HEADER CELL ADHESION 21-DEC-16 5MR2 TITLE CRYSTAL STRUCTURE OF RED ABALONE VERL REPEAT 2 WITH LINKER AT 2.5 A TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: VITELLINE ENVELOPE SPERM LYSIN RECEPTOR; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 176-298; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALIOTIS RUFESCENS; SOURCE 3 ORGANISM_COMMON: CALIFORNIA RED ABALONE; SOURCE 4 ORGANISM_TAXID: 6454; SOURCE 5 GENE: VERL; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK-293S; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS CELL ADHESION, FERTILIZATION, EGG-SPERM INTERACTION, GAMETE KEYWDS 2 RECOGNITION, VITELLINE ENVELOPE, SPERM RECEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR H.SADAT AL-HOSSEINI,I.RAJ,K.NISHIMURA,D.DE SANCTIS,L.JOVINE REVDAT 5 17-JAN-24 5MR2 1 HETSYN REVDAT 4 29-JUL-20 5MR2 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 06-SEP-17 5MR2 1 REMARK REVDAT 2 28-JUN-17 5MR2 1 JRNL REVDAT 1 14-JUN-17 5MR2 0 JRNL AUTH I.RAJ,H.SADAT AL HOSSEINI,E.DIOGUARDI,K.NISHIMURA,L.HAN, JRNL AUTH 2 A.VILLA,D.DE SANCTIS,L.JOVINE JRNL TITL STRUCTURAL BASIS OF EGG COAT-SPERM RECOGNITION AT JRNL TITL 2 FERTILIZATION. JRNL REF CELL V. 169 1315 2017 JRNL REFN ISSN 1097-4172 JRNL PMID 28622512 JRNL DOI 10.1016/J.CELL.2017.05.033 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.J.SWANSON,J.E.AAGAARD,V.D.VACQUIER,M.MONNE, REMARK 1 AUTH 2 H.SADAT AL HOSSEINI,L.JOVINE REMARK 1 TITL THE MOLECULAR BASIS OF SEX: LINKING YEAST TO HUMAN. REMARK 1 REF MOL. BIOL. EVOL. V. 28 1963 2011 REMARK 1 REFN ESSN 1537-1719 REMARK 1 PMID 21282709 REMARK 1 DOI 10.1093/MOLBEV/MSR026 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.E.AAGAARD,X.YI,M.J.MACCOSS,W.J.SWANSON REMARK 1 TITL RAPIDLY EVOLVING ZONA PELLUCIDA DOMAIN PROTEINS ARE A MAJOR REMARK 1 TITL 2 COMPONENT OF THE VITELLINE ENVELOPE OF ABALONE EGGS. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 103 17302 2006 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 17085584 REMARK 1 REFERENCE 3 REMARK 1 AUTH B.E.GALINDO,G.W.MOY,W.J.SWANSON,V.D.VACQUIER REMARK 1 TITL FULL-LENGTH SEQUENCE OF VERL, THE EGG VITELLINE ENVELOPE REMARK 1 TITL 2 RECEPTOR FOR ABALONE SPERM LYSIN. REMARK 1 REF GENE V. 288 111 2002 REMARK 1 REFN ISSN 0378-1119 REMARK 1 PMID 12034500 REMARK 1 REFERENCE 4 REMARK 1 AUTH W.J.SWANSON,V.D.VACQUIER REMARK 1 TITL THE ABALONE EGG VITELLINE ENVELOPE RECEPTOR FOR SPERM LYSIN REMARK 1 TITL 2 IS A GIANT MULTIVALENT MOLECULE. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 94 6724 1997 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 9192632 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 14993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1503 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0139 - 5.5572 1.00 1272 142 0.2212 0.2583 REMARK 3 2 5.5572 - 4.4120 1.00 1226 136 0.1695 0.2207 REMARK 3 3 4.4120 - 3.8546 1.00 1240 138 0.1935 0.2573 REMARK 3 4 3.8546 - 3.5023 1.00 1231 137 0.2304 0.2577 REMARK 3 5 3.5023 - 3.2513 1.00 1229 136 0.2487 0.2813 REMARK 3 6 3.2513 - 3.0597 1.00 1238 138 0.2711 0.3471 REMARK 3 7 3.0597 - 2.9065 1.00 1203 134 0.3079 0.3630 REMARK 3 8 2.9065 - 2.7800 1.00 1232 136 0.3117 0.3600 REMARK 3 9 2.7800 - 2.6729 1.00 1230 137 0.3435 0.3731 REMARK 3 10 2.6729 - 2.5807 1.00 1210 135 0.3642 0.3897 REMARK 3 11 2.5807 - 2.5000 0.97 1179 134 0.3959 0.4132 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2624 REMARK 3 ANGLE : 1.132 3578 REMARK 3 CHIRALITY : 0.072 407 REMARK 3 PLANARITY : 0.007 446 REMARK 3 DIHEDRAL : 13.732 971 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 11.5666 7.9431 -3.9007 REMARK 3 T TENSOR REMARK 3 T11: 0.5851 T22: 0.6345 REMARK 3 T33: 0.6343 T12: -0.0209 REMARK 3 T13: 0.0257 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 2.6503 L22: 4.2846 REMARK 3 L33: 3.0932 L12: -0.0895 REMARK 3 L13: -0.4389 L23: 1.2871 REMARK 3 S TENSOR REMARK 3 S11: 0.0299 S12: 0.2382 S13: 0.0370 REMARK 3 S21: -0.2072 S22: -0.1391 S23: 0.2613 REMARK 3 S31: -0.3496 S32: -0.1949 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 21.7244 -7.5320 -14.7795 REMARK 3 T TENSOR REMARK 3 T11: 0.4731 T22: 0.6208 REMARK 3 T33: 0.7006 T12: -0.0817 REMARK 3 T13: -0.0121 T23: -0.0666 REMARK 3 L TENSOR REMARK 3 L11: 2.8110 L22: 5.5007 REMARK 3 L33: 5.9477 L12: 0.1029 REMARK 3 L13: -0.7059 L23: 0.6811 REMARK 3 S TENSOR REMARK 3 S11: -0.1768 S12: 0.2926 S13: -0.0486 REMARK 3 S21: -0.2630 S22: 0.2008 S23: -0.2194 REMARK 3 S31: -0.2820 S32: 0.1657 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 20.2374 15.8494 30.8180 REMARK 3 T TENSOR REMARK 3 T11: 0.6108 T22: 0.5823 REMARK 3 T33: 0.6502 T12: -0.0263 REMARK 3 T13: -0.0386 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 1.2283 L22: 2.8244 REMARK 3 L33: 5.9675 L12: -0.3748 REMARK 3 L13: 0.2097 L23: -0.5641 REMARK 3 S TENSOR REMARK 3 S11: 0.1902 S12: -0.0016 S13: -0.1275 REMARK 3 S21: -0.1236 S22: 0.0302 S23: -0.0488 REMARK 3 S31: -0.0054 S32: -0.1717 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MR2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1200000737. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8729 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS MAY 1, 2016 BUILT=20160617 REMARK 200 DATA SCALING SOFTWARE : XDS MAY 1, 2016 BUILT=20160617 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15039 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.13820 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 2.38600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 5IIA, 5IIB, 5IIC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM FORMATE PH 6.6, 20% PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.96000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.59500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.96000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.59500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 52.17037 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 79.27729 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 173 REMARK 465 PRO A 199 REMARK 465 LYS A 200 REMARK 465 ASN A 234 REMARK 465 LYS A 235 REMARK 465 SER A 285 REMARK 465 PRO A 286 REMARK 465 ASP A 287 REMARK 465 ALA A 288 REMARK 465 PRO A 289 REMARK 465 LYS A 290 REMARK 465 PRO A 291 REMARK 465 GLU A 292 REMARK 465 ALA A 293 REMARK 465 CYS A 294 REMARK 465 LEU A 295 REMARK 465 ALA A 296 REMARK 465 ALA A 297 REMARK 465 PRO A 298 REMARK 465 LEU A 299 REMARK 465 GLU A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 LYS B 200 REMARK 465 CYS B 201 REMARK 465 LYS B 235 REMARK 465 LEU B 236 REMARK 465 LEU B 237 REMARK 465 ASP B 238 REMARK 465 SER B 285 REMARK 465 PRO B 286 REMARK 465 ASP B 287 REMARK 465 ALA B 288 REMARK 465 PRO B 289 REMARK 465 LYS B 290 REMARK 465 PRO B 291 REMARK 465 GLU B 292 REMARK 465 ALA B 293 REMARK 465 CYS B 294 REMARK 465 LEU B 295 REMARK 465 ALA B 296 REMARK 465 ALA B 297 REMARK 465 PRO B 298 REMARK 465 LEU B 299 REMARK 465 GLU B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 HIS B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 465 GLU C 173 REMARK 465 LYS C 200 REMARK 465 CYS C 201 REMARK 465 LEU C 236 REMARK 465 LEU C 237 REMARK 465 ASP C 238 REMARK 465 SER C 239 REMARK 465 SER C 285 REMARK 465 PRO C 286 REMARK 465 ASP C 287 REMARK 465 ALA C 288 REMARK 465 PRO C 289 REMARK 465 LYS C 290 REMARK 465 PRO C 291 REMARK 465 GLU C 292 REMARK 465 ALA C 293 REMARK 465 CYS C 294 REMARK 465 LEU C 295 REMARK 465 ALA C 296 REMARK 465 ALA C 297 REMARK 465 PRO C 298 REMARK 465 LEU C 299 REMARK 465 GLU C 300 REMARK 465 HIS C 301 REMARK 465 HIS C 302 REMARK 465 HIS C 303 REMARK 465 HIS C 304 REMARK 465 HIS C 305 REMARK 465 HIS C 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 253 OD2 ASP B 179 1.51 REMARK 500 OD1 ASN A 254 H THR A 256 1.54 REMARK 500 HH21 ARG A 233 O HOH A 1001 1.58 REMARK 500 OE1 GLN A 279 HE22 GLN B 279 1.60 REMARK 500 ND2 ASN A 254 O5 NAG A 900 2.02 REMARK 500 O ARG A 233 N LEU A 236 2.15 REMARK 500 ND2 ASN B 254 O5 NAG B 900 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HZ1 LYS B 267 O SER C 269 2655 1.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5II4 RELATED DB: PDB REMARK 900 RELATED ID: 5II5 RELATED DB: PDB REMARK 900 RELATED ID: 5II6 RELATED DB: PDB REMARK 900 RELATED ID: 5IIA RELATED DB: PDB REMARK 900 RELATED ID: 5IIB RELATED DB: PDB REMARK 900 RELATED ID: 3D4C RELATED DB: PDB REMARK 900 RELATED ID: 3D4G RELATED DB: PDB REMARK 900 RELATED ID: 3EF7 RELATED DB: PDB REMARK 900 RELATED ID: 3NK3 RELATED DB: PDB REMARK 900 RELATED ID: 3NK4 RELATED DB: PDB DBREF 5MR2 A 176 298 UNP Q8WR62 Q8WR62_HALRU 176 298 DBREF 5MR2 B 176 298 UNP Q8WR62 Q8WR62_HALRU 176 298 DBREF 5MR2 C 176 298 UNP Q8WR62 Q8WR62_HALRU 176 298 SEQADV 5MR2 GLU A 173 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 THR A 174 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLY A 175 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 ALA A 293 UNP Q8WR62 SER 293 ENGINEERED MUTATION SEQADV 5MR2 ALA A 296 UNP Q8WR62 SER 296 ENGINEERED MUTATION SEQADV 5MR2 ALA A 297 UNP Q8WR62 SER 297 ENGINEERED MUTATION SEQADV 5MR2 LEU A 299 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLU A 300 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS A 301 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS A 302 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS A 303 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS A 304 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS A 305 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS A 306 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLU B 173 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 THR B 174 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLY B 175 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 ALA B 293 UNP Q8WR62 SER 293 ENGINEERED MUTATION SEQADV 5MR2 ALA B 296 UNP Q8WR62 SER 296 ENGINEERED MUTATION SEQADV 5MR2 ALA B 297 UNP Q8WR62 SER 297 ENGINEERED MUTATION SEQADV 5MR2 LEU B 299 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLU B 300 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS B 301 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS B 302 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS B 303 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS B 304 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS B 305 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS B 306 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLU C 173 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 THR C 174 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLY C 175 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 ALA C 293 UNP Q8WR62 SER 293 ENGINEERED MUTATION SEQADV 5MR2 ALA C 296 UNP Q8WR62 SER 296 ENGINEERED MUTATION SEQADV 5MR2 ALA C 297 UNP Q8WR62 SER 297 ENGINEERED MUTATION SEQADV 5MR2 LEU C 299 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 GLU C 300 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS C 301 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS C 302 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS C 303 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS C 304 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS C 305 UNP Q8WR62 EXPRESSION TAG SEQADV 5MR2 HIS C 306 UNP Q8WR62 EXPRESSION TAG SEQRES 1 A 134 GLU THR GLY ILE ASP TRP ASP VAL PHE CYS SER GLN ASN SEQRES 2 A 134 GLU ASN ILE PRO ALA LYS PHE ILE SER ARG LEU VAL ALA SEQRES 3 A 134 PRO LYS CYS LEU ALA VAL GLU LYS MET ASP VAL ASP CYS SEQRES 4 A 134 SER ASN GLY LEU VAL PRO ILE THR HIS GLU HIS GLY PHE SEQRES 5 A 134 ASN MET MET LEU ILE GLN TYR THR ARG ASN LYS LEU LEU SEQRES 6 A 134 ASP SER PRO GLY MET CYS VAL PHE TRP GLY PRO TYR SER SEQRES 7 A 134 VAL PRO LYS ASN ASP THR VAL VAL LEU TYR THR VAL THR SEQRES 8 A 134 ALA ARG LEU LYS TRP SER GLU GLY PRO PRO THR ASP LEU SEQRES 9 A 134 SER ILE GLN CYS TYR MET PRO LYS SER PRO ASP ALA PRO SEQRES 10 A 134 LYS PRO GLU ALA CYS LEU ALA ALA PRO LEU GLU HIS HIS SEQRES 11 A 134 HIS HIS HIS HIS SEQRES 1 B 134 GLU THR GLY ILE ASP TRP ASP VAL PHE CYS SER GLN ASN SEQRES 2 B 134 GLU ASN ILE PRO ALA LYS PHE ILE SER ARG LEU VAL ALA SEQRES 3 B 134 PRO LYS CYS LEU ALA VAL GLU LYS MET ASP VAL ASP CYS SEQRES 4 B 134 SER ASN GLY LEU VAL PRO ILE THR HIS GLU HIS GLY PHE SEQRES 5 B 134 ASN MET MET LEU ILE GLN TYR THR ARG ASN LYS LEU LEU SEQRES 6 B 134 ASP SER PRO GLY MET CYS VAL PHE TRP GLY PRO TYR SER SEQRES 7 B 134 VAL PRO LYS ASN ASP THR VAL VAL LEU TYR THR VAL THR SEQRES 8 B 134 ALA ARG LEU LYS TRP SER GLU GLY PRO PRO THR ASP LEU SEQRES 9 B 134 SER ILE GLN CYS TYR MET PRO LYS SER PRO ASP ALA PRO SEQRES 10 B 134 LYS PRO GLU ALA CYS LEU ALA ALA PRO LEU GLU HIS HIS SEQRES 11 B 134 HIS HIS HIS HIS SEQRES 1 C 134 GLU THR GLY ILE ASP TRP ASP VAL PHE CYS SER GLN ASN SEQRES 2 C 134 GLU ASN ILE PRO ALA LYS PHE ILE SER ARG LEU VAL ALA SEQRES 3 C 134 PRO LYS CYS LEU ALA VAL GLU LYS MET ASP VAL ASP CYS SEQRES 4 C 134 SER ASN GLY LEU VAL PRO ILE THR HIS GLU HIS GLY PHE SEQRES 5 C 134 ASN MET MET LEU ILE GLN TYR THR ARG ASN LYS LEU LEU SEQRES 6 C 134 ASP SER PRO GLY MET CYS VAL PHE TRP GLY PRO TYR SER SEQRES 7 C 134 VAL PRO LYS ASN ASP THR VAL VAL LEU TYR THR VAL THR SEQRES 8 C 134 ALA ARG LEU LYS TRP SER GLU GLY PRO PRO THR ASP LEU SEQRES 9 C 134 SER ILE GLN CYS TYR MET PRO LYS SER PRO ASP ALA PRO SEQRES 10 C 134 LYS PRO GLU ALA CYS LEU ALA ALA PRO LEU GLU HIS HIS SEQRES 11 C 134 HIS HIS HIS HIS HET NAG A 900 28 HET NAG B 900 28 HET NAG C 900 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 7 HOH *22(H2 O) HELIX 1 AA1 HIS B 220 HIS B 222 5 3 SHEET 1 AA1 4 ILE A 176 PHE A 181 0 SHEET 2 AA1 4 ALA A 190 LEU A 196 -1 O ARG A 195 N ASP A 177 SHEET 3 AA1 4 PHE A 224 GLN A 230 -1 O MET A 227 N PHE A 192 SHEET 4 AA1 4 CYS A 243 VAL A 244 1 O CYS A 243 N GLN A 230 SHEET 1 AA2 4 GLY A 214 PRO A 217 0 SHEET 2 AA2 4 VAL A 204 CYS A 211 -1 N VAL A 209 O VAL A 216 SHEET 3 AA2 4 VAL A 257 TRP A 268 -1 O THR A 263 N ASP A 210 SHEET 4 AA2 4 TRP A 246 SER A 250 -1 N TRP A 246 O THR A 261 SHEET 1 AA3 4 GLY A 214 PRO A 217 0 SHEET 2 AA3 4 VAL A 204 CYS A 211 -1 N VAL A 209 O VAL A 216 SHEET 3 AA3 4 VAL A 257 TRP A 268 -1 O THR A 263 N ASP A 210 SHEET 4 AA3 4 THR A 274 PRO A 283 -1 O CYS A 280 N TYR A 260 SHEET 1 AA4 3 ILE B 176 PHE B 181 0 SHEET 2 AA4 3 ALA B 190 LEU B 196 -1 O ARG B 195 N ASP B 177 SHEET 3 AA4 3 PHE B 224 ILE B 229 -1 O ILE B 229 N ALA B 190 SHEET 1 AA5 4 GLY B 214 PRO B 217 0 SHEET 2 AA5 4 VAL B 204 CYS B 211 -1 N VAL B 209 O VAL B 216 SHEET 3 AA5 4 VAL B 257 TRP B 268 -1 O LYS B 267 N LYS B 206 SHEET 4 AA5 4 TRP B 246 SER B 250 -1 N TRP B 246 O THR B 261 SHEET 1 AA6 4 GLY B 214 PRO B 217 0 SHEET 2 AA6 4 VAL B 204 CYS B 211 -1 N VAL B 209 O VAL B 216 SHEET 3 AA6 4 VAL B 257 TRP B 268 -1 O LYS B 267 N LYS B 206 SHEET 4 AA6 4 THR B 274 PRO B 283 -1 O MET B 282 N VAL B 258 SHEET 1 AA7 3 ILE C 176 PHE C 181 0 SHEET 2 AA7 3 ALA C 190 LEU C 196 -1 O ARG C 195 N ASP C 177 SHEET 3 AA7 3 PHE C 224 ILE C 229 -1 O MET C 227 N PHE C 192 SHEET 1 AA8 4 GLY C 214 PRO C 217 0 SHEET 2 AA8 4 VAL C 204 CYS C 211 -1 N VAL C 209 O VAL C 216 SHEET 3 AA8 4 VAL C 257 TRP C 268 -1 O THR C 263 N ASP C 210 SHEET 4 AA8 4 TRP C 246 TYR C 249 -1 N TRP C 246 O THR C 261 SHEET 1 AA9 4 GLY C 214 PRO C 217 0 SHEET 2 AA9 4 VAL C 204 CYS C 211 -1 N VAL C 209 O VAL C 216 SHEET 3 AA9 4 VAL C 257 TRP C 268 -1 O THR C 263 N ASP C 210 SHEET 4 AA9 4 THR C 274 PRO C 283 -1 O CYS C 280 N TYR C 260 SSBOND 1 CYS A 182 CYS A 280 1555 1555 2.04 SSBOND 2 CYS A 211 CYS A 243 1555 1555 2.03 SSBOND 3 CYS B 182 CYS B 280 1555 1555 2.07 SSBOND 4 CYS B 211 CYS B 243 1555 1555 2.04 SSBOND 5 CYS C 182 CYS C 280 1555 1555 2.05 SSBOND 6 CYS C 211 CYS C 243 1555 1555 2.01 LINK ND2 ASN A 254 C1 NAG A 900 1555 1555 1.42 LINK ND2 ASN B 254 C1 NAG B 900 1555 1555 1.44 LINK ND2 ASN C 254 C1 NAG C 900 1555 1555 1.46 CISPEP 1 GLY A 247 PRO A 248 0 3.97 CISPEP 2 GLY B 247 PRO B 248 0 5.12 CISPEP 3 GLY C 247 PRO C 248 0 5.68 CRYST1 69.920 79.190 81.240 90.00 102.62 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014302 0.000000 0.003203 0.00000 SCALE2 0.000000 0.012628 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012614 0.00000