HEADER PROTEIN BINDING 14-FEB-17 5N5P TITLE CRYSTAL STRUCTURE OF RUMINOCOCCUS FLAVEFACIENS' TYPE III COMPLEX TITLE 2 CONTAINING THE FIFTH COHESIN FROM SCAFFOLDIN B AND THE DOCKERIN FROM TITLE 3 SCAFFOLDIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CELLULOSOMAL SCAFFOLDIN PROTEIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: SCAB TYPE III COHESIN DOMAIN, UNP RESIDUES 739-876; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PUTATIVE CELLULOSOMAL SCAFFOLDIN PROTEIN; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: SCAA TYPE III DOCKERIN DOMAIN, UNP RESIDUES 648-730; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINOCOCCUS FLAVEFACIENS FD-1; SOURCE 3 ORGANISM_TAXID: 641112; SOURCE 4 GENE: SCAB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: RUMINOCOCCUS FLAVEFACIENS FD-1; SOURCE 11 ORGANISM_TAXID: 641112; SOURCE 12 GENE: SCAA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CELLULOSOME, COHESIN, DOCKERIN, TYPE III COHESIN-DOCKERIN, COH-DOC, KEYWDS 2 PROTEIN-PROTEIN INTERACTION, CELL ADHESION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.BULE,A.L.CARVALHO,S.NAJMUDIN,C.M.G.A.FONTES REVDAT 3 17-JAN-24 5N5P 1 LINK REVDAT 2 16-MAY-18 5N5P 1 JRNL REVDAT 1 28-FEB-18 5N5P 0 JRNL AUTH P.BULE,V.M.R.PIRES,V.D.ALVES,A.L.CARVALHO,J.A.M.PRATES, JRNL AUTH 2 L.M.A.FERREIRA,S.P.SMITH,H.J.GILBERT,I.NOACH,E.A.BAYER, JRNL AUTH 3 S.NAJMUDIN,C.M.G.A.FONTES JRNL TITL HIGHER ORDER SCAFFOLDIN ASSEMBLY IN RUMINOCOCCUS JRNL TITL 2 FLAVEFACIENS CELLULOSOME IS COORDINATED BY A DISCRETE JRNL TITL 3 COHESIN-DOCKERIN INTERACTION. JRNL REF SCI REP V. 8 6987 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29725056 JRNL DOI 10.1038/S41598-018-25171-8 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 25152 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1322 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 947 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 49.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3287 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 225 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 47.34000 REMARK 3 B22 (A**2) : -5.78000 REMARK 3 B33 (A**2) : -41.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.044 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.035 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.114 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3347 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3177 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4563 ; 1.390 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7330 ; 0.893 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 445 ; 7.069 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;40.855 ;27.385 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;11.628 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 540 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3861 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 675 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 740 875 C 740 875 8048 0.070 0.050 REMARK 3 2 B 644 730 D 644 730 5394 0.030 0.050 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.868 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.132 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 740 A 877 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6500 49.8690 29.0250 REMARK 3 T TENSOR REMARK 3 T11: 0.0295 T22: 0.2459 REMARK 3 T33: 0.4821 T12: -0.0049 REMARK 3 T13: -0.1037 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.8410 L22: 2.0977 REMARK 3 L33: 2.1763 L12: -0.1825 REMARK 3 L13: 0.5087 L23: -0.1350 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0775 S13: 0.1239 REMARK 3 S21: -0.0956 S22: -0.0166 S23: 0.0227 REMARK 3 S31: 0.0765 S32: 0.1508 S33: 0.0165 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 644 B 730 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8440 29.6260 47.2600 REMARK 3 T TENSOR REMARK 3 T11: 0.3630 T22: 0.3082 REMARK 3 T33: 0.4305 T12: 0.1192 REMARK 3 T13: -0.0948 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.5787 L22: 2.1489 REMARK 3 L33: 1.9806 L12: 0.4192 REMARK 3 L13: 0.3653 L23: -0.5785 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: -0.0590 S13: 0.0070 REMARK 3 S21: 0.2246 S22: -0.0816 S23: -0.0999 REMARK 3 S31: 0.5705 S32: 0.3405 S33: 0.0478 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 740 C 876 REMARK 3 ORIGIN FOR THE GROUP (A): 26.5370 69.4100 40.9670 REMARK 3 T TENSOR REMARK 3 T11: 0.0595 T22: 0.2327 REMARK 3 T33: 0.4384 T12: -0.0365 REMARK 3 T13: -0.1413 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.6440 L22: 2.6776 REMARK 3 L33: 3.1997 L12: 0.6946 REMARK 3 L13: -0.5484 L23: -0.3050 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.0459 S13: -0.1635 REMARK 3 S21: 0.0890 S22: 0.0265 S23: -0.0862 REMARK 3 S31: -0.1089 S32: 0.1817 S33: -0.0315 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 644 D 730 REMARK 3 ORIGIN FOR THE GROUP (A): 27.5550 89.4610 22.6720 REMARK 3 T TENSOR REMARK 3 T11: 0.3907 T22: 0.2947 REMARK 3 T33: 0.4352 T12: -0.1519 REMARK 3 T13: -0.1125 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.1841 L22: 1.5875 REMARK 3 L33: 2.4009 L12: -0.4853 REMARK 3 L13: -0.3649 L23: -0.8031 REMARK 3 S TENSOR REMARK 3 S11: 0.1241 S12: 0.0036 S13: 0.0068 REMARK 3 S21: -0.2255 S22: -0.0893 S23: -0.1087 REMARK 3 S31: -0.5588 S32: 0.3209 S33: -0.0348 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5N5P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.82655 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26512 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 47.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.29400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHASER REMARK 200 STARTING MODEL: 5LXV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES 7.5, 1.2M SODIUM CITRATE, REMARK 280 4% V/V ACETONITRILE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 71.44900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR C 877 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 771 38.28 -153.18 REMARK 500 TYR A 798 -72.97 -119.40 REMARK 500 GLN A 808 52.95 39.84 REMARK 500 ALA C 771 40.19 -153.91 REMARK 500 TYR C 798 -74.44 -120.02 REMARK 500 GLN C 808 52.75 39.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 801 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 653 OD1 REMARK 620 2 ASN B 655 OD1 83.1 REMARK 620 3 ASP B 657 OD1 85.2 80.2 REMARK 620 4 ASP B 659 O 79.4 154.4 79.8 REMARK 620 5 ASP B 664 OD1 91.0 75.5 155.7 123.1 REMARK 620 6 ASP B 664 OD2 114.0 123.5 149.6 81.0 52.2 REMARK 620 7 HOH B 927 O 163.0 91.5 78.0 99.8 103.3 82.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 689 OD1 REMARK 620 2 PHE B 691 O 100.1 REMARK 620 3 ASP B 707 O 81.1 161.8 REMARK 620 4 ASP B 712 OD1 87.9 89.2 109.0 REMARK 620 5 ASP B 712 OD2 112.6 120.7 74.4 46.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 801 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 653 OD1 REMARK 620 2 ASN D 655 OD1 84.7 REMARK 620 3 ASP D 657 OD1 87.0 80.1 REMARK 620 4 ASP D 659 O 80.8 155.5 79.5 REMARK 620 5 ASP D 664 OD1 92.0 76.0 156.1 124.0 REMARK 620 6 ASP D 664 OD2 114.5 123.6 147.8 80.6 52.2 REMARK 620 7 HOH D 914 O 167.4 90.9 80.6 99.0 98.4 77.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 689 OD1 REMARK 620 2 PHE D 691 O 107.5 REMARK 620 3 ASP D 707 O 77.6 164.1 REMARK 620 4 ASP D 712 OD1 89.0 91.7 103.6 REMARK 620 5 ASP D 712 OD2 109.0 121.5 68.8 45.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CCN A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 802 DBREF 5N5P A 740 877 UNP A0AEF4 A0AEF4_RUMFL 739 876 DBREF 5N5P B 648 730 UNP A0AEF3 A0AEF3_RUMFL 648 730 DBREF 5N5P C 740 877 UNP A0AEF4 A0AEF4_RUMFL 739 876 DBREF 5N5P D 648 730 UNP A0AEF3 A0AEF3_RUMFL 648 730 SEQADV 5N5P HIS B 644 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P MET B 645 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P ALA B 646 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P SER B 647 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P THR B 711 UNP A0AEF3 ALA 711 CONFLICT SEQADV 5N5P HIS D 644 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P MET D 645 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P ALA D 646 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P SER D 647 UNP A0AEF3 EXPRESSION TAG SEQADV 5N5P THR D 711 UNP A0AEF3 ALA 711 CONFLICT SEQRES 1 A 138 THR PRO ALA THR GLY SER ALA GLU TRP VAL ILE PRO THR SEQRES 2 A 138 VAL ASN ALA LYS PRO GLY GLU LYS VAL THR MET ASP VAL SEQRES 3 A 138 VAL VAL LYS ASN SER ALA ILE GLU VAL ALA GLY ALA GLN SEQRES 4 A 138 PHE ASN ILE LYS GLN THR ALA PRO ILE ALA TYR GLY SER SEQRES 5 A 138 ALA ALA SER GLY ASP ALA TYR ALA ALA ILE VAL PRO ASN SEQRES 6 A 138 GLU THR GLU GLN TYR TYR ALA PHE GLY GLU GLY ILE GLY SEQRES 7 A 138 LYS GLY ILE LYS ALA ALA ASP GLY ALA LYS ILE ILE THR SEQRES 8 A 138 LEU THR PHE ASN VAL PRO ALA ASP CYS ALA LYS GLY THR SEQRES 9 A 138 TYR PRO VAL LYS TRP SER ASN ALA PHE ILE THR ASP THR SEQRES 10 A 138 ASN GLY ASN LYS ILE THR ASP LYS ILE THR LEU THR ASP SEQRES 11 A 138 GLY ALA ILE VAL VAL GLY ASP THR SEQRES 1 B 87 HIS MET ALA SER LYS PRO VAL TRP GLY ASP VAL ASN CYS SEQRES 2 B 87 ASP GLY ASP VAL ASN VAL ALA ASP VAL VAL LEU LEU ASN SEQRES 3 B 87 LYS TRP LEU ASN ASN ASN ALA ASP TYR ALA MET THR ASP SEQRES 4 B 87 GLN GLY LYS VAL ASN ALA ASP CYS PHE ASN PRO GLN ASP SEQRES 5 B 87 ALA ASN GLY GLY ALA VAL ASP ALA SER LYS VAL ASP LEU SEQRES 6 B 87 THR LYS THR ASP SER ASP ALA ILE ILE LYS SER VAL VAL SEQRES 7 B 87 HIS LEU ILE THR LEU PRO ALA LYS GLY SEQRES 1 C 138 THR PRO ALA THR GLY SER ALA GLU TRP VAL ILE PRO THR SEQRES 2 C 138 VAL ASN ALA LYS PRO GLY GLU LYS VAL THR MET ASP VAL SEQRES 3 C 138 VAL VAL LYS ASN SER ALA ILE GLU VAL ALA GLY ALA GLN SEQRES 4 C 138 PHE ASN ILE LYS GLN THR ALA PRO ILE ALA TYR GLY SER SEQRES 5 C 138 ALA ALA SER GLY ASP ALA TYR ALA ALA ILE VAL PRO ASN SEQRES 6 C 138 GLU THR GLU GLN TYR TYR ALA PHE GLY GLU GLY ILE GLY SEQRES 7 C 138 LYS GLY ILE LYS ALA ALA ASP GLY ALA LYS ILE ILE THR SEQRES 8 C 138 LEU THR PHE ASN VAL PRO ALA ASP CYS ALA LYS GLY THR SEQRES 9 C 138 TYR PRO VAL LYS TRP SER ASN ALA PHE ILE THR ASP THR SEQRES 10 C 138 ASN GLY ASN LYS ILE THR ASP LYS ILE THR LEU THR ASP SEQRES 11 C 138 GLY ALA ILE VAL VAL GLY ASP THR SEQRES 1 D 87 HIS MET ALA SER LYS PRO VAL TRP GLY ASP VAL ASN CYS SEQRES 2 D 87 ASP GLY ASP VAL ASN VAL ALA ASP VAL VAL LEU LEU ASN SEQRES 3 D 87 LYS TRP LEU ASN ASN ASN ALA ASP TYR ALA MET THR ASP SEQRES 4 D 87 GLN GLY LYS VAL ASN ALA ASP CYS PHE ASN PRO GLN ASP SEQRES 5 D 87 ALA ASN GLY GLY ALA VAL ASP ALA SER LYS VAL ASP LEU SEQRES 6 D 87 THR LYS THR ASP SER ASP ALA ILE ILE LYS SER VAL VAL SEQRES 7 D 87 HIS LEU ILE THR LEU PRO ALA LYS GLY HET CCN A 900 3 HET CA B 801 1 HET CA B 802 1 HET CA D 801 1 HET CA D 802 1 HETNAM CCN ACETONITRILE HETNAM CA CALCIUM ION FORMUL 5 CCN C2 H3 N FORMUL 6 CA 4(CA 2+) FORMUL 10 HOH *225(H2 O) HELIX 1 AA1 ILE A 861 ASP A 863 5 3 HELIX 2 AA2 ASN B 661 ASN B 674 1 14 HELIX 3 AA3 ASN B 675 TYR B 678 5 4 HELIX 4 AA4 THR B 681 ASP B 689 1 9 HELIX 5 AA5 ASP B 702 VAL B 706 5 5 HELIX 6 AA6 THR B 709 VAL B 721 1 13 HELIX 7 AA7 ILE C 861 ASP C 863 5 3 HELIX 8 AA8 ASN D 661 ASN D 674 1 14 HELIX 9 AA9 ASN D 675 TYR D 678 5 4 HELIX 10 AB1 THR D 681 ASP D 689 1 9 HELIX 11 AB2 ASP D 702 VAL D 706 5 5 HELIX 12 AB3 THR D 709 VAL D 721 1 13 SHEET 1 AA1 5 ALA A 788 SER A 794 0 SHEET 2 AA1 5 LYS A 827 ASN A 834 -1 O THR A 832 N GLY A 790 SHEET 3 AA1 5 LYS A 760 ALA A 771 -1 N MET A 763 O LEU A 831 SHEET 4 AA1 5 SER A 745 VAL A 749 -1 N VAL A 749 O VAL A 766 SHEET 5 AA1 5 ILE A 865 THR A 868 1 O THR A 866 N TRP A 748 SHEET 1 AA2 6 THR A 752 ALA A 755 0 SHEET 2 AA2 6 GLY A 870 VAL A 874 1 O VAL A 873 N VAL A 753 SHEET 3 AA2 6 GLY A 842 THR A 854 -1 N GLY A 842 O VAL A 874 SHEET 4 AA2 6 GLY A 776 GLN A 783 -1 N ASN A 780 O SER A 849 SHEET 5 AA2 6 TYR A 809 GLY A 813 -1 O TYR A 810 N PHE A 779 SHEET 6 AA2 6 VAL A 802 ASN A 804 -1 N ASN A 804 O TYR A 809 SHEET 1 AA3 5 ALA C 788 SER C 794 0 SHEET 2 AA3 5 LYS C 827 ASN C 834 -1 O THR C 832 N GLY C 790 SHEET 3 AA3 5 LYS C 760 ALA C 771 -1 N MET C 763 O LEU C 831 SHEET 4 AA3 5 SER C 745 VAL C 749 -1 N VAL C 749 O VAL C 766 SHEET 5 AA3 5 ILE C 865 THR C 868 1 O THR C 866 N TRP C 748 SHEET 1 AA4 6 THR C 752 ALA C 755 0 SHEET 2 AA4 6 GLY C 870 VAL C 874 1 O VAL C 873 N VAL C 753 SHEET 3 AA4 6 GLY C 842 THR C 854 -1 N GLY C 842 O VAL C 874 SHEET 4 AA4 6 GLY C 776 GLN C 783 -1 N ASN C 780 O SER C 849 SHEET 5 AA4 6 TYR C 809 GLY C 813 -1 O TYR C 810 N PHE C 779 SHEET 6 AA4 6 VAL C 802 ASN C 804 -1 N ASN C 804 O TYR C 809 LINK OD1 ASP B 653 CA CA B 801 1555 1555 2.31 LINK OD1 ASN B 655 CA CA B 801 1555 1555 2.33 LINK OD1 ASP B 657 CA CA B 801 1555 1555 2.47 LINK O ASP B 659 CA CA B 801 1555 1555 2.26 LINK OD1 ASP B 664 CA CA B 801 1555 1555 2.49 LINK OD2 ASP B 664 CA CA B 801 1555 1555 2.47 LINK OD1 ASP B 689 CA CA B 802 1555 1555 2.27 LINK O PHE B 691 CA CA B 802 1555 1555 2.29 LINK O ASP B 707 CA CA B 802 1555 1555 2.39 LINK OD1 ASP B 712 CA CA B 802 1555 1555 2.61 LINK OD2 ASP B 712 CA CA B 802 1555 1555 2.88 LINK CA CA B 801 O HOH B 927 1555 1555 2.33 LINK OD1 ASP D 653 CA CA D 801 1555 1555 2.26 LINK OD1 ASN D 655 CA CA D 801 1555 1555 2.30 LINK OD1 ASP D 657 CA CA D 801 1555 1555 2.47 LINK O ASP D 659 CA CA D 801 1555 1555 2.25 LINK OD1 ASP D 664 CA CA D 801 1555 1555 2.48 LINK OD2 ASP D 664 CA CA D 801 1555 1555 2.51 LINK OD1 ASP D 689 CA CA D 802 1555 1555 2.23 LINK O PHE D 691 CA CA D 802 1555 1555 2.15 LINK O ASP D 707 CA CA D 802 1555 1555 2.60 LINK OD1 ASP D 712 CA CA D 802 1555 1555 2.60 LINK OD2 ASP D 712 CA CA D 802 1555 1555 3.01 LINK CA CA D 801 O HOH D 914 1555 1555 2.31 CISPEP 1 ALA A 785 PRO A 786 0 7.31 CISPEP 2 LEU B 726 PRO B 727 0 -2.25 CISPEP 3 ALA C 785 PRO C 786 0 6.34 CISPEP 4 LEU D 726 PRO D 727 0 -3.04 SITE 1 AC1 2 GLY A 875 ASP A 876 SITE 1 AC2 6 ASP B 653 ASN B 655 ASP B 657 ASP B 659 SITE 2 AC2 6 ASP B 664 HOH B 927 SITE 1 AC3 4 ASP B 689 PHE B 691 ASP B 707 ASP B 712 SITE 1 AC4 6 ASP D 653 ASN D 655 ASP D 657 ASP D 659 SITE 2 AC4 6 ASP D 664 HOH D 914 SITE 1 AC5 4 ASP D 689 PHE D 691 ASP D 707 ASP D 712 CRYST1 30.093 142.898 46.588 90.00 90.75 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033230 0.000000 0.000435 0.00000 SCALE2 0.000000 0.006998 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021467 0.00000