HEADER MOTOR PROTEIN 14-FEB-17 5N6A TITLE CARDIAC MUSCLE MYOSIN MOTOR DOMAIN IN THE PRE-POWERSTROKE STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN-7; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MYOSIN HEAVY CHAIN 7,MYOSIN HEAVY CHAIN SLOW ISOFORM,MYHC- COMPND 5 SLOW,MYOSIN HEAVY CHAIN,CARDIAC MUSCLE BETA ISOFORM,MYHC-BETA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913 KEYWDS MYOSIN, CARDIAC, PRE-POWERSTROKE, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.J.PLANELLES-HERRERO,J.J.HARTMAN,J.ROBERT-PAGANIN,F.I.MALIK, AUTHOR 2 A.HOUDUSSE REVDAT 3 17-JAN-24 5N6A 1 REMARK REVDAT 2 16-AUG-17 5N6A 1 JRNL REVDAT 1 09-AUG-17 5N6A 0 JRNL AUTH V.J.PLANELLES-HERRERO,J.J.HARTMAN,J.ROBERT-PAGANIN, JRNL AUTH 2 F.I.MALIK,A.HOUDUSSE JRNL TITL MECHANISTIC AND STRUCTURAL BASIS FOR ACTIVATION OF CARDIAC JRNL TITL 2 MYOSIN FORCE PRODUCTION BY OMECAMTIV MECARBIL. JRNL REF NAT COMMUN V. 8 190 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28775348 JRNL DOI 10.1038/S41467-017-00176-5 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.320 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 940 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.29 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2979 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2840 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2830 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 149 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5485 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 36 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 93.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.13640 REMARK 3 B22 (A**2) : -0.72830 REMARK 3 B33 (A**2) : -1.40810 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.530 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.527 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.901 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.843 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5644 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7635 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1928 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 148 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 830 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5644 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 750 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6469 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.23 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.49 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 24.31 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -22.6029 37.9161 -29.4712 REMARK 3 T TENSOR REMARK 3 T11: -0.3047 T22: 0.4598 REMARK 3 T33: -0.2128 T12: -0.0399 REMARK 3 T13: -0.0092 T23: 0.0762 REMARK 3 L TENSOR REMARK 3 L11: 0.9482 L22: 1.0647 REMARK 3 L33: 1.7968 L12: 0.3162 REMARK 3 L13: 0.0839 L23: 0.5530 REMARK 3 S TENSOR REMARK 3 S11: 0.0998 S12: -0.1512 S13: 0.1351 REMARK 3 S21: 0.1301 S22: 0.0070 S23: 0.1596 REMARK 3 S31: 0.0904 S32: -0.3065 S33: -0.1069 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N6A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19862 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.020 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.28000 REMARK 200 FOR THE DATA SET : 8.3500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.94000 REMARK 200 FOR SHELL : 1.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1QVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 3350 (W/V), 5% TACSIMATE PH REMARK 280 6.0, 5 MM TCEP, 10% GLYCEROL AND 3.3% DMSO, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.13000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.13000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.83000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.91500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.83000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.91500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 77.13000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.83000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.91500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.13000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.83000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.91500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1036 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ASP A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 5 REMARK 465 MET A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 PHE A 9 REMARK 465 ILE A 201 REMARK 465 GLY A 202 REMARK 465 ASP A 203 REMARK 465 ARG A 204 REMARK 465 SER A 205 REMARK 465 LYS A 206 REMARK 465 LYS A 207 REMARK 465 GLU A 208 REMARK 465 GLN A 209 REMARK 465 ALA A 210 REMARK 465 THR A 211 REMARK 465 GLY A 212 REMARK 465 LYS A 213 REMARK 465 GLY A 214 REMARK 465 THR A 215 REMARK 465 LEU A 297 REMARK 465 LEU A 298 REMARK 465 ILE A 569 REMARK 465 LYS A 570 REMARK 465 GLY A 571 REMARK 465 LYS A 572 REMARK 465 ASP A 628 REMARK 465 THR A 629 REMARK 465 PRO A 630 REMARK 465 ILE A 631 REMARK 465 GLU A 632 REMARK 465 LYS A 633 REMARK 465 GLY A 634 REMARK 465 LYS A 635 REMARK 465 GLY A 636 REMARK 465 LYS A 637 REMARK 465 ALA A 638 REMARK 465 LYS A 639 REMARK 465 LYS A 640 REMARK 465 GLY A 641 REMARK 465 SER A 642 REMARK 465 SER A 643 REMARK 465 ARG A 719 REMARK 465 GLN A 720 REMARK 465 ARG A 721 REMARK 465 TYR A 722 REMARK 465 ARG A 723 REMARK 465 ILE A 724 REMARK 465 LEU A 725 REMARK 465 ASN A 726 REMARK 465 PRO A 727 REMARK 465 ALA A 728 REMARK 465 ALA A 729 REMARK 465 ILE A 730 REMARK 465 PRO A 731 REMARK 465 GLU A 732 REMARK 465 GLY A 733 REMARK 465 GLN A 734 REMARK 465 PHE A 735 REMARK 465 SER A 748 REMARK 465 LEU A 749 REMARK 465 MET A 776 REMARK 465 ARG A 777 REMARK 465 ASP A 778 REMARK 465 GLU A 779 REMARK 465 ARG A 780 REMARK 465 LEU A 781 REMARK 465 SER A 782 REMARK 465 ARG A 783 REMARK 465 ILE A 784 REMARK 465 ILE A 785 REMARK 465 THR A 786 REMARK 465 ARG A 787 REMARK 465 ILE A 788 REMARK 465 GLN A 789 REMARK 465 ALA A 790 REMARK 465 GLN A 791 REMARK 465 SER A 792 REMARK 465 ARG A 793 REMARK 465 GLY A 794 REMARK 465 VAL A 795 REMARK 465 LEU A 796 REMARK 465 SER A 797 REMARK 465 ARG A 798 REMARK 465 MET A 799 REMARK 465 GLU A 800 REMARK 465 PHE A 801 REMARK 465 LYS A 802 REMARK 465 LYS A 803 REMARK 465 LEU A 804 REMARK 465 LEU A 805 REMARK 465 GLU A 806 REMARK 465 ARG A 807 REMARK 465 ARG A 808 REMARK 465 ASP A 809 REMARK 465 SER A 810 REMARK 465 LEU A 811 REMARK 465 LEU A 812 REMARK 465 ILE A 813 REMARK 465 ILE A 814 REMARK 465 GLN A 815 REMARK 465 TRP A 816 REMARK 465 ASN A 817 REMARK 465 ILE A 818 REMARK 465 ARG A 819 REMARK 465 ALA A 820 REMARK 465 PHE A 821 REMARK 465 MET A 822 REMARK 465 GLY A 823 REMARK 465 VAL A 824 REMARK 465 LYS A 825 REMARK 465 ASN A 826 REMARK 465 TRP A 827 REMARK 465 PRO A 828 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 ARG A 23 NE CZ NH1 NH2 REMARK 470 LEU A 24 CG CD1 CD2 REMARK 470 ASP A 32 CG OD1 OD2 REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 86 CG CD CE NZ REMARK 470 MET A 92 SD CE REMARK 470 GLU A 107 CD OE1 OE2 REMARK 470 VAL A 123 CG2 REMARK 470 THR A 124 OG1 CG2 REMARK 470 ILE A 125 CG2 CD1 REMARK 470 VAL A 139 CG2 REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 ILE A 154 CG2 CD1 REMARK 470 ILE A 157 CG2 CD1 REMARK 470 TYR A 164 CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 190 CD NE CZ NH1 NH2 REMARK 470 SER A 260 OG REMARK 470 LEU A 267 CG CD1 CD2 REMARK 470 LYS A 278 CG CD CE NZ REMARK 470 GLU A 296 CG CD OE1 OE2 REMARK 470 MET A 300 CG SD CE REMARK 470 TYR A 308 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 327 CG CD OE1 OE2 REMARK 470 MET A 357 SD CE REMARK 470 PHE A 359 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 367 CD CE NZ REMARK 470 GLN A 368 CG CD OE1 NE2 REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 370 CG CD OE1 OE2 REMARK 470 GLU A 371 CG CD OE1 OE2 REMARK 470 GLU A 374 CD OE1 OE2 REMARK 470 LYS A 383 CD CE NZ REMARK 470 TYR A 386 CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET A 388 CG SD CE REMARK 470 HIS A 401 ND1 CD2 CE1 NE2 REMARK 470 TYR A 410 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 417 CG2 REMARK 470 GLN A 418 CD OE1 NE2 REMARK 470 TYR A 422 CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 431 CG1 REMARK 470 GLU A 433 CD OE1 OE2 REMARK 470 GLN A 451 CG CD OE1 NE2 REMARK 470 ARG A 453 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 454 CD OE1 NE2 REMARK 470 PHE A 456 CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 470 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 484 CD CE NZ REMARK 470 VAL A 495 CG1 CG2 REMARK 470 LYS A 502 CG CD CE NZ REMARK 470 LYS A 503 CG CD CE NZ REMARK 470 LYS A 526 CG CD CE NZ REMARK 470 MET A 539 CG SD CE REMARK 470 LYS A 549 CD CE NZ REMARK 470 LYS A 551 CG CD CE NZ REMARK 470 ASP A 554 OD1 OD2 REMARK 470 LEU A 579 CG CD1 CD2 REMARK 470 ASP A 607 CG OD1 OD2 REMARK 470 LYS A 615 CD CE NZ REMARK 470 MET A 616 SD CE REMARK 470 GLN A 645 CG CD OE1 NE2 REMARK 470 ARG A 663 CD NE CZ NH1 NH2 REMARK 470 THR A 678 CG2 REMARK 470 ASN A 686 CG OD1 ND2 REMARK 470 MET A 690 SD CE REMARK 470 PHE A 718 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 762 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 11 -142.11 -167.49 REMARK 500 LEU A 16 116.78 -160.09 REMARK 500 ARG A 17 -62.30 66.77 REMARK 500 ARG A 23 -178.48 68.54 REMARK 500 ARG A 23 -178.48 61.39 REMARK 500 PHE A 31 -87.59 -115.70 REMARK 500 ASP A 32 -155.84 57.10 REMARK 500 GLU A 55 -91.21 -166.96 REMARK 500 GLU A 62 -68.97 69.41 REMARK 500 THR A 63 -7.28 63.24 REMARK 500 HIS A 65 12.65 -156.08 REMARK 500 LYS A 67 -143.58 -160.38 REMARK 500 THR A 68 127.75 -28.67 REMARK 500 VAL A 71 89.58 -55.32 REMARK 500 LYS A 72 -59.07 -136.86 REMARK 500 GLU A 73 -127.44 50.54 REMARK 500 VAL A 76 -74.32 38.91 REMARK 500 LEU A 77 96.98 51.96 REMARK 500 PRO A 82 -0.47 -57.30 REMARK 500 ASP A 85 119.12 -37.05 REMARK 500 ALA A 91 1.68 -66.86 REMARK 500 LEU A 120 -71.27 -118.85 REMARK 500 ASN A 126 123.02 -37.26 REMARK 500 HIS A 153 141.07 -175.07 REMARK 500 ILE A 198 -52.52 -145.26 REMARK 500 ASN A 240 51.22 -114.06 REMARK 500 SER A 260 -166.53 -167.90 REMARK 500 TYR A 266 -142.48 -129.23 REMARK 500 LEU A 267 74.59 -57.79 REMARK 500 ALA A 279 -15.47 76.93 REMARK 500 THR A 304 -119.90 -142.40 REMARK 500 PRO A 307 -141.06 -85.07 REMARK 500 TYR A 308 -84.33 41.87 REMARK 500 ILE A 313 -40.32 -136.86 REMARK 500 SER A 314 48.29 -66.30 REMARK 500 LYS A 365 -136.76 -84.69 REMARK 500 ARG A 369 -8.41 -47.08 REMARK 500 GLU A 370 -78.80 -73.55 REMARK 500 GLU A 371 61.56 -157.62 REMARK 500 GLU A 379 58.28 -94.51 REMARK 500 MET A 388 64.76 14.02 REMARK 500 LEU A 395 -49.27 76.38 REMARK 500 HIS A 401 75.27 -118.10 REMARK 500 TYR A 410 90.42 -66.83 REMARK 500 ALA A 445 32.48 -77.39 REMARK 500 THR A 446 -60.20 -144.95 REMARK 500 LYS A 450 -86.50 -165.39 REMARK 500 GLN A 451 59.10 -151.67 REMARK 500 ARG A 453 -176.27 145.25 REMARK 500 GLN A 454 -151.13 68.49 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 903 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 185 OG1 REMARK 620 2 SER A 242 OG 78.0 REMARK 620 3 ADP A 901 O3B 90.1 157.1 REMARK 620 4 PO4 A 902 O4 151.8 101.5 79.9 REMARK 620 5 HOH A1003 O 107.2 92.5 109.8 101.0 REMARK 620 6 HOH A1004 O 79.2 69.2 89.5 74.5 159.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 904 DBREF 5N6A A 1 828 UNP Q9BE39 MYH7_BOVIN 1 828 SEQRES 1 A 828 MET VAL ASP ALA GLU MET ALA ALA PHE GLY GLU ALA ALA SEQRES 2 A 828 PRO TYR LEU ARG LYS SER GLU LYS GLU ARG LEU GLU ALA SEQRES 3 A 828 GLN THR ARG PRO PHE ASP LEU LYS LYS ASP VAL PHE VAL SEQRES 4 A 828 PRO ASP ASP LYS GLU GLU PHE VAL LYS ALA THR ILE LEU SEQRES 5 A 828 SER ARG GLU GLY GLY LYS VAL THR ALA GLU THR GLU HIS SEQRES 6 A 828 GLY LYS THR VAL THR VAL LYS GLU ASP GLN VAL LEU GLN SEQRES 7 A 828 GLN ASN PRO PRO LYS PHE ASP LYS ILE GLU ASP MET ALA SEQRES 8 A 828 MET LEU THR PHE LEU HIS GLU PRO ALA VAL LEU TYR ASN SEQRES 9 A 828 LEU LYS GLU ARG TYR ALA SER TRP MET ILE TYR THR TYR SEQRES 10 A 828 SER GLY LEU PHE CYS VAL THR ILE ASN PRO TYR LYS TRP SEQRES 11 A 828 LEU PRO VAL TYR ASN ALA GLU VAL VAL ALA ALA TYR ARG SEQRES 12 A 828 GLY LYS LYS ARG SER GLU ALA PRO PRO HIS ILE PHE SER SEQRES 13 A 828 ILE SER ASP ASN ALA TYR GLN TYR MET LEU THR ASP ARG SEQRES 14 A 828 GLU ASN GLN SER ILE LEU ILE THR GLY GLU SER GLY ALA SEQRES 15 A 828 GLY LYS THR VAL ASN THR LYS ARG VAL ILE GLN TYR PHE SEQRES 16 A 828 ALA VAL ILE ALA ALA ILE GLY ASP ARG SER LYS LYS GLU SEQRES 17 A 828 GLN ALA THR GLY LYS GLY THR LEU GLU ASP GLN ILE ILE SEQRES 18 A 828 GLN ALA ASN PRO ALA LEU GLU ALA PHE GLY ASN ALA LYS SEQRES 19 A 828 THR VAL ARG ASN ASP ASN SER SER ARG PHE GLY LYS PHE SEQRES 20 A 828 ILE ARG ILE HIS PHE GLY ALA THR GLY LYS LEU ALA SER SEQRES 21 A 828 ALA ASP ILE GLU THR TYR LEU LEU GLU LYS SER ARG VAL SEQRES 22 A 828 ILE PHE GLN LEU LYS ALA GLU ARG ASP TYR HIS ILE PHE SEQRES 23 A 828 TYR GLN ILE LEU SER ASN LYS LYS PRO GLU LEU LEU ASP SEQRES 24 A 828 MET LEU LEU ILE THR ASN ASN PRO TYR ASP TYR ALA PHE SEQRES 25 A 828 ILE SER GLN GLY GLU THR THR VAL ALA SER ILE ASP ASP SEQRES 26 A 828 ALA GLU GLU LEU MET ALA THR ASP ASN ALA PHE ASP VAL SEQRES 27 A 828 LEU GLY PHE THR THR GLU GLU LYS ASN SER MET TYR LYS SEQRES 28 A 828 LEU THR GLY ALA ILE MET HIS PHE GLY ASN MET LYS PHE SEQRES 29 A 828 LYS LEU LYS GLN ARG GLU GLU GLN ALA GLU PRO ASP GLY SEQRES 30 A 828 THR GLU GLU ALA ASP LYS SER ALA TYR LEU MET GLY LEU SEQRES 31 A 828 ASN SER ALA ASP LEU LEU LYS GLY LEU CYS HIS PRO ARG SEQRES 32 A 828 VAL LYS VAL GLY ASN GLU TYR VAL THR LYS GLY GLN ASN SEQRES 33 A 828 VAL GLN GLN VAL VAL TYR ALA LYS GLY ALA LEU ALA LYS SEQRES 34 A 828 ALA VAL TYR GLU ARG MET PHE ASN TRP MET VAL THR ARG SEQRES 35 A 828 ILE ASN ALA THR LEU GLU THR LYS GLN PRO ARG GLN TYR SEQRES 36 A 828 PHE ILE GLY VAL LEU ASP ILE ALA GLY PHE GLU ILE PHE SEQRES 37 A 828 ASP PHE ASN SER PHE GLU GLN LEU CYS ILE ASN PHE THR SEQRES 38 A 828 ASN GLU LYS LEU GLN GLN PHE PHE ASN HIS HIS MET PHE SEQRES 39 A 828 VAL LEU GLU GLN GLU GLU TYR LYS LYS GLU GLY ILE GLU SEQRES 40 A 828 TRP GLU PHE ILE ASP PHE GLY MET ASP LEU GLN ALA CYS SEQRES 41 A 828 ILE ASP LEU ILE GLU LYS PRO MET GLY ILE MET SER ILE SEQRES 42 A 828 LEU GLU GLU GLU CYS MET PHE PRO LYS ALA THR ASP MET SEQRES 43 A 828 THR PHE LYS ALA LYS LEU PHE ASP ASN HIS LEU GLY LYS SEQRES 44 A 828 SER SER ASN PHE GLN LYS PRO ARG ASN ILE LYS GLY LYS SEQRES 45 A 828 PRO GLU ALA HIS PHE SER LEU ILE HIS TYR ALA GLY THR SEQRES 46 A 828 VAL ASP TYR ASN ILE ILE GLY TRP LEU GLN LYS ASN LYS SEQRES 47 A 828 ASP PRO LEU ASN GLU THR VAL VAL ASP LEU TYR LYS LYS SEQRES 48 A 828 SER SER LEU LYS MET LEU SER SER LEU PHE ALA ASN TYR SEQRES 49 A 828 ALA GLY PHE ASP THR PRO ILE GLU LYS GLY LYS GLY LYS SEQRES 50 A 828 ALA LYS LYS GLY SER SER PHE GLN THR VAL SER ALA LEU SEQRES 51 A 828 HIS ARG GLU ASN LEU ASN LYS LEU MET THR ASN LEU ARG SEQRES 52 A 828 SER THR HIS PRO HIS PHE VAL ARG CYS ILE ILE PRO ASN SEQRES 53 A 828 GLU THR LYS SER PRO GLY VAL ILE ASP ASN PRO LEU VAL SEQRES 54 A 828 MET HIS GLN LEU ARG CYS ASN GLY VAL LEU GLU GLY ILE SEQRES 55 A 828 ARG ILE CYS ARG LYS GLY PHE PRO ASN ARG ILE LEU TYR SEQRES 56 A 828 GLY ASP PHE ARG GLN ARG TYR ARG ILE LEU ASN PRO ALA SEQRES 57 A 828 ALA ILE PRO GLU GLY GLN PHE ILE ASP SER ARG LYS GLY SEQRES 58 A 828 ALA GLU LYS LEU LEU GLY SER LEU ASP ILE ASP HIS ASN SEQRES 59 A 828 GLN TYR LYS PHE GLY HIS THR LYS VAL PHE PHE LYS ALA SEQRES 60 A 828 GLY LEU LEU GLY LEU LEU GLU GLU MET ARG ASP GLU ARG SEQRES 61 A 828 LEU SER ARG ILE ILE THR ARG ILE GLN ALA GLN SER ARG SEQRES 62 A 828 GLY VAL LEU SER ARG MET GLU PHE LYS LYS LEU LEU GLU SEQRES 63 A 828 ARG ARG ASP SER LEU LEU ILE ILE GLN TRP ASN ILE ARG SEQRES 64 A 828 ALA PHE MET GLY VAL LYS ASN TRP PRO HET ADP A 901 27 HET PO4 A 902 5 HET MG A 903 1 HET GOL A 904 6 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 PO4 O4 P 3- FORMUL 4 MG MG 2+ FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *36(H2 O) HELIX 1 AA1 ASP A 89 LEU A 93 5 5 HELIX 2 AA2 HIS A 97 ALA A 110 1 14 HELIX 3 AA3 ASN A 135 ARG A 143 1 9 HELIX 4 AA4 HIS A 153 ASP A 168 1 16 HELIX 5 AA5 GLY A 183 VAL A 197 1 15 HELIX 6 AA6 ASP A 218 ASN A 224 1 7 HELIX 7 AA7 PRO A 225 LEU A 227 5 3 HELIX 8 AA8 GLU A 269 VAL A 273 5 5 HELIX 9 AA9 TYR A 283 ASN A 292 1 10 HELIX 10 AB1 ASP A 324 LEU A 339 1 16 HELIX 11 AB2 THR A 342 GLY A 360 1 19 HELIX 12 AB3 ASP A 382 LEU A 387 1 6 HELIX 13 AB4 SER A 392 HIS A 401 1 10 HELIX 14 AB5 ASN A 416 GLU A 448 1 33 HELIX 15 AB6 SER A 472 PHE A 494 1 23 HELIX 16 AB7 VAL A 495 GLY A 505 1 11 HELIX 17 AB8 LEU A 517 GLU A 525 1 9 HELIX 18 AB9 GLY A 529 PHE A 540 1 12 HELIX 19 AC1 THR A 544 LEU A 557 1 14 HELIX 20 AC2 TRP A 593 LYS A 598 1 6 HELIX 21 AC3 ASN A 602 LYS A 611 1 10 HELIX 22 AC4 LEU A 614 ASN A 623 1 10 HELIX 23 AC5 THR A 646 ARG A 663 1 18 HELIX 24 AC6 ASP A 685 MET A 690 1 6 HELIX 25 AC7 HIS A 691 GLY A 697 1 7 HELIX 26 AC8 LYS A 766 GLU A 775 1 10 SHEET 1 AA1 4 LYS A 58 THR A 60 0 SHEET 2 AA1 4 PHE A 46 ARG A 54 -1 N LEU A 52 O VAL A 59 SHEET 3 AA1 4 ASP A 36 PRO A 40 -1 N VAL A 39 O VAL A 47 SHEET 4 AA1 4 GLN A 78 GLN A 79 -1 O GLN A 79 N ASP A 36 SHEET 1 AA2 7 TYR A 115 TYR A 117 0 SHEET 2 AA2 7 CYS A 122 ILE A 125 -1 O VAL A 123 N THR A 116 SHEET 3 AA2 7 HIS A 666 ILE A 673 1 O ARG A 671 N THR A 124 SHEET 4 AA2 7 GLN A 172 GLY A 178 1 N LEU A 175 O HIS A 668 SHEET 5 AA2 7 PHE A 456 ASP A 461 1 O GLY A 458 N ILE A 174 SHEET 6 AA2 7 LYS A 246 PHE A 252 -1 N ILE A 250 O ILE A 457 SHEET 7 AA2 7 LEU A 258 THR A 265 -1 O ASP A 262 N ARG A 249 SHEET 1 AA3 2 ASN A 232 ALA A 233 0 SHEET 2 AA3 2 SER A 241 SER A 242 -1 O SER A 241 N ALA A 233 SHEET 1 AA4 2 LYS A 365 GLN A 368 0 SHEET 2 AA4 2 GLN A 372 GLU A 374 -1 O GLN A 372 N LYS A 367 SHEET 1 AA5 2 ARG A 403 VAL A 406 0 SHEET 2 AA5 2 GLU A 409 THR A 412 -1 O VAL A 411 N VAL A 404 SHEET 1 AA6 3 PHE A 563 GLN A 564 0 SHEET 2 AA6 3 PHE A 577 LEU A 579 -1 O SER A 578 N GLN A 564 SHEET 3 AA6 3 VAL A 586 TYR A 588 -1 O TYR A 588 N PHE A 577 SHEET 1 AA7 3 ASN A 711 ARG A 712 0 SHEET 2 AA7 3 PHE A 764 PHE A 765 -1 O PHE A 765 N ASN A 711 SHEET 3 AA7 3 TYR A 756 LYS A 757 -1 N LYS A 757 O PHE A 764 LINK OG1 THR A 185 MG MG A 903 1555 1555 1.97 LINK OG SER A 242 MG MG A 903 1555 1555 2.29 LINK O3B ADP A 901 MG MG A 903 1555 1555 2.14 LINK O4 PO4 A 902 MG MG A 903 1555 1555 2.04 LINK MG MG A 903 O HOH A1003 1555 1555 2.79 LINK MG MG A 903 O HOH A1004 1555 1555 2.42 CISPEP 1 GLU A 509 PHE A 510 0 1.77 CISPEP 2 PRO A 527 MET A 528 0 1.50 CISPEP 3 LYS A 762 VAL A 763 0 -0.38 SITE 1 AC1 19 ILE A 114 ASN A 126 PRO A 127 TYR A 128 SITE 2 AC1 19 LYS A 129 TRP A 130 TYR A 134 GLU A 179 SITE 3 AC1 19 GLY A 181 ALA A 182 GLY A 183 LYS A 184 SITE 4 AC1 19 THR A 185 VAL A 186 ASN A 238 PO4 A 902 SITE 5 AC1 19 MG A 903 HOH A1004 HOH A1010 SITE 1 AC2 11 SER A 180 GLY A 181 LYS A 184 ASN A 238 SITE 2 AC2 11 SER A 241 SER A 242 ARG A 243 GLY A 464 SITE 3 AC2 11 ADP A 901 MG A 903 HOH A1004 SITE 1 AC3 7 THR A 185 SER A 242 ASP A 461 ADP A 901 SITE 2 AC3 7 PO4 A 902 HOH A1003 HOH A1004 SITE 1 AC4 5 GLU A 574 ALA A 575 HIS A 576 ASN A 589 SITE 2 AC4 5 ILE A 590 CRYST1 87.660 149.830 154.260 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011408 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006483 0.00000