HEADER    TRANSCRIPTION                           04-FEB-17   5N13              
TITLE     SECOND BROMODOMAIN (BD2) FROM CANDIDA ALBICANS BDF1 IN THE UNBOUND    
TITLE    2 FORM                                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: BROMODOMAIN-CONTAINING FACTOR 1;                           
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS;                               
SOURCE   3 ORGANISM_COMMON: YEAST;                                              
SOURCE   4 ORGANISM_TAXID: 5476;                                                
SOURCE   5 GENE: BDF1, CAO19.8593, CAO19.978;                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    BROMODOMAIN, TRANSCRIPTION                                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    F.MIETTON,E.FERRI,M.CHAMPLEBOUXM,N.ZALA,D.MAUBON,Y.ZHOU,M.HARBUT,     
AUTHOR   2 D.SPITTLER,C.GARNAUD,M.COURCON,M.CHAUVEL,C.D'ENFERT,B.A.KASHEMIROV,  
AUTHOR   3 M.HULL,M.CORNET,C.E.MCKENNA,J.GOVIN,C.PETOSA                         
REVDAT   3   17-JAN-24 5N13    1       REMARK                                   
REVDAT   2   06-SEP-17 5N13    1       REMARK                                   
REVDAT   1   31-MAY-17 5N13    0                                                
JRNL        AUTH   F.MIETTON,E.FERRI,M.CHAMPLEBOUX,N.ZALA,D.MAUBON,Y.ZHOU,      
JRNL        AUTH 2 M.HARBUT,D.SPITTLER,C.GARNAUD,M.COURCON,M.CHAUVEL,           
JRNL        AUTH 3 C.D'ENFERT,B.A.KASHEMIROV,M.HULL,M.CORNET,C.E.MCKENNA,       
JRNL        AUTH 4 J.GOVIN,C.PETOSA                                             
JRNL        TITL   SELECTIVE BET BROMODOMAIN INHIBITION AS AN ANTIFUNGAL        
JRNL        TITL 2 THERAPEUTIC STRATEGY.                                        
JRNL        REF    NAT COMMUN                    V.   8 15482 2017              
JRNL        REFN                   ESSN 2041-1723                               
JRNL        PMID   28516956                                                     
JRNL        DOI    10.1038/NCOMMS15482                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.20 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (1.10_2155)                                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 38.25                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 97.9                           
REMARK   3   NUMBER OF REFLECTIONS             : 39353                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.143                           
REMARK   3   R VALUE            (WORKING SET) : 0.143                           
REMARK   3   FREE R VALUE                     : 0.156                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.030                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1980                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 38.2725 -  2.8918    1.00     2910   162  0.1700 0.1676        
REMARK   3     2  2.8918 -  2.2954    1.00     2781   143  0.1603 0.1717        
REMARK   3     3  2.2954 -  2.0053    1.00     2791   134  0.1338 0.1601        
REMARK   3     4  2.0053 -  1.8219    1.00     2690   167  0.1327 0.1412        
REMARK   3     5  1.8219 -  1.6913    1.00     2715   147  0.1225 0.1366        
REMARK   3     6  1.6913 -  1.5916    1.00     2727   159  0.1057 0.1197        
REMARK   3     7  1.5916 -  1.5119    1.00     2701   123  0.1042 0.1394        
REMARK   3     8  1.5119 -  1.4461    1.00     2727   130  0.1052 0.1441        
REMARK   3     9  1.4461 -  1.3904    1.00     2666   155  0.1160 0.1252        
REMARK   3    10  1.3904 -  1.3424    1.00     2683   161  0.1188 0.1645        
REMARK   3    11  1.3424 -  1.3005    1.00     2683   137  0.1215 0.1503        
REMARK   3    12  1.3005 -  1.2633    0.98     2628   126  0.1381 0.1408        
REMARK   3    13  1.2633 -  1.2300    0.91     2467   127  0.1450 0.1822        
REMARK   3    14  1.2300 -  1.2000    0.82     2204   109  0.1737 0.2286        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.10                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.080            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.310           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.004            907                                  
REMARK   3   ANGLE     :  0.763           1222                                  
REMARK   3   CHIRALITY :  0.073            128                                  
REMARK   3   PLANARITY :  0.006            160                                  
REMARK   3   DIHEDRAL  : 11.710            339                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5N13 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-FEB-17.                  
REMARK 100 THE DEPOSITION ID IS D_1200003389.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 26-JUL-13                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID29                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9724                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : PSI PILATUS 6M                     
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 39415                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.200                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 45.200                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.9                               
REMARK 200  DATA REDUNDANCY                : 5.800                              
REMARK 200  R MERGE                    (I) : 0.05000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.24                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 83.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.90                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.26300                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 2OUO                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 50.62                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL (PH 8.5) AND 1 M          
REMARK 280  AMMONIUM PHOSPHATE., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE     
REMARK 280  277K                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       19.37700            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       35.91400            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       22.59800            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       35.91400            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       19.37700            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       22.59800            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 550 ANGSTROM**2                           
REMARK 350 SURFACE AREA OF THE COMPLEX: 6410 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ASN A   491                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   669     O    HOH A   756              2.10            
REMARK 500   OE1  GLU A   454     O    HOH A   601              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A 791        DISTANCE =  5.82 ANGSTROMS                       
REMARK 525    HOH A 792        DISTANCE =  6.67 ANGSTROMS                       
REMARK 525    HOH A 793        DISTANCE =  6.98 ANGSTROMS                       
REMARK 525    HOH A 794        DISTANCE =  7.95 ANGSTROMS                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502                 
DBREF  5N13 A  386   491  UNP    Q5A4W8   BDF1_CANAL     386    491             
SEQADV 5N13 ALA A  383  UNP  Q5A4W8              EXPRESSION TAG                 
SEQADV 5N13 MET A  384  UNP  Q5A4W8              EXPRESSION TAG                 
SEQADV 5N13 GLY A  385  UNP  Q5A4W8              EXPRESSION TAG                 
SEQRES   1 A  109  ALA MET GLY ALA ALA GLU LEU ARG PHE CYS ASN GLN THR          
SEQRES   2 A  109  ILE LYS GLU LEU MET SER LYS LYS HIS TYR ASN TYR ASN          
SEQRES   3 A  109  PHE PRO PHE LEU ALA PRO VAL ASP THR VAL ALA LEU ASN          
SEQRES   4 A  109  ILE PRO ASN TYR ASN GLU ILE VAL LYS GLN PRO MET ASP          
SEQRES   5 A  109  LEU GLY THR ILE GLN SER LYS LEU ALA ASN ASN GLU TYR          
SEQRES   6 A  109  GLU ASN ALA ASP ASP PHE GLU LYS ASP VAL ARG LEU VAL          
SEQRES   7 A  109  PHE LYS ASN CYS TYR LEU PHE ASN PRO GLU GLY THR ASP          
SEQRES   8 A  109  VAL ASN MET MET GLY HIS ARG LEU GLU ALA VAL PHE ASP          
SEQRES   9 A  109  LYS LYS TRP ALA ASN                                          
HET    GOL  A 501       6                                                       
HET    GOL  A 502       6                                                       
HETNAM     GOL GLYCEROL                                                         
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   2  GOL    2(C3 H8 O3)                                                  
FORMUL   4  HOH   *194(H2 O)                                                    
HELIX    1 AA1 GLY A  385  SER A  401  1                                  17    
HELIX    2 AA2 HIS A  404  PHE A  409  1                                   6    
HELIX    3 AA3 PRO A  410  LEU A  412  5                                   3    
HELIX    4 AA4 ASN A  424  VAL A  429  1                                   6    
HELIX    5 AA5 ASP A  434  ASN A  444  1                                  11    
HELIX    6 AA6 ASN A  449  ASN A  468  1                                  20    
HELIX    7 AA7 THR A  472  ALA A  490  1                                  19    
SITE     1 AC1  9 PHE A 411  ASN A 463  CYS A 464  PHE A 467                    
SITE     2 AC1  9 ASN A 468  HOH A 604  HOH A 607  HOH A 637                    
SITE     3 AC1  9 HOH A 654                                                     
SITE     1 AC2 10 PHE A 409  PRO A 410  LEU A 412  ALA A 413                    
SITE     2 AC2 10 PRO A 414  ASP A 416  GLU A 446  HOH A 641                    
SITE     3 AC2 10 HOH A 674  HOH A 717                                          
CRYST1   38.754   45.196   71.828  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.025804  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.022126  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013922        0.00000