HEADER CELL ADHESION 03-MAR-17 5NC7 TITLE ENAH EVH1 IN COMPLEX WITH AC-WPPPPTEDEL-NH2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ENABLED HOMOLOG; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: S2A, L68A, AND R84A ARE MUTATED FOR MODELLING AS ONLY COMPND 6 THE BACKBONE WAS VISIBLE; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ACTA-DERIVED 10-MER AC-FPPPPTEDEL-NH2 WITH ACETYLATED (AC) COMPND 9 AND AMIDATED (NH2) TERMINI. PHE IS SUBSTITUED BY TRP TO INCREASE COMPND 10 AFFINITY FOR CRYSTALLIZATION; COMPND 11 CHAIN: K, I, J, L, Z, X, Y, W; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: TERMINI NOT RESOLVED IN ELECTROSTATIC BINDING SITE COMPND 14 (CHAINS W-Z) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ENAH, MENA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 12 ORGANISM_TAXID: 1639 KEYWDS PROLINE-RICH MOTIF, ACTA, PROTEIN-PROTEIN INTERACTION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR M.BARONE,Y.ROSKE REVDAT 4 31-JAN-24 5NC7 1 REMARK REVDAT 3 26-OCT-22 5NC7 1 JRNL REMARK REVDAT 2 25-NOV-20 5NC7 1 JRNL REVDAT 1 21-MAR-18 5NC7 0 JRNL AUTH M.BARONE,M.MULLER,S.CHIHA,J.REN,D.ALBAT,A.SOICKE,S.DOHMEN, JRNL AUTH 2 M.KLEIN,J.BRUNS,M.VAN DINTHER,R.OPITZ,P.LINDEMANN, JRNL AUTH 3 M.BEERBAUM,K.MOTZNY,Y.ROSKE,P.SCHMIEDER,R.VOLKMER,M.NAZARE, JRNL AUTH 4 U.HEINEMANN,H.OSCHKINAT,P.TEN DIJKE,H.G.SCHMALZ,R.KUHNE JRNL TITL DESIGNED NANOMOLAR SMALL-MOLECULE INHIBITORS OF ENA/VASP JRNL TITL 2 EVH1 INTERACTION IMPAIR INVASION AND EXTRAVASATION OF BREAST JRNL TITL 3 CANCER CELLS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 29684 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 33184177 JRNL DOI 10.1073/PNAS.2007213117 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.OPITZ,M.MUELLER,C.REUTER,M.BARONE,A.SOICKE,Y.ROSKE, REMARK 1 AUTH 2 K.PIOTUKH,P.HUY,M.BEERBAUM,B.WIESNER,M.BEYERMANN, REMARK 1 AUTH 3 P.SCHMIEDER,C.FREUND,R.VOLKMER,H.OSCHKINAT,H.G.SCHMALZ, REMARK 1 AUTH 4 R.KUEHNE REMARK 1 TITL A MODULAR TOOLKIT TO INHIBIT PROLINE-RICH MOTIF-MEDIATED REMARK 1 TITL 2 PROTEIN-PROTEIN INTERACTIONS. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 112 5011 2015 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ESSN 1091-6490 REMARK 1 PMID 25848013 REMARK 1 DOI 10.1073/PNAS.1422054112 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 20204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3445 - 5.1631 1.00 2884 152 0.2054 0.2557 REMARK 3 2 5.1631 - 4.0988 1.00 2750 145 0.1603 0.1990 REMARK 3 3 4.0988 - 3.5809 1.00 2754 145 0.1862 0.2568 REMARK 3 4 3.5809 - 3.2536 1.00 2708 143 0.2233 0.3083 REMARK 3 5 3.2536 - 3.0204 1.00 2726 143 0.2465 0.2912 REMARK 3 6 3.0204 - 2.8423 1.00 2659 140 0.2834 0.4386 REMARK 3 7 2.8423 - 2.7000 1.00 2712 143 0.3134 0.3808 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4099 REMARK 3 ANGLE : 1.102 5583 REMARK 3 CHIRALITY : 0.058 580 REMARK 3 PLANARITY : 0.008 748 REMARK 3 DIHEDRAL : 8.766 2418 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 3 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): -35.8466 9.0393 36.2270 REMARK 3 T TENSOR REMARK 3 T11: 0.1123 T22: -0.0690 REMARK 3 T33: 0.1349 T12: -0.0267 REMARK 3 T13: 0.0326 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 0.0042 L22: 0.0055 REMARK 3 L33: 0.0012 L12: -0.0074 REMARK 3 L13: -0.0037 L23: -0.0002 REMARK 3 S TENSOR REMARK 3 S11: 0.0427 S12: 0.0299 S13: 0.0127 REMARK 3 S21: -0.0029 S22: 0.0181 S23: 0.0201 REMARK 3 S31: -0.0026 S32: 0.0227 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 2 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): -58.2401 26.0216 36.0776 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: -0.2849 REMARK 3 T33: 0.0568 T12: -0.0164 REMARK 3 T13: -0.0168 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: -0.0013 L22: 0.0014 REMARK 3 L33: 0.0011 L12: -0.0043 REMARK 3 L13: 0.0063 L23: 0.0002 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: 0.0375 S13: -0.0175 REMARK 3 S21: -0.0126 S22: -0.0134 S23: -0.0225 REMARK 3 S31: -0.0141 S32: -0.0279 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 2 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6667 4.9897 17.7948 REMARK 3 T TENSOR REMARK 3 T11: 0.1681 T22: 0.3767 REMARK 3 T33: 0.1652 T12: 0.0382 REMARK 3 T13: 0.0421 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.0074 L22: 0.0000 REMARK 3 L33: 0.0038 L12: 0.0008 REMARK 3 L13: -0.0018 L23: -0.0008 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: 0.0154 S13: 0.0005 REMARK 3 S21: 0.0069 S22: 0.0153 S23: 0.0149 REMARK 3 S31: 0.0122 S32: -0.0017 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 2 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): -80.3768 30.1192 17.8340 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.4064 REMARK 3 T33: 0.2041 T12: 0.0196 REMARK 3 T13: -0.0561 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 0.0089 L22: -0.0012 REMARK 3 L33: 0.0048 L12: -0.0006 REMARK 3 L13: 0.0013 L23: -0.0006 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: 0.0098 S13: -0.0088 REMARK 3 S21: 0.0031 S22: 0.0187 S23: -0.0053 REMARK 3 S31: -0.0097 S32: 0.0041 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003868. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918410, 0.918409 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20211 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.345 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.530 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5N9C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MERGED DATA SET OF CRYSTALS GROWN IN REMARK 280 2.2M AMMONIUM SULFATE, 200MM LITHIUM CHLORIDE AND 2.2M AMMONIUM REMARK 280 SULFATE, 200MM SODIUM NITRATE, PH 7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 93.98000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.21500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 93.98000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.21500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, L, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I, W REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, J, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, K, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 ASP Z 8 REMARK 465 GLU Z 9 REMARK 465 LEU Z 10 REMARK 465 NH2 Z 11 REMARK 465 GLU X 9 REMARK 465 LEU X 10 REMARK 465 NH2 X 11 REMARK 465 ACE Y 0 REMARK 465 TRP Y 1 REMARK 465 THR Y 6 REMARK 465 GLU Y 7 REMARK 465 ASP Y 8 REMARK 465 GLU Y 9 REMARK 465 LEU Y 10 REMARK 465 NH2 Y 11 REMARK 465 ASP W 8 REMARK 465 GLU W 9 REMARK 465 LEU W 10 REMARK 465 NH2 W 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER C 2 OG REMARK 470 LEU C 68 CG CD1 CD2 REMARK 470 ARG C 84 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 68 CG CD1 CD2 REMARK 470 ARG D 84 CG CD NE CZ NH1 NH2 REMARK 470 TRP Z 1 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Z 1 CZ3 CH2 REMARK 470 GLU Z 7 CA C O CB CG CD OE1 REMARK 470 GLU Z 7 OE2 REMARK 470 ASP X 8 CA C O CB CG OD1 OD2 REMARK 470 TRP W 1 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP W 1 CZ3 CH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU B 109 CD REMARK 480 GLU C 109 CD REMARK 480 LYS D 21 CE REMARK 480 GLU D 109 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 51 O PRO X 2 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS C 66 CD - CE - NZ ANGL. DEV. = -15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 74.23 -160.21 REMARK 500 ASP A 82 -162.11 -129.58 REMARK 500 LYS B 21 72.76 51.25 REMARK 500 ASN B 61 76.14 -156.77 REMARK 500 ASP B 82 -165.94 -129.06 REMARK 500 ASN C 61 85.53 -158.21 REMARK 500 ASP C 82 -163.72 -100.42 REMARK 500 LYS D 21 18.12 57.51 REMARK 500 HIS D 56 19.76 58.29 REMARK 500 ASN D 61 75.41 -157.07 REMARK 500 ASP D 82 -160.23 -121.10 REMARK 500 ARG D 84 -62.72 -104.41 REMARK 500 THR X 6 -172.50 55.23 REMARK 500 REMARK 500 REMARK: NULL DBREF 5NC7 A 1 111 UNP Q8N8S7 ENAH_HUMAN 1 111 DBREF 5NC7 B 1 111 UNP Q8N8S7 ENAH_HUMAN 1 111 DBREF 5NC7 C 1 111 UNP Q8N8S7 ENAH_HUMAN 1 111 DBREF 5NC7 D 1 111 UNP Q8N8S7 ENAH_HUMAN 1 111 DBREF 5NC7 K 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 I 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 J 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 L 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 Z 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 X 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 Y 0 11 PDB 5NC7 5NC7 0 11 DBREF 5NC7 W 0 11 PDB 5NC7 5NC7 0 11 SEQADV 5NC7 GLY A -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 SER A 0 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 GLY B -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 SER B 0 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 GLY C -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 SER C 0 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 GLY D -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 5NC7 SER D 0 UNP Q8N8S7 EXPRESSION TAG SEQRES 1 A 113 GLY SER MET SER GLU GLN SER ILE CYS GLN ALA ARG ALA SEQRES 2 A 113 ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP VAL SEQRES 3 A 113 PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS ILE SEQRES 4 A 113 TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL GLY SEQRES 5 A 113 ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS ALA SEQRES 6 A 113 ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN THR SEQRES 7 A 113 PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY LEU SEQRES 8 A 113 ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SER SEQRES 9 A 113 ALA MET MET HIS ALA LEU GLU VAL LEU SEQRES 1 B 113 GLY SER MET SER GLU GLN SER ILE CYS GLN ALA ARG ALA SEQRES 2 B 113 ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP VAL SEQRES 3 B 113 PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS ILE SEQRES 4 B 113 TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL GLY SEQRES 5 B 113 ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS ALA SEQRES 6 B 113 ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN THR SEQRES 7 B 113 PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY LEU SEQRES 8 B 113 ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SER SEQRES 9 B 113 ALA MET MET HIS ALA LEU GLU VAL LEU SEQRES 1 C 113 GLY SER MET SER GLU GLN SER ILE CYS GLN ALA ARG ALA SEQRES 2 C 113 ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP VAL SEQRES 3 C 113 PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS ILE SEQRES 4 C 113 TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL GLY SEQRES 5 C 113 ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS ALA SEQRES 6 C 113 ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN THR SEQRES 7 C 113 PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY LEU SEQRES 8 C 113 ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SER SEQRES 9 C 113 ALA MET MET HIS ALA LEU GLU VAL LEU SEQRES 1 D 113 GLY SER MET SER GLU GLN SER ILE CYS GLN ALA ARG ALA SEQRES 2 D 113 ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP VAL SEQRES 3 D 113 PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS ILE SEQRES 4 D 113 TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL GLY SEQRES 5 D 113 ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS ALA SEQRES 6 D 113 ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN THR SEQRES 7 D 113 PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY LEU SEQRES 8 D 113 ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SER SEQRES 9 D 113 ALA MET MET HIS ALA LEU GLU VAL LEU SEQRES 1 K 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 I 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 J 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 L 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 Z 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 X 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 Y 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 SEQRES 1 W 12 ACE TRP PRO PRO PRO PRO THR GLU ASP GLU LEU NH2 HET ACE K 0 3 HET NH2 K 11 1 HET ACE I 0 3 HET NH2 I 11 1 HET ACE J 0 3 HET NH2 J 11 1 HET ACE L 0 3 HET NH2 L 11 1 HET ACE Z 0 3 HET ACE X 0 3 HET ACE W 0 3 HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP FORMUL 5 ACE 7(C2 H4 O) FORMUL 5 NH2 4(H2 N) FORMUL 13 HOH *4(H2 O) HELIX 1 AA1 SER A 93 LEU A 111 1 19 HELIX 2 AA2 GLY B 27 SER B 29 5 3 HELIX 3 AA3 SER B 93 LEU B 111 1 19 HELIX 4 AA4 GLY C 27 SER C 29 5 3 HELIX 5 AA5 SER C 93 LEU C 111 1 19 HELIX 6 AA6 SER D 93 LEU D 111 1 19 SHEET 1 AA1 5 LYS A 22 PRO A 25 0 SHEET 2 AA1 5 GLN A 4 ASP A 17 -1 N VAL A 15 O VAL A 24 SHEET 3 AA1 5 SER A 33 HIS A 40 -1 O VAL A 35 N ALA A 9 SHEET 4 AA1 5 THR A 45 LYS A 52 -1 O VAL A 49 N HIS A 36 SHEET 5 AA1 5 VAL A 58 ILE A 64 -1 O ILE A 64 N PHE A 46 SHEET 1 AA2 4 LYS A 22 PRO A 25 0 SHEET 2 AA2 4 GLN A 4 ASP A 17 -1 N VAL A 15 O VAL A 24 SHEET 3 AA2 4 VAL A 86 PHE A 91 -1 O GLY A 88 N MET A 14 SHEET 4 AA2 4 PHE A 77 ARG A 81 -1 N TRP A 80 O TYR A 87 SHEET 1 AA3 5 LYS B 22 PRO B 25 0 SHEET 2 AA3 5 GLN B 4 ASP B 17 -1 N ASP B 17 O LYS B 22 SHEET 3 AA3 5 SER B 33 HIS B 40 -1 O SER B 33 N ALA B 11 SHEET 4 AA3 5 THR B 45 LYS B 52 -1 O VAL B 49 N HIS B 36 SHEET 5 AA3 5 VAL B 58 ILE B 64 -1 O CYS B 62 N VAL B 48 SHEET 1 AA4 4 LYS B 22 PRO B 25 0 SHEET 2 AA4 4 GLN B 4 ASP B 17 -1 N ASP B 17 O LYS B 22 SHEET 3 AA4 4 VAL B 86 PHE B 91 -1 O GLY B 88 N MET B 14 SHEET 4 AA4 4 PHE B 77 ARG B 81 -1 N HIS B 78 O LEU B 89 SHEET 1 AA5 5 LYS C 22 PRO C 25 0 SHEET 2 AA5 5 GLU C 3 ASP C 17 -1 N VAL C 15 O VAL C 24 SHEET 3 AA5 5 SER C 33 HIS C 40 -1 O HIS C 39 N GLN C 4 SHEET 4 AA5 5 THR C 45 LYS C 52 -1 O VAL C 49 N HIS C 36 SHEET 5 AA5 5 VAL C 58 ILE C 64 -1 O CYS C 62 N VAL C 48 SHEET 1 AA6 5 LYS C 22 PRO C 25 0 SHEET 2 AA6 5 GLU C 3 ASP C 17 -1 N VAL C 15 O VAL C 24 SHEET 3 AA6 5 VAL C 86 PHE C 91 -1 O GLY C 88 N MET C 14 SHEET 4 AA6 5 PHE C 77 ARG C 81 -1 N HIS C 78 O LEU C 89 SHEET 5 AA6 5 TYR C 70 ASN C 71 -1 N ASN C 71 O GLN C 79 SHEET 1 AA7 5 LYS D 22 PRO D 25 0 SHEET 2 AA7 5 GLU D 3 ASP D 17 -1 N VAL D 15 O VAL D 24 SHEET 3 AA7 5 SER D 33 HIS D 40 -1 O HIS D 39 N GLN D 4 SHEET 4 AA7 5 THR D 45 LYS D 52 -1 O VAL D 49 N HIS D 36 SHEET 5 AA7 5 VAL D 58 ILE D 64 -1 O CYS D 62 N VAL D 48 SHEET 1 AA8 5 LYS D 22 PRO D 25 0 SHEET 2 AA8 5 GLU D 3 ASP D 17 -1 N VAL D 15 O VAL D 24 SHEET 3 AA8 5 VAL D 86 PHE D 91 -1 O GLY D 88 N MET D 14 SHEET 4 AA8 5 PHE D 77 ARG D 81 -1 N HIS D 78 O LEU D 89 SHEET 5 AA8 5 TYR D 70 ASN D 71 -1 N ASN D 71 O GLN D 79 LINK C ACE K 0 N TRP K 1 1555 1555 1.34 LINK C LEU K 10 N NH2 K 11 1555 1555 1.33 LINK C ACE I 0 N TRP I 1 1555 1555 1.33 LINK C LEU I 10 N NH2 I 11 1555 1555 1.33 LINK C ACE J 0 N TRP J 1 1555 1555 1.34 LINK C LEU J 10 N NH2 J 11 1555 1555 1.33 LINK C ACE L 0 N TRP L 1 1555 1555 1.33 LINK C LEU L 10 N NH2 L 11 1555 1555 1.33 LINK C ACE Z 0 N TRP Z 1 1555 1555 1.33 LINK C ACE X 0 N TRP X 1 1555 1555 1.36 LINK C ACE W 0 N TRP W 1 1555 1555 1.33 CISPEP 1 TRP W 1 PRO W 2 0 -9.58 CRYST1 187.960 34.430 110.990 90.00 91.53 90.00 C 1 2 1 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005320 0.000000 0.000142 0.00000 SCALE2 0.000000 0.029044 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009013 0.00000