HEADER TRANSCRIPTION 30-JAN-17 5MYW TITLE STRUCTURE OF TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN - ETHR FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND SB-435634 AT TITLE 3 1.77A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR ETHR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: ETHR, ETAR, RV3855; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ETHR, MYCOBACTERIUM TUBERCULOSIS, TRANSCRIPTION, REPRESOR EXPDTA X-RAY DIFFRACTION AUTHOR M.BLASZCZYK,V.MENDES,G.MUGUMBATE,T.L.BLUNDELL REVDAT 2 17-JAN-24 5MYW 1 JRNL REMARK REVDAT 1 25-OCT-17 5MYW 0 JRNL AUTH G.MUGUMBATE,V.MENDES,M.BLASZCZYK,M.SABBAH,G.PAPADATOS, JRNL AUTH 2 J.LELIEVRE,L.BALLELL,D.BARROS,C.ABELL,T.L.BLUNDELL, JRNL AUTH 3 J.P.OVERINGTON JRNL TITL TARGET IDENTIFICATION OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 PHENOTYPIC HITS USING A CONCERTED CHEMOGENOMIC, BIOPHYSICAL, JRNL TITL 3 AND STRUCTURAL APPROACH. JRNL REF FRONT PHARMACOL V. 8 681 2017 JRNL REFN ESSN 1663-9812 JRNL PMID 29018348 JRNL DOI 10.3389/FPHAR.2017.00681 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 25300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1291 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7119 - 3.6768 1.00 2879 150 0.1625 0.1623 REMARK 3 2 3.6768 - 2.9189 1.00 2750 121 0.1760 0.2101 REMARK 3 3 2.9189 - 2.5501 1.00 2685 142 0.1828 0.2194 REMARK 3 4 2.5501 - 2.3170 1.00 2654 147 0.1720 0.2128 REMARK 3 5 2.3170 - 2.1510 1.00 2637 150 0.1746 0.1876 REMARK 3 6 2.1510 - 2.0242 1.00 2636 123 0.1787 0.2372 REMARK 3 7 2.0242 - 1.9228 0.99 2626 135 0.2028 0.2435 REMARK 3 8 1.9228 - 1.8391 0.99 2584 150 0.2377 0.2820 REMARK 3 9 1.8391 - 1.7683 0.99 2558 173 0.2631 0.2850 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1533 REMARK 3 ANGLE : 0.761 2093 REMARK 3 CHIRALITY : 0.047 241 REMARK 3 PLANARITY : 0.006 271 REMARK 3 DIHEDRAL : 13.265 904 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8293 -50.5238 -6.2868 REMARK 3 T TENSOR REMARK 3 T11: 0.5838 T22: 0.3853 REMARK 3 T33: 0.4281 T12: -0.1453 REMARK 3 T13: -0.0615 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 7.4163 L22: 9.3175 REMARK 3 L33: 2.1787 L12: -4.7372 REMARK 3 L13: 1.5373 L23: -3.7665 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: 0.5595 S13: -0.3620 REMARK 3 S21: -1.1506 S22: 0.0886 S23: 0.7013 REMARK 3 S31: 0.3711 S32: -0.0514 S33: -0.0244 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6625 -58.5687 -1.1711 REMARK 3 T TENSOR REMARK 3 T11: 0.6173 T22: 0.3305 REMARK 3 T33: 0.4575 T12: -0.1954 REMARK 3 T13: 0.0651 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 3.2285 L22: 7.0892 REMARK 3 L33: 5.8847 L12: 1.5811 REMARK 3 L13: -2.3699 L23: -0.0448 REMARK 3 S TENSOR REMARK 3 S11: -0.1191 S12: 0.1937 S13: 0.4784 REMARK 3 S21: -0.2718 S22: 0.2909 S23: 0.8747 REMARK 3 S31: -0.8087 S32: 0.2044 S33: -0.2463 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6134 -41.5724 3.3181 REMARK 3 T TENSOR REMARK 3 T11: 0.5361 T22: 0.2546 REMARK 3 T33: 0.3548 T12: 0.0436 REMARK 3 T13: 0.0145 T23: 0.0463 REMARK 3 L TENSOR REMARK 3 L11: 4.3241 L22: 7.9398 REMARK 3 L33: 3.5544 L12: 5.8871 REMARK 3 L13: 2.6531 L23: 3.5406 REMARK 3 S TENSOR REMARK 3 S11: 0.6142 S12: -0.1423 S13: -0.1056 REMARK 3 S21: 0.9280 S22: -0.3393 S23: 0.0812 REMARK 3 S31: 0.9920 S32: 0.0119 S33: -0.3300 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4298 -26.5880 0.4953 REMARK 3 T TENSOR REMARK 3 T11: 0.7074 T22: 1.0971 REMARK 3 T33: 1.7034 T12: -0.0067 REMARK 3 T13: 0.4113 T23: -0.0369 REMARK 3 L TENSOR REMARK 3 L11: 0.4472 L22: 6.9005 REMARK 3 L33: 1.3773 L12: 1.3721 REMARK 3 L13: 0.3163 L23: -0.7939 REMARK 3 S TENSOR REMARK 3 S11: 0.7287 S12: -0.4410 S13: 0.7495 REMARK 3 S21: 0.1812 S22: 0.1802 S23: -0.8366 REMARK 3 S31: -0.5527 S32: 1.1194 S33: -0.6857 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6845 -31.6523 -3.1081 REMARK 3 T TENSOR REMARK 3 T11: 0.3326 T22: 0.1898 REMARK 3 T33: 0.2065 T12: 0.0612 REMARK 3 T13: 0.0053 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 8.9837 L22: 7.7767 REMARK 3 L33: 3.6396 L12: 3.3221 REMARK 3 L13: 0.1287 L23: 1.7692 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: 0.1777 S13: 0.1335 REMARK 3 S21: -0.0180 S22: 0.1751 S23: 0.0426 REMARK 3 S31: 0.3653 S32: 0.0723 S33: -0.1536 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2451 -26.0335 9.8875 REMARK 3 T TENSOR REMARK 3 T11: 0.2637 T22: 0.2473 REMARK 3 T33: 0.1882 T12: 0.1093 REMARK 3 T13: 0.0142 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 4.3534 L22: 9.6050 REMARK 3 L33: 4.2006 L12: 3.9987 REMARK 3 L13: -0.1552 L23: 1.1077 REMARK 3 S TENSOR REMARK 3 S11: -0.0650 S12: -0.3829 S13: -0.2155 REMARK 3 S21: 0.4260 S22: -0.0506 S23: -0.1577 REMARK 3 S31: 0.4093 S32: 0.1865 S33: 0.0903 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1442 -22.2306 -2.7567 REMARK 3 T TENSOR REMARK 3 T11: 0.2323 T22: 0.2420 REMARK 3 T33: 0.2479 T12: 0.0757 REMARK 3 T13: 0.0022 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.8848 L22: 2.7281 REMARK 3 L33: 5.2407 L12: 0.4003 REMARK 3 L13: 1.1526 L23: 0.8005 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: 0.1671 S13: -0.0710 REMARK 3 S21: -0.1148 S22: -0.0584 S23: 0.0476 REMARK 3 S31: 0.2340 S32: -0.0537 S33: -0.0044 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MYW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH RANGE 6-7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25356 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 60.764 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : 1.34000 REMARK 200 R SYM FOR SHELL (I) : 1.34000 REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1T56 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 TO 2.1 AMMONIUM SULFATE 0.1M MES REMARK 280 (PH 6 TO 7) 5 TO 15%(V/V) GLYCEROL 7 TO 12%(V/V) 1,4-DIOXANE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.87900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.76400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.76400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.43950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.76400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.76400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.31850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.76400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.76400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 8.43950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.76400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.76400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.31850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.87900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 422 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -3 REMARK 465 ASP A -2 REMARK 465 ILE A -1 REMARK 465 GLU A 0 REMARK 465 PHE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 GLN A 8 REMARK 465 ALA A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 PRO A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 THR A 17 REMARK 465 ALA A 18 REMARK 465 ARG A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ASN A 215 REMARK 465 ARG A 216 REMARK 465 GLY A 217 REMARK 465 SER A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 23 CG OD1 OD2 REMARK 470 ARG A 25 CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 GLU A 214 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 165 -104.83 -106.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WCU A 301 DBREF 5MYW A 2 216 UNP P9WMC1 ETHR_MYCTU 2 216 SEQADV 5MYW MET A -3 UNP P9WMC1 INITIATING METHIONINE SEQADV 5MYW ASP A -2 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW ILE A -1 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW GLU A 0 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW PHE A 1 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW GLY A 217 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW SER A 218 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW HIS A 219 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW HIS A 220 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW HIS A 221 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW HIS A 222 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW HIS A 223 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYW HIS A 224 UNP P9WMC1 EXPRESSION TAG SEQRES 1 A 228 MET ASP ILE GLU PHE THR THR SER ALA ALA SER GLN ALA SEQRES 2 A 228 SER LEU PRO ARG GLY ARG ARG THR ALA ARG PRO SER GLY SEQRES 3 A 228 ASP ASP ARG GLU LEU ALA ILE LEU ALA THR ALA GLU ASN SEQRES 4 A 228 LEU LEU GLU ASP ARG PRO LEU ALA ASP ILE SER VAL ASP SEQRES 5 A 228 ASP LEU ALA LYS GLY ALA GLY ILE SER ARG PRO THR PHE SEQRES 6 A 228 TYR PHE TYR PHE PRO SER LYS GLU ALA VAL LEU LEU THR SEQRES 7 A 228 LEU LEU ASP ARG VAL VAL ASN GLN ALA ASP MET ALA LEU SEQRES 8 A 228 GLN THR LEU ALA GLU ASN PRO ALA ASP THR ASP ARG GLU SEQRES 9 A 228 ASN MET TRP ARG THR GLY ILE ASN VAL PHE PHE GLU THR SEQRES 10 A 228 PHE GLY SER HIS LYS ALA VAL THR ARG ALA GLY GLN ALA SEQRES 11 A 228 ALA ARG ALA THR SER VAL GLU VAL ALA GLU LEU TRP SER SEQRES 12 A 228 THR PHE MET GLN LYS TRP ILE ALA TYR THR ALA ALA VAL SEQRES 13 A 228 ILE ASP ALA GLU ARG ASP ARG GLY ALA ALA PRO ARG THR SEQRES 14 A 228 LEU PRO ALA HIS GLU LEU ALA THR ALA LEU ASN LEU MET SEQRES 15 A 228 ASN GLU ARG THR LEU PHE ALA SER PHE ALA GLY GLU GLN SEQRES 16 A 228 PRO SER VAL PRO GLU ALA ARG VAL LEU ASP THR LEU VAL SEQRES 17 A 228 HIS ILE TRP VAL THR SER ILE TYR GLY GLU ASN ARG GLY SEQRES 18 A 228 SER HIS HIS HIS HIS HIS HIS HET WCU A 301 17 HETNAM WCU ~{N}2-(1,3-BENZODIOXOL-5-YL)BENZENE-1,2-DIAMINE FORMUL 2 WCU C13 H12 N2 O2 FORMUL 3 HOH *66(H2 O) HELIX 1 AA1 GLY A 22 GLU A 38 1 17 HELIX 2 AA2 PRO A 41 ILE A 45 5 5 HELIX 3 AA3 SER A 46 ALA A 54 1 9 HELIX 4 AA4 SER A 57 PHE A 65 1 9 HELIX 5 AA5 SER A 67 ASN A 93 1 27 HELIX 6 AA6 ASP A 98 SER A 116 1 19 HELIX 7 AA7 HIS A 117 SER A 131 1 15 HELIX 8 AA8 SER A 131 ARG A 159 1 29 HELIX 9 AA9 PRO A 167 GLY A 189 1 23 HELIX 10 AB1 PRO A 195 GLY A 213 1 19 CISPEP 1 GLN A 191 PRO A 192 0 3.54 SITE 1 AC1 7 MET A 102 TRP A 103 PHE A 110 TYR A 148 SITE 2 AC1 7 THR A 149 ASN A 176 TRP A 207 CRYST1 121.528 121.528 33.758 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008229 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008229 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029623 0.00000