HEADER TRANSCRIPTION 05-FEB-17 5N16 TITLE FIRST BROMODOMAIN (BD1) FROM CANDIDA ALBICANS BDF1 BOUND TO A TITLE 2 DIBENZOTHIAZEPINONE (COMPOUND 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING FACTOR 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 GENE: BDF1, CAO19.8593, CAO19.978; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BROMODOMAIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR F.MIETTON,E.FERRI,M.CHAMPLEBOUX,N.ZALA,D.MAUBON,Y.ZHOU,M.HARBUT, AUTHOR 2 D.SPITTLER,C.GARNAUD,M.COURCON,M.CHAUVEL,C.D'ENFERT,B.A.KASHEMIROV, AUTHOR 3 M.HULL,M.CORNET,C.E.MCKENNA,J.GOVIN,C.PETOSA REVDAT 4 17-JAN-24 5N16 1 LINK REVDAT 3 06-SEP-17 5N16 1 ATOM REVDAT 2 07-JUN-17 5N16 1 REMARK REVDAT 1 31-MAY-17 5N16 0 JRNL AUTH F.MIETTON,E.FERRI,M.CHAMPLEBOUX,N.ZALA,D.MAUBON,Y.ZHOU, JRNL AUTH 2 M.HARBUT,D.SPITTLER,C.GARNAUD,M.COURCON,M.CHAUVEL, JRNL AUTH 3 C.D'ENFERT,B.A.KASHEMIROV,M.HULL,M.CORNET,C.E.MCKENNA, JRNL AUTH 4 J.GOVIN,C.PETOSA JRNL TITL SELECTIVE BET BROMODOMAIN INHIBITION AS AN ANTIFUNGAL JRNL TITL 2 THERAPEUTIC STRATEGY. JRNL REF NAT COMMUN V. 8 15482 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28516956 JRNL DOI 10.1038/NCOMMS15482 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 59849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 3040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7529 - 4.9292 0.99 2750 147 0.1834 0.1921 REMARK 3 2 4.9292 - 3.9133 1.00 2670 137 0.1546 0.1785 REMARK 3 3 3.9133 - 3.4189 0.99 2608 153 0.1613 0.1982 REMARK 3 4 3.4189 - 3.1064 1.00 2600 137 0.1675 0.2156 REMARK 3 5 3.1064 - 2.8838 1.00 2619 139 0.1825 0.2081 REMARK 3 6 2.8838 - 2.7138 1.00 2559 161 0.1757 0.2209 REMARK 3 7 2.7138 - 2.5779 0.99 2575 141 0.1731 0.1968 REMARK 3 8 2.5779 - 2.4657 1.00 2609 112 0.1774 0.2227 REMARK 3 9 2.4657 - 2.3708 1.00 2593 132 0.1837 0.2156 REMARK 3 10 2.3708 - 2.2890 1.00 2563 134 0.1789 0.2087 REMARK 3 11 2.2890 - 2.2174 1.00 2554 147 0.1796 0.2534 REMARK 3 12 2.2174 - 2.1541 1.00 2546 144 0.1751 0.2392 REMARK 3 13 2.1541 - 2.0974 1.00 2556 153 0.1747 0.2220 REMARK 3 14 2.0974 - 2.0462 1.00 2580 122 0.1863 0.2177 REMARK 3 15 2.0462 - 1.9997 1.00 2592 120 0.1916 0.2249 REMARK 3 16 1.9997 - 1.9571 0.99 2542 151 0.1945 0.2394 REMARK 3 17 1.9571 - 1.9180 1.00 2572 140 0.1956 0.2417 REMARK 3 18 1.9180 - 1.8818 1.00 2572 110 0.1889 0.2659 REMARK 3 19 1.8818 - 1.8482 1.00 2546 155 0.2085 0.2451 REMARK 3 20 1.8482 - 1.8168 1.00 2544 149 0.2185 0.3018 REMARK 3 21 1.8168 - 1.7875 0.99 2535 117 0.2586 0.2820 REMARK 3 22 1.7875 - 1.7600 0.99 2524 139 0.2985 0.3604 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4356 REMARK 3 ANGLE : 0.979 5920 REMARK 3 CHIRALITY : 0.045 632 REMARK 3 PLANARITY : 0.006 781 REMARK 3 DIHEDRAL : 13.213 2709 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9650 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59921 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 54.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.62600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5N15 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE OBTAINED BY MIXING A REMARK 280 SOLUTION OF 20 MG/ML PROTEIN AND 0.4 MM INHIBITOR WITH 0.1 M REMARK 280 TRIS-HCL (PH 8.5), 23% (W/V) PEG MME 2000 AND 10 MM NICL2., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.71750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.29650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.64600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.29650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.71750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.64600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 PRO A 321 REMARK 465 ALA A 322 REMARK 465 GLY A 323 REMARK 465 THR A 324 REMARK 465 ASN A 325 REMARK 465 VAL A 326 REMARK 465 ALA A 327 REMARK 465 ALA B 190 REMARK 465 ALA B 191 REMARK 465 LEU B 320 REMARK 465 PRO B 321 REMARK 465 ALA B 322 REMARK 465 GLY B 323 REMARK 465 THR B 324 REMARK 465 ASN B 325 REMARK 465 VAL B 326 REMARK 465 ALA B 327 REMARK 465 ALA C 190 REMARK 465 ALA C 191 REMARK 465 PRO C 321 REMARK 465 ALA C 322 REMARK 465 GLY C 323 REMARK 465 THR C 324 REMARK 465 ASN C 325 REMARK 465 VAL C 326 REMARK 465 ALA C 327 REMARK 465 ALA D 190 REMARK 465 ALA D 191 REMARK 465 PRO D 321 REMARK 465 ALA D 322 REMARK 465 GLY D 323 REMARK 465 THR D 324 REMARK 465 ASN D 325 REMARK 465 VAL D 326 REMARK 465 ALA D 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 319 CG CD OE1 OE2 REMARK 470 LEU A 320 CB CG CD1 CD2 REMARK 470 ARG B 229 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 220 O HOH B 501 2.05 REMARK 500 O HOH D 593 O HOH D 600 2.06 REMARK 500 O HOH C 607 O HOH C 614 2.07 REMARK 500 O HOH D 526 O HOH D 668 2.08 REMARK 500 O HOH D 548 O HOH D 568 2.08 REMARK 500 O HOH C 590 O HOH C 627 2.09 REMARK 500 O HOH B 628 O HOH B 638 2.10 REMARK 500 O HOH D 644 O HOH D 662 2.10 REMARK 500 O HOH A 545 O HOH D 640 2.12 REMARK 500 O HOH D 622 O HOH D 633 2.12 REMARK 500 O HOH A 631 O HOH B 634 2.12 REMARK 500 O HOH C 564 O HOH C 600 2.12 REMARK 500 O HOH C 505 O HOH C 626 2.12 REMARK 500 O HOH A 579 O HOH A 661 2.14 REMARK 500 O HOH A 517 O HOH A 625 2.14 REMARK 500 O HOH D 589 O HOH D 634 2.15 REMARK 500 O HOH C 545 O HOH C 596 2.15 REMARK 500 O HOH B 549 O HOH B 656 2.16 REMARK 500 O HOH B 526 O HOH B 622 2.17 REMARK 500 O HOH C 538 O HOH C 593 2.17 REMARK 500 O HOH A 537 O HOH A 633 2.18 REMARK 500 O HOH A 595 O HOH A 639 2.18 REMARK 500 O HOH B 505 O HOH B 651 2.18 REMARK 500 O HOH B 530 O HOH B 645 2.19 REMARK 500 O HOH A 527 O HOH A 620 2.19 REMARK 500 O HOH A 628 O HOH A 656 2.19 REMARK 500 O HOH B 608 O HOH B 668 2.19 REMARK 500 O HOH B 536 O HOH B 603 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 637 O HOH D 653 3555 2.13 REMARK 500 O HOH A 542 O HOH A 660 4555 2.14 REMARK 500 O HOH B 566 O HOH D 640 1565 2.15 REMARK 500 O HOH B 533 O HOH D 618 1565 2.16 REMARK 500 O HOH B 644 O HOH D 501 4455 2.17 REMARK 500 O HOH B 625 O HOH D 606 4455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE B 252 79.05 -119.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 665 DISTANCE = 7.18 ANGSTROMS REMARK 525 HOH D 673 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH D 674 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH D 675 DISTANCE = 6.48 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 192 N REMARK 620 2 HOH A 542 O 85.6 REMARK 620 3 HOH A 621 O 129.3 145.0 REMARK 620 4 HOH A 640 O 159.8 74.3 70.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 192 N REMARK 620 2 HOH B 505 O 73.6 REMARK 620 3 HOH B 542 O 106.1 173.5 REMARK 620 4 HOH B 651 O 134.1 60.5 119.6 REMARK 620 5 HOH B 667 O 169.9 116.4 64.2 55.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY C 192 N REMARK 620 2 HOH C 505 O 77.3 REMARK 620 3 HOH C 607 O 152.2 125.1 REMARK 620 4 HOH C 614 O 145.7 68.7 58.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI D 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY D 192 N REMARK 620 2 HOH D 526 O 80.0 REMARK 620 3 HOH D 644 O 141.5 138.2 REMARK 620 4 HOH D 662 O 163.4 83.6 55.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8FN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8FN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8FN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues GOL C 402 and 8FN D REMARK 800 401 DBREF 5N16 A 193 327 UNP Q5A4W8 BDF1_CANAL 193 327 DBREF 5N16 B 193 327 UNP Q5A4W8 BDF1_CANAL 193 327 DBREF 5N16 C 193 327 UNP Q5A4W8 BDF1_CANAL 193 327 DBREF 5N16 D 193 327 UNP Q5A4W8 BDF1_CANAL 193 327 SEQADV 5N16 ALA A 190 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA A 191 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 GLY A 192 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA B 190 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA B 191 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 GLY B 192 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA C 190 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA C 191 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 GLY C 192 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA D 190 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 ALA D 191 UNP Q5A4W8 EXPRESSION TAG SEQADV 5N16 GLY D 192 UNP Q5A4W8 EXPRESSION TAG SEQRES 1 A 138 ALA ALA GLY ALA PRO LYS PRO PRO GLN GLU PRO ASP MET SEQRES 2 A 138 ASN ASN LEU PRO GLU ASN PRO ILE PRO GLN HIS GLN ALA SEQRES 3 A 138 LYS PHE VAL LEU ASN THR ILE LYS ALA VAL LYS ARG ASN SEQRES 4 A 138 ARG GLU ALA VAL PRO PHE LEU HIS PRO VAL ASP THR VAL SEQRES 5 A 138 LYS LEU ASN VAL PRO PHE TYR TYR ASN TYR ILE PRO ARG SEQRES 6 A 138 PRO MET ASP LEU SER THR ILE GLU ARG LYS ILE ASN LEU SEQRES 7 A 138 LYS ALA TYR GLU ASP VAL SER GLN VAL VAL ASP ASP PHE SEQRES 8 A 138 ASN LEU MET VAL LYS ASN CYS LYS LYS PHE ASN GLY GLU SEQRES 9 A 138 ALA ALA GLY ILE SER LYS MET ALA THR ASN ILE GLN ALA SEQRES 10 A 138 GLN PHE GLU LYS LEU MET VAL LYS VAL PRO PRO LYS GLU SEQRES 11 A 138 LEU PRO ALA GLY THR ASN VAL ALA SEQRES 1 B 138 ALA ALA GLY ALA PRO LYS PRO PRO GLN GLU PRO ASP MET SEQRES 2 B 138 ASN ASN LEU PRO GLU ASN PRO ILE PRO GLN HIS GLN ALA SEQRES 3 B 138 LYS PHE VAL LEU ASN THR ILE LYS ALA VAL LYS ARG ASN SEQRES 4 B 138 ARG GLU ALA VAL PRO PHE LEU HIS PRO VAL ASP THR VAL SEQRES 5 B 138 LYS LEU ASN VAL PRO PHE TYR TYR ASN TYR ILE PRO ARG SEQRES 6 B 138 PRO MET ASP LEU SER THR ILE GLU ARG LYS ILE ASN LEU SEQRES 7 B 138 LYS ALA TYR GLU ASP VAL SER GLN VAL VAL ASP ASP PHE SEQRES 8 B 138 ASN LEU MET VAL LYS ASN CYS LYS LYS PHE ASN GLY GLU SEQRES 9 B 138 ALA ALA GLY ILE SER LYS MET ALA THR ASN ILE GLN ALA SEQRES 10 B 138 GLN PHE GLU LYS LEU MET VAL LYS VAL PRO PRO LYS GLU SEQRES 11 B 138 LEU PRO ALA GLY THR ASN VAL ALA SEQRES 1 C 138 ALA ALA GLY ALA PRO LYS PRO PRO GLN GLU PRO ASP MET SEQRES 2 C 138 ASN ASN LEU PRO GLU ASN PRO ILE PRO GLN HIS GLN ALA SEQRES 3 C 138 LYS PHE VAL LEU ASN THR ILE LYS ALA VAL LYS ARG ASN SEQRES 4 C 138 ARG GLU ALA VAL PRO PHE LEU HIS PRO VAL ASP THR VAL SEQRES 5 C 138 LYS LEU ASN VAL PRO PHE TYR TYR ASN TYR ILE PRO ARG SEQRES 6 C 138 PRO MET ASP LEU SER THR ILE GLU ARG LYS ILE ASN LEU SEQRES 7 C 138 LYS ALA TYR GLU ASP VAL SER GLN VAL VAL ASP ASP PHE SEQRES 8 C 138 ASN LEU MET VAL LYS ASN CYS LYS LYS PHE ASN GLY GLU SEQRES 9 C 138 ALA ALA GLY ILE SER LYS MET ALA THR ASN ILE GLN ALA SEQRES 10 C 138 GLN PHE GLU LYS LEU MET VAL LYS VAL PRO PRO LYS GLU SEQRES 11 C 138 LEU PRO ALA GLY THR ASN VAL ALA SEQRES 1 D 138 ALA ALA GLY ALA PRO LYS PRO PRO GLN GLU PRO ASP MET SEQRES 2 D 138 ASN ASN LEU PRO GLU ASN PRO ILE PRO GLN HIS GLN ALA SEQRES 3 D 138 LYS PHE VAL LEU ASN THR ILE LYS ALA VAL LYS ARG ASN SEQRES 4 D 138 ARG GLU ALA VAL PRO PHE LEU HIS PRO VAL ASP THR VAL SEQRES 5 D 138 LYS LEU ASN VAL PRO PHE TYR TYR ASN TYR ILE PRO ARG SEQRES 6 D 138 PRO MET ASP LEU SER THR ILE GLU ARG LYS ILE ASN LEU SEQRES 7 D 138 LYS ALA TYR GLU ASP VAL SER GLN VAL VAL ASP ASP PHE SEQRES 8 D 138 ASN LEU MET VAL LYS ASN CYS LYS LYS PHE ASN GLY GLU SEQRES 9 D 138 ALA ALA GLY ILE SER LYS MET ALA THR ASN ILE GLN ALA SEQRES 10 D 138 GLN PHE GLU LYS LEU MET VAL LYS VAL PRO PRO LYS GLU SEQRES 11 D 138 LEU PRO ALA GLY THR ASN VAL ALA HET 8FN A 401 30 HET NI A 402 1 HET NI A 403 1 HET 8FN A 404 30 HET NI B 401 1 HET 8FN C 401 30 HET GOL C 402 6 HET NI C 403 1 HET 8FN D 401 30 HET NI D 402 1 HETNAM 8FN 5-CYCLOPROPYL-2-(5-PYRAZIN-2-YL-1,2,4-OXADIAZOL-3-YL) HETNAM 2 8FN BENZO[B][1,4]BENZOTHIAZEPIN-6-ONE HETNAM NI NICKEL (II) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 8FN 4(C22 H15 N5 O2 S) FORMUL 6 NI 5(NI 2+) FORMUL 11 GOL C3 H8 O3 FORMUL 15 HOH *648(H2 O) HELIX 1 AA1 PRO A 211 ARG A 227 1 17 HELIX 2 AA2 ASN A 228 LEU A 235 5 8 HELIX 3 AA3 PHE A 247 ILE A 252 1 6 HELIX 4 AA4 ASP A 257 LEU A 267 1 11 HELIX 5 AA5 ASP A 272 GLY A 292 1 21 HELIX 6 AA6 ALA A 295 VAL A 313 1 19 HELIX 7 AA7 PRO B 211 ARG B 227 1 17 HELIX 8 AA8 ASN B 228 LEU B 235 5 8 HELIX 9 AA9 PHE B 247 ILE B 252 1 6 HELIX 10 AB1 ASP B 257 LEU B 267 1 11 HELIX 11 AB2 ASP B 272 GLY B 292 1 21 HELIX 12 AB3 ALA B 295 VAL B 313 1 19 HELIX 13 AB4 PRO C 211 LYS C 226 1 16 HELIX 14 AB5 ASN C 228 LEU C 235 5 8 HELIX 15 AB6 PHE C 247 ILE C 252 1 6 HELIX 16 AB7 ASP C 257 LEU C 267 1 11 HELIX 17 AB8 ASP C 272 GLY C 292 1 21 HELIX 18 AB9 ALA C 295 VAL C 313 1 19 HELIX 19 AC1 PRO D 211 ARG D 227 1 17 HELIX 20 AC2 ALA D 231 LEU D 235 5 5 HELIX 21 AC3 PHE D 247 ILE D 252 1 6 HELIX 22 AC4 ASP D 257 LEU D 267 1 11 HELIX 23 AC5 ASP D 272 GLY D 292 1 21 HELIX 24 AC6 ALA D 295 VAL D 313 1 19 LINK O2 GOL C 402 N5 8FN D 401 1555 1555 1.32 LINK N GLY A 192 NI NI A 402 1555 1555 1.88 LINK NI NI A 402 O HOH A 542 1555 1555 2.08 LINK NI NI A 402 O HOH A 621 1555 1555 1.79 LINK NI NI A 402 O HOH A 640 1555 1555 2.07 LINK N GLY B 192 NI NI B 401 1555 1555 2.03 LINK NI NI B 401 O HOH B 505 1555 1555 1.94 LINK NI NI B 401 O HOH B 542 1555 1555 1.85 LINK NI NI B 401 O HOH B 651 1555 1555 2.34 LINK NI NI B 401 O HOH B 667 1555 1555 2.35 LINK N GLY C 192 NI NI C 403 1555 1555 1.94 LINK NI NI C 403 O HOH C 505 1555 1555 2.03 LINK NI NI C 403 O HOH C 607 1555 1555 1.90 LINK NI NI C 403 O HOH C 614 1555 1555 2.31 LINK N GLY D 192 NI NI D 402 1555 1555 2.04 LINK NI NI D 402 O HOH D 526 1555 1555 2.10 LINK NI NI D 402 O HOH D 644 1555 1555 2.23 LINK NI NI D 402 O HOH D 662 1555 1555 2.30 CISPEP 1 GLU A 199 PRO A 200 0 1.83 CISPEP 2 GLU B 199 PRO B 200 0 -0.57 CISPEP 3 GLU C 199 PRO C 200 0 -0.36 CISPEP 4 GLU D 199 PRO D 200 0 -0.08 SITE 1 AC1 15 PRO A 233 PHE A 234 VAL A 238 CYS A 287 SITE 2 AC1 15 PHE A 290 ASN A 291 ILE A 297 8FN A 404 SITE 3 AC1 15 HOH A 529 HOH A 602 HOH A 606 PRO B 237 SITE 4 AC1 15 ASP B 239 LYS B 242 LEU B 243 SITE 1 AC2 4 GLY A 192 HOH A 542 HOH A 621 HOH A 640 SITE 1 AC3 3 PRO A 317 LYS A 318 ARG C 227 SITE 1 AC4 14 PRO A 237 ASP A 239 LYS A 242 LEU A 243 SITE 2 AC4 14 8FN A 401 HOH A 598 HOH A 625 PRO B 233 SITE 3 AC4 14 PHE B 234 VAL B 238 CYS B 287 PHE B 290 SITE 4 AC4 14 ASN B 291 HOH B 522 SITE 1 AC5 5 GLY B 192 HOH B 505 HOH B 542 HOH B 651 SITE 2 AC5 5 HOH B 667 SITE 1 AC6 14 VAL C 232 PRO C 233 PHE C 234 VAL C 238 SITE 2 AC6 14 VAL C 245 CYS C 287 PHE C 290 ASN C 291 SITE 3 AC6 14 HOH C 533 PRO D 237 ASP D 239 LYS D 242 SITE 4 AC6 14 LEU D 243 8FN D 401 SITE 1 AC7 4 GLY C 192 HOH C 505 HOH C 607 HOH C 614 SITE 1 AC8 4 GLY D 192 HOH D 526 HOH D 644 HOH D 662 SITE 1 AC9 29 VAL C 232 PRO C 233 PHE C 234 LEU C 235 SITE 2 AC9 29 HIS C 236 PRO C 237 VAL C 238 ASP C 239 SITE 3 AC9 29 LYS C 242 VAL C 245 CYS C 287 PHE C 290 SITE 4 AC9 29 ASN C 291 HOH C 533 GLY D 192 PRO D 233 SITE 5 AC9 29 PHE D 234 PRO D 237 VAL D 238 ASP D 239 SITE 6 AC9 29 LYS D 242 LEU D 243 CYS D 287 PHE D 290 SITE 7 AC9 29 ASN D 291 HOH D 526 HOH D 530 HOH D 644 SITE 8 AC9 29 HOH D 662 CRYST1 75.435 77.292 102.593 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013256 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012938 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009747 0.00000