HEADER VIRAL PROTEIN 14-JAN-17 5MV0 TITLE STRUCTURE OF AN N-TERMINAL DOMAIN OF A REPTARENAVIRUS L PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: L PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: N-TERMINUS, UNP RESIDUES 1-205; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAS VIRUS; SOURCE 3 ORGANISM_TAXID: 1223561; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ARENAVIRUS, POLYMERASE, ENDONUCLEASE, CAP-SNATCHING, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.ROSENTHAL,N.GOGREFE,J.REGUERA,D.VOGEL,B.RAUSCHENBERGER,S.CUSACK, AUTHOR 2 S.GUNTHER,S.REINDL REVDAT 4 08-MAY-24 5MV0 1 REMARK REVDAT 3 14-MAR-18 5MV0 1 REMARK REVDAT 2 24-MAY-17 5MV0 1 JRNL REVDAT 1 17-MAY-17 5MV0 0 JRNL AUTH M.ROSENTHAL,N.GOGREFE,D.VOGEL,J.REGUERA,B.RAUSCHENBERGER, JRNL AUTH 2 S.CUSACK,S.GUNTHER,S.REINDL JRNL TITL STRUCTURAL INSIGHTS INTO REPTARENAVIRUS CAP-SNATCHING JRNL TITL 2 MACHINERY. JRNL REF PLOS PATHOG. V. 13 06400 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 28505175 JRNL DOI 10.1371/JOURNAL.PPAT.1006400 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 90.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 74918 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 90.8282 - 5.7926 1.00 2854 145 0.2116 0.2236 REMARK 3 2 5.7926 - 4.5978 1.00 2749 136 0.1784 0.2100 REMARK 3 3 4.5978 - 4.0166 1.00 2676 146 0.1502 0.1758 REMARK 3 4 4.0166 - 3.6494 1.00 2675 142 0.1562 0.1993 REMARK 3 5 3.6494 - 3.3878 1.00 2674 129 0.1679 0.2247 REMARK 3 6 3.3878 - 3.1880 1.00 2661 129 0.1733 0.2019 REMARK 3 7 3.1880 - 3.0284 1.00 2624 156 0.1753 0.2130 REMARK 3 8 3.0284 - 2.8965 1.00 2656 130 0.1663 0.2274 REMARK 3 9 2.8965 - 2.7850 1.00 2648 145 0.1752 0.1912 REMARK 3 10 2.7850 - 2.6889 1.00 2572 170 0.1602 0.1873 REMARK 3 11 2.6889 - 2.6048 1.00 2648 118 0.1638 0.2216 REMARK 3 12 2.6048 - 2.5304 1.00 2604 155 0.1636 0.2295 REMARK 3 13 2.5304 - 2.4637 1.00 2606 142 0.1660 0.1897 REMARK 3 14 2.4637 - 2.4036 1.00 2635 152 0.1672 0.2202 REMARK 3 15 2.4036 - 2.3490 1.00 2602 134 0.1649 0.2091 REMARK 3 16 2.3490 - 2.2990 1.00 2602 135 0.1638 0.2305 REMARK 3 17 2.2990 - 2.2530 1.00 2625 137 0.1687 0.2195 REMARK 3 18 2.2530 - 2.2105 1.00 2611 144 0.1670 0.2273 REMARK 3 19 2.2105 - 2.1710 1.00 2590 142 0.1668 0.1967 REMARK 3 20 2.1710 - 2.1342 1.00 2609 137 0.1666 0.2348 REMARK 3 21 2.1342 - 2.0998 1.00 2601 142 0.1745 0.2551 REMARK 3 22 2.0998 - 2.0675 1.00 2627 135 0.1869 0.2386 REMARK 3 23 2.0675 - 2.0370 1.00 2574 125 0.1890 0.2726 REMARK 3 24 2.0370 - 2.0084 1.00 2651 119 0.1976 0.2627 REMARK 3 25 2.0084 - 1.9812 1.00 2586 155 0.1999 0.2401 REMARK 3 26 1.9812 - 1.9555 1.00 2611 123 0.2070 0.2996 REMARK 3 27 1.9555 - 1.9310 1.00 2594 130 0.2093 0.2635 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6713 REMARK 3 ANGLE : 0.865 9124 REMARK 3 CHIRALITY : 0.053 1062 REMARK 3 PLANARITY : 0.005 1156 REMARK 3 DIHEDRAL : 14.368 4220 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MV0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.1.3 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74927 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.931 REMARK 200 RESOLUTION RANGE LOW (A) : 90.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 200, 2.5% PEG 3000, AND 100 MM REMARK 280 MES, PH 5.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.48500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.92400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.17100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.92400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.48500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.17100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 56.97000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -56.17100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 76.92400 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 56.97000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 56.17100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 76.92400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 GLU A 200 REMARK 465 PHE A 201 REMARK 465 SER A 202 REMARK 465 GLY A 203 REMARK 465 THR A 204 REMARK 465 LYS A 205 REMARK 465 GLY B -1 REMARK 465 GLY C -1 REMARK 465 PRO C 0 REMARK 465 PHE C 194 REMARK 465 LYS C 195 REMARK 465 THR C 196 REMARK 465 LEU C 197 REMARK 465 THR C 198 REMARK 465 SER C 199 REMARK 465 GLU C 200 REMARK 465 PHE C 201 REMARK 465 SER C 202 REMARK 465 GLY C 203 REMARK 465 THR C 204 REMARK 465 LYS C 205 REMARK 465 GLY D -1 REMARK 465 PRO D 0 REMARK 465 THR D 198 REMARK 465 SER D 199 REMARK 465 GLU D 200 REMARK 465 PHE D 201 REMARK 465 SER D 202 REMARK 465 GLY D 203 REMARK 465 THR D 204 REMARK 465 LYS D 205 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS D 172 O HOH D 401 1.89 REMARK 500 O HOH A 526 O HOH A 528 2.02 REMARK 500 O HOH A 422 O HOH C 518 2.03 REMARK 500 O HOH B 527 O HOH B 543 2.07 REMARK 500 O HOH C 416 O HOH C 427 2.10 REMARK 500 OD1 ASN C 6 O HOH C 401 2.14 REMARK 500 O HOH B 522 O HOH B 527 2.15 REMARK 500 O HOH B 405 O HOH B 466 2.15 REMARK 500 O HOH C 558 O HOH C 563 2.16 REMARK 500 O HOH A 532 O HOH A 549 2.16 REMARK 500 O TRP D 134 O HOH D 402 2.16 REMARK 500 O HOH D 512 O HOH D 521 2.17 REMARK 500 NH2 ARG A 113 O HOH A 401 2.17 REMARK 500 O HOH A 401 O HOH A 536 2.17 REMARK 500 O ALA B 102 O HOH B 401 2.18 REMARK 500 O HOH D 519 O HOH D 529 2.18 REMARK 500 O HOH C 509 O HOH C 576 2.18 REMARK 500 O HOH A 462 O HOH A 531 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 411 O HOH D 401 3645 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 172 CD - CE - NZ ANGL. DEV. = 15.0 DEGREES REMARK 500 GLN C 25 CA - C - O ANGL. DEV. = 13.7 DEGREES REMARK 500 LEU C 156 CA - CB - CG ANGL. DEV. = -15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET C 95 55.51 39.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 D 301 DBREF 5MV0 A 1 205 UNP J7HBG8 J7HBG8_9VIRU 1 205 DBREF 5MV0 B 1 205 UNP J7HBG8 J7HBG8_9VIRU 1 205 DBREF 5MV0 C 1 205 UNP J7HBG8 J7HBG8_9VIRU 1 205 DBREF 5MV0 D 1 205 UNP J7HBG8 J7HBG8_9VIRU 1 205 SEQADV 5MV0 GLY A -1 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 PRO A 0 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 GLY B -1 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 PRO B 0 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 GLY C -1 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 PRO C 0 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 GLY D -1 UNP J7HBG8 EXPRESSION TAG SEQADV 5MV0 PRO D 0 UNP J7HBG8 EXPRESSION TAG SEQRES 1 A 207 GLY PRO MET ASP PRO ASP THR ASN LEU LEU LYS ASN VAL SEQRES 2 A 207 ILE LEU GLU ILE LEU SER ILE GLU PRO ASP LEU TYR LYS SEQRES 3 A 207 GLN SER SER ILE VAL ASP ASP PRO TYR LYS LEU ALA MET SEQRES 4 A 207 SER ALA ILE ARG LEU ARG ALA THR ILE HIS GLU LEU ASN SEQRES 5 A 207 CYS CYS ARG ASP LEU GLY ILE ILE HIS ASN THR LYS GLU SEQRES 6 A 207 ILE SER LEU ASN MET VAL ILE ASP ARG ALA ILE PRO ILE SEQRES 7 A 207 HIS PRO THR PHE GLN HIS ILE VAL PRO ASP GLY TYR THR SEQRES 8 A 207 ILE ASP ARG ALA ASN MET THR ILE ILE VAL LEU GLU ALA SEQRES 9 A 207 SER THR ARG SER MET PRO SER ASP GLN LYS ARG LYS ILE SEQRES 10 A 207 THR SER ASP LYS LEU LYS TYR SER GLY VAL GLU ASP HIS SEQRES 11 A 207 LEU LYS HIS GLU GLY TRP LEU PHE ASN ILE ILE VAL ILE SEQRES 12 A 207 SER GLU THR LYS PRO ARG ASN GLY ASN VAL PRO GLU ARG SEQRES 13 A 207 LEU LEU PHE GLU LEU LEU LYS LEU SER LEU SER ILE LEU SEQRES 14 A 207 SER TYR SER ASP LYS SER SER GLN TRP ILE SER GLU GLU SEQRES 15 A 207 GLU TYR ASP GLU LEU LYS ARG SER LEU THR THR TYR ASP SEQRES 16 A 207 PHE LYS THR LEU THR SER GLU PHE SER GLY THR LYS SEQRES 1 B 207 GLY PRO MET ASP PRO ASP THR ASN LEU LEU LYS ASN VAL SEQRES 2 B 207 ILE LEU GLU ILE LEU SER ILE GLU PRO ASP LEU TYR LYS SEQRES 3 B 207 GLN SER SER ILE VAL ASP ASP PRO TYR LYS LEU ALA MET SEQRES 4 B 207 SER ALA ILE ARG LEU ARG ALA THR ILE HIS GLU LEU ASN SEQRES 5 B 207 CYS CYS ARG ASP LEU GLY ILE ILE HIS ASN THR LYS GLU SEQRES 6 B 207 ILE SER LEU ASN MET VAL ILE ASP ARG ALA ILE PRO ILE SEQRES 7 B 207 HIS PRO THR PHE GLN HIS ILE VAL PRO ASP GLY TYR THR SEQRES 8 B 207 ILE ASP ARG ALA ASN MET THR ILE ILE VAL LEU GLU ALA SEQRES 9 B 207 SER THR ARG SER MET PRO SER ASP GLN LYS ARG LYS ILE SEQRES 10 B 207 THR SER ASP LYS LEU LYS TYR SER GLY VAL GLU ASP HIS SEQRES 11 B 207 LEU LYS HIS GLU GLY TRP LEU PHE ASN ILE ILE VAL ILE SEQRES 12 B 207 SER GLU THR LYS PRO ARG ASN GLY ASN VAL PRO GLU ARG SEQRES 13 B 207 LEU LEU PHE GLU LEU LEU LYS LEU SER LEU SER ILE LEU SEQRES 14 B 207 SER TYR SER ASP LYS SER SER GLN TRP ILE SER GLU GLU SEQRES 15 B 207 GLU TYR ASP GLU LEU LYS ARG SER LEU THR THR TYR ASP SEQRES 16 B 207 PHE LYS THR LEU THR SER GLU PHE SER GLY THR LYS SEQRES 1 C 207 GLY PRO MET ASP PRO ASP THR ASN LEU LEU LYS ASN VAL SEQRES 2 C 207 ILE LEU GLU ILE LEU SER ILE GLU PRO ASP LEU TYR LYS SEQRES 3 C 207 GLN SER SER ILE VAL ASP ASP PRO TYR LYS LEU ALA MET SEQRES 4 C 207 SER ALA ILE ARG LEU ARG ALA THR ILE HIS GLU LEU ASN SEQRES 5 C 207 CYS CYS ARG ASP LEU GLY ILE ILE HIS ASN THR LYS GLU SEQRES 6 C 207 ILE SER LEU ASN MET VAL ILE ASP ARG ALA ILE PRO ILE SEQRES 7 C 207 HIS PRO THR PHE GLN HIS ILE VAL PRO ASP GLY TYR THR SEQRES 8 C 207 ILE ASP ARG ALA ASN MET THR ILE ILE VAL LEU GLU ALA SEQRES 9 C 207 SER THR ARG SER MET PRO SER ASP GLN LYS ARG LYS ILE SEQRES 10 C 207 THR SER ASP LYS LEU LYS TYR SER GLY VAL GLU ASP HIS SEQRES 11 C 207 LEU LYS HIS GLU GLY TRP LEU PHE ASN ILE ILE VAL ILE SEQRES 12 C 207 SER GLU THR LYS PRO ARG ASN GLY ASN VAL PRO GLU ARG SEQRES 13 C 207 LEU LEU PHE GLU LEU LEU LYS LEU SER LEU SER ILE LEU SEQRES 14 C 207 SER TYR SER ASP LYS SER SER GLN TRP ILE SER GLU GLU SEQRES 15 C 207 GLU TYR ASP GLU LEU LYS ARG SER LEU THR THR TYR ASP SEQRES 16 C 207 PHE LYS THR LEU THR SER GLU PHE SER GLY THR LYS SEQRES 1 D 207 GLY PRO MET ASP PRO ASP THR ASN LEU LEU LYS ASN VAL SEQRES 2 D 207 ILE LEU GLU ILE LEU SER ILE GLU PRO ASP LEU TYR LYS SEQRES 3 D 207 GLN SER SER ILE VAL ASP ASP PRO TYR LYS LEU ALA MET SEQRES 4 D 207 SER ALA ILE ARG LEU ARG ALA THR ILE HIS GLU LEU ASN SEQRES 5 D 207 CYS CYS ARG ASP LEU GLY ILE ILE HIS ASN THR LYS GLU SEQRES 6 D 207 ILE SER LEU ASN MET VAL ILE ASP ARG ALA ILE PRO ILE SEQRES 7 D 207 HIS PRO THR PHE GLN HIS ILE VAL PRO ASP GLY TYR THR SEQRES 8 D 207 ILE ASP ARG ALA ASN MET THR ILE ILE VAL LEU GLU ALA SEQRES 9 D 207 SER THR ARG SER MET PRO SER ASP GLN LYS ARG LYS ILE SEQRES 10 D 207 THR SER ASP LYS LEU LYS TYR SER GLY VAL GLU ASP HIS SEQRES 11 D 207 LEU LYS HIS GLU GLY TRP LEU PHE ASN ILE ILE VAL ILE SEQRES 12 D 207 SER GLU THR LYS PRO ARG ASN GLY ASN VAL PRO GLU ARG SEQRES 13 D 207 LEU LEU PHE GLU LEU LEU LYS LEU SER LEU SER ILE LEU SEQRES 14 D 207 SER TYR SER ASP LYS SER SER GLN TRP ILE SER GLU GLU SEQRES 15 D 207 GLU TYR ASP GLU LEU LYS ARG SER LEU THR THR TYR ASP SEQRES 16 D 207 PHE LYS THR LEU THR SER GLU PHE SER GLY THR LYS HET PO4 A 301 5 HET PO4 B 301 5 HET PO4 C 301 5 HET PO4 D 301 5 HETNAM PO4 PHOSPHATE ION FORMUL 5 PO4 4(O4 P 3-) FORMUL 9 HOH *620(H2 O) HELIX 1 AA1 MET A 1 GLU A 19 1 19 HELIX 2 AA2 PRO A 20 SER A 26 5 7 HELIX 3 AA3 ASP A 31 GLY A 56 1 26 HELIX 4 AA4 SER A 65 ILE A 74 1 10 HELIX 5 AA5 MET A 107 LYS A 121 1 15 HELIX 6 AA6 GLY A 124 GLU A 132 1 9 HELIX 7 AA7 PRO A 152 TYR A 169 1 18 HELIX 8 AA8 SER A 170 TRP A 176 5 7 HELIX 9 AA9 SER A 178 THR A 191 1 14 HELIX 10 AB1 PHE A 194 SER A 199 1 6 HELIX 11 AB2 MET B 1 GLU B 19 1 19 HELIX 12 AB3 PRO B 20 SER B 26 5 7 HELIX 13 AB4 ASP B 31 GLY B 56 1 26 HELIX 14 AB5 SER B 65 ARG B 72 1 8 HELIX 15 AB6 MET B 107 LYS B 121 1 15 HELIX 16 AB7 GLY B 124 GLU B 132 1 9 HELIX 17 AB8 PRO B 152 TYR B 169 1 18 HELIX 18 AB9 SER B 170 TRP B 176 5 7 HELIX 19 AC1 SER B 178 THR B 191 1 14 HELIX 20 AC2 ASP B 193 SER B 199 1 7 HELIX 21 AC3 ASP C 2 GLU C 19 1 18 HELIX 22 AC4 PRO C 20 GLN C 25 5 6 HELIX 23 AC5 ASP C 31 GLY C 56 1 26 HELIX 24 AC6 SER C 65 ILE C 74 1 10 HELIX 25 AC7 MET C 107 LYS C 121 1 15 HELIX 26 AC8 GLY C 124 GLU C 132 1 9 HELIX 27 AC9 PRO C 152 TYR C 169 1 18 HELIX 28 AD1 SER C 170 TRP C 176 5 7 HELIX 29 AD2 SER C 178 THR C 191 1 14 HELIX 30 AD3 ASP D 2 GLU D 19 1 18 HELIX 31 AD4 PRO D 20 GLN D 25 5 6 HELIX 32 AD5 ASP D 31 GLY D 56 1 26 HELIX 33 AD6 SER D 65 ARG D 72 1 8 HELIX 34 AD7 MET D 107 LYS D 121 1 15 HELIX 35 AD8 GLY D 124 GLU D 132 1 9 HELIX 36 AD9 PRO D 152 TYR D 169 1 18 HELIX 37 AE1 SER D 170 TRP D 176 5 7 HELIX 38 AE2 SER D 178 THR D 191 1 14 HELIX 39 AE3 ASP D 193 LEU D 197 5 5 SHEET 1 AA1 4 ILE A 58 HIS A 59 0 SHEET 2 AA1 4 GLY A 87 ASP A 91 -1 O TYR A 88 N ILE A 58 SHEET 3 AA1 4 THR A 96 THR A 104 -1 O THR A 96 N ASP A 91 SHEET 4 AA1 4 LEU A 135 GLU A 143 1 O ILE A 141 N GLU A 101 SHEET 1 AA2 4 ILE B 58 HIS B 59 0 SHEET 2 AA2 4 GLY B 87 ASP B 91 -1 O TYR B 88 N ILE B 58 SHEET 3 AA2 4 THR B 96 THR B 104 -1 O THR B 96 N ASP B 91 SHEET 4 AA2 4 LEU B 135 GLU B 143 1 O ILE B 139 N VAL B 99 SHEET 1 AA3 4 ILE C 58 HIS C 59 0 SHEET 2 AA3 4 GLY C 87 ASP C 91 -1 O TYR C 88 N ILE C 58 SHEET 3 AA3 4 THR C 96 THR C 104 -1 O THR C 96 N ASP C 91 SHEET 4 AA3 4 LEU C 135 GLU C 143 1 O ILE C 141 N GLU C 101 SHEET 1 AA4 4 ILE D 58 HIS D 59 0 SHEET 2 AA4 4 GLY D 87 ASP D 91 -1 O TYR D 88 N ILE D 58 SHEET 3 AA4 4 THR D 96 THR D 104 -1 O THR D 96 N ASP D 91 SHEET 4 AA4 4 LEU D 135 GLU D 143 1 O ILE D 139 N VAL D 99 SITE 1 AC1 8 SER A 65 ASN A 67 HIS A 82 HOH A 417 SITE 2 AC1 8 HOH A 481 LYS C 114 SER C 117 HOH C 461 SITE 1 AC2 9 SER B 65 ASN B 67 MET B 68 HIS B 82 SITE 2 AC2 9 HOH B 430 HOH B 431 HOH B 482 LYS D 114 SITE 3 AC2 9 SER D 117 SITE 1 AC3 9 ARG A 113 LYS A 114 SER A 117 SER C 65 SITE 2 AC3 9 ASN C 67 HIS C 82 HOH C 418 HOH C 425 SITE 3 AC3 9 HOH C 482 SITE 1 AC4 10 LYS B 114 SER B 117 SER D 65 ASN D 67 SITE 2 AC4 10 MET D 68 HIS D 82 HOH D 403 HOH D 429 SITE 3 AC4 10 HOH D 447 HOH D 456 CRYST1 56.970 112.342 153.848 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017553 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006500 0.00000