HEADER TRANSCRIPTION 27-JAN-17 5MYS TITLE STRUCTURE OF TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN - ETHR FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND GSK920684A AT TITLE 3 1.59A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR ETHR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: ETHR, ETAR, RV3855; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ETHR, MYCOBACTERIUM TUBERCULOSIS, TRANSCRIPTION, REPRESOR EXPDTA X-RAY DIFFRACTION AUTHOR M.BLASZCZYK,V.MENDES,G.MUGUMBATE,T.L.BLUNDELL REVDAT 2 17-JAN-24 5MYS 1 JRNL ATOM REVDAT 1 25-OCT-17 5MYS 0 JRNL AUTH G.MUGUMBATE,V.MENDES,M.BLASZCZYK,M.SABBAH,G.PAPADATOS, JRNL AUTH 2 J.LELIEVRE,L.BALLELL,D.BARROS,C.ABELL,T.L.BLUNDELL, JRNL AUTH 3 J.P.OVERINGTON JRNL TITL TARGET IDENTIFICATION OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 PHENOTYPIC HITS USING A CONCERTED CHEMOGENOMIC, BIOPHYSICAL, JRNL TITL 3 AND STRUCTURAL APPROACH. JRNL REF FRONT PHARMACOL V. 8 681 2017 JRNL REFN ESSN 1663-9812 JRNL PMID 29018348 JRNL DOI 10.3389/FPHAR.2017.00681 REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 34616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 86.0744 - 3.6326 1.00 3001 142 0.1730 0.2273 REMARK 3 2 3.6326 - 2.8832 1.00 2806 158 0.1726 0.2065 REMARK 3 3 2.8832 - 2.5187 1.00 2782 159 0.1731 0.1882 REMARK 3 4 2.5187 - 2.2884 1.00 2767 135 0.1605 0.1869 REMARK 3 5 2.2884 - 2.1244 1.00 2755 132 0.1515 0.1788 REMARK 3 6 2.1244 - 1.9991 1.00 2715 152 0.1589 0.1838 REMARK 3 7 1.9991 - 1.8990 0.99 2732 149 0.1716 0.2004 REMARK 3 8 1.8990 - 1.8163 0.99 2709 155 0.1761 0.2101 REMARK 3 9 1.8163 - 1.7464 0.99 2695 141 0.1885 0.1968 REMARK 3 10 1.7464 - 1.6861 0.99 2661 151 0.2018 0.2477 REMARK 3 11 1.6861 - 1.6334 0.95 2613 142 0.2326 0.2974 REMARK 3 12 1.6334 - 1.5867 0.97 2637 127 0.2492 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1558 REMARK 3 ANGLE : 0.772 2126 REMARK 3 CHIRALITY : 0.047 242 REMARK 3 PLANARITY : 0.005 278 REMARK 3 DIHEDRAL : 14.949 920 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.3154 -20.8402 4.8749 REMARK 3 T TENSOR REMARK 3 T11: 0.2629 T22: 0.5421 REMARK 3 T33: 0.3316 T12: -0.0763 REMARK 3 T13: 0.0097 T23: -0.0461 REMARK 3 L TENSOR REMARK 3 L11: 7.0833 L22: 5.4821 REMARK 3 L33: 4.0723 L12: 0.1103 REMARK 3 L13: 0.7210 L23: -0.5381 REMARK 3 S TENSOR REMARK 3 S11: -0.0578 S12: -0.6622 S13: 0.5534 REMARK 3 S21: 0.1492 S22: -0.0033 S23: 0.0598 REMARK 3 S31: -0.4584 S32: -0.5730 S33: 0.1661 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.7068 -32.1261 8.6348 REMARK 3 T TENSOR REMARK 3 T11: 0.3998 T22: 0.5417 REMARK 3 T33: 0.6100 T12: -0.1282 REMARK 3 T13: -0.0717 T23: 0.1944 REMARK 3 L TENSOR REMARK 3 L11: 4.6780 L22: 5.2483 REMARK 3 L33: 7.4064 L12: 4.0079 REMARK 3 L13: 4.6960 L23: 2.9138 REMARK 3 S TENSOR REMARK 3 S11: 0.4545 S12: -0.8765 S13: -1.2932 REMARK 3 S21: 0.7080 S22: 0.5272 S23: 0.0978 REMARK 3 S31: 0.5021 S32: -0.0968 S33: -0.5597 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -58.8240 -28.5357 1.1418 REMARK 3 T TENSOR REMARK 3 T11: 0.2644 T22: 0.5462 REMARK 3 T33: 0.3692 T12: -0.1844 REMARK 3 T13: -0.0119 T23: -0.0562 REMARK 3 L TENSOR REMARK 3 L11: 5.4268 L22: 1.5413 REMARK 3 L33: 4.0386 L12: 0.9669 REMARK 3 L13: 0.3461 L23: 0.8308 REMARK 3 S TENSOR REMARK 3 S11: 0.2818 S12: -0.3482 S13: -0.4273 REMARK 3 S21: 0.0056 S22: -0.0491 S23: -0.1431 REMARK 3 S31: 0.0222 S32: 0.5192 S33: -0.1833 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.5331 -14.4598 -3.4810 REMARK 3 T TENSOR REMARK 3 T11: 0.1782 T22: 0.4370 REMARK 3 T33: 0.2283 T12: 0.0491 REMARK 3 T13: -0.0268 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 8.0048 L22: 3.8775 REMARK 3 L33: 3.2270 L12: 5.5207 REMARK 3 L13: -1.9895 L23: -0.5661 REMARK 3 S TENSOR REMARK 3 S11: -0.1479 S12: 0.5740 S13: 0.1472 REMARK 3 S21: -0.1659 S22: 0.3020 S23: 0.3447 REMARK 3 S31: -0.1114 S32: -0.9668 S33: -0.1329 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7833 4.0181 -0.2963 REMARK 3 T TENSOR REMARK 3 T11: 0.9012 T22: 0.4641 REMARK 3 T33: 1.2794 T12: 0.0772 REMARK 3 T13: 0.2160 T23: -0.1801 REMARK 3 L TENSOR REMARK 3 L11: 3.9038 L22: 0.5702 REMARK 3 L33: 0.7830 L12: 1.4259 REMARK 3 L13: 1.2645 L23: 0.5903 REMARK 3 S TENSOR REMARK 3 S11: 0.2130 S12: -0.0385 S13: 0.6477 REMARK 3 S21: 0.0876 S22: 0.1025 S23: -0.0429 REMARK 3 S31: -0.8984 S32: -0.2843 S33: -0.2867 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9804 -7.5743 2.7046 REMARK 3 T TENSOR REMARK 3 T11: 0.2490 T22: 0.2181 REMARK 3 T33: 0.2493 T12: 0.0770 REMARK 3 T13: 0.0191 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 7.1839 L22: 4.5967 REMARK 3 L33: 4.7963 L12: 2.0215 REMARK 3 L13: -2.2849 L23: -0.8740 REMARK 3 S TENSOR REMARK 3 S11: 0.2403 S12: -0.0183 S13: 0.7187 REMARK 3 S21: -0.0601 S22: -0.0481 S23: -0.0215 REMARK 3 S31: -0.3773 S32: -0.0480 S33: -0.1068 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.0736 -25.2873 2.0589 REMARK 3 T TENSOR REMARK 3 T11: 0.3006 T22: 0.4399 REMARK 3 T33: 0.4743 T12: -0.0555 REMARK 3 T13: 0.0084 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 3.5303 L22: 2.9595 REMARK 3 L33: 4.6214 L12: 0.2334 REMARK 3 L13: 0.1337 L23: 3.7436 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: -0.0592 S13: -0.7748 REMARK 3 S21: 0.0970 S22: 0.3228 S23: -0.6044 REMARK 3 S31: 0.7079 S32: -0.1128 S33: -0.3848 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.3822 -14.3841 -10.0096 REMARK 3 T TENSOR REMARK 3 T11: 0.2274 T22: 0.2802 REMARK 3 T33: 0.1700 T12: 0.0857 REMARK 3 T13: -0.0099 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 7.2790 L22: 5.5849 REMARK 3 L33: 3.3915 L12: 4.1499 REMARK 3 L13: -0.6150 L23: -0.3781 REMARK 3 S TENSOR REMARK 3 S11: -0.1227 S12: 0.3595 S13: 0.0415 REMARK 3 S21: -0.4366 S22: 0.0238 S23: 0.0742 REMARK 3 S31: -0.1152 S32: -0.5172 S33: 0.0785 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2183 -5.8877 -11.1611 REMARK 3 T TENSOR REMARK 3 T11: 0.3254 T22: 0.2885 REMARK 3 T33: 0.3287 T12: -0.0435 REMARK 3 T13: 0.0766 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 0.6442 L22: 2.0960 REMARK 3 L33: 3.9743 L12: 1.1025 REMARK 3 L13: 0.1214 L23: 0.8410 REMARK 3 S TENSOR REMARK 3 S11: 0.3181 S12: 0.0256 S13: 0.3133 REMARK 3 S21: -0.0359 S22: -0.2841 S23: 0.0901 REMARK 3 S31: -0.5105 S32: 0.5753 S33: 0.0121 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9066 -18.9216 -1.1487 REMARK 3 T TENSOR REMARK 3 T11: 0.1771 T22: 0.1929 REMARK 3 T33: 0.2014 T12: 0.0217 REMARK 3 T13: -0.0059 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.9197 L22: 2.1825 REMARK 3 L33: 6.6210 L12: 0.2721 REMARK 3 L13: -1.6396 L23: -2.2467 REMARK 3 S TENSOR REMARK 3 S11: 0.0406 S12: 0.0300 S13: -0.0097 REMARK 3 S21: -0.0188 S22: 0.1037 S23: 0.1180 REMARK 3 S31: 0.0200 S32: -0.2594 S33: -0.1419 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8888 -24.6293 12.1752 REMARK 3 T TENSOR REMARK 3 T11: 0.2856 T22: 0.2331 REMARK 3 T33: 0.2703 T12: 0.0193 REMARK 3 T13: 0.0360 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.6271 L22: 4.4823 REMARK 3 L33: 6.4589 L12: 0.6673 REMARK 3 L13: -2.5097 L23: 4.0637 REMARK 3 S TENSOR REMARK 3 S11: -0.2847 S12: -0.2663 S13: -0.8524 REMARK 3 S21: 0.2935 S22: 0.1275 S23: -0.5771 REMARK 3 S31: 0.8399 S32: -0.1426 S33: 0.2011 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0139 -10.9592 3.8918 REMARK 3 T TENSOR REMARK 3 T11: 0.2161 T22: 0.1605 REMARK 3 T33: 0.2205 T12: 0.0332 REMARK 3 T13: -0.0012 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 1.9429 L22: 3.0777 REMARK 3 L33: 6.6453 L12: 1.3672 REMARK 3 L13: -1.4509 L23: -2.4014 REMARK 3 S TENSOR REMARK 3 S11: 0.0977 S12: -0.1833 S13: 0.1634 REMARK 3 S21: 0.1575 S22: -0.0036 S23: 0.0370 REMARK 3 S31: -0.3351 S32: 0.0624 S33: -0.1271 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MYS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003275. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH RANGE 6-7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34673 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.587 REMARK 200 RESOLUTION RANGE LOW (A) : 121.549 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 1.14100 REMARK 200 R SYM FOR SHELL (I) : 1.14100 REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0, PHASER REMARK 200 STARTING MODEL: 1T56 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 TO 2.1 AMMONIUM SULFATE 0.1M MES REMARK 280 (PH 6 TO 7) 5 TO 15%(V/V) GLYCEROL 7 TO 12%(V/V) 1,4-DIOXANE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.89500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.77450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.44750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.77450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.34250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.77450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 8.44750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.77450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.34250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.89500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 439 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 498 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -3 REMARK 465 ASP A -2 REMARK 465 ILE A -1 REMARK 465 GLU A 0 REMARK 465 PHE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 GLN A 8 REMARK 465 ALA A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 PRO A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 THR A 17 REMARK 465 ALA A 18 REMARK 465 ARG A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ASN A 215 REMARK 465 ARG A 216 REMARK 465 GLY A 217 REMARK 465 SER A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 GLU A 214 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 451 O HOH A 477 7554 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 165 -103.64 -106.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue YP6 A 301 DBREF 5MYS A 2 216 UNP P9WMC1 ETHR_MYCTU 2 216 SEQADV 5MYS MET A -3 UNP P9WMC1 INITIATING METHIONINE SEQADV 5MYS ASP A -2 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS ILE A -1 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS GLU A 0 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS PHE A 1 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS GLY A 217 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS SER A 218 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS HIS A 219 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS HIS A 220 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS HIS A 221 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS HIS A 222 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS HIS A 223 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYS HIS A 224 UNP P9WMC1 EXPRESSION TAG SEQRES 1 A 228 MET ASP ILE GLU PHE THR THR SER ALA ALA SER GLN ALA SEQRES 2 A 228 SER LEU PRO ARG GLY ARG ARG THR ALA ARG PRO SER GLY SEQRES 3 A 228 ASP ASP ARG GLU LEU ALA ILE LEU ALA THR ALA GLU ASN SEQRES 4 A 228 LEU LEU GLU ASP ARG PRO LEU ALA ASP ILE SER VAL ASP SEQRES 5 A 228 ASP LEU ALA LYS GLY ALA GLY ILE SER ARG PRO THR PHE SEQRES 6 A 228 TYR PHE TYR PHE PRO SER LYS GLU ALA VAL LEU LEU THR SEQRES 7 A 228 LEU LEU ASP ARG VAL VAL ASN GLN ALA ASP MET ALA LEU SEQRES 8 A 228 GLN THR LEU ALA GLU ASN PRO ALA ASP THR ASP ARG GLU SEQRES 9 A 228 ASN MET TRP ARG THR GLY ILE ASN VAL PHE PHE GLU THR SEQRES 10 A 228 PHE GLY SER HIS LYS ALA VAL THR ARG ALA GLY GLN ALA SEQRES 11 A 228 ALA ARG ALA THR SER VAL GLU VAL ALA GLU LEU TRP SER SEQRES 12 A 228 THR PHE MET GLN LYS TRP ILE ALA TYR THR ALA ALA VAL SEQRES 13 A 228 ILE ASP ALA GLU ARG ASP ARG GLY ALA ALA PRO ARG THR SEQRES 14 A 228 LEU PRO ALA HIS GLU LEU ALA THR ALA LEU ASN LEU MET SEQRES 15 A 228 ASN GLU ARG THR LEU PHE ALA SER PHE ALA GLY GLU GLN SEQRES 16 A 228 PRO SER VAL PRO GLU ALA ARG VAL LEU ASP THR LEU VAL SEQRES 17 A 228 HIS ILE TRP VAL THR SER ILE TYR GLY GLU ASN ARG GLY SEQRES 18 A 228 SER HIS HIS HIS HIS HIS HIS HET YP6 A 301 23 HETNAM YP6 2-(3-FLUORANYLPHENOXY)-~{N}-(4-PYRIDIN-2-YL-1,3- HETNAM 2 YP6 THIAZOL-2-YL)ETHANAMIDE FORMUL 2 YP6 C16 H12 F N3 O2 S FORMUL 3 HOH *102(H2 O) HELIX 1 AA1 GLY A 22 GLU A 38 1 17 HELIX 2 AA2 PRO A 41 ILE A 45 5 5 HELIX 3 AA3 SER A 46 GLY A 55 1 10 HELIX 4 AA4 SER A 57 PHE A 65 1 9 HELIX 5 AA5 SER A 67 ASN A 93 1 27 HELIX 6 AA6 ASP A 98 SER A 116 1 19 HELIX 7 AA7 HIS A 117 ARG A 128 1 12 HELIX 8 AA8 SER A 131 ARG A 159 1 29 HELIX 9 AA9 PRO A 167 GLY A 189 1 23 HELIX 10 AB1 PRO A 195 GLY A 213 1 19 CISPEP 1 GLN A 191 PRO A 192 0 2.68 SITE 1 AC1 14 MET A 102 TRP A 103 GLY A 106 PHE A 110 SITE 2 AC1 14 TRP A 138 MET A 142 TRP A 145 TYR A 148 SITE 3 AC1 14 THR A 149 ASN A 176 ASN A 179 LEU A 183 SITE 4 AC1 14 PHE A 184 TRP A 207 CRYST1 121.549 121.549 33.790 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008227 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029595 0.00000