HEADER HYDROLASE 06-JAN-17 5MT2 TITLE GLYCOSIDE HYDROLASE BT_0996 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GALACTOSIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON (STRAIN ATCC 29148 SOURCE 3 / DSM 2079 / NCTC 10582 / E50 / VPI-5482); SOURCE 4 ORGANISM_TAXID: 226186; SOURCE 5 GENE: BT_0996; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSIDE HYDROLASE, ARABINOFURANOSIDASE, PLANT PECTIN, RGII, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BASLE,D.NDEH,A.ROGOWSKI,A.CARTMELL,A.S.LUIS,I.VENDITTO,A.LABOUREL, AUTHOR 2 H.J.GILBERT REVDAT 4 30-AUG-17 5MT2 1 REMARK REVDAT 3 12-APR-17 5MT2 1 JRNL REVDAT 2 05-APR-17 5MT2 1 JRNL REVDAT 1 22-MAR-17 5MT2 0 JRNL AUTH D.NDEH,A.ROGOWSKI,A.CARTMELL,A.S.LUIS,A.BASLE,J.GRAY, JRNL AUTH 2 I.VENDITTO,J.BRIGGS,X.ZHANG,A.LABOUREL,N.TERRAPON, JRNL AUTH 3 F.BUFFETTO,S.NEPOGODIEV,Y.XIAO,R.A.FIELD,Y.ZHU,M.A.O'NEILL, JRNL AUTH 4 B.R.URBANOWICZ,W.S.YORK,G.J.DAVIES,D.W.ABBOTT,M.C.RALET, JRNL AUTH 5 E.C.MARTENS,B.HENRISSAT,H.J.GILBERT JRNL TITL COMPLEX PECTIN METABOLISM BY GUT BACTERIA REVEALS NOVEL JRNL TITL 2 CATALYTIC FUNCTIONS. JRNL REF NATURE V. 544 65 2017 JRNL REFN ISSN 0028-0836 JRNL PMID 28329766 JRNL DOI 10.1038/NATURE21725 REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 54710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.128 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2879 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3900 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 186 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2824 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 345 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : -0.37000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.058 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.221 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2980 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2609 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4063 ; 1.500 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6053 ; 0.950 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 369 ; 7.314 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;31.373 ;23.472 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 432 ;10.754 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.462 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 414 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3371 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 673 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1428 ; 1.156 ; 1.343 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1427 ; 1.141 ; 1.342 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1789 ; 1.400 ; 2.026 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1790 ; 1.404 ; 2.026 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1552 ; 1.661 ; 1.567 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1552 ; 1.649 ; 1.567 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2267 ; 1.907 ; 2.264 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3507 ; 2.870 ;17.157 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3507 ; 2.869 ;17.154 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5589 ; 1.365 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 194 ;21.889 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5647 ; 6.498 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5MT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200002962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57609 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 46.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 98.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 81.70 REMARK 200 R MERGE FOR SHELL (I) : 0.62000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % (W/V) PEG 8000, 0.1 M TRIS PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.28250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ILE A 2 REMARK 465 ASP A 3 REMARK 465 LYS A 4 REMARK 465 SER A 5 REMARK 465 ILE A 6 REMARK 465 MSE A 7 REMARK 465 LYS A 8 REMARK 465 LYS A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 THR A 13 REMARK 465 PHE A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 ILE A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 VAL A 20 REMARK 465 CYS A 21 REMARK 465 SER A 22 REMARK 465 LEU A 23 REMARK 465 TYR A 24 REMARK 465 ALA A 25 REMARK 465 GLN A 26 REMARK 465 ARG A 27 REMARK 465 LYS A 380 REMARK 465 ASN A 381 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 GLU A 32 CD OE1 OE2 REMARK 470 LYS A 195 CD CE NZ REMARK 470 LYS A 202 CE NZ REMARK 470 LYS A 238 CE NZ REMARK 470 LYS A 248 CD CE NZ REMARK 470 LYS A 251 CG CD CE NZ REMARK 470 LYS A 278 CD CE NZ REMARK 470 LYS A 298 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 547 O HOH A 764 2656 1.50 REMARK 500 O1 GOL A 402 O HOH A 843 2646 1.63 REMARK 500 O HOH A 724 O HOH A 827 2656 1.71 REMARK 500 O HOH A 819 O HOH A 827 2656 2.04 REMARK 500 O HOH A 633 O HOH A 684 1455 2.05 REMARK 500 NH1 ARG A 113 O HOH A 843 2646 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 80 49.81 -99.12 REMARK 500 LEU A 100 -11.66 73.94 REMARK 500 LYS A 162 -0.57 77.76 REMARK 500 TYR A 206 -130.04 -119.98 REMARK 500 MSE A 250 -13.35 77.10 REMARK 500 LEU A 309 -5.04 74.45 REMARK 500 SER A 324 -12.41 -155.12 REMARK 500 LYS A 334 136.23 77.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 845 DISTANCE = 7.44 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 DBREF 5MT2 A 2 381 UNP Q8A921 Q8A921_BACTN 2 381 SEQADV 5MT2 MSE A 1 UNP Q8A921 INITIATING METHIONINE SEQRES 1 A 381 MSE ILE ASP LYS SER ILE MSE LYS LYS LEU LEU LEU THR SEQRES 2 A 381 PHE LEU SER ILE ALA ALA VAL CYS SER LEU TYR ALA GLN SEQRES 3 A 381 ARG LYS VAL THR GLN GLU ARG MSE GLU GLN ILE TYR GLU SEQRES 4 A 381 GLU VAL LYS THR PRO TYR LYS TYR GLY LEU ALA VAL ALA SEQRES 5 A 381 PRO THR ASP ASN TYR HIS LYS ILE ASP CYS PRO THR VAL SEQRES 6 A 381 PHE ARG GLN GLY ASP LYS TRP LEU MSE THR TYR VAL VAL SEQRES 7 A 381 TYR ASN GLY LYS THR GLY THR ASP GLY ARG GLY TYR GLU SEQRES 8 A 381 THR TRP ILE ALA GLU SER ASP ASN LEU LEU ASP TRP ARG SEQRES 9 A 381 THR LEU GLY ARG VAL LEU SER TYR ARG ASP GLY LYS TRP SEQRES 10 A 381 ASP CYS ASN GLN ARG GLY GLY PHE PRO ALA LEU PRO ASP SEQRES 11 A 381 MSE GLU TRP GLY GLY SER TYR GLU LEU GLN THR TYR LYS SEQRES 12 A 381 GLY ARG HIS TRP MSE THR TYR ILE GLY GLY GLU GLY THR SEQRES 13 A 381 GLY TYR GLU ALA VAL LYS ALA PRO LEU PHE VAL GLY LEU SEQRES 14 A 381 ALA SER THR LYS GLY ASP ILE SER THR ALA HIS GLU TRP SEQRES 15 A 381 GLU SER LEU ASP LYS PRO ILE LEU SER ILE HIS ASP LYS SEQRES 16 A 381 ASP ALA GLN TRP TRP GLU LYS LEU THR GLN TYR LYS SER SEQRES 17 A 381 THR VAL TYR TRP ASP LYS ASP LYS THR LEU GLY ALA PRO SEQRES 18 A 381 PHE VAL MSE PHE TYR ASN ALA GLY GLY ARG HIS PRO GLU SEQRES 19 A 381 THR ASP LEU LYS GLY GLU ARG VAL GLY ILE ALA LEU SER SEQRES 20 A 381 LYS ASP MSE LYS THR TRP LYS ARG TYR PRO GLY ASN PRO SEQRES 21 A 381 VAL PHE ALA HIS GLU ALA ASP GLY THR ILE THR GLY ASP SEQRES 22 A 381 ALA HIS ILE GLN LYS MSE GLY ASP VAL TYR VAL MSE PHE SEQRES 23 A 381 TYR PHE SER ALA PHE GLU PRO SER ARG LYS TYR LYS ALA SEQRES 24 A 381 PHE ASN THR PHE ALA ALA SER TYR ASP LEU VAL ASN TRP SEQRES 25 A 381 THR ASP TRP HIS GLY ALA ASP LEU ILE ILE PRO SER LYS SEQRES 26 A 381 ASN TYR ASP GLU LEU PHE ALA HIS LYS SER TYR VAL ILE SEQRES 27 A 381 LYS HIS ASP GLY VAL VAL TYR HIS PHE TYR CYS ALA VAL SEQRES 28 A 381 ASN ASN ALA GLU GLN ARG GLY ILE ALA ILE ALA THR SER SEQRES 29 A 381 LYS PRO MSE GLY ARG SER ALA VAL ARG PHE PRO LYS PRO SEQRES 30 A 381 GLU THR LYS ASN MODRES 5MT2 MSE A 34 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 74 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 131 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 148 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 224 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 250 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 279 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 285 MET MODIFIED RESIDUE MODRES 5MT2 MSE A 367 MET MODIFIED RESIDUE HET MSE A 34 8 HET MSE A 74 8 HET MSE A 131 8 HET MSE A 148 13 HET MSE A 224 8 HET MSE A 250 8 HET MSE A 279 8 HET MSE A 285 8 HET MSE A 367 8 HET GOL A 401 6 HET GOL A 402 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 HOH *345(H2 O) HELIX 1 AA1 THR A 30 LYS A 42 1 13 HELIX 2 AA2 GLY A 157 ALA A 163 5 7 HELIX 3 AA3 GLN A 198 LYS A 202 5 5 HELIX 4 AA4 LYS A 325 GLU A 329 5 5 SHEET 1 AA1 4 TYR A 45 VAL A 51 0 SHEET 2 AA1 4 ARG A 357 THR A 363 -1 O ILE A 359 N ALA A 50 SHEET 3 AA1 4 VAL A 343 VAL A 351 -1 N HIS A 346 O ALA A 362 SHEET 4 AA1 4 PHE A 331 HIS A 340 -1 N TYR A 336 O PHE A 347 SHEET 1 AA2 4 LYS A 59 GLN A 68 0 SHEET 2 AA2 4 LYS A 71 TYR A 79 -1 O LEU A 73 N PHE A 66 SHEET 3 AA2 4 TYR A 90 SER A 97 -1 O TRP A 93 N TYR A 76 SHEET 4 AA2 4 ARG A 104 LEU A 110 -1 O LEU A 106 N ILE A 94 SHEET 1 AA3 4 GLN A 121 PRO A 126 0 SHEET 2 AA3 4 HIS A 146 GLY A 153 -1 O THR A 149 N PHE A 125 SHEET 3 AA3 4 PHE A 166 THR A 172 -1 O ALA A 170 N MSE A 148 SHEET 4 AA3 4 GLU A 183 SER A 184 -1 O GLU A 183 N SER A 171 SHEET 1 AA4 4 THR A 204 TRP A 212 0 SHEET 2 AA4 4 PHE A 222 ARG A 231 -1 O VAL A 223 N TYR A 211 SHEET 3 AA4 4 LYS A 238 SER A 247 -1 O ALA A 245 N MSE A 224 SHEET 4 AA4 4 LYS A 254 ARG A 255 -1 O LYS A 254 N LEU A 246 SHEET 1 AA5 7 THR A 204 TRP A 212 0 SHEET 2 AA5 7 PHE A 222 ARG A 231 -1 O VAL A 223 N TYR A 211 SHEET 3 AA5 7 LYS A 238 SER A 247 -1 O ALA A 245 N MSE A 224 SHEET 4 AA5 7 THR A 269 MSE A 279 1 O THR A 269 N GLU A 240 SHEET 5 AA5 7 VAL A 282 ALA A 290 -1 O PHE A 286 N HIS A 275 SHEET 6 AA5 7 ALA A 299 SER A 306 -1 O SER A 306 N TYR A 283 SHEET 7 AA5 7 THR A 313 ASP A 314 -1 O THR A 313 N ALA A 305 LINK C ARG A 33 N MSE A 34 1555 1555 1.33 LINK C MSE A 34 N GLU A 35 1555 1555 1.33 LINK C LEU A 73 N MSE A 74 1555 1555 1.32 LINK C MSE A 74 N THR A 75 1555 1555 1.32 LINK C ASP A 130 N MSE A 131 1555 1555 1.33 LINK C MSE A 131 N GLU A 132 1555 1555 1.34 LINK C TRP A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N THR A 149 1555 1555 1.32 LINK C VAL A 223 N MSE A 224 1555 1555 1.32 LINK C MSE A 224 N PHE A 225 1555 1555 1.32 LINK C ASP A 249 N MSE A 250 1555 1555 1.33 LINK C MSE A 250 N LYS A 251 1555 1555 1.34 LINK C LYS A 278 N MSE A 279 1555 1555 1.33 LINK C MSE A 279 N GLY A 280 1555 1555 1.33 LINK C VAL A 284 N MSE A 285 1555 1555 1.33 LINK C MSE A 285 N PHE A 286 1555 1555 1.34 LINK C PRO A 366 N MSE A 367 1555 1555 1.34 LINK C MSE A 367 N GLY A 368 1555 1555 1.33 CISPEP 1 ASN A 259 PRO A 260 0 -7.63 SITE 1 AC1 9 CYS A 62 GLU A 159 TYR A 206 LYS A 207 SITE 2 AC1 9 ASN A 227 ASP A 273 LYS A 334 HOH A 522 SITE 3 AC1 9 HOH A 597 SITE 1 AC2 4 ARG A 113 GLU A 183 SER A 184 HOH A 504 CRYST1 42.020 78.565 48.793 90.00 108.36 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023798 0.000000 0.007896 0.00000 SCALE2 0.000000 0.012728 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021593 0.00000