HEADER TRANSCRIPTION 08-FEB-17 5N2O TITLE STRUCTURE OF P63 SAM DOMAIN L514F MUTANT CAUSATIVE OF AEC SYNDROME COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR PROTEIN 63; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P63,TRANSFORMATION-RELATED PROTEIN 63,TP63,TUMOR PROTEIN COMPND 5 P73-LIKE,P73L; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TP63, P63, P73L, TP73L, TRP63; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, PROTEIN, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.RINNENTHAL,J.M.WUERZ,C.OSTERBURG,P.GUENTERT,V.DOETSCH REVDAT 3 19-JUN-24 5N2O 1 REMARK REVDAT 2 08-MAY-19 5N2O 1 REMARK REVDAT 1 07-FEB-18 5N2O 0 JRNL AUTH C.RUSSO,C.OSTERBURG,A.SIRICO,D.ANTONINI,R.AMBROSIO,J.M.WURZ, JRNL AUTH 2 J.RINNENTHAL,M.FERNIANI,S.KEHRLOESSER,B.SCHAFER,P.GUNTERT, JRNL AUTH 3 S.SINHA,V.DOTSCH,C.MISSERO JRNL TITL PROTEIN AGGREGATION OF THE P63 TRANSCRIPTION FACTOR JRNL TITL 2 UNDERLIES SEVERE SKIN FRAGILITY IN AEC SYNDROME. JRNL REF PROC. NATL. ACAD. SCI. V. 115 E906 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29339502 JRNL DOI 10.1073/PNAS.1713773115 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPALP REMARK 3 AUTHORS : LUGINBUHL, GUNTERT, BILLETER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003433. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 350 UM [U-13C; U-15N] TUMOR REMARK 210 PROTEIN 63, 95% H2O/5% D2O; 350 REMARK 210 UM TUMOR PROTEIN 63, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D 1H-15N TOCSY; 3D REMARK 210 1H-15N NOESY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR, SPARKY, CYANA, TALOS+, REMARK 210 CYANA 3.98 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 11 ARG A 55 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 6 -37.13 -155.99 REMARK 500 1 SER A 20 -85.13 -110.66 REMARK 500 2 SER A 5 98.72 -66.32 REMARK 500 2 SER A 20 -111.75 -110.94 REMARK 500 2 LEU A 31 34.74 -141.90 REMARK 500 2 LEU A 48 29.22 -76.55 REMARK 500 3 LEU A 3 -91.26 -95.71 REMARK 500 3 SER A 20 -105.45 -125.50 REMARK 500 3 LEU A 48 23.85 -70.76 REMARK 500 4 SER A 20 -82.77 -84.13 REMARK 500 5 SER A 20 -71.89 -87.57 REMARK 500 6 LEU A 3 117.35 -161.43 REMARK 500 6 SER A 20 -100.51 -81.00 REMARK 500 7 SER A 5 -0.49 60.28 REMARK 500 7 CYS A 8 77.85 -105.81 REMARK 500 7 SER A 20 -93.55 -123.25 REMARK 500 8 SER A 20 -110.21 -129.05 REMARK 500 8 LEU A 48 35.28 -82.57 REMARK 500 9 ASP A 7 56.55 38.02 REMARK 500 9 SER A 20 -93.17 -78.54 REMARK 500 9 LEU A 31 29.08 -141.45 REMARK 500 9 LEU A 48 27.83 -75.30 REMARK 500 10 SER A 20 -65.35 -121.83 REMARK 500 10 LEU A 48 23.09 -75.97 REMARK 500 11 SER A 20 -92.09 -87.93 REMARK 500 11 SER A 41 -177.31 -67.82 REMARK 500 11 PHE A 54 -39.66 -131.45 REMARK 500 12 LEU A 3 93.78 23.21 REMARK 500 12 SER A 5 -97.30 -79.97 REMARK 500 12 CYS A 8 56.68 -69.87 REMARK 500 12 SER A 20 -87.11 -140.82 REMARK 500 12 LEU A 48 13.40 -69.94 REMARK 500 13 SER A 20 -87.69 -124.57 REMARK 500 13 HIS A 69 -135.46 -134.51 REMARK 500 14 SER A 9 160.13 176.08 REMARK 500 14 SER A 20 -83.06 -118.90 REMARK 500 14 LEU A 48 20.98 -74.90 REMARK 500 14 HIS A 69 27.98 47.65 REMARK 500 15 SER A 20 -87.05 -135.12 REMARK 500 15 HIS A 69 39.66 38.02 REMARK 500 16 SER A 20 -87.34 -129.87 REMARK 500 17 ASP A 7 -94.65 -99.41 REMARK 500 17 LEU A 48 27.15 -75.91 REMARK 500 17 LYS A 49 -2.75 69.13 REMARK 500 18 CYS A 8 -7.39 -144.26 REMARK 500 18 SER A 20 -66.64 -133.32 REMARK 500 19 SER A 20 -90.10 -133.06 REMARK 500 20 SER A 20 -101.38 -127.80 REMARK 500 20 HIS A 69 116.78 -160.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 7 ARG A 66 0.10 SIDE CHAIN REMARK 500 8 TYR A 40 0.07 SIDE CHAIN REMARK 500 8 ARG A 66 0.08 SIDE CHAIN REMARK 500 9 TYR A 40 0.15 SIDE CHAIN REMARK 500 11 ARG A 66 0.10 SIDE CHAIN REMARK 500 15 TYR A 35 0.09 SIDE CHAIN REMARK 500 16 TYR A 40 0.07 SIDE CHAIN REMARK 500 17 TYR A 35 0.07 SIDE CHAIN REMARK 500 19 ARG A 66 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34095 RELATED DB: BMRB REMARK 900 STRUCTURE OF P63 SAM DOMAIN L514F MUTANT CAUSATIVE FOR AEC SYNDROME DBREF 5N2O A 6 70 UNP O88898 P63_MOUSE 545 609 SEQADV 5N2O GLY A 1 UNP O88898 EXPRESSION TAG SEQADV 5N2O PRO A 2 UNP O88898 EXPRESSION TAG SEQADV 5N2O LEU A 3 UNP O88898 EXPRESSION TAG SEQADV 5N2O GLY A 4 UNP O88898 EXPRESSION TAG SEQADV 5N2O SER A 5 UNP O88898 EXPRESSION TAG SEQADV 5N2O PHE A 14 UNP O88898 LEU 553 ENGINEERED MUTATION SEQRES 1 A 70 GLY PRO LEU GLY SER THR ASP CYS SER ILE VAL SER PHE SEQRES 2 A 70 PHE ALA ARG LEU GLY CYS SER SER CYS LEU ASP TYR PHE SEQRES 3 A 70 THR THR GLN GLY LEU THR THR ILE TYR GLN ILE GLU HIS SEQRES 4 A 70 TYR SER MET ASP ASP LEU ALA SER LEU LYS ILE PRO GLU SEQRES 5 A 70 GLN PHE ARG HIS ALA ILE TRP LYS GLY ILE LEU ASP HIS SEQRES 6 A 70 ARG GLN LEU HIS ASP HELIX 1 AA1 SER A 9 GLY A 18 1 10 HELIX 2 AA2 SER A 20 GLY A 30 1 11 HELIX 3 AA3 THR A 33 GLU A 38 1 6 HELIX 4 AA4 SER A 41 LEU A 48 1 8 HELIX 5 AA5 PRO A 51 HIS A 69 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1