HEADER TRANSCRIPTION 21-FEB-17 5N7Y TITLE SOLUTION STRUCTURE OF B. SUBTILIS SIGMA G INHIBITOR CSFB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-SIGMA-G FACTOR GIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: PROTEIN CSFB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: CSFB, GIN, YAAM, BSU00240; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ZINC-FINGER, DIMER, CSFB, SIGMA G INHIBITOR, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.MARTINEZ-LUMBRERAS,C.ALFANO,A.ATKINSON,R.L.ISAACSON REVDAT 5 14-JUN-23 5N7Y 1 REMARK LINK REVDAT 4 08-MAY-19 5N7Y 1 REMARK REVDAT 3 11-APR-18 5N7Y 1 JRNL REVDAT 2 21-MAR-18 5N7Y 1 JRNL REMARK ATOM REVDAT 1 28-FEB-18 5N7Y 0 JRNL AUTH S.MARTINEZ-LUMBRERAS,C.ALFANO,N.J.EVANS,K.M.COLLINS, JRNL AUTH 2 K.A.FLANAGAN,R.A.ATKINSON,E.M.KRYSZTOFINSKA,A.VYDYANATH, JRNL AUTH 3 J.JACKTER,S.FIXON-OWOO,A.H.CAMP,R.L.ISAACSON JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO BACILLUS SUBTILIS JRNL TITL 2 SIGMA FACTOR INHIBITOR, CSFB. JRNL REF STRUCTURE V. 26 640 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 29526435 JRNL DOI 10.1016/J.STR.2018.02.007 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.3, ARIA 2.3 REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), LINGE, REMARK 3 O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200002323. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 250 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 CSFB-LABELLED, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 CSFB-LABELLED, 0.5 MM CSFB, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HNCO; 3D HCCH- REMARK 210 TOCSY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; 3D FILTERED/ REMARK 210 EDITED 1H-13C NOESY ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 950 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, CCPNMR REMARK 210 ANALYSIS 2.4, TALOS + REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 -49.99 -162.43 REMARK 500 1 VAL A 5 -76.76 -83.86 REMARK 500 1 LYS A 6 155.68 69.00 REMARK 500 1 LEU A 7 -70.64 -64.60 REMARK 500 1 TYR A 25 -98.76 -99.90 REMARK 500 1 THR A 42 43.47 -71.17 REMARK 500 1 SER A 43 39.88 -145.31 REMARK 500 1 ASP C 2 -49.81 -162.08 REMARK 500 1 VAL C 5 -76.88 -84.13 REMARK 500 1 LYS C 6 155.74 69.10 REMARK 500 1 LEU C 7 -70.83 -64.54 REMARK 500 1 LEU C 24 -70.15 -85.81 REMARK 500 1 TYR C 25 -98.92 -99.71 REMARK 500 1 THR C 42 43.63 -70.98 REMARK 500 1 SER C 43 39.43 -145.45 REMARK 500 2 MET A 1 37.32 -156.77 REMARK 500 2 GLU A 3 -73.08 -106.45 REMARK 500 2 THR A 4 92.07 51.22 REMARK 500 2 VAL A 5 32.73 -99.68 REMARK 500 2 LYS A 6 -75.24 73.40 REMARK 500 2 ASP A 15 40.14 72.09 REMARK 500 2 TYR A 25 -108.63 65.61 REMARK 500 2 THR A 42 44.89 -71.37 REMARK 500 2 SER A 43 99.21 71.66 REMARK 500 2 TYR A 47 54.52 -107.25 REMARK 500 2 MET C 1 37.45 -157.09 REMARK 500 2 GLU C 3 -73.09 -106.56 REMARK 500 2 THR C 4 92.14 51.17 REMARK 500 2 VAL C 5 32.86 -99.69 REMARK 500 2 LYS C 6 -75.08 73.29 REMARK 500 2 ASP C 15 40.27 71.76 REMARK 500 2 TYR C 25 -108.58 65.58 REMARK 500 2 THR C 42 44.96 -71.35 REMARK 500 2 SER C 43 99.16 71.67 REMARK 500 2 TYR C 47 54.52 -107.29 REMARK 500 3 GLU A 3 94.18 178.24 REMARK 500 3 THR A 4 -66.92 -154.07 REMARK 500 3 LEU A 7 -102.27 53.68 REMARK 500 3 VAL A 12 -17.47 -49.30 REMARK 500 3 ASP A 15 40.90 72.92 REMARK 500 3 TYR A 25 -114.02 62.98 REMARK 500 3 SER A 43 43.50 -91.21 REMARK 500 3 ASP A 44 -54.59 -129.95 REMARK 500 3 GLU C 3 94.38 178.47 REMARK 500 3 THR C 4 -66.96 -154.17 REMARK 500 3 LEU C 7 -102.21 53.73 REMARK 500 3 VAL C 12 -17.58 -49.15 REMARK 500 3 ASP C 15 40.98 72.61 REMARK 500 3 TYR C 25 -114.36 62.94 REMARK 500 3 SER C 43 43.83 -91.53 REMARK 500 REMARK 500 THIS ENTRY HAS 277 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 11 SG REMARK 620 2 CYS A 14 SG 110.5 REMARK 620 3 CYS A 30 SG 107.1 113.7 REMARK 620 4 CYS A 33 SG 109.4 107.2 108.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 11 SG REMARK 620 2 CYS C 14 SG 110.6 REMARK 620 3 CYS C 30 SG 107.1 112.4 REMARK 620 4 CYS C 33 SG 110.0 107.6 109.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34102 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF B. SUBTILIS SIGMA G INHIBITOR CSFB DBREF 5N7Y A 1 48 UNP P37534 GIN_BACSU 1 48 DBREF 5N7Y C 1 48 UNP P37534 GIN_BACSU 1 48 SEQADV 5N7Y SER A 0 UNP P37534 EXPRESSION TAG SEQADV 5N7Y SER C 0 UNP P37534 EXPRESSION TAG SEQRES 1 A 49 SER MET ASP GLU THR VAL LYS LEU ASN HIS THR CYS VAL SEQRES 2 A 49 ILE CYS ASP GLN GLU LYS ASN ARG GLY ILE HIS LEU TYR SEQRES 3 A 49 THR LYS PHE ILE CYS LEU ASP CYS GLU ARG LYS VAL ILE SEQRES 4 A 49 SER THR SER THR SER ASP PRO ASP TYR ALA SEQRES 1 C 49 SER MET ASP GLU THR VAL LYS LEU ASN HIS THR CYS VAL SEQRES 2 C 49 ILE CYS ASP GLN GLU LYS ASN ARG GLY ILE HIS LEU TYR SEQRES 3 C 49 THR LYS PHE ILE CYS LEU ASP CYS GLU ARG LYS VAL ILE SEQRES 4 C 49 SER THR SER THR SER ASP PRO ASP TYR ALA HET ZN A 101 1 HET ZN C 101 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) HELIX 1 AA1 LEU A 31 SER A 41 1 11 HELIX 2 AA2 LEU C 31 SER C 41 1 11 SHEET 1 AA1 2 HIS A 9 THR A 10 0 SHEET 2 AA1 2 GLU A 17 LYS A 18 -1 O LYS A 18 N HIS A 9 SHEET 1 AA2 2 GLY A 21 ILE A 22 0 SHEET 2 AA2 2 ILE A 29 CYS A 30 -1 O ILE A 29 N ILE A 22 SHEET 1 AA3 2 HIS C 9 THR C 10 0 SHEET 2 AA3 2 GLU C 17 LYS C 18 -1 O LYS C 18 N HIS C 9 SHEET 1 AA4 2 GLY C 21 ILE C 22 0 SHEET 2 AA4 2 ILE C 29 CYS C 30 -1 O ILE C 29 N ILE C 22 LINK SG CYS A 11 ZN ZN A 101 1555 1555 2.31 LINK SG CYS A 14 ZN ZN A 101 1555 1555 2.31 LINK SG CYS A 30 ZN ZN A 101 1555 1555 2.30 LINK SG CYS A 33 ZN ZN A 101 1555 1555 2.30 LINK SG CYS C 11 ZN ZN C 101 1555 1555 2.31 LINK SG CYS C 14 ZN ZN C 101 1555 1555 2.31 LINK SG CYS C 30 ZN ZN C 101 1555 1555 2.29 LINK SG CYS C 33 ZN ZN C 101 1555 1555 2.30 SITE 1 AC1 6 CYS A 11 ILE A 13 CYS A 14 CYS A 30 SITE 2 AC1 6 CYS A 33 TYR C 25 SITE 1 AC2 6 TYR A 25 CYS C 11 ILE C 13 CYS C 14 SITE 2 AC2 6 CYS C 30 CYS C 33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1