HEADER HYDROLASE 06-MAR-17 5NCW TITLE STRUCTURE OF THE TRYPSIN INDUCED SERPIN-TYPE PROTEINASE INHIBITOR, TITLE 2 MIROPIN (V367K/K368A MUTANT). COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERPIN-TYPE PROTEINASE INHIBITOR, MIROPIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: THE AMINO-TERMINAL AMINO ACID RESIDUES (GPLGS) ARE COMPND 7 COMING FROM THE CLONING STRATEGY.; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SERPIN-TYPE PROTEINASE INHIBITOR, MIROPIN; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 OTHER_DETAILS: THE AMINO-TERMINAL AMINO ACID RESIDUES (GPLGS) ARE COMPND 14 COMING FROM THE CLONING STRATEGY. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TANNERELLA FORSYTHIA; SOURCE 3 ORGANISM_TAXID: 28112; SOURCE 4 GENE: BFO_3114; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: TANNERELLA FORSYTHIA; SOURCE 10 ORGANISM_TAXID: 28112; SOURCE 11 GENE: BFO_3114; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_VARIANT: ROSETTA KEYWDS SERPIN-TYPE PROTEINASE INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.GOULAS,M.KSIAZEK,I.GARCIA-FERRER,D.MIZGALSKA,J.POTEMPA,X.GOMIS-RUTH REVDAT 5 17-JAN-24 5NCW 1 LINK REVDAT 4 16-OCT-19 5NCW 1 REMARK REVDAT 3 06-SEP-17 5NCW 1 REMARK REVDAT 2 12-JUL-17 5NCW 1 REVDAT 1 24-MAY-17 5NCW 0 JRNL AUTH T.GOULAS,M.KSIAZEK,I.GARCIA-FERRER,A.M.SOCHAJ-GREGORCZYK, JRNL AUTH 2 I.WALIGORSKA,M.WASYLEWSKI,J.POTEMPA,F.X.GOMIS-RUTH JRNL TITL A STRUCTURE-DERIVED SNAP-TRAP MECHANISM OF A MULTISPECIFIC JRNL TITL 2 SERPIN FROM THE DYSBIOTIC HUMAN ORAL MICROBIOME. JRNL REF J. BIOL. CHEM. V. 292 10883 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28512127 JRNL DOI 10.1074/JBC.M117.786533 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 63556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.270 REMARK 3 FREE R VALUE TEST SET COUNT : 807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.5400 - 1.5000 0.98 4509 0 0.2390 0.2280 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57950 REMARK 3 B22 (A**2) : -0.81320 REMARK 3 B33 (A**2) : 1.39270 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3112 REMARK 3 ANGLE : 1.030 4227 REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL 461 REMARK 3 DIHEDRAL : NULL 1514 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|-5 - -1 A|39 - 367} REMARK 3 ORIGIN FOR THE GROUP (A): 14.6519 34.9801 7.4789 REMARK 3 T TENSOR REMARK 3 T11: -0.0019 T22: -0.0012 REMARK 3 T33: -0.0107 T12: -0.0067 REMARK 3 T13: 0.0002 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.5424 L22: 0.6621 REMARK 3 L33: 0.4064 L12: 0.3108 REMARK 3 L13: 0.0318 L23: -0.1461 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: -0.0388 S13: -0.0321 REMARK 3 S21: -0.0004 S22: 0.0037 S23: -0.0629 REMARK 3 S31: 0.0093 S32: -0.0174 S33: -0.0107 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|376 - 408} REMARK 3 ORIGIN FOR THE GROUP (A): 12.0070 21.6435 12.0193 REMARK 3 T TENSOR REMARK 3 T11: 0.0209 T22: -0.0091 REMARK 3 T33: 0.0048 T12: -0.0140 REMARK 3 T13: 0.0009 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 1.0809 L22: 0.0000 REMARK 3 L33: 1.0755 L12: 0.5168 REMARK 3 L13: -0.0132 L23: -0.0633 REMARK 3 S TENSOR REMARK 3 S11: 0.0400 S12: -0.0877 S13: -0.1862 REMARK 3 S21: -0.0146 S22: -0.0263 S23: -0.1077 REMARK 3 S31: 0.0764 S32: 0.0062 S33: -0.0137 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63557 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 84.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.84300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HLE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM SODIUM IODIDE 100 MM BIS-TRIS, REMARK 280 PH 6.5 20% [W/V] POLYETHYLENE GLYCOL 3,350, PH 7.4, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.30000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.19000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.14000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.19000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.30000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.14000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 368 REMARK 465 THR B 369 REMARK 465 SER B 370 REMARK 465 SER B 371 REMARK 465 PRO B 372 REMARK 465 SER B 373 REMARK 465 THR B 374 REMARK 465 THR B 375 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 274 -36.02 -140.34 REMARK 500 LYS A 274 -38.74 -138.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1020 DISTANCE = 5.91 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 70 ND1 REMARK 620 2 HIS A 110 ND1 113.9 REMARK 620 3 HOH A 904 O 92.0 116.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 615 O REMARK 620 2 HOH A 897 O 100.6 REMARK 620 3 HOH A 922 O 95.1 140.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 503 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 739 O REMARK 620 2 HOH A 959 O 108.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 516 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5NCS RELATED DB: PDB REMARK 900 5NCS CONTAINS A MUTANT (V367K/K368A) OF THE SAME PROTEIN AFTER REMARK 900 REACTION WITH TRYPSIN. DBREF 5NCW A 0 328 UNP G8UQY8 G8UQY8_TANFA 63 391 DBREF 5NCW B 368 408 UNP G8UQY8 G8UQY8_TANFA 392 432 SEQADV 5NCW GLY A -5 UNP G8UQY8 EXPRESSION TAG SEQADV 5NCW PRO A -4 UNP G8UQY8 EXPRESSION TAG SEQADV 5NCW LEU A -3 UNP G8UQY8 EXPRESSION TAG SEQADV 5NCW GLY A -2 UNP G8UQY8 EXPRESSION TAG SEQADV 5NCW SER A -1 UNP G8UQY8 EXPRESSION TAG SEQADV 5NCW GLN A 135 UNP G8UQY8 ARG 198 CONFLICT SEQADV 5NCW LYS A 328 UNP G8UQY8 VAL 391 ENGINEERED MUTATION SEQADV 5NCW ALA B 368 UNP G8UQY8 LYS 392 ENGINEERED MUTATION SEQRES 1 A 334 GLY PRO LEU GLY SER GLU LYS ILE GLU LYS ASP ASN ALA SEQRES 2 A 334 PHE ALA PHE ASP LEU LEU GLN THR THR ARG LYS HIS VAL SEQRES 3 A 334 THR GLU ALA ASN VAL PHE ILE SER PRO LEU SER VAL SER SEQRES 4 A 334 MET ALA LEU ASN MET THR LEU ASN GLY ALA ALA GLY VAL SEQRES 5 A 334 THR ALA ASP GLU MET LYS THR ALA LEU ARG GLU THR GLY SEQRES 6 A 334 TYR THR MET GLU ASP ILE ASN GLU TYR SER HIS SER LEU SEQRES 7 A 334 ARG GLU ALA LEU LEU LYS VAL ASP PRO SER THR THR ILE SEQRES 8 A 334 GLY MET ALA ASN SER ILE TRP TYR LYS GLN GLY GLU LEU SEQRES 9 A 334 VAL LYS GLU PRO PHE ILE LEU ALA ASN ARG THR HIS TYR SEQRES 10 A 334 ASP ALA GLU VAL LYS ALA VAL ASP PHE SER SER PRO ALA SEQRES 11 A 334 THR LEU PRO ALA ILE ASN GLY TRP CYS ALA GLN LYS THR SEQRES 12 A 334 ASN ASP LYS ILE THR LYS ILE LEU ASP TYR ILE PRO GLY SEQRES 13 A 334 ASN ALA PHE MET TYR LEU ILE ASN ALA VAL TYR PHE LYS SEQRES 14 A 334 GLY ILE TRP VAL THR GLN PHE LYS LYS SER ASP THR LYS SEQRES 15 A 334 ARG ALA PRO PHE ARG LYS ALA ASP GLY THR THR GLN GLU SEQRES 16 A 334 VAL ASN MET MET ALA GLN LYS SER THR PHE GLY TYR THR SEQRES 17 A 334 THR ASP GLU CYS CYS GLN TYR LEU GLU MET ASP TYR GLY SEQRES 18 A 334 ASN LYS ALA PHE SER MET ILE VAL MET LEU PRO ASN GLU SEQRES 19 A 334 GLY GLN THR THR ARG ASP VAL ILE GLU GLN LEU ASP ASN SEQRES 20 A 334 LYS HIS TRP SER MET ILE ILE LYS GLY ILE ARG PRO THR SEQRES 21 A 334 GLN VAL SER LEU ARG MET PRO ARG PHE LYS THR GLU CYS SEQRES 22 A 334 LYS TYR GLY LEU GLU LYS LYS ILE LEU PRO GLU MET GLY SEQRES 23 A 334 MET ASN VAL PRO PHE THR GLU THR ALA ASP PHE PRO GLY SEQRES 24 A 334 ILE THR ASP ALA ALA ILE PHE ILE SER ARG VAL ILE HIS SEQRES 25 A 334 LYS THR PHE VAL GLN VAL ASP GLU GLU GLY THR GLU ALA SEQRES 26 A 334 ALA ALA VAL THR ALA VAL GLU MET LYS SEQRES 1 B 41 ALA THR SER SER PRO SER THR THR PRO ILE ASN PHE HIS SEQRES 2 B 41 ILE ASN LYS PRO PHE VAL PHE ALA ILE ARG GLU LYS SER SEQRES 3 B 41 THR GLY VAL ILE LEU PHE ILE GLY GLU ILE GLY GLU VAL SEQRES 4 B 41 LYS GLU HET ZN A 501 1 HET ZN A 502 1 HET K A 503 1 HET IOD A 504 1 HET IOD A 505 1 HET IOD A 506 1 HET IOD A 507 1 HET CL A 508 1 HET CL A 509 1 HET CL A 510 1 HET CL A 511 1 HET CL A 512 1 HET CL A 513 1 HET TRS A 514 16 HET GOL A 515 6 HET GOL A 516 12 HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETNAM IOD IODIDE ION HETNAM CL CHLORIDE ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM GOL GLYCEROL HETSYN TRS TRIS BUFFER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 5 K K 1+ FORMUL 6 IOD 4(I 1-) FORMUL 10 CL 6(CL 1-) FORMUL 16 TRS C4 H12 N O3 1+ FORMUL 17 GOL 2(C3 H8 O3) FORMUL 19 HOH *448(H2 O) HELIX 1 AA1 GLY A -2 VAL A 20 1 23 HELIX 2 AA2 SER A 28 ASN A 41 1 14 HELIX 3 AA3 ALA A 44 LEU A 55 1 12 HELIX 4 AA4 THR A 61 VAL A 79 1 19 HELIX 5 AA5 LYS A 100 ASP A 112 1 13 HELIX 6 AA6 ALA A 124 LYS A 136 1 13 HELIX 7 AA7 LYS A 171 THR A 175 5 5 HELIX 8 AA8 THR A 231 LEU A 239 1 9 HELIX 9 AA9 ASP A 240 ILE A 251 1 12 HELIX 10 AB1 LYS A 274 MET A 279 1 6 HELIX 11 AB2 ASN A 282 THR A 286 5 5 SHEET 1 AA1 7 VAL A 25 ILE A 27 0 SHEET 2 AA1 7 ILE B 397 ILE B 403 -1 O ILE B 400 N ILE A 27 SHEET 3 AA1 7 PHE B 385 GLU B 391 -1 N PHE B 385 O ILE B 403 SHEET 4 AA1 7 PHE A 219 PRO A 226 -1 N MET A 224 O VAL B 386 SHEET 5 AA1 7 CYS A 207 ASP A 213 -1 N GLN A 208 O LEU A 225 SHEET 6 AA1 7 THR A 187 THR A 203 -1 N THR A 202 O TYR A 209 SHEET 7 AA1 7 LYS A 176 ARG A 181 -1 N LYS A 176 O MET A 192 SHEET 1 AA2 8 VAL A 25 ILE A 27 0 SHEET 2 AA2 8 ILE B 397 ILE B 403 -1 O ILE B 400 N ILE A 27 SHEET 3 AA2 8 PHE B 385 GLU B 391 -1 N PHE B 385 O ILE B 403 SHEET 4 AA2 8 PHE A 219 PRO A 226 -1 N MET A 224 O VAL B 386 SHEET 5 AA2 8 CYS A 207 ASP A 213 -1 N GLN A 208 O LEU A 225 SHEET 6 AA2 8 THR A 187 THR A 203 -1 N THR A 202 O TYR A 209 SHEET 7 AA2 8 ARG A 252 PRO A 261 -1 O VAL A 256 N SER A 197 SHEET 8 AA2 8 ILE B 377 HIS B 380 1 O ILE B 377 N SER A 257 SHEET 1 AA3 6 GLU A 114 VAL A 118 0 SHEET 2 AA3 6 THR A 84 LYS A 94 1 N TYR A 93 O VAL A 118 SHEET 3 AA3 6 MET A 154 ILE A 165 -1 O ILE A 157 N SER A 90 SHEET 4 AA3 6 GLY A 316 LYS A 328 -1 O VAL A 325 N LEU A 156 SHEET 5 AA3 6 PHE A 300 VAL A 312 -1 N ARG A 303 O GLU A 326 SHEET 6 AA3 6 PHE A 263 GLY A 270 -1 N PHE A 263 O VAL A 312 SSBOND 1 CYS A 206 CYS A 207 1555 1555 2.07 LINK ND1 HIS A 70 ZN ZN A 501 1555 1555 1.91 LINK ND1 HIS A 110 ZN ZN A 501 1555 1555 2.33 LINK ZN ZN A 501 O HOH A 904 1555 1555 2.59 LINK ZN ZN A 502 O HOH A 615 1555 1555 1.77 LINK ZN ZN A 502 O HOH A 897 1555 1555 1.96 LINK ZN ZN A 502 O HOH A 922 1555 1555 2.23 LINK K K A 503 O HOH A 739 1555 1555 3.33 LINK K K A 503 O HOH A 959 1555 1555 2.87 SITE 1 AC1 3 HIS A 70 HIS A 110 HOH A 904 SITE 1 AC2 3 HOH A 615 HOH A 897 HOH A 922 SITE 1 AC3 2 CL A 512 HOH A 959 SITE 1 AC4 2 LYS A 52 GLN A 95 SITE 1 AC5 2 ILE A 148 THR A 187 SITE 1 AC6 3 SER A 33 MET A 34 SER A 69 SITE 1 AC7 5 ASP A 146 TYR A 147 ARG A 303 HOH A 678 SITE 2 AC7 5 HOH A 881 SITE 1 AC8 3 GLY A -5 GLY A -2 LYS A 196 SITE 1 AC9 1 ASN A 241 SITE 1 AD1 3 ARG A 56 HOH A 773 HOH A 921 SITE 1 AD2 2 GLY A 270 K A 503 SITE 1 AD3 2 ASN A 130 HOH A1013 SITE 1 AD4 9 LEU A -3 GLY A -2 TYR A 68 SER A 71 SITE 2 AD4 9 LEU A 72 LYS A 171 SER A 173 ASP A 174 SITE 3 AD4 9 HOH A 786 SITE 1 AD5 7 GLN A 135 LYS A 136 THR A 137 ASN A 138 SITE 2 AD5 7 TYR A 161 HOH A 759 HOH A 833 SITE 1 AD6 11 MET A 62 GLU A 63 ASN A 66 ALA A 106 SITE 2 AD6 11 HIS A 110 SER A 121 PRO A 123 ASP A 184 SITE 3 AD6 11 THR A 186 HOH A 611 HOH A 661 CRYST1 62.600 74.280 84.380 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015974 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011851 0.00000