HEADER OXIDOREDUCTASE 13-FEB-17 5N57 TITLE STAPHYLOCOCCUS AUREUS CAMBIALISTIC SUPEROXIDE DISMUTASE SODM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SODA, SODM, A4U86_04870, BN1321_40056, ERS072738_00830, SOURCE 5 ERS072840_00559, ERS073147_02394, ERS073767_02269, ERS074020_00889, SOURCE 6 ERS1058648_00955, FORC27_0128, HMPREF3211_00238, SAMEA2298760_02426; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SUPEROXIDE DISMUTASE, CAMBIALISTIC, STAPHYLOCOCCUS AUREUS, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BARWINSKA-SENDRA,A.BASLE,K.WALDRON REVDAT 3 17-JAN-24 5N57 1 LINK REVDAT 2 21-MAR-18 5N57 1 JRNL REVDAT 1 07-MAR-18 5N57 0 JRNL AUTH A.BARWINSKA-SENDRA,A.BASLE,K.J.WALDRON,S.UN JRNL TITL A CHARGE POLARIZATION MODEL FOR THE METAL-SPECIFIC ACTIVITY JRNL TITL 2 OF SUPEROXIDE DISMUTASES. JRNL REF PHYS CHEM CHEM PHYS V. 20 2363 2018 JRNL REFN ESSN 1463-9084 JRNL PMID 29308487 JRNL DOI 10.1039/C7CP06829H REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1146 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1666 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3242 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.57000 REMARK 3 B22 (A**2) : 0.57000 REMARK 3 B33 (A**2) : -1.84000 REMARK 3 B12 (A**2) : 0.28000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.267 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.214 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3338 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3052 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4540 ; 1.695 ; 1.921 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7032 ; 1.031 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 394 ; 6.675 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;38.379 ;25.287 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 548 ;14.269 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;24.044 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 476 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3802 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 806 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1582 ; 2.334 ; 3.242 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1581 ; 2.334 ; 3.240 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1974 ; 3.469 ; 4.853 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1975 ; 3.468 ; 4.856 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1756 ; 2.714 ; 3.447 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1757 ; 2.713 ; 3.450 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2567 ; 4.264 ; 5.054 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3797 ; 5.675 ;36.410 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3782 ; 5.675 ;36.382 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 199 B 2 199 13106 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7870 -2.5170 16.7450 REMARK 3 T TENSOR REMARK 3 T11: 0.4208 T22: 2.0240 REMARK 3 T33: 2.3017 T12: -0.5835 REMARK 3 T13: -0.5522 T23: 0.1587 REMARK 3 L TENSOR REMARK 3 L11: 0.8107 L22: 3.2129 REMARK 3 L33: 0.8275 L12: -0.1758 REMARK 3 L13: -0.8078 L23: 0.0027 REMARK 3 S TENSOR REMARK 3 S11: 0.3170 S12: -1.2511 S13: 0.1850 REMARK 3 S21: 0.6149 S22: -0.2639 S23: -2.7086 REMARK 3 S31: -0.3075 S32: 1.2816 S33: -0.0532 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5N57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003531. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24136 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 46.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2RCV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M KSCN, 34 % PEG 2K MME, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 15.47533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.95067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.21300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.68833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 7.73767 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 55 CB - CG - OD1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 68 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 LYS A 174 CD - CE - NZ ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 30 -66.33 -99.81 REMARK 500 ASP A 135 42.90 70.08 REMARK 500 ASN A 145 -113.31 51.64 REMARK 500 GLN A 172 -122.93 51.39 REMARK 500 LYS B 30 -64.84 -102.97 REMARK 500 ASN B 91 76.70 -117.82 REMARK 500 ASP B 135 -112.91 75.76 REMARK 500 ASN B 145 -116.23 54.39 REMARK 500 GLN B 172 -121.98 49.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 27 NE2 REMARK 620 2 HIS A 81 NE2 91.1 REMARK 620 3 ASP A 161 OD2 87.4 120.0 REMARK 620 4 HIS A 165 NE2 89.3 124.7 115.2 REMARK 620 5 HOH A 323 O 174.3 84.2 92.1 96.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 27 NE2 REMARK 620 2 HIS B 81 NE2 91.4 REMARK 620 3 ASP B 161 OD2 89.4 122.5 REMARK 620 4 HIS B 165 NE2 87.5 121.5 116.0 REMARK 620 5 HOH B 319 O 172.3 95.7 84.3 91.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 201 DBREF 5N57 A 1 199 UNP W8UU58 W8UU58_STAAU 1 199 DBREF 5N57 B 1 199 UNP W8UU58 W8UU58_STAAU 1 199 SEQRES 1 A 199 MET ALA PHE LYS LEU PRO ASN LEU PRO TYR ALA TYR ASP SEQRES 2 A 199 ALA LEU GLU PRO TYR ILE ASP GLN ARG THR MET GLU PHE SEQRES 3 A 199 HIS HIS ASP LYS HIS HIS ASN THR TYR VAL THR LYS LEU SEQRES 4 A 199 ASN ALA THR VAL GLU GLY THR GLU LEU GLU HIS GLN SER SEQRES 5 A 199 LEU ALA ASP MET ILE ALA ASN LEU ASP LYS VAL PRO GLU SEQRES 6 A 199 ALA MET ARG MET SER VAL ARG ASN ASN GLY GLY GLY HIS SEQRES 7 A 199 PHE ASN HIS SER LEU PHE TRP GLU ILE LEU SER PRO ASN SEQRES 8 A 199 SER GLU GLU LYS GLY GLY VAL ILE ASP ASP ILE LYS ALA SEQRES 9 A 199 GLN TRP GLY THR LEU ASP GLU PHE LYS ASN GLU PHE ALA SEQRES 10 A 199 ASN LYS ALA THR THR LEU PHE GLY SER GLY TRP THR TRP SEQRES 11 A 199 LEU VAL VAL ASN ASP GLY LYS LEU GLU ILE VAL THR THR SEQRES 12 A 199 PRO ASN GLN ASP ASN PRO LEU THR GLU GLY LYS THR PRO SEQRES 13 A 199 ILE LEU LEU PHE ASP VAL TRP GLU HIS ALA TYR TYR LEU SEQRES 14 A 199 LYS TYR GLN ASN LYS ARG PRO ASP TYR MET THR ALA PHE SEQRES 15 A 199 TRP ASN ILE VAL ASN TRP LYS LYS VAL ASP GLU LEU TYR SEQRES 16 A 199 GLN ALA ALA LYS SEQRES 1 B 199 MET ALA PHE LYS LEU PRO ASN LEU PRO TYR ALA TYR ASP SEQRES 2 B 199 ALA LEU GLU PRO TYR ILE ASP GLN ARG THR MET GLU PHE SEQRES 3 B 199 HIS HIS ASP LYS HIS HIS ASN THR TYR VAL THR LYS LEU SEQRES 4 B 199 ASN ALA THR VAL GLU GLY THR GLU LEU GLU HIS GLN SER SEQRES 5 B 199 LEU ALA ASP MET ILE ALA ASN LEU ASP LYS VAL PRO GLU SEQRES 6 B 199 ALA MET ARG MET SER VAL ARG ASN ASN GLY GLY GLY HIS SEQRES 7 B 199 PHE ASN HIS SER LEU PHE TRP GLU ILE LEU SER PRO ASN SEQRES 8 B 199 SER GLU GLU LYS GLY GLY VAL ILE ASP ASP ILE LYS ALA SEQRES 9 B 199 GLN TRP GLY THR LEU ASP GLU PHE LYS ASN GLU PHE ALA SEQRES 10 B 199 ASN LYS ALA THR THR LEU PHE GLY SER GLY TRP THR TRP SEQRES 11 B 199 LEU VAL VAL ASN ASP GLY LYS LEU GLU ILE VAL THR THR SEQRES 12 B 199 PRO ASN GLN ASP ASN PRO LEU THR GLU GLY LYS THR PRO SEQRES 13 B 199 ILE LEU LEU PHE ASP VAL TRP GLU HIS ALA TYR TYR LEU SEQRES 14 B 199 LYS TYR GLN ASN LYS ARG PRO ASP TYR MET THR ALA PHE SEQRES 15 B 199 TRP ASN ILE VAL ASN TRP LYS LYS VAL ASP GLU LEU TYR SEQRES 16 B 199 GLN ALA ALA LYS HET MN A 201 1 HET MN B 201 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *121(H2 O) HELIX 1 AA1 ASP A 20 LYS A 30 1 11 HELIX 2 AA2 LYS A 30 GLU A 44 1 15 HELIX 3 AA3 THR A 46 GLN A 51 5 6 HELIX 4 AA4 SER A 52 ASN A 59 1 8 HELIX 5 AA5 LEU A 60 VAL A 63 5 4 HELIX 6 AA6 PRO A 64 ILE A 87 1 24 HELIX 7 AA7 GLY A 96 GLY A 107 1 12 HELIX 8 AA8 THR A 108 THR A 122 1 15 HELIX 9 AA9 ASN A 148 GLY A 153 5 6 HELIX 10 AB1 TRP A 163 ALA A 166 5 4 HELIX 11 AB2 TYR A 167 GLN A 172 1 6 HELIX 12 AB3 LYS A 174 ASN A 184 1 11 HELIX 13 AB4 ASN A 187 LYS A 199 1 13 HELIX 14 AB5 ASP B 20 LYS B 30 1 11 HELIX 15 AB6 LYS B 30 GLU B 44 1 15 HELIX 16 AB7 SER B 52 ASN B 59 1 8 HELIX 17 AB8 LEU B 60 VAL B 63 5 4 HELIX 18 AB9 PRO B 64 ILE B 87 1 24 HELIX 19 AC1 GLY B 96 GLY B 107 1 12 HELIX 20 AC2 THR B 108 THR B 122 1 15 HELIX 21 AC3 ASN B 148 GLY B 153 5 6 HELIX 22 AC4 TRP B 163 ALA B 166 5 4 HELIX 23 AC5 TYR B 167 GLN B 172 1 6 HELIX 24 AC6 LYS B 174 TRP B 183 1 10 HELIX 25 AC7 ASN B 184 VAL B 186 5 3 HELIX 26 AC8 ASN B 187 LYS B 199 1 13 SHEET 1 AA1 3 LYS A 137 PRO A 144 0 SHEET 2 AA1 3 GLY A 127 ASN A 134 -1 N VAL A 132 O GLU A 139 SHEET 3 AA1 3 THR A 155 ASP A 161 -1 O ILE A 157 N LEU A 131 SHEET 1 AA2 3 LYS B 137 PRO B 144 0 SHEET 2 AA2 3 GLY B 127 ASN B 134 -1 N VAL B 132 O GLU B 139 SHEET 3 AA2 3 THR B 155 ASP B 161 -1 O LEU B 158 N LEU B 131 LINK NE2 HIS A 27 MN MN A 201 1555 1555 2.36 LINK NE2 HIS A 81 MN MN A 201 1555 1555 2.33 LINK OD2 ASP A 161 MN MN A 201 1555 1555 1.97 LINK NE2 HIS A 165 MN MN A 201 1555 1555 2.30 LINK MN MN A 201 O HOH A 323 1555 1555 2.21 LINK NE2 HIS B 27 MN MN B 201 1555 1555 2.35 LINK NE2 HIS B 81 MN MN B 201 1555 1555 2.33 LINK OD2 ASP B 161 MN MN B 201 1555 1555 1.91 LINK NE2 HIS B 165 MN MN B 201 1555 1555 2.34 LINK MN MN B 201 O HOH B 319 1555 1555 2.14 CISPEP 1 GLU A 16 PRO A 17 0 -5.89 CISPEP 2 GLU B 16 PRO B 17 0 -2.08 SITE 1 AC1 5 HIS A 27 HIS A 81 ASP A 161 HIS A 165 SITE 2 AC1 5 HOH A 323 SITE 1 AC2 5 HIS B 27 HIS B 81 ASP B 161 HIS B 165 SITE 2 AC2 5 HOH B 319 CRYST1 142.225 142.225 46.426 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007031 0.004059 0.000000 0.00000 SCALE2 0.000000 0.008119 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021540 0.00000