HEADER SPLICING 16-DEC-16 5MPL TITLE HNRNP A1 RRM2 IN COMPLEX WITH 5'-UCAGUU-3' RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HNRNP A1,HELIX-DESTABILIZING PROTEIN,SINGLE-STRAND RNA- COMPND 5 BINDING PROTEIN,HNRNP CORE PROTEIN A1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA UCAGUU; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HNRNPA1, HNRPA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS RRM, SPLICING, RNA, HNRNP EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.BARRAUD,F.H.-T.ALLAIN REVDAT 3 14-JUN-23 5MPL 1 REMARK REVDAT 2 08-MAY-19 5MPL 1 REMARK REVDAT 1 05-JUL-17 5MPL 0 JRNL AUTH I.BEUSCH,P.BARRAUD,A.MOURSY,A.CLERY,F.H.ALLAIN JRNL TITL TANDEM HNRNP A1 RNA RECOGNITION MOTIFS ACT IN CONCERT TO JRNL TITL 2 REPRESS THE SPLICING OF SURVIVAL MOTOR NEURON EXON 7. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28650318 JRNL DOI 10.7554/ELIFE.25736 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1200002807. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 10 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-99% 15N] HNRNP A1 REMARK 210 RRM2, 1.0 G/L RNA UCAGUU, 90% REMARK 210 H2O/10% D2O; 1.0 MM [U-99% 13C; REMARK 210 U-99% 15N] HNRNP A1 RRM2, 1.0 MM REMARK 210 RNA UCAGUU, 90% H2O/10% D2O; 1.0 REMARK 210 MM [U-99% 15N] HNRNP A1 RRM2, REMARK 210 1.0 MM RNA UCAGUU, 100% D2O; 1.0 REMARK 210 MM [U-99% 13C; U-99% 15N] HNRNP REMARK 210 A1 RRM2, 1.0 MM RNA UCAGUU, 100% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D HCC(CO) REMARK 210 NH TOCSY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; 2D 1H-1H NOESY; REMARK 210 2D 1H-1H TOCSY; 2D F1FF2F 13C- REMARK 210 FILTERED NOESY; 3D F1EF3F 13C- REMARK 210 FILTERED/EDITED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 700 MHZ; 750 REMARK 210 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, SPARKY, CYANA, PROCHECK REMARK 210 / PROCHECK-NMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 15 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H3' U B 1 H5'' C B 2 0.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 97 95.26 61.72 REMARK 500 1 PRO A 98 102.37 -58.81 REMARK 500 1 ASP A 115 90.22 -68.61 REMARK 500 1 GLU A 117 -168.86 -125.79 REMARK 500 1 GLU A 132 -71.20 -89.12 REMARK 500 1 LYS A 166 -71.39 -87.04 REMARK 500 1 ASN A 171 -12.84 70.57 REMARK 500 2 PRO A 98 37.49 -84.34 REMARK 500 2 GLU A 132 -73.03 -84.20 REMARK 500 2 LYS A 145 108.93 -59.97 REMARK 500 3 GLU A 132 -76.65 -81.37 REMARK 500 3 LYS A 166 -71.67 -92.17 REMARK 500 3 SER A 192 -63.34 -97.19 REMARK 500 4 ARG A 97 78.85 -113.61 REMARK 500 4 LYS A 113 -154.72 -119.62 REMARK 500 4 GLU A 132 -71.19 -85.90 REMARK 500 4 MET A 137 70.41 54.87 REMARK 500 4 LYS A 166 -69.37 -127.42 REMARK 500 5 PRO A 98 -81.54 -87.70 REMARK 500 5 GLU A 132 -70.44 -81.35 REMARK 500 5 MET A 137 70.78 61.00 REMARK 500 5 LYS A 166 -61.21 -93.83 REMARK 500 5 ASN A 171 -15.48 74.14 REMARK 500 6 PRO A 98 97.81 -57.46 REMARK 500 6 ASP A 115 98.41 66.63 REMARK 500 6 GLU A 132 -75.63 -85.89 REMARK 500 6 ASN A 171 -7.19 71.43 REMARK 500 6 ARG A 194 29.64 -151.36 REMARK 500 7 GLN A 96 4.81 56.66 REMARK 500 7 GLU A 132 -74.68 -86.66 REMARK 500 7 LYS A 145 123.08 68.56 REMARK 500 7 LYS A 166 -64.25 -91.85 REMARK 500 8 GLU A 117 -168.50 -127.72 REMARK 500 8 GLU A 132 -70.57 -85.35 REMARK 500 9 ARG A 97 107.49 68.75 REMARK 500 9 GLU A 117 -163.61 -121.15 REMARK 500 9 GLU A 132 -70.01 -78.03 REMARK 500 9 LYS A 144 -76.79 -93.25 REMARK 500 9 LYS A 166 -64.27 -93.64 REMARK 500 9 SER A 191 25.99 -152.56 REMARK 500 10 LYS A 113 -67.33 -140.08 REMARK 500 10 GLU A 132 -72.28 -78.01 REMARK 500 10 MET A 137 96.99 62.31 REMARK 500 10 LYS A 166 -66.06 -100.63 REMARK 500 10 ASN A 171 -4.62 71.47 REMARK 500 11 GLN A 96 -46.75 71.94 REMARK 500 11 LYS A 113 -48.32 -145.80 REMARK 500 11 GLU A 132 -75.38 -82.59 REMARK 500 11 LYS A 166 -60.09 -91.27 REMARK 500 12 ILE A 112 91.06 -68.20 REMARK 500 REMARK 500 THIS ENTRY HAS 91 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5MPG RELATED DB: PDB REMARK 900 HNRNP A1 RRM1 IN COMPLEX WITH RNA 5'-UUAGGUC-3' REMARK 900 RELATED ID: 34080 RELATED DB: BMRB REMARK 900 HNRNP A1 RRM2 IN COMPLEX WITH 5'-UCAGUU-3' RNA DBREF 5MPL A 95 196 UNP P09651 ROA1_HUMAN 95 196 DBREF 5MPL B 1 6 PDB 5MPL 5MPL 1 6 SEQRES 1 A 102 SER GLN ARG PRO GLY ALA HIS LEU THR VAL LYS LYS ILE SEQRES 2 A 102 PHE VAL GLY GLY ILE LYS GLU ASP THR GLU GLU HIS HIS SEQRES 3 A 102 LEU ARG ASP TYR PHE GLU GLN TYR GLY LYS ILE GLU VAL SEQRES 4 A 102 ILE GLU ILE MET THR ASP ARG GLY SER GLY LYS LYS ARG SEQRES 5 A 102 GLY PHE ALA PHE VAL THR PHE ASP ASP HIS ASP SER VAL SEQRES 6 A 102 ASP LYS ILE VAL ILE GLN LYS TYR HIS THR VAL ASN GLY SEQRES 7 A 102 HIS ASN CYS GLU VAL ARG LYS ALA LEU SER LYS GLN GLU SEQRES 8 A 102 MET ALA SER ALA SER SER SER GLN ARG GLY ARG SEQRES 1 B 6 U C A G U U HELIX 1 AA1 GLU A 117 GLU A 126 1 10 HELIX 2 AA2 VAL A 159 ILE A 164 1 6 HELIX 3 AA3 SER A 182 SER A 192 1 11 SHEET 1 AA1 5 ILE A 131 GLU A 135 0 SHEET 2 AA1 5 ALA A 149 PHE A 153 -1 O PHE A 150 N GLU A 135 SHEET 3 AA1 5 LYS A 106 GLY A 110 -1 N VAL A 109 O ALA A 149 SHEET 4 AA1 5 HIS A 173 LYS A 179 -1 O ARG A 178 N PHE A 108 SHEET 5 AA1 5 TYR A 167 VAL A 170 -1 N HIS A 168 O CYS A 175 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1