HEADER OXIDOREDUCTASE 05-MAR-17 5NCH TITLE GRIE APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE HYDROXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: N-TERMINAL STREP-TAG II HAS BEEN REMOVED BY TEV COMPND 6 DIGESTION, CONSTRUCT IS A C-TERMINAL TRUNCATION OF GRIE (RESIDUES 1- COMPND 7 265) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. DSM 40835; SOURCE 3 ORGANISM_TAXID: 1637813; SOURCE 4 GENE: GRIE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS FE(II)/ALPHA-KETOGLUTARATE DEPENDENT DIOXYGENASE, HYDROXYLASE, NON- KEYWDS 2 HEME IRON PROTEIN, LEUCINE HYDROXYLASE, 5-HYDROXYLEUCINE, (2S4R)-5- KEYWDS 3 HYDROXYLEUCINE, 4-METHYL-PROLINE, GRISELIMYCIN, METHYL-GRISELIMYCIN, KEYWDS 4 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.LUKAT,W.BLANKENFELDT,R.MUELLER REVDAT 3 17-JAN-24 5NCH 1 REMARK REVDAT 2 06-DEC-17 5NCH 1 JRNL REVDAT 1 04-OCT-17 5NCH 0 JRNL AUTH P.LUKAT,Y.KATSUYAMA,S.WENZEL,T.BINZ,C.KONIG,W.BLANKENFELDT, JRNL AUTH 2 M.BRONSTRUP,R.MULLER JRNL TITL BIOSYNTHESIS OF METHYL-PROLINE CONTAINING GRISELIMYCINS, JRNL TITL 2 NATURAL PRODUCTS WITH ANTI-TUBERCULOSIS ACTIVITY. JRNL REF CHEM SCI V. 8 7521 2017 JRNL REFN ISSN 2041-6520 JRNL PMID 29163906 JRNL DOI 10.1039/C7SC02622F REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2689 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 3 NUMBER OF REFLECTIONS : 46611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4998 - 4.5816 0.99 3265 168 0.1695 0.1727 REMARK 3 2 4.5816 - 3.6373 0.83 2493 121 0.1294 0.1663 REMARK 3 3 3.6373 - 3.1777 0.99 3020 163 0.1492 0.1930 REMARK 3 4 3.1777 - 2.8873 1.00 3242 152 0.1685 0.2259 REMARK 3 5 2.8873 - 2.6804 1.00 3141 222 0.1648 0.2196 REMARK 3 6 2.6804 - 2.5224 0.99 3224 152 0.1776 0.2604 REMARK 3 7 2.5224 - 2.3961 1.00 3205 162 0.1718 0.2026 REMARK 3 8 2.3961 - 2.2918 1.00 3186 164 0.1787 0.2232 REMARK 3 9 2.2918 - 2.2036 0.53 1675 98 0.1915 0.2453 REMARK 3 10 2.2036 - 2.1275 1.00 3189 157 0.1846 0.2409 REMARK 3 11 2.1275 - 2.0610 0.96 1716 80 0.1907 0.2324 REMARK 3 12 2.0610 - 2.0021 0.96 2628 122 0.2036 0.2542 REMARK 3 13 2.0021 - 1.9494 1.00 3187 152 0.1988 0.2377 REMARK 3 14 1.9494 - 1.9018 0.40 1297 77 0.2325 0.2700 REMARK 3 15 1.9018 - 1.8586 0.98 3097 170 0.2603 0.2921 REMARK 3 16 1.8586 - 1.8190 0.85 2745 141 0.2778 0.3085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4144 REMARK 3 ANGLE : 0.810 5664 REMARK 3 CHIRALITY : 0.052 619 REMARK 3 PLANARITY : 0.006 761 REMARK 3 DIHEDRAL : 15.014 2518 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1011 31.2792 89.5758 REMARK 3 T TENSOR REMARK 3 T11: 0.1907 T22: 0.1311 REMARK 3 T33: 0.1475 T12: 0.0053 REMARK 3 T13: 0.0467 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.9379 L22: 1.1686 REMARK 3 L33: 1.0244 L12: -0.7625 REMARK 3 L13: -0.2519 L23: -0.4790 REMARK 3 S TENSOR REMARK 3 S11: -0.0759 S12: -0.0959 S13: -0.1243 REMARK 3 S21: -0.0715 S22: 0.0486 S23: -0.2548 REMARK 3 S31: 0.1783 S32: 0.0741 S33: -0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2318 25.5168 80.6531 REMARK 3 T TENSOR REMARK 3 T11: 0.2372 T22: 0.3972 REMARK 3 T33: 0.2451 T12: -0.0842 REMARK 3 T13: -0.0012 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.8068 L22: 0.4343 REMARK 3 L33: 0.3645 L12: -0.4404 REMARK 3 L13: -0.1722 L23: 0.1323 REMARK 3 S TENSOR REMARK 3 S11: -0.0367 S12: 0.5228 S13: -0.3845 REMARK 3 S21: -0.0853 S22: -0.0449 S23: 0.2419 REMARK 3 S31: 0.4357 S32: -0.3326 S33: -0.0527 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6236 35.6343 90.6989 REMARK 3 T TENSOR REMARK 3 T11: 0.1364 T22: 0.1717 REMARK 3 T33: 0.1493 T12: -0.0228 REMARK 3 T13: 0.0121 T23: 0.0364 REMARK 3 L TENSOR REMARK 3 L11: 1.1527 L22: 1.0915 REMARK 3 L33: 0.7278 L12: -0.1262 REMARK 3 L13: -0.4045 L23: 0.8046 REMARK 3 S TENSOR REMARK 3 S11: -0.0296 S12: 0.0652 S13: 0.0165 REMARK 3 S21: -0.0039 S22: 0.0101 S23: 0.0511 REMARK 3 S31: 0.0232 S32: -0.1535 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7854 39.0655 88.0963 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.1402 REMARK 3 T33: 0.1321 T12: -0.0005 REMARK 3 T13: 0.0010 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.6757 L22: 1.0640 REMARK 3 L33: 1.2035 L12: -0.0048 REMARK 3 L13: -0.4553 L23: -0.0450 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: -0.0040 S13: 0.0028 REMARK 3 S21: -0.1020 S22: 0.0282 S23: 0.0842 REMARK 3 S31: -0.0386 S32: -0.1831 S33: -0.0033 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4628 52.9650 59.6370 REMARK 3 T TENSOR REMARK 3 T11: 0.1339 T22: 0.1503 REMARK 3 T33: 0.1367 T12: -0.0167 REMARK 3 T13: -0.0249 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.5886 L22: 1.0340 REMARK 3 L33: 1.3407 L12: 0.6094 REMARK 3 L13: -0.0579 L23: 0.2083 REMARK 3 S TENSOR REMARK 3 S11: -0.0096 S12: -0.0406 S13: 0.0291 REMARK 3 S21: 0.2806 S22: 0.0418 S23: -0.2109 REMARK 3 S31: -0.1372 S32: 0.1708 S33: 0.0058 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2446 58.6165 51.7080 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.2313 REMARK 3 T33: 0.1867 T12: 0.0450 REMARK 3 T13: -0.0220 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 1.1823 L22: 1.8626 REMARK 3 L33: 1.1342 L12: -0.7070 REMARK 3 L13: 0.0585 L23: 1.2382 REMARK 3 S TENSOR REMARK 3 S11: -0.1222 S12: -0.1841 S13: -0.1943 REMARK 3 S21: -0.0038 S22: -0.1334 S23: 0.3995 REMARK 3 S31: -0.1165 S32: -0.3205 S33: -0.3845 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8100 53.5535 50.1103 REMARK 3 T TENSOR REMARK 3 T11: 0.1564 T22: 0.1162 REMARK 3 T33: 0.1735 T12: -0.0221 REMARK 3 T13: -0.0076 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.2754 L22: 0.8581 REMARK 3 L33: 0.6098 L12: 0.3597 REMARK 3 L13: 0.2695 L23: 0.4761 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: 0.0651 S13: -0.1257 REMARK 3 S21: -0.2280 S22: 0.0523 S23: -0.1849 REMARK 3 S31: -0.1127 S32: -0.0718 S33: 0.0126 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0333 41.3478 53.0425 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.2630 REMARK 3 T33: 0.1807 T12: 0.0042 REMARK 3 T13: 0.0032 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.1043 L22: 1.2059 REMARK 3 L33: 0.5106 L12: 0.0350 REMARK 3 L13: 0.0075 L23: 0.4273 REMARK 3 S TENSOR REMARK 3 S11: 0.1067 S12: -0.1154 S13: -0.0916 REMARK 3 S21: 0.1944 S22: -0.0740 S23: 0.2967 REMARK 3 S31: 0.1326 S32: -0.4599 S33: 0.1092 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 121 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4929 41.4084 55.6732 REMARK 3 T TENSOR REMARK 3 T11: 0.1306 T22: 0.1039 REMARK 3 T33: 0.1179 T12: -0.0043 REMARK 3 T13: -0.0117 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.8638 L22: 0.9917 REMARK 3 L33: 0.3543 L12: -0.1381 REMARK 3 L13: -0.3311 L23: -0.2256 REMARK 3 S TENSOR REMARK 3 S11: -0.0007 S12: 0.0224 S13: -0.0960 REMARK 3 S21: 0.0769 S22: 0.0049 S23: 0.0578 REMARK 3 S31: 0.0553 S32: 0.0204 S33: -0.0006 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6169 30.9724 55.5595 REMARK 3 T TENSOR REMARK 3 T11: 0.2623 T22: 0.3109 REMARK 3 T33: 0.3088 T12: -0.0214 REMARK 3 T13: -0.0182 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 1.0552 L22: 1.0499 REMARK 3 L33: 0.8780 L12: -0.5996 REMARK 3 L13: 0.7002 L23: -0.7944 REMARK 3 S TENSOR REMARK 3 S11: 0.0365 S12: 0.4104 S13: 0.5202 REMARK 3 S21: -0.3099 S22: -0.2992 S23: -0.2434 REMARK 3 S31: 0.3111 S32: 0.0635 S33: -0.0392 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 189 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6918 49.5459 52.2578 REMARK 3 T TENSOR REMARK 3 T11: 0.1482 T22: 0.1177 REMARK 3 T33: 0.0933 T12: 0.0068 REMARK 3 T13: -0.0293 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.6410 L22: 1.4411 REMARK 3 L33: 0.4921 L12: 0.0038 REMARK 3 L13: -0.1094 L23: 0.0971 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.0947 S13: -0.0104 REMARK 3 S21: -0.1373 S22: -0.0139 S23: -0.0002 REMARK 3 S31: -0.0949 S32: -0.0633 S33: -0.0062 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT WITH TLS PARAMETERS & REMARK 3 AUTOMATIC ADDITION OF HYDROGENS IN RIDING POSITIONS. REMARK 4 REMARK 4 5NCH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54183 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46652 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.819 REMARK 200 RESOLUTION RANGE LOW (A) : 98.378 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.71100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ENSEMBLED MODEL FROM: 3EMR, 2A1X, 2FCT, 3GJB, 2OPW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.8 % (W/V) PEG 4000, 0.233 M LISO4, REMARK 280 0.1 M HEPES/NAOH PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.91850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 ARG A 0 REMARK 465 GLY A 104 REMARK 465 LYS A 159 REMARK 465 ALA A 160 REMARK 465 ARG A 161 REMARK 465 GLU A 162 REMARK 465 THR A 163 REMARK 465 SER A 164 REMARK 465 ARG A 165 REMARK 465 SER A 166 REMARK 465 ASP A 167 REMARK 465 GLN A 168 REMARK 465 HIS A 169 REMARK 465 VAL A 170 REMARK 465 ASP A 171 REMARK 465 PRO A 172 REMARK 465 ASP A 173 REMARK 465 ASP A 174 REMARK 465 TYR A 175 REMARK 465 SER A 176 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 ARG B 0 REMARK 465 LYS B 159 REMARK 465 ALA B 160 REMARK 465 ARG B 161 REMARK 465 GLU B 162 REMARK 465 THR B 163 REMARK 465 SER B 164 REMARK 465 ARG B 165 REMARK 465 SER B 166 REMARK 465 ASP B 167 REMARK 465 GLN B 168 REMARK 465 HIS B 169 REMARK 465 VAL B 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 GLU B 187 CG CD OE1 OE2 REMARK 470 GLU B 240 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY B 104 O HOH B 304 1.58 REMARK 500 O HOH B 435 O HOH B 496 1.92 REMARK 500 O HOH B 425 O HOH B 546 1.93 REMARK 500 O HOH A 532 O HOH A 550 2.02 REMARK 500 O HOH B 539 O HOH B 544 2.04 REMARK 500 OE2 GLU A 26 O HOH A 301 2.05 REMARK 500 O HOH A 347 O HOH A 418 2.05 REMARK 500 O HOH A 404 O HOH A 528 2.07 REMARK 500 O HOH A 409 O HOH A 544 2.11 REMARK 500 O HOH B 472 O HOH B 545 2.12 REMARK 500 O HOH B 421 O HOH B 429 2.14 REMARK 500 O HOH A 473 O HOH A 499 2.16 REMARK 500 O HOH B 462 O HOH B 539 2.16 REMARK 500 O HOH B 319 O HOH B 494 2.16 REMARK 500 OE2 GLU A 263 O HOH A 302 2.18 REMARK 500 OD1 ASP A 75 O HOH A 303 2.18 REMARK 500 O HOH A 531 O HOH A 553 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 470 O HOH B 481 2546 2.00 REMARK 500 O HOH B 375 O HOH B 486 1655 2.13 REMARK 500 O HOH A 426 O HOH A 526 2547 2.17 REMARK 500 O HOH B 309 O HOH B 498 2646 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 106 -34.14 -153.21 REMARK 500 PRO A 125 44.34 -84.84 REMARK 500 PRO B 125 43.35 -85.50 REMARK 500 SER B 176 168.51 179.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 558 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 559 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 560 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 561 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A 562 DISTANCE = 7.16 ANGSTROMS REMARK 525 HOH A 563 DISTANCE = 7.42 ANGSTROMS REMARK 525 HOH B 554 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH B 555 DISTANCE = 7.26 ANGSTROMS DBREF1 5NCH A 1 265 UNP A0A0E3URV8_9ACTN DBREF2 5NCH A A0A0E3URV8 1 265 DBREF1 5NCH B 1 265 UNP A0A0E3URV8_9ACTN DBREF2 5NCH B A0A0E3URV8 1 265 SEQADV 5NCH GLY A -2 UNP A0A0E3URV EXPRESSION TAG SEQADV 5NCH GLY A -1 UNP A0A0E3URV EXPRESSION TAG SEQADV 5NCH ARG A 0 UNP A0A0E3URV EXPRESSION TAG SEQADV 5NCH GLY B -2 UNP A0A0E3URV EXPRESSION TAG SEQADV 5NCH GLY B -1 UNP A0A0E3URV EXPRESSION TAG SEQADV 5NCH ARG B 0 UNP A0A0E3URV EXPRESSION TAG SEQRES 1 A 268 GLY GLY ARG MET GLN LEU THR ALA ASP GLN VAL GLU LYS SEQRES 2 A 268 TYR LYS SER ASP GLY TYR VAL LEU LEU GLU GLY ALA PHE SEQRES 3 A 268 SER PRO GLU GLU VAL HIS VAL MET ARG GLN ALA LEU LYS SEQRES 4 A 268 LYS ASP GLN GLU VAL GLN GLY PRO HIS ARG ILE LEU GLU SEQRES 5 A 268 GLU ASP GLY ARG THR VAL ARG ALA LEU TYR ALA SER HIS SEQRES 6 A 268 THR ARG GLN SER VAL PHE ASP GLN LEU SER ARG SER ASP SEQRES 7 A 268 ARG LEU LEU GLY PRO ALA THR GLN LEU LEU GLU CYS ASP SEQRES 8 A 268 LEU TYR ILE HIS GLN PHE LYS ILE ASN THR LYS ARG ALA SEQRES 9 A 268 PHE GLY GLY ASP SER TRP ALA TRP HIS GLN ASP PHE ILE SEQRES 10 A 268 VAL TRP ARG ASP THR ASP GLY LEU PRO ALA PRO ARG ALA SEQRES 11 A 268 VAL ASN VAL GLY VAL PHE LEU SER ASP VAL THR GLU PHE SEQRES 12 A 268 ASN GLY PRO VAL VAL PHE LEU SER GLY SER HIS GLN ARG SEQRES 13 A 268 GLY THR VAL GLU ARG LYS ALA ARG GLU THR SER ARG SER SEQRES 14 A 268 ASP GLN HIS VAL ASP PRO ASP ASP TYR SER MET THR PRO SEQRES 15 A 268 ALA GLU LEU SER GLN MET VAL GLU LYS HIS PRO MET VAL SEQRES 16 A 268 SER PRO LYS ALA ALA SER GLY SER VAL MET LEU PHE HIS SEQRES 17 A 268 PRO GLU ILE ILE HIS GLY SER ALA PRO ASN ILE SER PRO SEQRES 18 A 268 PHE ALA ARG ASP LEU LEU ILE ILE THR TYR ASN ASP VAL SEQRES 19 A 268 ALA ASN ALA PRO LYS PRO ALA GLY GLU PRO ARG PRO GLU SEQRES 20 A 268 TYR VAL ILE GLY ARG ASP THR THR PRO LEU VAL SER ARG SEQRES 21 A 268 SER GLY PRO LEU HIS GLU ALA ALA SEQRES 1 B 268 GLY GLY ARG MET GLN LEU THR ALA ASP GLN VAL GLU LYS SEQRES 2 B 268 TYR LYS SER ASP GLY TYR VAL LEU LEU GLU GLY ALA PHE SEQRES 3 B 268 SER PRO GLU GLU VAL HIS VAL MET ARG GLN ALA LEU LYS SEQRES 4 B 268 LYS ASP GLN GLU VAL GLN GLY PRO HIS ARG ILE LEU GLU SEQRES 5 B 268 GLU ASP GLY ARG THR VAL ARG ALA LEU TYR ALA SER HIS SEQRES 6 B 268 THR ARG GLN SER VAL PHE ASP GLN LEU SER ARG SER ASP SEQRES 7 B 268 ARG LEU LEU GLY PRO ALA THR GLN LEU LEU GLU CYS ASP SEQRES 8 B 268 LEU TYR ILE HIS GLN PHE LYS ILE ASN THR LYS ARG ALA SEQRES 9 B 268 PHE GLY GLY ASP SER TRP ALA TRP HIS GLN ASP PHE ILE SEQRES 10 B 268 VAL TRP ARG ASP THR ASP GLY LEU PRO ALA PRO ARG ALA SEQRES 11 B 268 VAL ASN VAL GLY VAL PHE LEU SER ASP VAL THR GLU PHE SEQRES 12 B 268 ASN GLY PRO VAL VAL PHE LEU SER GLY SER HIS GLN ARG SEQRES 13 B 268 GLY THR VAL GLU ARG LYS ALA ARG GLU THR SER ARG SER SEQRES 14 B 268 ASP GLN HIS VAL ASP PRO ASP ASP TYR SER MET THR PRO SEQRES 15 B 268 ALA GLU LEU SER GLN MET VAL GLU LYS HIS PRO MET VAL SEQRES 16 B 268 SER PRO LYS ALA ALA SER GLY SER VAL MET LEU PHE HIS SEQRES 17 B 268 PRO GLU ILE ILE HIS GLY SER ALA PRO ASN ILE SER PRO SEQRES 18 B 268 PHE ALA ARG ASP LEU LEU ILE ILE THR TYR ASN ASP VAL SEQRES 19 B 268 ALA ASN ALA PRO LYS PRO ALA GLY GLU PRO ARG PRO GLU SEQRES 20 B 268 TYR VAL ILE GLY ARG ASP THR THR PRO LEU VAL SER ARG SEQRES 21 B 268 SER GLY PRO LEU HIS GLU ALA ALA FORMUL 3 HOH *518(H2 O) HELIX 1 AA1 THR A 4 GLY A 15 1 12 HELIX 2 AA2 SER A 24 GLN A 39 1 16 HELIX 3 AA3 SER A 61 ARG A 64 5 4 HELIX 4 AA4 GLN A 65 SER A 74 1 10 HELIX 5 AA5 SER A 74 GLU A 86 1 13 HELIX 6 AA6 ASP A 112 GLY A 121 1 10 HELIX 7 AA7 GLY A 149 GLY A 154 5 6 HELIX 8 AA8 THR A 178 HIS A 189 1 12 HELIX 9 AA9 ALA A 232 ALA A 234 5 3 HELIX 10 AB1 THR B 4 GLY B 15 1 12 HELIX 11 AB2 SER B 24 GLN B 39 1 16 HELIX 12 AB3 SER B 61 ARG B 64 5 4 HELIX 13 AB4 GLN B 65 SER B 74 1 10 HELIX 14 AB5 SER B 74 GLU B 86 1 13 HELIX 15 AB6 ASP B 112 GLY B 121 1 10 HELIX 16 AB7 GLY B 149 GLY B 154 5 6 HELIX 17 AB8 ASP B 171 TYR B 175 5 5 HELIX 18 AB9 THR B 178 HIS B 189 1 12 HELIX 19 AC1 ALA B 232 ALA B 234 5 3 SHEET 1 AA1 7 TYR A 16 LEU A 19 0 SHEET 2 AA1 7 VAL A 201 PHE A 204 -1 O VAL A 201 N LEU A 19 SHEET 3 AA1 7 ALA A 127 PHE A 133 -1 N GLY A 131 O MET A 202 SHEET 4 AA1 7 ARG A 221 ASP A 230 -1 O ILE A 226 N VAL A 130 SHEET 5 AA1 7 LEU A 89 LYS A 99 -1 N LYS A 95 O ILE A 225 SHEET 6 AA1 7 VAL A 55 TYR A 59 -1 N ARG A 56 O THR A 98 SHEET 7 AA1 7 ARG A 46 LEU A 48 -1 N ILE A 47 O ALA A 57 SHEET 1 AA2 4 HIS A 110 GLN A 111 0 SHEET 2 AA2 4 ILE A 209 SER A 212 -1 O HIS A 210 N HIS A 110 SHEET 3 AA2 4 VAL A 144 LEU A 147 -1 N VAL A 145 O GLY A 211 SHEET 4 AA2 4 MET A 191 VAL A 192 -1 O VAL A 192 N PHE A 146 SHEET 1 AA3 7 TYR B 16 LEU B 19 0 SHEET 2 AA3 7 VAL B 201 PHE B 204 -1 O VAL B 201 N LEU B 19 SHEET 3 AA3 7 ALA B 127 PHE B 133 -1 N GLY B 131 O MET B 202 SHEET 4 AA3 7 ARG B 221 ASP B 230 -1 O LEU B 224 N VAL B 132 SHEET 5 AA3 7 LEU B 89 LYS B 99 -1 N ASN B 97 O LEU B 223 SHEET 6 AA3 7 VAL B 55 TYR B 59 -1 N ARG B 56 O THR B 98 SHEET 7 AA3 7 ARG B 46 LEU B 48 -1 N ILE B 47 O ALA B 57 SHEET 1 AA4 4 HIS B 110 GLN B 111 0 SHEET 2 AA4 4 ILE B 209 SER B 212 -1 O HIS B 210 N HIS B 110 SHEET 3 AA4 4 VAL B 144 LEU B 147 -1 N VAL B 145 O GLY B 211 SHEET 4 AA4 4 MET B 191 VAL B 192 -1 O VAL B 192 N PHE B 146 CRYST1 44.365 69.837 98.378 90.00 90.18 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022540 0.000000 0.000070 0.00000 SCALE2 0.000000 0.014319 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010165 0.00000