HEADER CHAPERONE 21-FEB-17 5N7R OBSLTE 08-AUG-18 5N7R 6H7X TITLE FIRST X-RAY STRUCTURE OF FULL-LENGTH HUMAN RUVB-LIKE 2. COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUVB-LIKE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 48 KDA TATA BOX-BINDING PROTEIN-INTERACTING PROTEIN,48 KDA COMPND 5 TBP-INTERACTING PROTEIN,51 KDA ERYTHROCYTE CYTOSOLIC PROTEIN,ECP-51, COMPND 6 INO80 COMPLEX SUBUNIT J,REPRESSING PONTIN 52,REPTIN 52,TIP49B,TIP60- COMPND 7 ASSOCIATED PROTEIN 54-BETA,TAP54-BETA; COMPND 8 EC: 3.6.4.12; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RUVBL2, INO80J, TIP48, TIP49B, CGI-46; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATPASE, HELICASE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR S.SILVA,J.A.BRITO,P.MATIAS,T.BANDEIRAS REVDAT 3 15-AUG-18 5N7R 1 OBSLTE REVDAT 2 08-AUG-18 5N7R 1 OBSLTE COMPND HETNAM REVDAT 1 11-APR-18 5N7R 0 JRNL AUTH S.SILVA,J.A.BRITO,P.MATIAS,T.BANDEIRAS,R.ARRANZ,C.EBEL, JRNL AUTH 2 J.DOUTCH,M.TULLY,R.RAMBO,J.CARRASCOSA JRNL TITL STRUCTURE OF HUMAN RUVB-LIKE 2 PROVIDES MECHANISM FOR JRNL TITL 2 COUPLING BETWEEN ATP BINDING AND MECHANICAL ACTION. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 11361 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 577 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.38 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2714 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2001 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2544 REMARK 3 BIN R VALUE (WORKING SET) : 0.1933 REMARK 3 BIN FREE R VALUE : 0.3045 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.26 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 170 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2946 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 59 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.61280 REMARK 3 B22 (A**2) : -1.61280 REMARK 3 B33 (A**2) : 3.22560 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.310 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.378 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.868 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6027 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 10933 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1393 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 78 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 851 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6027 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 416 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6522 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.01 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.93 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|45 - A|139 } REMARK 3 ORIGIN FOR THE GROUP (A): 98.2192 105.7914 -21.8182 REMARK 3 T TENSOR REMARK 3 T11: 0.1738 T22: 0.2869 REMARK 3 T33: 0.1970 T12: 0.0631 REMARK 3 T13: -0.0450 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.5604 L22: 0.7244 REMARK 3 L33: 1.4426 L12: 0.1493 REMARK 3 L13: 0.1578 L23: 0.3297 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: -0.4177 S13: 0.0522 REMARK 3 S21: 0.1494 S22: 0.0649 S23: -0.1011 REMARK 3 S31: 0.2184 S32: 0.3321 S33: -0.0060 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|140 - A|251 } REMARK 3 ORIGIN FOR THE GROUP (A): 120.3391 91.9066 4.2364 REMARK 3 T TENSOR REMARK 3 T11: 0.4496 T22: 0.7596 REMARK 3 T33: 0.6703 T12: 0.0361 REMARK 3 T13: -0.1571 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 8.7263 L22: 0.3139 REMARK 3 L33: 1.4694 L12: -4.2556 REMARK 3 L13: 4.7299 L23: -2.4356 REMARK 3 S TENSOR REMARK 3 S11: 0.6160 S12: 0.6240 S13: -0.9717 REMARK 3 S21: -0.3773 S22: -0.2674 S23: 0.2537 REMARK 3 S31: 0.2111 S32: 0.2485 S33: -0.3486 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|252 - A|347 } REMARK 3 ORIGIN FOR THE GROUP (A): 86.8344 108.4825 -18.0643 REMARK 3 T TENSOR REMARK 3 T11: 0.1846 T22: 0.2467 REMARK 3 T33: 0.1458 T12: -0.0038 REMARK 3 T13: -0.0182 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 2.1466 L22: 1.6067 REMARK 3 L33: 3.7633 L12: -0.2579 REMARK 3 L13: 1.4386 L23: -0.0663 REMARK 3 S TENSOR REMARK 3 S11: 0.1016 S12: -0.3659 S13: 0.0255 REMARK 3 S21: 0.0789 S22: -0.0017 S23: -0.0170 REMARK 3 S31: 0.1873 S32: -0.2799 S33: -0.0999 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|348 - A|457 } REMARK 3 ORIGIN FOR THE GROUP (A): 94.7514 84.3158 -41.2968 REMARK 3 T TENSOR REMARK 3 T11: 0.1738 T22: 0.2760 REMARK 3 T33: 0.2439 T12: 0.0382 REMARK 3 T13: 0.0576 T23: -0.0804 REMARK 3 L TENSOR REMARK 3 L11: 0.8596 L22: 2.8160 REMARK 3 L33: 0.3526 L12: 1.3797 REMARK 3 L13: 0.5846 L23: -0.2565 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: 0.2437 S13: -0.2100 REMARK 3 S21: -0.0895 S22: 0.1434 S23: -0.8660 REMARK 3 S31: 0.1005 S32: 0.2301 S33: -0.1331 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N7R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 273.15 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97620 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11415 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.870 REMARK 200 RESOLUTION RANGE LOW (A) : 40.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2C9O REMARK 200 REMARK 200 REMARK: HEXAGONAL NEEDLE. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MAGNESIUM CHLORIDE, PH 6, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 108550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -327.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 184.44150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 106.48735 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 212.97470 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 122.96100 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 212.97470 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 -61.48050 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 106.48735 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 122.96100 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 VAL A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 LYS A 9 REMARK 465 VAL A 10 REMARK 465 PRO A 11 REMARK 465 GLU A 12 REMARK 465 ILE A 13 REMARK 465 ARG A 14 REMARK 465 ASP A 15 REMARK 465 VAL A 16 REMARK 465 THR A 17 REMARK 465 ARG A 18 REMARK 465 ILE A 19 REMARK 465 GLU A 20 REMARK 465 ARG A 21 REMARK 465 ILE A 22 REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 HIS A 25 REMARK 465 SER A 26 REMARK 465 HIS A 27 REMARK 465 ILE A 28 REMARK 465 ARG A 29 REMARK 465 GLY A 30 REMARK 465 LEU A 31 REMARK 465 GLY A 32 REMARK 465 LEU A 33 REMARK 465 ASP A 34 REMARK 465 ASP A 35 REMARK 465 ALA A 36 REMARK 465 LEU A 37 REMARK 465 GLU A 38 REMARK 465 PRO A 39 REMARK 465 ARG A 40 REMARK 465 GLN A 41 REMARK 465 ASP A 148 REMARK 465 ARG A 149 REMARK 465 PRO A 150 REMARK 465 ALA A 151 REMARK 465 THR A 152 REMARK 465 GLY A 153 REMARK 465 THR A 154 REMARK 465 GLY A 155 REMARK 465 SER A 156 REMARK 465 ILE A 202 REMARK 465 SER A 203 REMARK 465 LYS A 204 REMARK 465 LEU A 205 REMARK 465 GLY A 206 REMARK 465 ARG A 207 REMARK 465 SER A 208 REMARK 465 PHE A 209 REMARK 465 THR A 210 REMARK 465 ARG A 211 REMARK 465 ALA A 212 REMARK 465 ARG A 213 REMARK 465 ASP A 214 REMARK 465 TYR A 215 REMARK 465 ASP A 216 REMARK 465 ALA A 217 REMARK 465 MET A 218 REMARK 465 GLY A 219 REMARK 465 SER A 220 REMARK 465 GLN A 221 REMARK 465 THR A 222 REMARK 465 LYS A 223 REMARK 465 PHE A 224 REMARK 465 VAL A 225 REMARK 465 GLN A 226 REMARK 465 THR A 254 REMARK 465 GLN A 255 REMARK 465 GLU A 458 REMARK 465 THR A 459 REMARK 465 MET A 460 REMARK 465 ASP A 461 REMARK 465 THR A 462 REMARK 465 SER A 463 REMARK 465 LEU A 464 REMARK 465 GLU A 465 REMARK 465 VAL A 466 REMARK 465 LEU A 467 REMARK 465 PHE A 468 REMARK 465 GLN A 469 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 44 66.43 -160.64 REMARK 500 ASP A 97 47.87 -104.82 REMARK 500 ASP A 185 -60.51 -135.75 REMARK 500 LYS A 186 -16.51 69.32 REMARK 500 GLN A 188 68.34 -64.13 REMARK 500 ALA A 189 141.97 -179.68 REMARK 500 ASP A 191 139.69 179.67 REMARK 500 LYS A 197 -163.20 -164.78 REMARK 500 THR A 397 -86.25 -131.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1006 DBREF 5N7R A 2 463 UNP Q9Y230 RUVB2_HUMAN 2 463 SEQADV 5N7R LEU A 464 UNP Q9Y230 CLONING ARTIFACT SEQADV 5N7R GLU A 465 UNP Q9Y230 CLONING ARTIFACT SEQADV 5N7R VAL A 466 UNP Q9Y230 CLONING ARTIFACT SEQADV 5N7R LEU A 467 UNP Q9Y230 CLONING ARTIFACT SEQADV 5N7R PHE A 468 UNP Q9Y230 CLONING ARTIFACT SEQADV 5N7R GLN A 469 UNP Q9Y230 CLONING ARTIFACT SEQRES 1 A 468 ALA THR VAL THR ALA THR THR LYS VAL PRO GLU ILE ARG SEQRES 2 A 468 ASP VAL THR ARG ILE GLU ARG ILE GLY ALA HIS SER HIS SEQRES 3 A 468 ILE ARG GLY LEU GLY LEU ASP ASP ALA LEU GLU PRO ARG SEQRES 4 A 468 GLN ALA SER GLN GLY MET VAL GLY GLN LEU ALA ALA ARG SEQRES 5 A 468 ARG ALA ALA GLY VAL VAL LEU GLU MET ILE ARG GLU GLY SEQRES 6 A 468 LYS ILE ALA GLY ARG ALA VAL LEU ILE ALA GLY GLN PRO SEQRES 7 A 468 GLY THR GLY LYS THR ALA ILE ALA MET GLY MET ALA GLN SEQRES 8 A 468 ALA LEU GLY PRO ASP THR PRO PHE THR ALA ILE ALA GLY SEQRES 9 A 468 SER GLU ILE PHE SER LEU GLU MET SER LYS THR GLU ALA SEQRES 10 A 468 LEU THR GLN ALA PHE ARG ARG SER ILE GLY VAL ARG ILE SEQRES 11 A 468 LYS GLU GLU THR GLU ILE ILE GLU GLY GLU VAL VAL GLU SEQRES 12 A 468 ILE GLN ILE ASP ARG PRO ALA THR GLY THR GLY SER LYS SEQRES 13 A 468 VAL GLY LYS LEU THR LEU LYS THR THR GLU MET GLU THR SEQRES 14 A 468 ILE TYR ASP LEU GLY THR LYS MET ILE GLU SER LEU THR SEQRES 15 A 468 LYS ASP LYS VAL GLN ALA GLY ASP VAL ILE THR ILE ASP SEQRES 16 A 468 LYS ALA THR GLY LYS ILE SER LYS LEU GLY ARG SER PHE SEQRES 17 A 468 THR ARG ALA ARG ASP TYR ASP ALA MET GLY SER GLN THR SEQRES 18 A 468 LYS PHE VAL GLN CYS PRO ASP GLY GLU LEU GLN LYS ARG SEQRES 19 A 468 LYS GLU VAL VAL HIS THR VAL SER LEU HIS GLU ILE ASP SEQRES 20 A 468 VAL ILE ASN SER ARG THR GLN GLY PHE LEU ALA LEU PHE SEQRES 21 A 468 SER GLY ASP THR GLY GLU ILE LYS SER GLU VAL ARG GLU SEQRES 22 A 468 GLN ILE ASN ALA LYS VAL ALA GLU TRP ARG GLU GLU GLY SEQRES 23 A 468 LYS ALA GLU ILE ILE PRO GLY VAL LEU PHE ILE ASP GLU SEQRES 24 A 468 VAL HIS MET LEU ASP ILE GLU SER PHE SER PHE LEU ASN SEQRES 25 A 468 ARG ALA LEU GLU SER ASP MET ALA PRO VAL LEU ILE MET SEQRES 26 A 468 ALA THR ASN ARG GLY ILE THR ARG ILE ARG GLY THR SER SEQRES 27 A 468 TYR GLN SER PRO HIS GLY ILE PRO ILE ASP LEU LEU ASP SEQRES 28 A 468 ARG LEU LEU ILE VAL SER THR THR PRO TYR SER GLU LYS SEQRES 29 A 468 ASP THR LYS GLN ILE LEU ARG ILE ARG CYS GLU GLU GLU SEQRES 30 A 468 ASP VAL GLU MET SER GLU ASP ALA TYR THR VAL LEU THR SEQRES 31 A 468 ARG ILE GLY LEU GLU THR SER LEU ARG TYR ALA ILE GLN SEQRES 32 A 468 LEU ILE THR ALA ALA SER LEU VAL CYS ARG LYS ARG LYS SEQRES 33 A 468 GLY THR GLU VAL GLN VAL ASP ASP ILE LYS ARG VAL TYR SEQRES 34 A 468 SER LEU PHE LEU ASP GLU SER ARG SER THR GLN TYR MET SEQRES 35 A 468 LYS GLU TYR GLN ASP ALA PHE LEU PHE ASN GLU LEU LYS SEQRES 36 A 468 GLY GLU THR MET ASP THR SER LEU GLU VAL LEU PHE GLN HET MG A1001 1 HET MG A1002 1 HET MG A1003 1 HET MG A1004 1 HET GOL A1005 6 HET EDO A1006 4 HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG 4(MG 2+) FORMUL 6 GOL C3 H8 O3 FORMUL 7 EDO C2 H6 O2 FORMUL 8 HOH *59(H2 O) HELIX 1 AA1 GLN A 49 GLY A 66 1 18 HELIX 2 AA2 GLY A 82 GLY A 95 1 14 HELIX 3 AA3 SER A 106 PHE A 109 5 4 HELIX 4 AA4 SER A 114 SER A 126 1 13 HELIX 5 AA5 GLY A 175 LYS A 184 1 10 HELIX 6 AA6 LEU A 244 SER A 252 1 9 HELIX 7 AA7 LYS A 269 GLY A 287 1 19 HELIX 8 AA8 GLU A 300 LEU A 304 5 5 HELIX 9 AA9 ASP A 305 SER A 318 1 14 HELIX 10 AB1 PRO A 347 ASP A 352 1 6 HELIX 11 AB2 SER A 363 GLU A 378 1 16 HELIX 12 AB3 SER A 383 THR A 397 1 15 HELIX 13 AB4 SER A 398 ARG A 416 1 19 HELIX 14 AB5 GLN A 422 PHE A 433 1 12 HELIX 15 AB6 ASP A 435 GLN A 441 1 7 HELIX 16 AB7 TYR A 442 LEU A 455 1 14 SHEET 1 AA1 5 PHE A 100 ALA A 104 0 SHEET 2 AA1 5 VAL A 295 ASP A 299 1 O PHE A 297 N ILE A 103 SHEET 3 AA1 5 VAL A 323 THR A 328 1 O ILE A 325 N LEU A 296 SHEET 4 AA1 5 ALA A 72 GLY A 77 1 N VAL A 73 O MET A 326 SHEET 5 AA1 5 LEU A 354 THR A 359 1 O VAL A 357 N ALA A 76 SHEET 1 AA2 3 VAL A 192 THR A 194 0 SHEET 2 AA2 3 ILE A 127 GLU A 139 -1 N ILE A 138 O ILE A 193 SHEET 3 AA2 3 GLN A 233 SER A 243 -1 O HIS A 240 N ILE A 131 SHEET 1 AA3 3 VAL A 192 THR A 194 0 SHEET 2 AA3 3 ILE A 127 GLU A 139 -1 N ILE A 138 O ILE A 193 SHEET 3 AA3 3 GLU A 290 PRO A 293 -1 O ILE A 292 N GLY A 128 SHEET 1 AA4 3 GLU A 141 GLN A 146 0 SHEET 2 AA4 3 GLY A 159 LYS A 164 -1 O LYS A 164 N GLU A 141 SHEET 3 AA4 3 GLU A 169 LEU A 174 -1 O LEU A 174 N GLY A 159 SHEET 1 AA5 2 ILE A 332 ARG A 334 0 SHEET 2 AA5 2 GLN A 341 PRO A 343 -1 O SER A 342 N THR A 333 LINK OG SER A 398 MG MG A1002 1555 1555 2.87 LINK MG MG A1001 O HOH A1118 1555 1555 3.00 LINK MG MG A1003 O HOH A1138 1555 1555 2.97 LINK MG MG A1004 O HOH A1150 1555 1555 2.38 CISPEP 1 GLY A 190 ASP A 191 0 -0.10 CISPEP 2 CYS A 227 PRO A 228 0 -1.99 SITE 1 AC1 2 ASP A 305 HOH A1118 SITE 1 AC2 3 SER A 398 ARG A 400 GLU A 436 SITE 1 AC3 5 GLY A 80 THR A 81 GLY A 82 LYS A 83 SITE 2 AC3 5 HOH A1138 SITE 1 AC4 3 THR A 360 ASP A 366 HOH A1150 SITE 1 AC5 2 GLN A 44 ARG A 53 SITE 1 AC6 5 VAL A 357 SER A 358 SER A 431 LEU A 432 SITE 2 AC6 5 LEU A 434 CRYST1 122.961 122.961 60.874 90.00 90.00 120.00 P 6 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008133 0.004695 0.000000 0.00000 SCALE2 0.000000 0.009391 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016427 0.00000