HEADER VIRAL PROTEIN 14-JAN-17 5MUY TITLE STRUCTURE OF A C-TERMINAL DOMAIN OF A REPTARENAVIRUS L PROTEIN WITH TITLE 2 M7GTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: L PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINUS, UNP RESIDUES 1721-2046; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAS VIRUS; SOURCE 3 ORGANISM_TAXID: 1223561; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ARENAVIRUS, POLYMERASE, PUTATIVE CAP-BINDING, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.ROSENTHAL,N.GOGREFE,J.REGUERA,D.VOGEL,B.RAUSCHENBERGER,S.CUSACK, AUTHOR 2 S.GUNTHER,S.REINDL REVDAT 3 17-JAN-24 5MUY 1 REMARK ATOM REVDAT 2 24-MAY-17 5MUY 1 JRNL REVDAT 1 17-MAY-17 5MUY 0 JRNL AUTH M.ROSENTHAL,N.GOGREFE,D.VOGEL,J.REGUERA,B.RAUSCHENBERGER, JRNL AUTH 2 S.CUSACK,S.GUNTHER,S.REINDL JRNL TITL STRUCTURAL INSIGHTS INTO REPTARENAVIRUS CAP-SNATCHING JRNL TITL 2 MACHINERY. JRNL REF PLOS PATHOG. V. 13 06400 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 28505175 JRNL DOI 10.1371/JOURNAL.PPAT.1006400 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 45836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.9647 - 5.1160 0.96 2719 147 0.2153 0.2452 REMARK 3 2 5.1160 - 4.0610 0.98 2667 124 0.1561 0.2340 REMARK 3 3 4.0610 - 3.5477 0.97 2577 165 0.1655 0.2288 REMARK 3 4 3.5477 - 3.2233 0.97 2569 131 0.1957 0.2328 REMARK 3 5 3.2233 - 2.9923 0.98 2628 120 0.2161 0.2847 REMARK 3 6 2.9923 - 2.8159 0.99 2601 170 0.2121 0.2948 REMARK 3 7 2.8159 - 2.6748 0.96 2506 145 0.2314 0.2887 REMARK 3 8 2.6748 - 2.5584 0.98 2568 126 0.2428 0.2774 REMARK 3 9 2.5584 - 2.4599 0.98 2558 147 0.2321 0.3395 REMARK 3 10 2.4599 - 2.3750 0.99 2572 153 0.2483 0.2975 REMARK 3 11 2.3750 - 2.3008 0.99 2590 151 0.2564 0.2936 REMARK 3 12 2.3008 - 2.2350 0.96 2515 126 0.2769 0.3711 REMARK 3 13 2.2350 - 2.1761 0.96 2516 123 0.2949 0.3380 REMARK 3 14 2.1761 - 2.1231 0.97 2527 131 0.3091 0.3377 REMARK 3 15 2.1231 - 2.0748 0.95 2510 107 0.3186 0.3264 REMARK 3 16 2.0748 - 2.0306 0.94 2462 123 0.3396 0.3397 REMARK 3 17 2.0306 - 1.9900 0.93 2425 137 0.3731 0.4240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5404 REMARK 3 ANGLE : 0.935 7317 REMARK 3 CHIRALITY : 0.051 831 REMARK 3 PLANARITY : 0.006 927 REMARK 3 DIHEDRAL : 14.365 3292 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MUY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003050. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.1.3 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46169 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 63.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.14810 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5MUS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37% JEFFAMINE ED-2001, 2 MM TCEP AND REMARK 280 100 MM HEPES PH 7.1, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.17000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.03000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.30050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.03000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.17000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.30050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY B 1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 1743 CE REMARK 480 GLU B 1845 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 1754 O HOH B 2201 1.71 REMARK 500 O HOH A 2227 O HOH A 2283 1.84 REMARK 500 O HOH A 2328 O HOH B 2346 1.84 REMARK 500 O HOH A 2261 O HOH A 2296 1.88 REMARK 500 O HOH A 2231 O HOH A 2305 1.92 REMARK 500 O HOH B 2347 O HOH B 2377 1.93 REMARK 500 OH TYR B 1875 O HOH B 2202 1.93 REMARK 500 OE2 GLU B 1917 O HOH B 2203 1.94 REMARK 500 O HOH A 2275 O HOH A 2301 1.94 REMARK 500 O HOH A 2153 O HOH A 2292 1.94 REMARK 500 O HOH B 2306 O HOH B 2343 1.96 REMARK 500 O HOH A 2104 O HOH A 2282 1.97 REMARK 500 O HOH B 2325 O HOH B 2355 1.99 REMARK 500 O HOH A 2225 O HOH A 2281 2.03 REMARK 500 O HOH A 2228 O HOH B 2370 2.04 REMARK 500 OE1 GLU A 1745 O HOH A 2101 2.07 REMARK 500 O PRO A 2 O HOH A 2102 2.08 REMARK 500 O HOH B 2327 O HOH B 2341 2.08 REMARK 500 O HOH A 2130 O HOH A 2190 2.09 REMARK 500 O HOH B 2248 O HOH B 2298 2.10 REMARK 500 O HOH A 2324 O HOH A 2352 2.10 REMARK 500 O HOH A 2320 O HOH A 2347 2.12 REMARK 500 O HOH A 2333 O HOH A 2363 2.12 REMARK 500 O HOH A 2280 O HOH B 2292 2.13 REMARK 500 O HOH A 2287 O HOH A 2336 2.14 REMARK 500 O HOH A 2324 O HOH B 2350 2.14 REMARK 500 OE2 GLU A 1891 O HOH A 2103 2.14 REMARK 500 OG SER B 1786 O HOH B 2204 2.15 REMARK 500 O HOH B 2211 O HOH B 2244 2.16 REMARK 500 OE1 GLN A 1860 O HOH A 2104 2.16 REMARK 500 O HOH A 2118 O HOH A 2337 2.17 REMARK 500 OE2 GLU B 1725 OG1 THR B 1759 2.17 REMARK 500 NH2 ARG B 1963 O ILE B 1995 2.17 REMARK 500 OE2 GLU B 1793 O HOH B 2205 2.17 REMARK 500 O GLU A 1841 O HOH A 2105 2.18 REMARK 500 O HOH A 2313 O HOH B 2342 2.18 REMARK 500 O HOH A 2138 O HOH A 2190 2.18 REMARK 500 O HOH B 2359 O HOH B 2366 2.18 REMARK 500 NZ LYS A 1866 O HOH A 2106 2.18 REMARK 500 O HOH A 2316 O HOH A 2336 2.19 REMARK 500 OD2 ASP A 1880 O HOH A 2107 2.19 REMARK 500 OE1 GLU B 1845 O HOH B 2206 2.19 REMARK 500 O HOH B 2387 O HOH B 2390 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2310 O HOH B 2367 1545 1.98 REMARK 500 O HOH A 2179 O HOH A 2306 3644 2.10 REMARK 500 O HOH A 2294 O HOH B 2249 3644 2.10 REMARK 500 O HOH A 2212 O HOH A 2350 4545 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B1856 C PRO B1857 N 0.147 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1721 -160.27 -104.23 REMARK 500 LYS A1815 44.51 39.81 REMARK 500 TYR A1875 65.32 -162.51 REMARK 500 GLU A2000 -60.14 -101.76 REMARK 500 SER A2001 -156.60 -128.74 REMARK 500 THR A2024 -3.11 71.87 REMARK 500 THR B1721 -176.05 -66.02 REMARK 500 GLU B1756 82.18 -157.65 REMARK 500 ASP B1874 36.97 70.35 REMARK 500 SER B2001 -117.97 -155.33 REMARK 500 ASP B2015 107.66 -167.94 REMARK 500 THR B2024 -4.40 78.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2376 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A2377 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A2378 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A2379 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH B2395 DISTANCE = 6.73 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 MGT B 2101 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MGT B 2101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5MUS RELATED DB: PDB REMARK 900 5MUS CONTAINS THE SAME PROTEIN WITHOUT M7GTP DBREF 5MUY A 1721 2046 UNP J7HBG8 J7HBG8_9VIRU 1721 2046 DBREF 5MUY B 1721 2046 UNP J7HBG8 J7HBG8_9VIRU 1721 2046 SEQADV 5MUY GLY A 1 UNP J7HBG8 EXPRESSION TAG SEQADV 5MUY PRO A 2 UNP J7HBG8 EXPRESSION TAG SEQADV 5MUY GLY B 1 UNP J7HBG8 EXPRESSION TAG SEQADV 5MUY PRO B 2 UNP J7HBG8 EXPRESSION TAG SEQRES 1 A 328 GLY PRO THR ALA VAL GLN GLU LEU ASN ARG ILE CYS ASP SEQRES 2 A 328 GLY MET ILE LEU SER SER ILE LEU ARG PRO GLN MET VAL SEQRES 3 A 328 GLU PRO SER LEU ILE GLY ASP VAL LEU LYS THR GLU PRO SEQRES 4 A 328 PHE THR SER SER LEU GLU VAL LEU LYS ASP ILE LYS VAL SEQRES 5 A 328 SER GLY LEU MET ARG TYR ILE LYS GLN VAL LEU LEU GLY SEQRES 6 A 328 ARG LYS SER TYR TYR LYS PHE GLY GLU GLU HIS ALA ASP SEQRES 7 A 328 GLY ASP GLN ASN LEU PHE ASP TYR GLN PHE THR GLY THR SEQRES 8 A 328 PRO GLU GLU PRO ILE LYS GLY TYR TRP THR THR THR ILE SEQRES 9 A 328 SER TYR ARG ASP SER LYS PRO LYS ILE SER LEU THR ILE SEQRES 10 A 328 ARG GLN GLU PHE VAL GLU GLY GLY VAL GLU SER GLN ALA SEQRES 11 A 328 VAL LEU ALA THR VAL VAL GLY ARG PRO HIS LEU GLN ASP SEQRES 12 A 328 PHE LEU LEU LEU LYS ARG LYS HIS LEU GLU TYR SER ASP SEQRES 13 A 328 TYR PRO GLU SER ILE ASP LEU ILE GLU PHE GLY ASP VAL SEQRES 14 A 328 LYS VAL ILE GLU LYS THR VAL GLY HIS GLY GLN PRO VAL SEQRES 15 A 328 VAL LEU TYR MET ALA SER LEU PHE PRO ILE GLY LEU THR SEQRES 16 A 328 LYS ILE ALA GLU GLN GLY ILE GLY CYS HIS ASN GLU LYS SEQRES 17 A 328 ASN ASP ALA THR LEU LYS SER LEU LEU LYS THR ALA ILE SEQRES 18 A 328 LEU ASN MET THR PRO ASP ASP VAL SER LEU LEU PRO ARG SEQRES 19 A 328 SER LYS LEU ASP ALA ILE ASP HIS VAL VAL ARG ASN VAL SEQRES 20 A 328 TYR LEU ARG PHE ASN ASN SER SER ALA VAL SER TYR GLY SEQRES 21 A 328 LEU HIS LYS LEU GLN SER PHE GLU LYS ILE LEU GLN LEU SEQRES 22 A 328 ASN GLY ARG ILE TYR GLU THR LYS GLU SER THR LEU VAL SEQRES 23 A 328 PHE HIS HIS LYS LYS GLY VAL LEU VAL GLU ASP LEU LYS SEQRES 24 A 328 GLY LEU MET SER TYR LYS THR LEU ARG VAL SER GLU TRP SEQRES 25 A 328 ARG GLU LYS GLN GLU PRO GLU GLU ALA ARG VAL GLU VAL SEQRES 26 A 328 LEU GLU GLU SEQRES 1 B 328 GLY PRO THR ALA VAL GLN GLU LEU ASN ARG ILE CYS ASP SEQRES 2 B 328 GLY MET ILE LEU SER SER ILE LEU ARG PRO GLN MET VAL SEQRES 3 B 328 GLU PRO SER LEU ILE GLY ASP VAL LEU LYS THR GLU PRO SEQRES 4 B 328 PHE THR SER SER LEU GLU VAL LEU LYS ASP ILE LYS VAL SEQRES 5 B 328 SER GLY LEU MET ARG TYR ILE LYS GLN VAL LEU LEU GLY SEQRES 6 B 328 ARG LYS SER TYR TYR LYS PHE GLY GLU GLU HIS ALA ASP SEQRES 7 B 328 GLY ASP GLN ASN LEU PHE ASP TYR GLN PHE THR GLY THR SEQRES 8 B 328 PRO GLU GLU PRO ILE LYS GLY TYR TRP THR THR THR ILE SEQRES 9 B 328 SER TYR ARG ASP SER LYS PRO LYS ILE SER LEU THR ILE SEQRES 10 B 328 ARG GLN GLU PHE VAL GLU GLY GLY VAL GLU SER GLN ALA SEQRES 11 B 328 VAL LEU ALA THR VAL VAL GLY ARG PRO HIS LEU GLN ASP SEQRES 12 B 328 PHE LEU LEU LEU LYS ARG LYS HIS LEU GLU TYR SER ASP SEQRES 13 B 328 TYR PRO GLU SER ILE ASP LEU ILE GLU PHE GLY ASP VAL SEQRES 14 B 328 LYS VAL ILE GLU LYS THR VAL GLY HIS GLY GLN PRO VAL SEQRES 15 B 328 VAL LEU TYR MET ALA SER LEU PHE PRO ILE GLY LEU THR SEQRES 16 B 328 LYS ILE ALA GLU GLN GLY ILE GLY CYS HIS ASN GLU LYS SEQRES 17 B 328 ASN ASP ALA THR LEU LYS SER LEU LEU LYS THR ALA ILE SEQRES 18 B 328 LEU ASN MET THR PRO ASP ASP VAL SER LEU LEU PRO ARG SEQRES 19 B 328 SER LYS LEU ASP ALA ILE ASP HIS VAL VAL ARG ASN VAL SEQRES 20 B 328 TYR LEU ARG PHE ASN ASN SER SER ALA VAL SER TYR GLY SEQRES 21 B 328 LEU HIS LYS LEU GLN SER PHE GLU LYS ILE LEU GLN LEU SEQRES 22 B 328 ASN GLY ARG ILE TYR GLU THR LYS GLU SER THR LEU VAL SEQRES 23 B 328 PHE HIS HIS LYS LYS GLY VAL LEU VAL GLU ASP LEU LYS SEQRES 24 B 328 GLY LEU MET SER TYR LYS THR LEU ARG VAL SER GLU TRP SEQRES 25 B 328 ARG GLU LYS GLN GLU PRO GLU GLU ALA ARG VAL GLU VAL SEQRES 26 B 328 LEU GLU GLU HET MGT B2101 33 HETNAM MGT 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE FORMUL 3 MGT C11 H20 N5 O14 P3 FORMUL 4 HOH *474(H2 O) HELIX 1 AA1 THR A 1721 ARG A 1740 1 20 HELIX 2 AA2 GLU A 1745 GLU A 1756 1 12 HELIX 3 AA3 SER A 1761 LYS A 1766 1 6 HELIX 4 AA4 SER A 1771 LEU A 1782 1 12 HELIX 5 AA5 PRO A 1857 SER A 1873 1 17 HELIX 6 AA6 TYR A 1875 LEU A 1881 1 7 HELIX 7 AA7 GLU A 1883 VAL A 1887 5 5 HELIX 8 AA8 ASN A 1924 ASN A 1941 1 18 HELIX 9 AA9 THR A 1943 LEU A 1949 1 7 HELIX 10 AB1 PRO A 1951 ARG A 1968 1 18 HELIX 11 AB2 ASN A 1970 GLY A 1978 1 9 HELIX 12 AB3 LEU A 1979 LYS A 1981 5 3 HELIX 13 AB4 LEU A 1982 GLY A 1993 1 12 HELIX 14 AB5 GLN A 2034 VAL A 2041 1 8 HELIX 15 AB6 THR B 1721 ARG B 1740 1 20 HELIX 16 AB7 GLU B 1745 GLU B 1756 1 12 HELIX 17 AB8 SER B 1761 LYS B 1766 1 6 HELIX 18 AB9 SER B 1771 LEU B 1782 1 12 HELIX 19 AC1 PRO B 1857 SER B 1873 1 17 HELIX 20 AC2 PRO B 1876 LEU B 1881 1 6 HELIX 21 AC3 GLU B 1883 VAL B 1887 5 5 HELIX 22 AC4 ASN B 1924 ASN B 1941 1 18 HELIX 23 AC5 THR B 1943 LEU B 1949 1 7 HELIX 24 AC6 PRO B 1951 LEU B 1967 1 17 HELIX 25 AC7 ASN B 1970 GLY B 1978 1 9 HELIX 26 AC8 LEU B 1979 LYS B 1981 5 3 HELIX 27 AC9 LEU B 1982 GLY B 1993 1 12 HELIX 28 AD1 GLN B 2034 ALA B 2039 1 6 SHEET 1 AA1 4 GLN A1742 MET A1743 0 SHEET 2 AA1 4 VAL A1900 TYR A1903 -1 O LEU A1902 N GLN A1742 SHEET 3 AA1 4 SER A1906 PRO A1909 -1 O PHE A1908 N VAL A1901 SHEET 4 AA1 4 ALA A1916 GLU A1917 -1 O ALA A1916 N LEU A1907 SHEET 1 AA210 LYS A1888 LYS A1892 0 SHEET 2 AA210 VAL A1844 VAL A1853 1 N LEU A1850 O LYS A1888 SHEET 3 AA210 SER A1832 PHE A1839 -1 N THR A1834 O VAL A1849 SHEET 4 AA210 TYR A1817 ARG A1825 -1 N TRP A1818 O GLN A1837 SHEET 5 AA210 ASP A1798 THR A1807 -1 N LEU A1801 O ARG A1825 SHEET 6 AA210 ASP B1798 THR B1807 1 O PHE B1806 N TYR A1804 SHEET 7 AA210 TRP B1818 ARG B1825 -1 O ARG B1825 N LEU B1801 SHEET 8 AA210 SER B1832 VAL B1840 -1 O LEU B1833 N ILE B1822 SHEET 9 AA210 GLY B1843 VAL B1853 -1 O GLN B1847 N ARG B1836 SHEET 10 AA210 LYS B1888 LYS B1892 1 O LYS B1892 N THR B1852 SHEET 1 AA3 6 ILE A1995 GLU A1997 0 SHEET 2 AA3 6 THR A2002 HIS A2006 -1 O LEU A2003 N TYR A1996 SHEET 3 AA3 6 GLY A2010 GLU A2014 -1 O LEU A2012 N VAL A2004 SHEET 4 AA3 6 LEU A2025 GLU A2029 -1 O SER A2028 N VAL A2013 SHEET 5 AA3 6 MET A2020 TYR A2022 -1 N TYR A2022 O LEU A2025 SHEET 6 AA3 6 GLU B2042 VAL B2043 1 O GLU B2042 N SER A2021 SHEET 1 AA4 6 GLU A2042 VAL A2043 0 SHEET 2 AA4 6 MET B2020 TYR B2022 1 O SER B2021 N GLU A2042 SHEET 3 AA4 6 LEU B2025 GLU B2029 -1 O VAL B2027 N MET B2020 SHEET 4 AA4 6 GLY B2010 GLU B2014 -1 N VAL B2013 O SER B2028 SHEET 5 AA4 6 THR B2002 HIS B2006 -1 N VAL B2004 O LEU B2012 SHEET 6 AA4 6 ILE B1995 GLU B1997 -1 N TYR B1996 O LEU B2003 SHEET 1 AA5 3 GLN B1742 MET B1743 0 SHEET 2 AA5 3 GLN B1898 TYR B1903 -1 O LEU B1902 N GLN B1742 SHEET 3 AA5 3 LYS B1789 PHE B1790 -1 N PHE B1790 O GLN B1898 SHEET 1 AA6 4 GLN B1742 MET B1743 0 SHEET 2 AA6 4 GLN B1898 TYR B1903 -1 O LEU B1902 N GLN B1742 SHEET 3 AA6 4 SER B1906 PRO B1909 -1 O PHE B1908 N VAL B1901 SHEET 4 AA6 4 ALA B1916 GLU B1917 -1 O ALA B1916 N LEU B1907 CISPEP 1 PRO A 2 THR A 1721 0 -7.55 CISPEP 2 LYS A 1828 PRO A 1829 0 -9.84 CISPEP 3 ILE A 1910 GLY A 1911 0 -7.88 CISPEP 4 LYS B 1828 PRO B 1829 0 2.11 SITE 1 AC1 15 PRO A1813 PHE A1839 VAL A1840 GLU A1841 SITE 2 AC1 15 GLY A1842 HIS B1896 HIS B1923 ASN B1924 SITE 3 AC1 15 ASP B1928 LYS B1932 LEU B1967 ARG B1968 SITE 4 AC1 15 LYS B1999 HOH B2227 HOH B2234 CRYST1 76.340 76.601 116.060 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013099 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013055 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008616 0.00000