HEADER SIGNALING PROTEIN 24-FEB-17 5N8V TITLE TARGETING THE PEX14-PEX5 INTERACTION BY SMALL MOLECULES PROVIDES NOVEL TITLE 2 THERAPEUTIC ROUTES TO TREAT TRYPANOSOMIASES. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXIN 14; COMPND 3 CHAIN: A, B, D, F; COMPND 4 FRAGMENT: NP RESIDUES 20-84; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 3 ORGANISM_TAXID: 5702; SOURCE 4 GENE: PEX14; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRYPANOSOMIASIS, GLYCOSOME, PROTEIN-PROTEIN INTERACTION INHIBITOR, KEYWDS 2 STRUCTURE-BASED DRUG DISCOVERY, INHIBITOR, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.DAWIDOWSKI,L.EMMANOUILIDIS,M.SATTLER,G.M.POPOWICZ REVDAT 2 26-APR-17 5N8V 1 JRNL REVDAT 1 15-MAR-17 5N8V 0 JRNL AUTH M.DAWIDOWSKI,L.EMMANOUILIDIS,V.C.KALEL,K.TRIPSIANES, JRNL AUTH 2 K.SCHORPP,K.HADIAN,M.KAISER,P.MASER,M.KOLONKO,S.TANGHE, JRNL AUTH 3 A.RODRIGUEZ,W.SCHLIEBS,R.ERDMANN,M.SATTLER,G.M.POPOWICZ JRNL TITL INHIBITORS OF PEX14 DISRUPT PROTEIN IMPORT INTO GLYCOSOMES JRNL TITL 2 AND KILL TRYPANOSOMA PARASITES. JRNL REF SCIENCE V. 355 1416 2017 JRNL REFN ESSN 1095-9203 JRNL PMID 28360328 JRNL DOI 10.1126/SCIENCE.AAL1807 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 41737 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3011 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 169 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1984 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 204 REMARK 3 SOLVENT ATOMS : 232 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66000 REMARK 3 B22 (A**2) : 1.99000 REMARK 3 B33 (A**2) : -0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.45000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.754 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2232 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2159 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3000 ; 1.239 ; 2.096 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4977 ; 0.920 ; 3.018 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 4.341 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;29.529 ;22.289 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 414 ;11.872 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;13.539 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 330 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2352 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 470 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1010 ; 0.924 ; 2.560 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1009 ; 0.922 ; 2.559 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1257 ; 0.912 ; 3.825 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1258 ; 0.912 ; 3.827 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1222 ; 1.367 ; 2.914 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1222 ; 1.367 ; 2.914 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1741 ; 1.170 ; 4.234 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2765 ; 1.515 ;31.284 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2696 ; 1.373 ;30.511 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4390 ; 0.684 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 125 ;10.369 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4467 ; 2.594 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5N8V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003704. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44009 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.549 REMARK 200 RESOLUTION RANGE LOW (A) : 37.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.02900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM SULFATE 0.1M BIS TRIS REMARK 280 PROPANE PH 7.5 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 58.03000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 TRP A 1 REMARK 465 HIS A 2 REMARK 465 THR A 3 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 MET B 0 REMARK 465 TRP B 1 REMARK 465 HIS B 2 REMARK 465 THR B 3 REMARK 465 GLY D -2 REMARK 465 ALA D -1 REMARK 465 MET D 0 REMARK 465 TRP D 1 REMARK 465 HIS D 2 REMARK 465 THR D 3 REMARK 465 GLY F -2 REMARK 465 ALA F -1 REMARK 465 MET F 0 REMARK 465 TRP F 1 REMARK 465 HIS F 2 REMARK 465 THR F 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 4 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 36 NZ REMARK 470 PHE A 49 CE2 REMARK 470 HIS B 4 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 36 NZ REMARK 470 HIS D 4 CG ND1 CD2 CE1 NE2 REMARK 470 GLU D 6 CD OE1 OE2 REMARK 470 HIS F 4 CG ND1 CD2 CE1 NE2 REMARK 470 GLU F 6 CG CD OE1 OE2 REMARK 470 LYS F 9 CG CD CE NZ REMARK 470 LYS F 36 NZ REMARK 470 LYS F 62 NZ REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 261 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH D 270 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH D 271 DISTANCE = 7.56 ANGSTROMS REMARK 525 HOH F 253 DISTANCE = 5.97 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KZZ A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KZZ B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KZZ D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME D 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KZZ F 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME F 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5L8A RELATED DB: PDB REMARK 900 SAME PROTEIN WITH SIMILAR INHIBITOR. REMARK 900 RELATED ID: 5L87 RELATED DB: PDB REMARK 900 SAME PROTEIN WITH SIMILAR INHIBITOR. DBREF 5N8V A 2 66 UNP Q8IEW2 Q8IEW2_TRYBB 20 84 DBREF 5N8V B 2 66 UNP Q8IEW2 Q8IEW2_TRYBB 20 84 DBREF 5N8V D 2 66 UNP Q8IEW2 Q8IEW2_TRYBB 20 84 DBREF 5N8V F 2 66 UNP Q8IEW2 Q8IEW2_TRYBB 20 84 SEQADV 5N8V GLY A -2 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V ALA A -1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V MET A 0 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V TRP A 1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V GLY B -2 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V ALA B -1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V MET B 0 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V TRP B 1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V GLY D -2 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V ALA D -1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V MET D 0 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V TRP D 1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V GLY F -2 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V ALA F -1 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V MET F 0 UNP Q8IEW2 EXPRESSION TAG SEQADV 5N8V TRP F 1 UNP Q8IEW2 EXPRESSION TAG SEQRES 1 A 69 GLY ALA MET TRP HIS THR HIS SER GLU ARG GLU LYS ARG SEQRES 2 A 69 VAL SER ASN ALA VAL GLU PHE LEU LEU ASP SER ARG VAL SEQRES 3 A 69 ARG ARG THR PRO THR SER SER LYS VAL HIS PHE LEU LYS SEQRES 4 A 69 SER LYS GLY LEU SER ALA GLU GLU ILE CYS GLU ALA PHE SEQRES 5 A 69 THR LYS VAL GLY GLN PRO LYS THR LEU ASN GLU ILE LYS SEQRES 6 A 69 ARG ILE LEU SER SEQRES 1 B 69 GLY ALA MET TRP HIS THR HIS SER GLU ARG GLU LYS ARG SEQRES 2 B 69 VAL SER ASN ALA VAL GLU PHE LEU LEU ASP SER ARG VAL SEQRES 3 B 69 ARG ARG THR PRO THR SER SER LYS VAL HIS PHE LEU LYS SEQRES 4 B 69 SER LYS GLY LEU SER ALA GLU GLU ILE CYS GLU ALA PHE SEQRES 5 B 69 THR LYS VAL GLY GLN PRO LYS THR LEU ASN GLU ILE LYS SEQRES 6 B 69 ARG ILE LEU SER SEQRES 1 D 69 GLY ALA MET TRP HIS THR HIS SER GLU ARG GLU LYS ARG SEQRES 2 D 69 VAL SER ASN ALA VAL GLU PHE LEU LEU ASP SER ARG VAL SEQRES 3 D 69 ARG ARG THR PRO THR SER SER LYS VAL HIS PHE LEU LYS SEQRES 4 D 69 SER LYS GLY LEU SER ALA GLU GLU ILE CYS GLU ALA PHE SEQRES 5 D 69 THR LYS VAL GLY GLN PRO LYS THR LEU ASN GLU ILE LYS SEQRES 6 D 69 ARG ILE LEU SER SEQRES 1 F 69 GLY ALA MET TRP HIS THR HIS SER GLU ARG GLU LYS ARG SEQRES 2 F 69 VAL SER ASN ALA VAL GLU PHE LEU LEU ASP SER ARG VAL SEQRES 3 F 69 ARG ARG THR PRO THR SER SER LYS VAL HIS PHE LEU LYS SEQRES 4 F 69 SER LYS GLY LEU SER ALA GLU GLU ILE CYS GLU ALA PHE SEQRES 5 F 69 THR LYS VAL GLY GLN PRO LYS THR LEU ASN GLU ILE LYS SEQRES 6 F 69 ARG ILE LEU SER HET KZZ A 101 39 HET SO4 A 102 5 HET SO4 A 103 5 HET SO4 A 104 5 HET BME A 105 4 HET CL A 106 1 HET KZZ B 101 39 HET SO4 B 102 5 HET BME B 103 4 HET CL B 104 1 HET KZZ D 101 39 HET SO4 D 102 5 HET SO4 D 103 5 HET BME D 104 4 HET KZZ F 101 39 HET BME F 102 4 HETNAM KZZ 1-(2-AZANYLETHYL)-5-[(4-METHOXYNAPHTHALEN-1-YL)METHYL]- HETNAM 2 KZZ ~{N}-(NAPHTHALEN-1-YLMETHYL)-6,7-DIHYDRO-4~{H}- HETNAM 3 KZZ PYRAZOLO[4,3-C]PYRIDINE-3-CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM BME BETA-MERCAPTOETHANOL HETNAM CL CHLORIDE ION FORMUL 5 KZZ 4(C32 H33 N5 O2) FORMUL 6 SO4 6(O4 S 2-) FORMUL 9 BME 4(C2 H6 O S) FORMUL 10 CL 2(CL 1-) FORMUL 21 HOH *232(H2 O) HELIX 1 AA1 SER A 5 ASP A 20 1 16 HELIX 2 AA2 ASP A 20 ARG A 25 1 6 HELIX 3 AA3 PRO A 27 LYS A 38 1 12 HELIX 4 AA4 SER A 41 VAL A 52 1 12 HELIX 5 AA5 THR A 57 SER A 66 1 10 HELIX 6 AA6 SER B 5 LEU B 19 1 15 HELIX 7 AA7 ASP B 20 ARG B 25 1 6 HELIX 8 AA8 PRO B 27 LYS B 38 1 12 HELIX 9 AA9 SER B 41 VAL B 52 1 12 HELIX 10 AB1 THR B 57 SER B 66 1 10 HELIX 11 AB2 SER D 5 ASP D 20 1 16 HELIX 12 AB3 ASP D 20 ARG D 25 1 6 HELIX 13 AB4 PRO D 27 LYS D 38 1 12 HELIX 14 AB5 SER D 41 VAL D 52 1 12 HELIX 15 AB6 THR D 57 SER D 66 1 10 HELIX 16 AB7 SER F 5 LEU F 19 1 15 HELIX 17 AB8 ASP F 20 ARG F 25 1 6 HELIX 18 AB9 PRO F 27 LYS F 38 1 12 HELIX 19 AC1 SER F 41 VAL F 52 1 12 HELIX 20 AC2 THR F 57 SER F 66 1 10 SITE 1 AC1 14 ASN A 13 GLU A 16 PHE A 17 THR A 26 SITE 2 AC1 14 PHE A 34 LEU A 35 LYS A 38 HOH A 225 SITE 3 AC1 14 HOH A 229 HOH A 232 HOH A 243 HIS F 33 SITE 4 AC1 14 PHE F 34 KZZ F 101 SITE 1 AC2 7 SER A 5 GLU A 6 HOH A 204 HOH A 223 SITE 2 AC2 7 HOH A 241 SER B 41 ALA B 42 SITE 1 AC3 7 SER A 41 ALA A 42 HOH A 230 HOH A 235 SITE 2 AC3 7 HOH A 244 SER B 5 GLU B 6 SITE 1 AC4 5 PRO A 27 THR A 28 HOH A 201 HOH A 206 SITE 2 AC4 5 HOH A 214 SITE 1 AC5 3 GLU A 43 CYS A 46 HOH A 257 SITE 1 AC6 2 HIS A 33 ARG F 25 SITE 1 AC7 14 ASN B 13 GLU B 16 PHE B 17 THR B 26 SITE 2 AC7 14 PHE B 34 LEU B 35 LYS B 38 HOH B 210 SITE 3 AC7 14 HOH B 227 HOH B 230 HIS D 33 PHE D 34 SITE 4 AC7 14 KZZ D 101 HOH D 267 SITE 1 AC8 6 THR B 57 ASN B 59 ARG B 63 HOH B 236 SITE 2 AC8 6 BME D 104 HOH D 244 SITE 1 AC9 3 GLU B 43 CYS B 46 THR B 50 SITE 1 AD1 1 THR B 28 SITE 1 AD2 14 SER B 30 HIS B 33 PHE B 34 SER B 37 SITE 2 AD2 14 KZZ B 101 ASN D 13 GLU D 16 PHE D 17 SITE 3 AD2 14 THR D 26 PHE D 34 LEU D 35 LYS D 38 SITE 4 AD2 14 HOH D 216 HOH D 232 SITE 1 AD3 6 PRO D 27 THR D 28 SER D 29 HOH D 203 SITE 2 AD3 6 HOH D 208 HOH D 224 SITE 1 AD4 6 THR D 57 ASN D 59 ARG D 63 HOH D 205 SITE 2 AD4 6 HOH D 212 HOH D 225 SITE 1 AD5 5 THR B 57 SO4 B 102 CYS D 46 GLU D 47 SITE 2 AD5 5 THR D 50 SITE 1 AD6 16 HIS A 33 PHE A 34 SER A 37 KZZ A 101 SITE 2 AD6 16 ASN F 13 ALA F 14 GLU F 16 PHE F 17 SITE 3 AD6 16 ARG F 22 THR F 26 PHE F 34 LEU F 35 SITE 4 AD6 16 LYS F 38 HOH F 226 HOH F 227 HOH F 237 SITE 1 AD7 3 ASN A 59 CYS F 46 HOH F 209 CRYST1 35.760 116.060 38.820 90.00 101.86 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027964 0.000000 0.005874 0.00000 SCALE2 0.000000 0.008616 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026322 0.00000