR ITS FUNCTION IN MAGNETITE JRNL TITL 3 FORMATION. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 74 10 2018 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 29372895 JRNL DOI 10.1107/S2059798317017491 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.6 REMARK 3 NUMBER OF REFLECTIONS : 36623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1920 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2800 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5617 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.03000 REMARK 3 B22 (A**2) : 2.03000 REMARK 3 B33 (A**2) : -4.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.284 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.177 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5819 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 5536 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7906 ; 1.418 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12833 ; 1.262 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 725 ; 5.825 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 250 ;34.644 ;25.920 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 975 ;14.047 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.016 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 867 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6552 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1226 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2897 ; 2.402 ; 1.636 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2896 ; 2.401 ; 1.636 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3620 ; 3.230 ; 2.440 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3621 ; 3.230 ; 2.441 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2922 ; 4.039 ; 2.073 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2922 ; 4.038 ; 2.073 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4286 ; 5.822 ; 2.914 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6825 ; 7.347 ;14.147 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6739 ; 7.356 ;13.959 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 351 B 1 351 42356 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 371 REMARK 3 ORIGIN FOR THE GROUP (A): 2.7520 35.2430 13.3470 REMARK 3 T TENSOR REMARK 3 T11: 0.0116 T22: 0.0743 REMARK 3 T33: 0.0905 T12: -0.0158 REMARK 3 T13: 0.0047 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.8582 L22: 1.3801 REMARK 3 L33: 0.8532 L12: 0.0873 REMARK 3 L13: -0.0260 L23: 0.5250 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: -0.0299 S13: 0.0003 REMARK 3 S21: 0.0765 S22: -0.0389 S23: 0.0234 REMARK 3 S31: 0.0214 S32: -0.1105 S33: 0.0158 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 352 REMARK 3 ORIGIN FOR THE GROUP (A): 39.3790 26.8810 24.2670 REMARK 3 T TENSOR REMARK 3 T11: 0.0487 T22: 0.1192 REMARK 3 T33: 0.1631 T12: 0.0123 REMARK 3 T13: -0.0151 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 1.0755 L22: 0.9840 REMARK 3 L33: 1.3869 L12: 0.3882 REMARK 3 L13: 0.2667 L23: -0.1921 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: -0.1578 S13: 0.0170 REMARK 3 S21: 0.1493 S22: 0.0598 S23: -0.1225 REMARK 3 S31: -0.0693 S32: 0.0665 S33: -0.0723 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.30 REMARK 3 ION PROBE RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5MM3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1200002658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38573 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 82.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.6 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 87.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5E7U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M TRI-SODIUM CITRATE AND 0.1 M REMARK 280 HEPES, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.58550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.64250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.64250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.29275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.64250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.64250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.87825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.64250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.64250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.29275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.64250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.64250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.87825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.58550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 688 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 602 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLU A 372 REMARK 465 THR A 373 REMARK 465 VAL A 374 REMARK 465 GLY A 375 REMARK 465 GLN A 376 REMARK 465 THR A 377 REMARK 465 VAL A 378 REMARK 465 ASP A 379 REMARK 465 GLU A 380 REMARK 465 ALA A 381 REMARK 465 LEU A 382 REMARK 465 LYS A 383 REMARK 465 ASP A 384 REMARK 465 ALA A 385 REMARK 465 GLN A 386 REMARK 465 THR A 387 REMARK 465 ASN A 388 REMARK 465 SER A 389 REMARK 465 SER A 390 REMARK 465 SER A 391 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 GLY B 353 REMARK 465 ARG B 354 REMARK 465 LEU B 355 REMARK 465 LYS B 356 REMARK 465 GLU B 357 REMARK 465 LYS B 358 REMARK 465 ARG B 359 REMARK 465 ILE B 360 REMARK 465 THR B 361 REMARK 465 ASN B 362 REMARK 465 THR B 363 REMARK 465 GLU B 364 REMARK 465 ALA B 365 REMARK 465 ALA B 366 REMARK 465 ILE B 367 REMARK 465 ASP B 368 REMARK 465 THR B 369 REMARK 465 GLY B 370 REMARK 465 LYS B 371 REMARK 465 GLU B 372 REMARK 465 THR B 373 REMARK 465 VAL B 374 REMARK 465 GLY B 375 REMARK 465 GLN B 376 REMARK 465 THR B 377 REMARK 465 VAL B 378 REMARK 465 ASP B 379 REMARK 465 GLU B 380 REMARK 465 ALA B 381 REMARK 465 LEU B 382 REMARK 465 LYS B 383 REMARK 465 ASP B 384 REMARK 465 ALA B 385 REMARK 465 GLN B 386 REMARK 465 THR B 387 REMARK 465 ASN B 388 REMARK 465 SER B 389 REMARK 465 SER B 390 REMARK 465 SER B 391 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 352 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 168 -79.75 -81.27 REMARK 500 TYR A 283 -56.59 -122.22 REMARK 500 ALA B 168 -82.31 -80.31 REMARK 500 TYR B 283 -55.33 -122.02 REMARK 500 REMARK 500 REMARK: NULL DBREF1 5MM3 A 0 354 UNP A0A0F8QGU4_METMZ DBREF2 5MM3 A A0A0F8QGU4 1 355 DBREF1 5MM3 A 355 375 UNP A0A0U5I168_9PROT DBREF2 5MM3 A A0A0U5I168 58 78 DBREF1 5MM3 A 376 391 UNP A0A0F8QGU4_METMZ DBREF2 5MM3 A A0A0F8QGU4 356 371 DBREF1 5MM3 B 0 354 UNP A0A0F8QGU4_METMZ DBREF2 5MM3 B A0A0F8QGU4 1 355 DBREF1 5MM3 B 355 375 UNP A0A0U5I168_9PROT DBREF2 5MM3 B A0A0U5I168 58 78 DBREF1 5MM3 B 376 391 UNP A0A0F8QGU4_METMZ DBREF2 5MM3 B A0A0F8QGU4 356 371 SEQADV 5MM3 MET A -20 UNP A0A0F8QGU INITIATING METHIONINE SEQADV 5MM3 GLY A -19 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER A -18 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER A -17 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -16 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -15 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -14 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -13 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -12 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -11 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER A -10 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER A -9 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 GLY A -8 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 LEU A -7 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 VAL A -6 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 PRO A -5 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 ARG A -4 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 GLY A -3 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER A -2 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS A -1 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 ILE A 2 UNP A0A0F8QGU THR 3 CLONING ARTIFACT SEQADV 5MM3 MET B -20 UNP A0A0F8QGU INITIATING METHIONINE SEQADV 5MM3 GLY B -19 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER B -18 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER B -17 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -16 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -15 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -14 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -13 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -12 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -11 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER B -10 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER B -9 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 GLY B -8 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 LEU B -7 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 VAL B -6 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 PRO B -5 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 ARG B -4 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 GLY B -3 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 SER B -2 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 HIS B -1 UNP A0A0F8QGU EXPRESSION TAG SEQADV 5MM3 ILE B 2 UNP A0A0F8QGU THR 3 CLONING ARTIFACT SEQRES 1 A 412 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 412 LEU VAL PRO ARG GLY SER HIS MET LYS ILE GLU GLU GLY SEQRES 3 A 412 LYS LEU VAL ILE TRP ILE ASN GLY ASP LYS GLY TYR ASN SEQRES 4 A 412 GLY LEU ALA GLU VAL GLY LYS LYS PHE GLU LYS ASP THR SEQRES 5 A 412 GLY ILE LYS VAL THR VAL GLU HIS PRO ASP LYS LEU GLU SEQRES 6 A 412 GLU LYS PHE PRO GLN VAL ALA ALA THR GLY ASP GLY PRO SEQRES 7 A 412 ASP ILE ILE PHE TRP ALA HIS ASP ARG PHE GLY GLY TYR SEQRES 8 A 412 ALA GLN SER GLY LEU LEU ALA GLU ILE THR PRO ASP LYS SEQRES 9 A 412 ALA PHE GLN ASP LYS LEU TYR PRO PHE THR TRP ASP ALA SEQRES 10 A 412 VAL ARG TYR ASN GLY LYS LEU ILE ALA TYR PRO ILE ALA SEQRES 11 A 412 VAL GLU ALA LEU SER LEU ILE TYR ASN LYS ASP LEU LEU SEQRES 12 A 412 PRO ASN PRO PRO LYS THR TRP GLU GLU ILE PRO ALA LEU SEQRES 13 A 412 ASP LYS GLU LEU LYS ALA LYS GLY LYS SER ALA LEU MET SEQRES 14 A 412 PHE ASN LEU GLN GLU PRO TYR PHE THR TRP PRO LEU ILE SEQRES 15 A 412 ALA ALA ASP GLY GLY TYR ALA PHE LYS TYR GLU ASN GLY SEQRES 16 A 412 LYS TYR ASP ILE LYS ASP VAL GLY VAL ASP ASN ALA GLY SEQRES 17 A 412 ALA LYS ALA GLY LEU THR PHE LEU VAL ASP LEU ILE LYS SEQRES 18 A 412 ASN LYS HIS MET ASN ALA ASP THR ASP TYR SER ILE ALA SEQRES 19 A 412 GLU ALA ALA PHE ASN LYS GLY GLU THR ALA MET THR ILE SEQRES 20 A 412 ASN GLY PRO TRP ALA TRP SER ASN ILE ASP THR SER LYS SEQRES 21 A 412 VAL ASN TYR GLY VAL THR VAL LEU PRO THR PHE LYS GLY SEQRES 22 A 412 GLN PRO SER LYS PRO PHE VAL GLY VAL LEU SER ALA GLY SEQRES 23 A 412 ILE ASN ALA ALA SER PRO ASN LYS GLU LEU ALA LYS GLU SEQRES 24 A 412 PHE LEU GLU ASN TYR LEU LEU THR ASP GLU GLY LEU GLU SEQRES 25 A 412 ALA VAL ASN LYS ASP LYS PRO LEU GLY ALA VAL ALA LEU SEQRES 26 A 412 LYS SER TYR GLU GLU GLU LEU ALA LYS ASP PRO ARG ILE SEQRES 27 A 412 ALA ALA THR MET GLU ASN ALA GLN LYS GLY GLU ILE MET SEQRES 28 A 412 PRO ASN ILE PRO GLN MET SER ALA PHE TRP TYR ALA VAL SEQRES 29 A 412 ARG THR ALA VAL ILE ASN ALA ALA SER GLY ARG LEU LYS SEQRES 30 A 412 GLU LYS ARG ILE THR ASN THR GLU ALA ALA ILE ASP THR SEQRES 31 A 412 GLY LYS GLU THR VAL GLY GLN THR VAL ASP GLU ALA LEU SEQRES 32 A 412 LYS ASP ALA GLN THR ASN SER SER SER SEQRES 1 B 412 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 412 LEU VAL PRO ARG GLY SER HIS MET LYS ILE GLU GLU GLY SEQRES 3 B 412 LYS LEU VAL ILE TRP ILE ASN GLY ASP LYS GLY TYR ASN SEQRES 4 B 412 GLY LEU ALA GLU VAL GLY LYS LYS PHE GLU LYS ASP THR SEQRES 5 B 412 GLY ILE LYS VAL THR VAL GLU HIS PRO ASP LYS LEU GLU SEQRES 6 B 412 GLU LYS PHE PRO GLN VAL ALA ALA THR GLY ASP GLY PRO SEQRES 7 B 412 ASP ILE ILE PHE TRP ALA HIS ASP ARG PHE GLY GLY TYR SEQRES 8 B 412 ALA GLN SER GLY LEU LEU ALA GLU ILE THR PRO ASP LYS SEQRES 9 B 412 ALA PHE GLN ASP LYS LEU TYR PRO PHE THR TRP ASP ALA SEQRES 10 B 412 VAL ARG TYR ASN GLY LYS LEU ILE ALA TYR PRO ILE ALA SEQRES 11 B 412 VAL GLU ALA LEU SER LEU ILE TYR ASN LYS ASP LEU LEU SEQRES 12 B 412 PRO ASN PRO PRO LYS THR TRP GLU GLU ILE PRO ALA LEU SEQRES 13 B 412 ASP LYS GLU LEU LYS ALA LYS GLY LYS SER ALA LEU MET SEQRES 14 B 412 PHE ASN LEU GLN GLU PRO TYR PHE THR TRP PRO LEU ILE SEQRES 15 B 412 ALA ALA ASP GLY GLY TYR ALA PHE LYS TYR GLU ASN GLY SEQRES 16 B 412 LYS TYR ASP ILE LYS ASP VAL GLY VAL ASP ASN ALA GLY SEQRES 17 B 412 ALA LYS ALA GLY LEU THR PHE LEU VAL ASP LEU ILE LYS SEQRES 18 B 412 ASN LYS HIS MET ASN ALA ASP THR ASP TYR SER ILE ALA SEQRES 19 B 412 GLU ALA ALA PHE ASN LYS GLY GLU THR ALA MET THR ILE SEQRES 20 B 412 ASN GLY PRO TRP ALA TRP SER ASN ILE ASP THR SER LYS SEQRES 21 B 412 VAL ASN TYR GLY VAL THR VAL LEU PRO THR PHE LYS GLY SEQRES 22 B 412 GLN PRO SER LYS PRO PHE VAL GLY VAL LEU SER ALA GLY SEQRES 23 B 412 ILE ASN ALA ALA SER PRO ASN LYS GLU LEU ALA LYS GLU SEQRES 24 B 412 PHE LEU GLU ASN TYR LEU LEU THR ASP GLU GLY LEU GLU SEQRES 25 B 412 ALA VAL ASN LYS ASP LYS PRO LEU GLY ALA VAL ALA LEU SEQRES 26 B 412 LYS SER TYR GLU GLU GLU LEU ALA LYS ASP PRO ARG ILE SEQRES 27 B 412 ALA ALA THR MET GLU ASN ALA GLN LYS GLY GLU ILE MET SEQRES 28 B 412 PRO ASN ILE PRO GLN MET SER ALA PHE TRP TYR ALA VAL SEQRES 29 B 412 ARG THR ALA VAL ILE ASN ALA ALA SER GLY ARG LEU LYS SEQRES 30 B 412 GLU LYS ARG ILE THR ASN THR GLU ALA ALA ILE ASP THR SEQRES 31 B 412 GLY LYS GLU THR VAL GLY GLN THR VAL ASP GLU ALA LEU SEQRES 32 B 412 LYS ASP ALA GLN THR ASN SER SER SER HET GLC C 1 12 HET GLC C 2 11 HET GLC D 1 12 HET GLC D 2 11 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 3 GLC 4(C6 H12 O6) FORMUL 5 HOH *293(H2 O) HELIX 1 AA1 GLY A 16 GLY A 32 1 17 HELIX 2 AA2 LYS A 42 ALA A 52 1 11 HELIX 3 AA3 ARG A 66 SER A 73 1 8 HELIX 4 AA4 ASP A 82 ASP A 87 1 6 HELIX 5 AA5 TYR A 90 VAL A 97 1 8 HELIX 6 AA6 GLU A 131 ALA A 141 1 11 HELIX 7 AA7 GLU A 153 ASP A 164 1 12 HELIX 8 AA8 ASN A 185 ASN A 201 1 17 HELIX 9 AA9 ASP A 209 LYS A 219 1 11 HELIX 10 AB1 GLY A 228 TRP A 230 5 3 HELIX 11 AB2 ALA A 231 LYS A 239 1 9 HELIX 12 AB3 ASN A 272 TYR A 283 1 12 HELIX 13 AB4 THR A 286 LYS A 297 1 12 HELIX 14 AB5 LEU A 304 ALA A 312 1 9 HELIX 15 AB6 ASP A 314 GLY A 327 1 14 HELIX 16 AB7 GLN A 335 SER A 352 1 18 HELIX 17 AB8 ARG A 354 LYS A 358 5 5 HELIX 18 AB9 GLY B 16 GLY B 32 1 17 HELIX 19 AC1 LYS B 42 ALA B 52 1 11 HELIX 20 AC2 ARG B 66 SER B 73 1 8 HELIX 21 AC3 ASP B 82 ASP B 87 1 6 HELIX 22 AC4 TYR B 90 VAL B 97 1 8 HELIX 23 AC5 GLU B 131 ALA B 141 1 11 HELIX 24 AC6 THR B 157 ASP B 164 1 8 HELIX 25 AC7 ASN B 185 ASN B 201 1 17 HELIX 26 AC8 ASP B 209 LYS B 219 1 11 HELIX 27 AC9 GLY B 228 TRP B 230 5 3 HELIX 28 AD1 ALA B 231 LYS B 239 1 9 HELIX 29 AD2 ASN B 272 TYR B 283 1 12 HELIX 30 AD3 THR B 286 LYS B 297 1 12 HELIX 31 AD4 LEU B 304 ALA B 312 1 9 HELIX 32 AD5 ASP B 314 GLY B 327 1 14 HELIX 33 AD6 GLN B 335 SER B 352 1 18 SHEET 1 AA1 6 VAL A 35 GLU A 38 0 SHEET 2 AA1 6 LEU A 7 TRP A 10 1 N ILE A 9 O GLU A 38 SHEET 3 AA1 6 ILE A 59 ALA A 63 1 O ILE A 59 N TRP A 10 SHEET 4 AA1 6 PHE A 258 ILE A 266 -1 O SER A 263 N TRP A 62 SHEET 5 AA1 6 TYR A 106 GLU A 111 -1 N GLU A 111 O GLY A 260 SHEET 6 AA1 6 ALA A 301 VAL A 302 -1 O ALA A 301 N VAL A 110 SHEET 1 AA2 5 VAL A 35 GLU A 38 0 SHEET 2 AA2 5 LEU A 7 TRP A 10 1 N ILE A 9 O GLU A 38 SHEET 3 AA2 5 ILE A 59 ALA A 63 1 O ILE A 59 N TRP A 10 SHEET 4 AA2 5 PHE A 258 ILE A 266 -1 O SER A 263 N TRP A 62 SHEET 5 AA2 5 GLU A 328 ILE A 329 1 O GLU A 328 N VAL A 259 SHEET 1 AA3 2 ARG A 98 TYR A 99 0 SHEET 2 AA3 2 LYS A 102 LEU A 103 -1 O LYS A 102 N TYR A 99 SHEET 1 AA4 4 SER A 145 LEU A 147 0 SHEET 2 AA4 4 THR A 222 ASN A 227 1 O ALA A 223 N SER A 145 SHEET 3 AA4 4 SER A 114 ASN A 118 -1 N ILE A 116 O THR A 225 SHEET 4 AA4 4 TYR A 242 THR A 245 -1 O THR A 245 N LEU A 115 SHEET 1 AA5 2 TYR A 167 GLU A 172 0 SHEET 2 AA5 2 LYS A 175 GLY A 182 -1 O ASP A 177 N LYS A 170 SHEET 1 AA6 6 VAL B 35 GLU B 38 0 SHEET 2 AA6 6 LEU B 7 TRP B 10 1 N ILE B 9 O GLU B 38 SHEET 3 AA6 6 ILE B 59 ALA B 63 1 O ILE B 59 N TRP B 10 SHEET 4 AA6 6 PHE B 258 ILE B 266 -1 O SER B 263 N TRP B 62 SHEET 5 AA6 6 TYR B 106 GLU B 111 -1 N GLU B 111 O GLY B 260 SHEET 6 AA6 6 ALA B 301 VAL B 302 -1 O ALA B 301 N VAL B 110 SHEET 1 AA7 5 VAL B 35 GLU B 38 0 SHEET 2 AA7 5 LEU B 7 TRP B 10 1 N ILE B 9 O GLU B 38 SHEET 3 AA7 5 ILE B 59 ALA B 63 1 O ILE B 59 N TRP B 10 SHEET 4 AA7 5 PHE B 258 ILE B 266 -1 O SER B 263 N TRP B 62 SHEET 5 AA7 5 GLU B 328 ILE B 329 1 O GLU B 328 N VAL B 259 SHEET 1 AA8 2 ARG B 98 TYR B 99 0 SHEET 2 AA8 2 LYS B 102 LEU B 103 -1 O LYS B 102 N TYR B 99 SHEET 1 AA9 4 SER B 145 LEU B 147 0 SHEET 2 AA9 4 THR B 222 ASN B 227 1 O ALA B 223 N SER B 145 SHEET 3 AA9 4 SER B 114 ASN B 118 -1 N ILE B 116 O THR B 225 SHEET 4 AA9 4 TYR B 242 THR B 245 -1 O THR B 245 N LEU B 115 SHEET 1 AB1 2 TYR B 167 GLU B 172 0 SHEET 2 AB1 2 LYS B 175 GLY B 182 -1 O ASP B 177 N LYS B 170 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.44 LINK O4 GLC D 1 C1 GLC D 2 1555 1555 1.43 CISPEP 1 GLY A 370 LYS A 371 0 -0.66 CRYST1 115.285 115.285 117.171 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008674 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008535 0.00000