HEADER OXIDOREDUCTASE 08-MAR-17 5NDC TITLE STRUCTURE OF BA3-TYPE CYTOCHROME C OXIDASE FROM THERMUS THERMOPHILUS TITLE 2 BY SERIAL FEMTOSECOND CRYSTALLOGRAPHY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME C BA(3) SUBUNIT I,CYTOCHROME C OXIDASE COMPND 5 POLYPEPTIDE I,CYTOCHROME CBA3 SUBUNIT 1; COMPND 6 EC: 1.9.3.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: CYTOCHROME C BA(3) SUBUNIT II,CYTOCHROME C OXIDASE COMPND 12 POLYPEPTIDE II,CYTOCHROME CBA3 SUBUNIT 2; COMPND 13 EC: 1.9.3.1; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: CYTOCHROME C OXIDASE POLYPEPTIDE IIA; COMPND 17 CHAIN: C; COMPND 18 SYNONYM: CYTCHROME C OXIDASE SUBUNIT 3; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: CBAA, TTHA1135; SOURCE 5 EXPRESSION_SYSTEM: THERMUS THERMOPHILUS HB8; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 300852; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 9 ORGANISM_TAXID: 274; SOURCE 10 GENE: CBAB, CTAC, TTHA1134; SOURCE 11 EXPRESSION_SYSTEM: THERMUS THERMOPHILUS HB8; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 300852; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 15 ORGANISM_TAXID: 274; SOURCE 16 GENE: HGMM_F04D06C07, TTMY_0198; SOURCE 17 EXPRESSION_SYSTEM: THERMUS THERMOPHILUS HB8; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 300852 KEYWDS CYTOCHROME C OXIDASE, OXIDOREDUCTASE, SFX, RESPIRATORY CHAIN ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR R.ANDERSSON,C.SAFARI,R.DODS,E.NANGO,R.TANAKA,T.NAKANE,K.TONO,Y.JOTI, AUTHOR 2 P.BATH,E.DUNEVALL,E.BOSMAN,O.NUREKI,S.IWATA,R.NEUTZE,G.BRANDEN REVDAT 4 17-JAN-24 5NDC 1 LINK REVDAT 3 14-NOV-18 5NDC 1 REMARK REVDAT 2 24-JAN-18 5NDC 1 REMARK REVDAT 1 23-AUG-17 5NDC 0 JRNL AUTH R.ANDERSSON,C.SAFARI,R.DODS,E.NANGO,R.TANAKA,A.YAMASHITA, JRNL AUTH 2 T.NAKANE,K.TONO,Y.JOTI,P.BATH,E.DUNEVALL,R.BOSMAN,O.NUREKI, JRNL AUTH 3 S.IWATA,R.NEUTZE,G.BRANDEN JRNL TITL SERIAL FEMTOSECOND CRYSTALLOGRAPHY STRUCTURE OF CYTOCHROME C JRNL TITL 2 OXIDASE AT ROOM TEMPERATURE. JRNL REF SCI REP V. 7 4518 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28674417 JRNL DOI 10.1038/S41598-017-04817-Z REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 47055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2511 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3439 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5910 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 384 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.49000 REMARK 3 B22 (A**2) : -1.19000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.152 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.121 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6506 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6318 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8838 ; 1.612 ; 2.007 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14527 ; 0.988 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 749 ; 5.876 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 228 ;33.719 ;22.237 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 890 ;14.321 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;20.854 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 971 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6942 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1440 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3005 ; 1.596 ; 4.132 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3004 ; 1.595 ; 4.132 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3751 ; 2.515 ; 6.191 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3752 ; 2.515 ; 6.191 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3499 ; 1.932 ; 4.639 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3500 ; 1.932 ; 4.640 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5088 ; 3.138 ; 6.751 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7060 ; 4.533 ;47.922 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7061 ; 4.533 ;47.930 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 562 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9470 3.1160 28.9160 REMARK 3 T TENSOR REMARK 3 T11: 0.0558 T22: 0.0054 REMARK 3 T33: 0.0853 T12: 0.0092 REMARK 3 T13: 0.0516 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.9071 L22: 0.2771 REMARK 3 L33: 0.2077 L12: -0.0108 REMARK 3 L13: 0.0088 L23: 0.0081 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.0375 S13: 0.0841 REMARK 3 S21: 0.0023 S22: -0.0188 S23: -0.0778 REMARK 3 S31: 0.0179 S32: 0.0182 S33: -0.0343 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 168 REMARK 3 ORIGIN FOR THE GROUP (A): -16.2240 -0.7450 19.7360 REMARK 3 T TENSOR REMARK 3 T11: 0.0742 T22: 0.0512 REMARK 3 T33: 0.0383 T12: 0.0026 REMARK 3 T13: 0.0432 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.1935 L22: 0.1196 REMARK 3 L33: 0.3452 L12: -0.2552 REMARK 3 L13: -0.1594 L23: 0.1428 REMARK 3 S TENSOR REMARK 3 S11: 0.0630 S12: 0.1988 S13: 0.0607 REMARK 3 S21: -0.0022 S22: -0.0458 S23: 0.0061 REMARK 3 S31: -0.0083 S32: -0.0763 S33: -0.0172 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 4 C 34 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5720 -14.0520 12.5550 REMARK 3 T TENSOR REMARK 3 T11: 0.1106 T22: 0.0683 REMARK 3 T33: 0.0521 T12: 0.0191 REMARK 3 T13: 0.0093 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 8.6550 L22: 0.3203 REMARK 3 L33: 0.3417 L12: -1.5001 REMARK 3 L13: -1.1599 L23: 0.2103 REMARK 3 S TENSOR REMARK 3 S11: 0.0955 S12: 0.2600 S13: -0.1938 REMARK 3 S21: -0.0460 S22: -0.0860 S23: 0.0355 REMARK 3 S31: 0.0938 S32: -0.0284 S33: -0.0096 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5NDC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003680. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : BL3 REMARK 200 X-RAY GENERATOR MODEL : SACLA BEAMLINE BL3 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.6314 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MPCCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL 0.6.1 REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL 0.6.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50602 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 36.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 14.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3S8F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CACODYLATE TRIHYDRATE PH REMARK 280 5.3, 37% PEG400, 1.4M NACL ROOM TEMPERATURE FOR 2-3 DAYS, REMARK 280 LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.92500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.16000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.92500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 50.16000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -153.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 GLU A 7 REMARK 465 ILE A 8 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 GLU C 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 10 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 ARG A 330 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 9 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS A 233 CE2 TYR A 237 1.61 REMARK 500 OE2 GLU A 516 NE2 HIS B 8 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 706 O HOH A 706 2656 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 50 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 95 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 266 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP A 517 CB - CG - OD1 ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP A 517 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 102 103.63 -59.91 REMARK 500 ALA A 129 52.33 -150.04 REMARK 500 LEU A 132 166.69 70.85 REMARK 500 PHE A 135 53.65 35.31 REMARK 500 PHE A 207 -59.09 -127.05 REMARK 500 PRO A 278 42.91 -82.15 REMARK 500 SER A 368 42.74 -87.00 REMARK 500 PHE A 369 -96.28 49.52 REMARK 500 SER A 391 -76.40 -105.35 REMARK 500 HIS A 462 -19.96 -49.11 REMARK 500 ASP B 111 -89.37 -134.71 REMARK 500 ASN B 124 83.12 -161.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 604 REMARK 610 OLC A 605 REMARK 610 OLC A 606 REMARK 610 OLC A 607 REMARK 610 OLC A 608 REMARK 610 OLC A 609 REMARK 610 OLC A 610 REMARK 610 OLC A 611 REMARK 610 OLC A 612 REMARK 610 OLC A 613 REMARK 610 OLC A 614 REMARK 610 OLC C 101 REMARK 610 OLC C 102 REMARK 610 OLC C 103 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 72 NE2 REMARK 620 2 HEM A 602 NA 92.3 REMARK 620 3 HEM A 602 NB 94.4 90.6 REMARK 620 4 HEM A 602 NC 86.4 178.2 88.3 REMARK 620 5 HEM A 602 ND 85.5 89.9 179.6 91.3 REMARK 620 6 HIS A 386 NE2 175.1 86.4 90.3 95.0 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 233 ND1 REMARK 620 2 HIS A 282 NE2 96.1 REMARK 620 3 HIS A 283 NE2 150.7 92.1 REMARK 620 4 HOH A 752 O 91.3 135.4 102.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HAS A 603 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 384 NE2 REMARK 620 2 HAS A 603 NA 89.2 REMARK 620 3 HAS A 603 NB 92.7 178.1 REMARK 620 4 HAS A 603 NC 93.3 89.6 89.9 REMARK 620 5 HAS A 603 ND 88.9 89.9 90.5 177.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CUA B 201 CU2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 114 ND1 REMARK 620 2 CUA B 201 CU1 140.0 REMARK 620 3 CYS B 149 SG 128.1 55.6 REMARK 620 4 CYS B 153 SG 101.7 54.3 109.5 REMARK 620 5 MET B 160 SD 91.9 124.9 113.2 110.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CUA B 201 CU1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 149 SG REMARK 620 2 CUA B 201 CU2 55.2 REMARK 620 3 GLN B 151 O 87.3 107.6 REMARK 620 4 CYS B 153 SG 110.4 55.5 106.8 REMARK 620 5 HIS B 157 ND1 123.4 159.4 92.5 123.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HAS A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CUA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC C 103 DBREF 5NDC A 2 562 UNP Q5SJ79 COX1_THET8 2 562 DBREF 5NDC B 1 168 UNP Q5SJ80 COX2_THET8 1 168 DBREF1 5NDC C 1 34 UNP A0A1J1EEV7_THETH DBREF2 5NDC C A0A1J1EEV7 26 59 SEQADV 5NDC MET A -6 UNP Q5SJ79 INITIATING METHIONINE SEQADV 5NDC HIS A -5 UNP Q5SJ79 EXPRESSION TAG SEQADV 5NDC HIS A -4 UNP Q5SJ79 EXPRESSION TAG SEQADV 5NDC HIS A -3 UNP Q5SJ79 EXPRESSION TAG SEQADV 5NDC HIS A -2 UNP Q5SJ79 EXPRESSION TAG SEQADV 5NDC HIS A -1 UNP Q5SJ79 EXPRESSION TAG SEQADV 5NDC HIS A 0 UNP Q5SJ79 EXPRESSION TAG SEQADV 5NDC HIS A 1 UNP Q5SJ79 EXPRESSION TAG SEQRES 1 A 569 MET HIS HIS HIS HIS HIS HIS HIS ALA VAL ARG ALA SER SEQRES 2 A 569 GLU ILE SER ARG VAL TYR GLU ALA TYR PRO GLU LYS LYS SEQRES 3 A 569 ALA THR LEU TYR PHE LEU VAL LEU GLY PHE LEU ALA LEU SEQRES 4 A 569 ILE VAL GLY SER LEU PHE GLY PRO PHE GLN ALA LEU ASN SEQRES 5 A 569 TYR GLY ASN VAL ASP ALA TYR PRO LEU LEU LYS ARG LEU SEQRES 6 A 569 LEU PRO PHE VAL GLN SER TYR TYR GLN GLY LEU THR LEU SEQRES 7 A 569 HIS GLY VAL LEU ASN ALA ILE VAL PHE THR GLN LEU PHE SEQRES 8 A 569 ALA GLN ALA ILE MET VAL TYR LEU PRO ALA ARG GLU LEU SEQRES 9 A 569 ASN MET ARG PRO ASN MET GLY LEU MET TRP LEU SER TRP SEQRES 10 A 569 TRP MET ALA PHE ILE GLY LEU VAL VAL ALA ALA LEU PRO SEQRES 11 A 569 LEU LEU ALA ASN GLU ALA THR VAL LEU TYR THR PHE TYR SEQRES 12 A 569 PRO PRO LEU LYS GLY HIS TRP ALA PHE TYR LEU GLY ALA SEQRES 13 A 569 SER VAL PHE VAL LEU SER THR TRP VAL SER ILE TYR ILE SEQRES 14 A 569 VAL LEU ASP LEU TRP ARG ARG TRP LYS ALA ALA ASN PRO SEQRES 15 A 569 GLY LYS VAL THR PRO LEU VAL THR TYR MET ALA VAL VAL SEQRES 16 A 569 PHE TRP LEU MET TRP PHE LEU ALA SER LEU GLY LEU VAL SEQRES 17 A 569 LEU GLU ALA VAL LEU PHE LEU LEU PRO TRP SER PHE GLY SEQRES 18 A 569 LEU VAL GLU GLY VAL ASP PRO LEU VAL ALA ARG THR LEU SEQRES 19 A 569 PHE TRP TRP THR GLY HIS PRO ILE VAL TYR PHE TRP LEU SEQRES 20 A 569 LEU PRO ALA TYR ALA ILE ILE TYR THR ILE LEU PRO LYS SEQRES 21 A 569 GLN ALA GLY GLY LYS LEU VAL SER ASP PRO MET ALA ARG SEQRES 22 A 569 LEU ALA PHE LEU LEU PHE LEU LEU LEU SER THR PRO VAL SEQRES 23 A 569 GLY PHE HIS HIS GLN PHE ALA ASP PRO GLY ILE ASP PRO SEQRES 24 A 569 THR TRP LYS MET ILE HIS SER VAL LEU THR LEU PHE VAL SEQRES 25 A 569 ALA VAL PRO SER LEU MET THR ALA PHE THR VAL ALA ALA SEQRES 26 A 569 SER LEU GLU PHE ALA GLY ARG LEU ARG GLY GLY ARG GLY SEQRES 27 A 569 LEU PHE GLY TRP ILE ARG ALA LEU PRO TRP ASP ASN PRO SEQRES 28 A 569 ALA PHE VAL ALA PRO VAL LEU GLY LEU LEU GLY PHE ILE SEQRES 29 A 569 PRO GLY GLY ALA GLY GLY ILE VAL ASN ALA SER PHE THR SEQRES 30 A 569 LEU ASP TYR VAL VAL HIS ASN THR ALA TRP VAL PRO GLY SEQRES 31 A 569 HIS PHE HIS LEU GLN VAL ALA SER LEU VAL THR LEU THR SEQRES 32 A 569 ALA MET GLY SER LEU TYR TRP LEU LEU PRO ASN LEU THR SEQRES 33 A 569 GLY LYS PRO ILE SER ASP ALA GLN ARG ARG LEU GLY LEU SEQRES 34 A 569 ALA VAL VAL TRP LEU TRP PHE LEU GLY MET MET ILE MET SEQRES 35 A 569 ALA VAL GLY LEU HIS TRP ALA GLY LEU LEU ASN VAL PRO SEQRES 36 A 569 ARG ARG ALA TYR ILE ALA GLN VAL PRO ASP ALA TYR PRO SEQRES 37 A 569 HIS ALA ALA VAL PRO MET VAL PHE ASN VAL LEU ALA GLY SEQRES 38 A 569 ILE VAL LEU LEU VAL ALA LEU LEU LEU PHE ILE TYR GLY SEQRES 39 A 569 LEU PHE SER VAL LEU LEU SER ARG GLU ARG LYS PRO GLU SEQRES 40 A 569 LEU ALA GLU ALA PRO LEU PRO PHE ALA GLU VAL ILE SER SEQRES 41 A 569 GLY PRO GLU ASP ARG ARG LEU VAL LEU ALA MET ASP ARG SEQRES 42 A 569 ILE GLY PHE TRP PHE ALA VAL ALA ALA ILE LEU VAL VAL SEQRES 43 A 569 LEU ALA TYR GLY PRO THR LEU VAL GLN LEU PHE GLY HIS SEQRES 44 A 569 LEU ASN PRO VAL PRO GLY TRP ARG LEU TRP SEQRES 1 B 168 MET VAL ASP GLU HIS LYS ALA HIS LYS ALA ILE LEU ALA SEQRES 2 B 168 TYR GLU LYS GLY TRP LEU ALA PHE SER LEU ALA MET LEU SEQRES 3 B 168 PHE VAL PHE ILE ALA LEU ILE ALA TYR THR LEU ALA THR SEQRES 4 B 168 HIS THR ALA GLY VAL ILE PRO ALA GLY LYS LEU GLU ARG SEQRES 5 B 168 VAL ASP PRO THR THR VAL ARG GLN GLU GLY PRO TRP ALA SEQRES 6 B 168 ASP PRO ALA GLN ALA VAL VAL GLN THR GLY PRO ASN GLN SEQRES 7 B 168 TYR THR VAL TYR VAL LEU ALA PHE ALA PHE GLY TYR GLN SEQRES 8 B 168 PRO ASN PRO ILE GLU VAL PRO GLN GLY ALA GLU ILE VAL SEQRES 9 B 168 PHE LYS ILE THR SER PRO ASP VAL ILE HIS GLY PHE HIS SEQRES 10 B 168 VAL GLU GLY THR ASN ILE ASN VAL GLU VAL LEU PRO GLY SEQRES 11 B 168 GLU VAL SER THR VAL ARG TYR THR PHE LYS ARG PRO GLY SEQRES 12 B 168 GLU TYR ARG ILE ILE CYS ASN GLN TYR CYS GLY LEU GLY SEQRES 13 B 168 HIS GLN ASN MET PHE GLY THR ILE VAL VAL LYS GLU SEQRES 1 C 34 MET GLU GLU LYS PRO LYS GLY ALA LEU ALA VAL ILE LEU SEQRES 2 C 34 VAL LEU THR LEU THR ILE LEU VAL PHE TRP LEU GLY VAL SEQRES 3 C 34 TYR ALA VAL PHE PHE ALA ARG GLY HET CU A 601 1 HET HEM A 602 43 HET HAS A 603 65 HET OLC A 604 23 HET OLC A 605 18 HET OLC A 606 17 HET OLC A 607 15 HET OLC A 608 18 HET OLC A 609 15 HET OLC A 610 20 HET OLC A 611 21 HET OLC A 612 20 HET OLC A 613 9 HET OLC A 614 9 HET CUA B 201 2 HET OLC B 202 25 HET OLC C 101 24 HET OLC C 102 15 HET OLC C 103 24 HETNAM CU COPPER (II) ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM HAS HEME-AS HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM CUA DINUCLEAR COPPER ION HETSYN HEM HEME HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 4 CU CU 2+ FORMUL 5 HEM C34 H32 FE N4 O4 FORMUL 6 HAS C54 H64 FE N4 O6 FORMUL 7 OLC 15(C21 H40 O4) FORMUL 18 CUA CU2 FORMUL 23 HOH *92(H2 O) HELIX 1 AA1 ARG A 10 TYR A 15 1 6 HELIX 2 AA2 PRO A 16 LEU A 37 1 22 HELIX 3 AA3 PHE A 38 TYR A 46 1 9 HELIX 4 AA4 ALA A 51 LEU A 59 1 9 HELIX 5 AA5 SER A 64 ILE A 78 1 15 HELIX 6 AA6 ILE A 78 ASN A 98 1 21 HELIX 7 AA7 ASN A 102 ALA A 126 1 25 HELIX 8 AA8 HIS A 142 ASN A 174 1 33 HELIX 9 AA9 PRO A 180 PHE A 207 1 28 HELIX 10 AB1 PHE A 207 PHE A 213 1 7 HELIX 11 AB2 ASP A 220 HIS A 233 1 14 HELIX 12 AB3 HIS A 233 ILE A 250 1 18 HELIX 13 AB4 ILE A 250 GLY A 256 1 7 HELIX 14 AB5 SER A 261 SER A 276 1 16 HELIX 15 AB6 VAL A 279 GLN A 284 5 6 HELIX 16 AB7 ASP A 291 ALA A 306 1 16 HELIX 17 AB8 ALA A 306 ARG A 327 1 22 HELIX 18 AB9 PHE A 333 ALA A 338 1 6 HELIX 19 AC1 ASN A 343 SER A 368 1 26 HELIX 20 AC2 LEU A 371 HIS A 376 1 6 HELIX 21 AC3 ALA A 379 VAL A 389 1 11 HELIX 22 AC4 SER A 391 SER A 400 1 10 HELIX 23 AC5 TRP A 403 GLY A 410 1 8 HELIX 24 AC6 SER A 414 LEU A 445 1 32 HELIX 25 AC7 TYR A 452 VAL A 456 5 5 HELIX 26 AC8 TYR A 460 HIS A 462 5 3 HELIX 27 AC9 ALA A 463 SER A 494 1 32 HELIX 28 AD1 LYS A 498 ALA A 504 1 7 HELIX 29 AD2 GLU A 516 ASP A 525 1 10 HELIX 30 AD3 ARG A 526 HIS A 552 1 27 HELIX 31 AD4 ASP B 3 ALA B 38 1 36 HELIX 32 AD5 THR B 39 ILE B 45 5 7 HELIX 33 AD6 ASP B 66 GLN B 69 5 4 HELIX 34 AD7 GLY B 156 ASN B 159 5 4 HELIX 35 AD8 PRO C 5 ARG C 33 1 29 SHEET 1 AA1 2 GLY A 218 VAL A 219 0 SHEET 2 AA1 2 VAL A 556 PRO A 557 -1 O VAL A 556 N VAL A 219 SHEET 1 AA2 3 VAL B 71 GLY B 75 0 SHEET 2 AA2 3 GLN B 78 PHE B 86 -1 O THR B 80 N VAL B 72 SHEET 3 AA2 3 GLY B 89 GLN B 91 -1 O GLY B 89 N PHE B 86 SHEET 1 AA3 4 VAL B 71 GLY B 75 0 SHEET 2 AA3 4 GLN B 78 PHE B 86 -1 O THR B 80 N VAL B 72 SHEET 3 AA3 4 GLU B 102 THR B 108 1 O LYS B 106 N VAL B 81 SHEET 4 AA3 4 SER B 133 THR B 138 -1 O TYR B 137 N ILE B 103 SHEET 1 AA4 5 ILE B 95 PRO B 98 0 SHEET 2 AA4 5 PHE B 161 LYS B 167 1 O VAL B 165 N ILE B 95 SHEET 3 AA4 5 GLY B 143 ILE B 148 -1 N TYR B 145 O ILE B 164 SHEET 4 AA4 5 HIS B 114 VAL B 118 -1 N HIS B 117 O ILE B 148 SHEET 5 AA4 5 ASN B 124 VAL B 127 -1 O VAL B 127 N HIS B 114 LINK NE2 HIS A 72 FE HEM A 602 1555 1555 2.08 LINK ND1 HIS A 233 CU CU A 601 1555 1555 1.97 LINK NE2 HIS A 282 CU CU A 601 1555 1555 1.98 LINK NE2 HIS A 283 CU CU A 601 1555 1555 1.96 LINK NE2 HIS A 384 FE HAS A 603 1555 1555 2.15 LINK NE2 HIS A 386 FE HEM A 602 1555 1555 2.06 LINK CU CU A 601 O HOH A 752 1555 1555 2.28 LINK ND1 HIS B 114 CU2 CUA B 201 1555 1555 2.11 LINK SG CYS B 149 CU1 CUA B 201 1555 1555 2.32 LINK SG CYS B 149 CU2 CUA B 201 1555 1555 2.31 LINK O GLN B 151 CU1 CUA B 201 1555 1555 2.53 LINK SG CYS B 153 CU1 CUA B 201 1555 1555 2.27 LINK SG CYS B 153 CU2 CUA B 201 1555 1555 2.30 LINK ND1 HIS B 157 CU1 CUA B 201 1555 1555 1.93 LINK SD MET B 160 CU2 CUA B 201 1555 1555 2.39 CISPEP 1 PRO A 137 PRO A 138 0 8.39 CISPEP 2 ALA B 87 PHE B 88 0 3.05 CISPEP 3 GLN B 91 PRO B 92 0 -4.43 CISPEP 4 ASN B 93 PRO B 94 0 0.90 SITE 1 AC1 4 HIS A 233 HIS A 282 HIS A 283 HOH A 752 SITE 1 AC2 20 GLY A 39 GLN A 42 ALA A 43 TYR A 46 SITE 2 AC2 20 TYR A 65 HIS A 72 ASN A 76 LEU A 132 SITE 3 AC2 20 TYR A 133 PHE A 385 HIS A 386 VAL A 389 SITE 4 AC2 20 ALA A 390 THR A 394 MET A 432 ARG A 449 SITE 5 AC2 20 ARG A 450 ALA A 451 HOH A 711 HOH A 712 SITE 1 AC3 24 TYR A 133 TRP A 229 VAL A 236 TYR A 237 SITE 2 AC3 24 HIS A 282 THR A 302 LEU A 310 ALA A 313 SITE 3 AC3 24 LEU A 353 GLY A 360 GLY A 363 ASN A 366 SITE 4 AC3 24 ALA A 367 ASP A 372 HIS A 376 HIS A 384 SITE 5 AC3 24 PHE A 385 GLN A 388 ARG A 449 HOH A 707 SITE 6 AC3 24 HOH A 709 HOH A 738 HOH A 743 HOH A 752 SITE 1 AC4 5 PHE A 213 LEU A 215 TRP A 341 TRP A 426 SITE 2 AC4 5 OLC A 605 SITE 1 AC5 3 TRP A 143 SER A 212 OLC A 604 SITE 1 AC6 2 TRP A 111 OLC A 608 SITE 1 AC7 3 TRP A 167 ARG A 168 PHE A 531 SITE 1 AC8 3 TRP A 111 OLC A 606 OLC A 609 SITE 1 AC9 3 ASN A 102 LEU A 472 OLC A 608 SITE 1 AD1 2 ARG A 419 LEU A 420 SITE 1 AD2 1 TRP A 341 SITE 1 AD3 1 LEU B 37 SITE 1 AD4 6 HIS B 114 CYS B 149 GLN B 151 CYS B 153 SITE 2 AD4 6 HIS B 157 MET B 160 SITE 1 AD5 5 PHE B 21 VAL B 28 LEU B 32 TYR B 35 SITE 2 AD5 5 PHE C 31 SITE 1 AD6 2 ALA C 32 OLC C 102 SITE 1 AD7 4 TRP A 441 LEU A 444 ARG C 33 OLC C 101 SITE 1 AD8 4 TYR B 14 PHE B 21 TYR B 35 ILE C 12 CRYST1 145.850 100.320 96.620 90.00 126.76 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006856 0.000000 0.005122 0.00000 SCALE2 0.000000 0.009968 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012919 0.00000