HEADER TRANSCRIPTION 23-JAN-17 5MXK TITLE STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTIONAL REGULATORY TITLE 2 REPRESSOR PROTEIN (ETHR) IN COMPLEX WITH FRAGMENT 7G9. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR ETHR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: ETHR, ETAR, RV3855; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ETHR, REPRESSOR, TETR, MYCOBACTERIUM TUBERCULOSIS, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR V.MENDES,D.S.-H.CHAN,S.E.THOMAS,B.MCCONNELL,D.MATAK-VINKOVIC, AUTHOR 2 A.G.COYNE,C.ABELL,T.L.BLUNDELL REVDAT 4 17-JAN-24 5MXK 1 REMARK REVDAT 3 13-SEP-17 5MXK 1 REMARK REVDAT 2 21-JUN-17 5MXK 1 JRNL REVDAT 1 31-MAY-17 5MXK 0 JRNL AUTH D.S.CHAN,V.MENDES,S.E.THOMAS,B.N.MCCONNELL,D.MATAK-VINKOVIC, JRNL AUTH 2 A.G.COYNE,T.L.BLUNDELL,C.ABELL JRNL TITL FRAGMENT SCREENING AGAINST THE ETHR-DNA INTERACTION BY JRNL TITL 2 NATIVE MASS SPECTROMETRY. JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 56 7488 2017 JRNL REFN ESSN 1521-3773 JRNL PMID 28513917 JRNL DOI 10.1002/ANIE.201702888 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 18531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.6293 - 3.6957 1.00 2821 146 0.1686 0.1874 REMARK 3 2 3.6957 - 2.9334 1.00 2689 137 0.1747 0.2432 REMARK 3 3 2.9334 - 2.5626 1.00 2613 144 0.1756 0.2057 REMARK 3 4 2.5626 - 2.3283 1.00 2617 138 0.1754 0.2355 REMARK 3 5 2.3283 - 2.1614 0.85 2201 126 0.2063 0.2659 REMARK 3 6 2.1614 - 2.0340 0.80 2076 106 0.2382 0.2683 REMARK 3 7 2.0340 - 1.9321 1.00 2585 132 0.2901 0.3191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1534 REMARK 3 ANGLE : 0.758 2090 REMARK 3 CHIRALITY : 0.043 241 REMARK 3 PLANARITY : 0.004 271 REMARK 3 DIHEDRAL : 15.536 907 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 146.1087 50.1286 -6.4460 REMARK 3 T TENSOR REMARK 3 T11: 0.5080 T22: 0.2877 REMARK 3 T33: 0.3752 T12: -0.1662 REMARK 3 T13: 0.0236 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 7.6062 L22: 2.9667 REMARK 3 L33: 6.9709 L12: -2.9539 REMARK 3 L13: -0.1881 L23: 2.7549 REMARK 3 S TENSOR REMARK 3 S11: 0.1896 S12: 0.2398 S13: 0.2523 REMARK 3 S21: -1.3070 S22: 0.0450 S23: -0.6746 REMARK 3 S31: -0.4215 S32: -0.0627 S33: -0.1384 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.6089 58.4368 -1.0879 REMARK 3 T TENSOR REMARK 3 T11: 0.5904 T22: 0.2897 REMARK 3 T33: 0.4340 T12: -0.2075 REMARK 3 T13: -0.1140 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.5509 L22: 4.9327 REMARK 3 L33: 4.4929 L12: 0.6519 REMARK 3 L13: 0.3609 L23: -0.4163 REMARK 3 S TENSOR REMARK 3 S11: -0.1915 S12: 0.1910 S13: -0.1812 REMARK 3 S21: -0.2331 S22: 0.2354 S23: -0.4309 REMARK 3 S31: 0.4688 S32: -0.0564 S33: -0.0364 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 135.5565 41.3453 3.2689 REMARK 3 T TENSOR REMARK 3 T11: 0.4830 T22: 0.1952 REMARK 3 T33: 0.3055 T12: 0.0727 REMARK 3 T13: 0.0122 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 5.7687 L22: 4.8734 REMARK 3 L33: 3.6669 L12: 5.3526 REMARK 3 L13: -1.4805 L23: -1.7416 REMARK 3 S TENSOR REMARK 3 S11: 0.4302 S12: 0.0731 S13: 0.4128 REMARK 3 S21: 0.6444 S22: -0.1816 S23: 0.2820 REMARK 3 S31: -0.6719 S32: -0.2332 S33: -0.3392 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 125.7594 27.5100 -2.0980 REMARK 3 T TENSOR REMARK 3 T11: 0.2730 T22: 0.3564 REMARK 3 T33: 0.3521 T12: 0.0918 REMARK 3 T13: -0.0383 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 4.7915 L22: 5.0025 REMARK 3 L33: 3.5969 L12: 1.7538 REMARK 3 L13: 0.2812 L23: -0.9931 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: -0.0731 S13: 0.0642 REMARK 3 S21: -0.2610 S22: 0.1124 S23: 0.8955 REMARK 3 S31: -0.1238 S32: -0.6406 S33: -0.0731 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 146.0643 37.8501 -1.8930 REMARK 3 T TENSOR REMARK 3 T11: 0.4151 T22: 0.2933 REMARK 3 T33: 0.4598 T12: -0.0516 REMARK 3 T13: 0.0074 T23: -0.0307 REMARK 3 L TENSOR REMARK 3 L11: 5.2042 L22: 2.7910 REMARK 3 L33: 5.4434 L12: -0.7478 REMARK 3 L13: 5.3284 L23: -0.7234 REMARK 3 S TENSOR REMARK 3 S11: -0.3332 S12: 0.0441 S13: -0.6904 REMARK 3 S21: -0.0194 S22: 0.3523 S23: -0.5236 REMARK 3 S31: -0.1323 S32: 0.2416 S33: -0.1853 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 133.5069 25.5194 10.2952 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.2548 REMARK 3 T33: 0.1689 T12: 0.1002 REMARK 3 T13: 0.0059 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 4.2442 L22: 7.9985 REMARK 3 L33: 2.9890 L12: 3.9890 REMARK 3 L13: 0.0318 L23: -1.1031 REMARK 3 S TENSOR REMARK 3 S11: -0.0036 S12: -0.3152 S13: 0.1716 REMARK 3 S21: 0.4899 S22: 0.0169 S23: 0.2378 REMARK 3 S31: -0.3460 S32: -0.3150 S33: 0.0119 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 137.3723 22.1625 -2.8139 REMARK 3 T TENSOR REMARK 3 T11: 0.1777 T22: 0.1643 REMARK 3 T33: 0.2066 T12: 0.0447 REMARK 3 T13: -0.0149 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.7892 L22: 2.2654 REMARK 3 L33: 3.7506 L12: -0.3519 REMARK 3 L13: -0.1070 L23: -0.9511 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: 0.1116 S13: 0.0275 REMARK 3 S21: -0.0619 S22: -0.0186 S23: -0.0916 REMARK 3 S31: -0.0838 S32: -0.0485 S33: 0.0143 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MXK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003174. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6-7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18585 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 121.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.14800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 1.41500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 1T56 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 TO 2.1 AMMONIUM SULFATE 0.1M MES REMARK 280 (PH 6 TO 7) 5 TO 15%(V/V) GLYCEROL 7 TO 12%(V/V) 1,4-DIOXANE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.86900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.59950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.59950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.43450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.59950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.59950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.30350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.59950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.59950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 8.43450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.59950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.59950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.30350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.86900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 121.19900 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -121.19900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 415 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 GLN A 8 REMARK 465 ALA A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 PRO A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 THR A 17 REMARK 465 ALA A 18 REMARK 465 ARG A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ASN A 215 REMARK 465 ARG A 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 23 CG OD1 OD2 REMARK 470 ASP A 24 CG OD1 OD2 REMARK 470 ARG A 25 CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 ARG A 159 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 453 O HOH A 475 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 117 54.95 -142.22 REMARK 500 THR A 165 -104.97 -102.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZHA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 DBREF 5MXK A 1 216 UNP P9WMC1 ETHR_MYCTU 1 216 SEQRES 1 A 216 MET THR THR SER ALA ALA SER GLN ALA SER LEU PRO ARG SEQRES 2 A 216 GLY ARG ARG THR ALA ARG PRO SER GLY ASP ASP ARG GLU SEQRES 3 A 216 LEU ALA ILE LEU ALA THR ALA GLU ASN LEU LEU GLU ASP SEQRES 4 A 216 ARG PRO LEU ALA ASP ILE SER VAL ASP ASP LEU ALA LYS SEQRES 5 A 216 GLY ALA GLY ILE SER ARG PRO THR PHE TYR PHE TYR PHE SEQRES 6 A 216 PRO SER LYS GLU ALA VAL LEU LEU THR LEU LEU ASP ARG SEQRES 7 A 216 VAL VAL ASN GLN ALA ASP MET ALA LEU GLN THR LEU ALA SEQRES 8 A 216 GLU ASN PRO ALA ASP THR ASP ARG GLU ASN MET TRP ARG SEQRES 9 A 216 THR GLY ILE ASN VAL PHE PHE GLU THR PHE GLY SER HIS SEQRES 10 A 216 LYS ALA VAL THR ARG ALA GLY GLN ALA ALA ARG ALA THR SEQRES 11 A 216 SER VAL GLU VAL ALA GLU LEU TRP SER THR PHE MET GLN SEQRES 12 A 216 LYS TRP ILE ALA TYR THR ALA ALA VAL ILE ASP ALA GLU SEQRES 13 A 216 ARG ASP ARG GLY ALA ALA PRO ARG THR LEU PRO ALA HIS SEQRES 14 A 216 GLU LEU ALA THR ALA LEU ASN LEU MET ASN GLU ARG THR SEQRES 15 A 216 LEU PHE ALA SER PHE ALA GLY GLU GLN PRO SER VAL PRO SEQRES 16 A 216 GLU ALA ARG VAL LEU ASP THR LEU VAL HIS ILE TRP VAL SEQRES 17 A 216 THR SER ILE TYR GLY GLU ASN ARG HET ZHA A 301 15 HET EDO A 302 4 HET EDO A 303 4 HETNAM ZHA ~{N}-(5-OXIDANYLIDENE-7,8-DIHYDRO-6~{H}-NAPHTHALEN-2- HETNAM 2 ZHA YL)ETHANAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ZHA C12 H13 N O2 FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *81(H2 O) HELIX 1 AA1 GLY A 22 GLU A 38 1 17 HELIX 2 AA2 PRO A 41 ILE A 45 5 5 HELIX 3 AA3 SER A 46 GLY A 55 1 10 HELIX 4 AA4 SER A 57 PHE A 65 1 9 HELIX 5 AA5 SER A 67 ASN A 93 1 27 HELIX 6 AA6 ASP A 98 SER A 116 1 19 HELIX 7 AA7 HIS A 117 ARG A 128 1 12 HELIX 8 AA8 SER A 131 ARG A 159 1 29 HELIX 9 AA9 PRO A 167 GLY A 189 1 23 HELIX 10 AB1 PRO A 195 GLY A 213 1 19 CISPEP 1 GLN A 191 PRO A 192 0 1.40 SITE 1 AC1 9 TRP A 103 GLY A 106 ILE A 107 PHE A 110 SITE 2 AC1 9 TYR A 148 THR A 149 ASN A 176 ASN A 179 SITE 3 AC1 9 TRP A 207 SITE 1 AC2 4 PHE A 111 GLU A 112 GLY A 115 GLU A 196 SITE 1 AC3 2 ASP A 98 ARG A 99 CRYST1 121.199 121.199 33.738 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008251 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008251 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029640 0.00000