HEADER VIRUS 11-MAR-17 5NET TITLE LOCALISED RECONSTRUCTION OF INTEGRIN ALPHA V BETA 6 BOUND TO FOOT AND TITLE 2 MOUTH DISEASE VIRUS O1 MANISA - POSE A. CAVEAT 5NET ILE A 147 HAS WRONG CHIRALITY AT ATOM CA MAN D 3 HAS WRONG CAVEAT 2 5NET CHIRALITY AT ATOM C1 MAN F 4 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 5NET NAG B 501 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: O1 MANISA VP1; COMPND 3 CHAIN: 1; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: O1 MANISA VP2; COMPND 7 CHAIN: 2; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: O1 MANISA VP3; COMPND 11 CHAIN: 3; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: O1 MANISA VP4; COMPND 15 CHAIN: 4; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: INTEGRIN ALPHA-V; COMPND 19 CHAIN: A; COMPND 20 SYNONYM: VITRONECTIN RECEPTOR SUBUNIT ALPHA; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 6; COMPND 23 MOLECULE: INTEGRIN BETA-6; COMPND 24 CHAIN: B; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FOOT-AND-MOUTH DISEASE VIRUS; SOURCE 3 ORGANISM_TAXID: 12110; SOURCE 4 EXPRESSION_SYSTEM: CRICETINAE GEN. SP.; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 36483; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: FOOT-AND-MOUTH DISEASE VIRUS; SOURCE 8 ORGANISM_TAXID: 12110; SOURCE 9 EXPRESSION_SYSTEM: CRICETINAE GEN. SP.; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 36483; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: FOOT-AND-MOUTH DISEASE VIRUS; SOURCE 13 ORGANISM_TAXID: 12110; SOURCE 14 EXPRESSION_SYSTEM: CRICETINAE GEN. SP.; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 36483; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: FOOT-AND-MOUTH DISEASE VIRUS; SOURCE 18 ORGANISM_TAXID: 12110; SOURCE 19 EXPRESSION_SYSTEM: CRICETINAE GEN. SP.; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 36483; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: ITGAV, MSK8, VNRA; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 29 EXPRESSION_SYSTEM_CELL_LINE: HEK293S; SOURCE 30 MOL_ID: 6; SOURCE 31 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 32 ORGANISM_COMMON: HUMAN; SOURCE 33 ORGANISM_TAXID: 9606; SOURCE 34 GENE: ITGB6; SOURCE 35 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 36 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 37 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 38 EXPRESSION_SYSTEM_CELL_LINE: HEK293S KEYWDS FOOT AND MOUTH DISEASE VIRUS, FMDV, VIRUS, OPANASIA, VIRUS-RECEPTOR, KEYWDS 2 COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR A.KOTECHA,D.STUART REVDAT 5 29-JUL-20 5NET 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 28-MAR-18 5NET 1 TITLE REVDAT 3 04-OCT-17 5NET 1 TITLE REVDAT 2 30-AUG-17 5NET 1 REMARK REVDAT 1 21-JUN-17 5NET 0 JRNL AUTH A.KOTECHA,Q.WANG,X.DONG,S.L.ILCA,M.ONDIVIELA,R.ZIHE,J.SEAGO, JRNL AUTH 2 B.CHARLESTON,E.E.FRY,N.G.A.ABRESCIA,T.A.SPRINGER, JRNL AUTH 3 J.T.HUISKONEN,D.I.STUART JRNL TITL RULES OF ENGAGEMENT BETWEEN ALPHA V BETA 6 INTEGRIN AND JRNL TITL 2 FOOT-AND-MOUTH DISEASE VIRUS. JRNL REF NAT COMMUN V. 8 15408 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28534487 JRNL DOI 10.1038/NCOMMS15408 REMARK 2 REMARK 2 RESOLUTION. 8.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, CTFFIND, UCSF CHIMERA, REMARK 3 PHENIX, RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : 120.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 8.600 REMARK 3 NUMBER OF PARTICLES : 13483 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 5NET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003987. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : FOOT AND MOUTH VIRUS AND REMARK 245 INTEGRIN; FOOT-AND-MOUTH REMARK 245 DISEASE VIRUS; INTEGRIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 360 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI POLARA 300 REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 4000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 18.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 160000 REMARK 245 CALIBRATED MAGNIFICATION : 37037 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 75960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, A, B, C, D, E, F, REMARK 350 AND CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP 2 1 REMARK 465 LYS 2 2 REMARK 465 LYS 2 3 REMARK 465 THR 2 4 REMARK 465 GLU 2 5 REMARK 465 GLU 2 6 REMARK 465 THR 2 7 REMARK 465 THR 2 8 REMARK 465 LEU 2 9 REMARK 465 LEU 2 10 REMARK 465 GLU 2 11 REMARK 465 GLY 4 1 REMARK 465 ALA 4 2 REMARK 465 GLY 4 3 REMARK 465 GLN 4 4 REMARK 465 SER 4 5 REMARK 465 SER 4 6 REMARK 465 PRO 4 7 REMARK 465 ALA 4 8 REMARK 465 THR 4 9 REMARK 465 GLY 4 10 REMARK 465 SER 4 11 REMARK 465 GLN 4 12 REMARK 465 ASN 4 13 REMARK 465 GLN 4 14 REMARK 465 ASP 4 40 REMARK 465 ASN 4 41 REMARK 465 ALA 4 42 REMARK 465 THR 4 43 REMARK 465 SER 4 44 REMARK 465 GLY 4 45 REMARK 465 GLY 4 46 REMARK 465 SER 4 47 REMARK 465 ASN 4 48 REMARK 465 GLU 4 49 REMARK 465 GLY 4 50 REMARK 465 SER 4 51 REMARK 465 THR 4 52 REMARK 465 ASP 4 53 REMARK 465 THR 4 54 REMARK 465 THR 4 55 REMARK 465 SER 4 56 REMARK 465 THR 4 57 REMARK 465 HIS 4 58 REMARK 465 THR 4 59 REMARK 465 THR 4 60 REMARK 465 ASN 4 61 REMARK 465 THR 4 62 REMARK 465 GLN 4 63 REMARK 465 ASN 4 64 REMARK 465 ASN 4 65 REMARK 465 ALA A 30 REMARK 465 SER A 31 REMARK 465 LEU A 264 REMARK 465 GLN A 504 REMARK 465 LYS A 505 REMARK 465 ALA B 11 REMARK 465 GLU B 12 REMARK 465 GLN B 28A REMARK 465 GLU B 28B REMARK 465 ASN B 28C REMARK 465 PHE B 28D REMARK 465 THR B 28E REMARK 465 HIS B 28F REMARK 465 PRO B 28G REMARK 465 SER B 28H REMARK 465 GLY B 28I REMARK 465 VAL B 28J REMARK 465 GLY B 28K REMARK 465 GLU B 28L REMARK 465 ALA B 43 REMARK 465 ASN B 44 REMARK 465 LEU B 45 REMARK 465 LEU B 46 REMARK 465 ALA B 47 REMARK 465 LYS B 48 REMARK 465 GLY B 49 REMARK 465 GLU B 439 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ARG 1 200 NZ LYS 3 84 0.48 REMARK 500 O ARG 1 26 CD GLU 3 210 0.50 REMARK 500 C GLN 1 203 CG2 VAL 3 174 0.55 REMARK 500 NZ LYS 1 202 N VAL 3 174 0.56 REMARK 500 C ARG 1 26 OE2 GLU 3 210 0.68 REMARK 500 C ALA 1 199 CE LYS 3 84 0.68 REMARK 500 CE LYS 1 202 C ASP 3 173 0.71 REMARK 500 CD LYS 1 202 O ASP 3 173 0.79 REMARK 500 CZ ARG 1 200 N ALA 3 83 0.79 REMARK 500 CZ ARG 1 200 C ALA 3 82 0.90 REMARK 500 CE LYS 1 202 O ASP 3 173 0.94 REMARK 500 C ALA 1 199 NZ LYS 3 84 0.94 REMARK 500 O ARG 1 26 OE2 GLU 3 210 0.95 REMARK 500 NH2 ARG B 74 O SER B 144 0.96 REMARK 500 NH1 ARG 1 200 N ALA 3 83 1.03 REMARK 500 NE ARG 1 200 C ALA 3 82 1.04 REMARK 500 NH2 ARG 1 200 N ALA 3 82 1.05 REMARK 500 O ALA 1 199 CE LYS 3 84 1.07 REMARK 500 O GLN 1 203 CG2 VAL 3 174 1.12 REMARK 500 CZ ARG B 74 O SER B 144 1.22 REMARK 500 NH2 ARG 1 200 CA ALA 3 82 1.23 REMARK 500 N LYS 1 204 CG2 VAL 3 174 1.29 REMARK 500 CE1 PHE 3 30 CE MET 4 34 1.31 REMARK 500 N ARG 1 27 OE2 GLU 3 210 1.34 REMARK 500 NZ LYS 1 202 CA VAL 3 174 1.34 REMARK 500 C ARG 1 26 CD GLU 3 210 1.34 REMARK 500 CA ASP B 110 CB SER B 148 1.40 REMARK 500 NE ARG 1 200 N ALA 3 83 1.40 REMARK 500 N ARG 1 26 OE1 GLU 3 210 1.43 REMARK 500 O THR 1 30 OD1 ASN 3 43 1.44 REMARK 500 NZ LYS 1 202 C ASP 3 173 1.50 REMARK 500 CD LYS 1 202 C ASP 3 173 1.57 REMARK 500 CE LYS 1 202 N VAL 3 174 1.57 REMARK 500 NH2 ARG B 74 C SER B 144 1.57 REMARK 500 NH2 ARG 1 200 C LEU 3 81 1.59 REMARK 500 O ARG 1 26 OE1 GLU 3 210 1.60 REMARK 500 NE ARG 1 200 O ALA 3 82 1.63 REMARK 500 O GLY 1 137 CD2 LEU 2 80 1.64 REMARK 500 CZ ARG 1 200 CA ALA 3 82 1.66 REMARK 500 O ARG 1 26 CG GLU 3 210 1.67 REMARK 500 OD1 ASN A 585 C1 NAG G 1 1.69 REMARK 500 NH1 ARG 1 200 CA ALA 3 83 1.69 REMARK 500 CA ALA 1 199 CE LYS 3 84 1.70 REMARK 500 OE1 GLU 1 184 NH1 ARG 3 34 1.75 REMARK 500 N ARG 1 200 CE LYS 3 84 1.75 REMARK 500 CA ARG 1 200 NZ LYS 3 84 1.76 REMARK 500 NH1 ARG 1 200 C ALA 3 82 1.78 REMARK 500 ND2 ASN A 585 C1 NAG G 1 1.79 REMARK 500 CD ARG 1 200 O ALA 3 82 1.83 REMARK 500 NH1 ARG 1 200 O ALA 3 83 1.83 REMARK 500 REMARK 500 THIS ENTRY HAS 110 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 147 CB - CA - C ANGL. DEV. = -23.9 DEGREES REMARK 500 ILE A 147 N - CA - C ANGL. DEV. = 50.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU 1 51 56.05 -93.23 REMARK 500 PRO 1 104 83.07 -69.09 REMARK 500 ASN 1 133 62.83 -151.87 REMARK 500 ASN 1 143 -62.53 -127.69 REMARK 500 THR 1 161 -8.43 -53.74 REMARK 500 CYS 1 187 77.71 54.66 REMARK 500 HIS 1 201 93.79 -69.49 REMARK 500 TYR 2 36 -12.70 70.24 REMARK 500 ALA 2 37 148.70 -175.32 REMARK 500 LEU 2 51 31.56 -95.16 REMARK 500 GLN 2 139 44.47 -107.73 REMARK 500 ASN 2 190 -166.33 -128.68 REMARK 500 ASN 2 207 65.43 36.39 REMARK 500 ASN 3 179 73.02 58.43 REMARK 500 LEU 3 213 76.28 59.74 REMARK 500 MET 4 27 -81.22 -64.01 REMARK 500 GLN 4 28 -24.37 -148.02 REMARK 500 LEU 4 79 -169.58 -127.06 REMARK 500 PRO A 28 -138.43 -87.81 REMARK 500 PRO A 48 109.12 -53.92 REMARK 500 SER A 63 -117.31 59.49 REMARK 500 ARG A 65 59.13 -103.08 REMARK 500 GLN A 102 -111.37 58.95 REMARK 500 MET A 118 -98.22 -120.25 REMARK 500 THR A 136 110.29 -160.92 REMARK 500 ALA A 149 -61.05 65.22 REMARK 500 ASN A 206 60.14 -108.65 REMARK 500 ASN A 260 15.44 -146.61 REMARK 500 ARG A 398 -54.67 -125.82 REMARK 500 SER A 399 -60.39 -145.54 REMARK 500 TYR A 515 41.60 -81.75 REMARK 500 SER A 516 -22.52 -166.49 REMARK 500 SER A 546 41.54 -95.82 REMARK 500 THR A 571 -81.82 53.55 REMARK 500 PRO A 576 170.90 -59.83 REMARK 500 PHE A 581 8.89 58.16 REMARK 500 LEU B 8 86.19 60.53 REMARK 500 ASP B 40 -157.63 -140.52 REMARK 500 SER B 124 -2.02 -165.25 REMARK 500 GLU B 134 54.05 -143.06 REMARK 500 VAL B 158 -76.00 -135.98 REMARK 500 CYS B 177 51.21 -106.18 REMARK 500 PRO B 181 86.99 -57.71 REMARK 500 ASP B 199 86.65 -65.20 REMARK 500 ASN B 215 -162.76 -165.79 REMARK 500 ILE B 216 -77.66 -96.16 REMARK 500 MET B 258 30.97 -90.37 REMARK 500 HIS B 274 42.19 -145.01 REMARK 500 ASP B 276 -171.83 -69.56 REMARK 500 GLN B 314 -18.12 -148.89 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR 1 136 GLY 1 137 -48.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG C 1 REMARK 610 NAG D 1 REMARK 610 MAN E 1 REMARK 610 NAG G 1 REMARK 610 MAN 3 301 REMARK 610 MAN 3 302 REMARK 610 MAN A 607 REMARK 610 NAG A 614 REMARK 610 NAG B 502 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 621 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 230 OD1 REMARK 620 2 ASN A 232 OD1 73.6 REMARK 620 3 ASP A 234 OD1 75.0 63.6 REMARK 620 4 ILE A 236 O 70.5 142.7 96.9 REMARK 620 5 ASP A 238 OD1 128.3 116.0 156.5 94.6 REMARK 620 6 ASP A 238 OD2 80.3 81.9 141.9 101.7 53.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 622 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 284 OD1 REMARK 620 2 ASN A 286 OD1 78.4 REMARK 620 3 ASP A 288 OD1 62.3 69.9 REMARK 620 4 TYR A 290 O 69.9 146.3 103.5 REMARK 620 5 ASP A 292 OD1 130.2 112.3 167.3 81.5 REMARK 620 6 ASP A 292 OD2 86.6 73.6 135.7 93.0 54.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 620 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 349 OD1 REMARK 620 2 ASP A 351 OD1 83.2 REMARK 620 3 ASP A 353 OD1 74.8 80.4 REMARK 620 4 PHE A 355 O 71.2 154.3 90.7 REMARK 620 5 ASP A 357 OD1 147.1 109.7 135.9 93.5 REMARK 620 6 ASP A 357 OD2 108.3 67.5 146.8 122.1 54.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 619 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 415 OD1 REMARK 620 2 ASP A 415 OD2 48.0 REMARK 620 3 ASN A 417 OD1 80.2 91.9 REMARK 620 4 TYR A 419 O 109.4 152.8 66.5 REMARK 620 5 ASP A 421 OD1 101.0 101.3 163.3 97.8 REMARK 620 N 1 2 3 4 REMARK 630 REMARK 630 MOLECULE TYPE: OLIGOSACCHARIDE METABOLISM REMARK 630 MOLECULE NAME: ALPHA-D-MANNOPYRANOSE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 MAN 3 301 REMARK 630 MAN 3 302 REMARK 630 MAN A 607 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: NULL REMARK 630 DETAILS: OLIGOSACCHARIDE REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-3631 RELATED DB: EMDB REMARK 900 ICOSAHEDRAL RECONSTRUCTION OF FMDV O1 MANISA AND INTEGRIN ALPHA V REMARK 900 BETA 6 COMPLEX REMARK 900 RELATED ID: EMD-3634 RELATED DB: EMDB REMARK 900 LOCALISED RECONSTRUCTION OF ALPHA V BETA 6 BOUND TO FOOT AND MOUTH REMARK 900 DISEASE VIRUS O PANASIA - POSE A DBREF 5NET 1 1 208 UNP Q6PMW3 Q6PMW3_9PICO 725 932 DBREF 5NET 2 1 218 UNP Q6PMW3 Q6PMW3_9PICO 287 504 DBREF 5NET 3 1 220 UNP Q80B23 Q80B23_9PICO 505 724 DBREF 5NET 4 1 85 UNP E1ACS1 E1ACS1_9PICO 202 286 DBREF 5NET A 1 594 UNP P06756 ITAV_HUMAN 31 624 DBREF 5NET B 5 471 UNP P18564 ITB6_HUMAN 22 491 SEQADV 5NET TYR 2 93 UNP Q6PMW3 SER 379 CONFLICT SEQADV 5NET ARG 3 56 UNP Q80B23 HIS 560 CONFLICT SEQADV 5NET THR 3 168 UNP Q80B23 ALA 672 CONFLICT SEQADV 5NET CYS A 400 UNP P06756 MET 430 CONFLICT SEQADV 5NET CYS B 267 UNP P18564 ILE 287 CONFLICT SEQADV 5NET ASN B 449 UNP P18564 HIS 469 CONFLICT SEQRES 1 1 208 THR THR SER ALA GLY GLU SER ALA ASP PRO VAL THR ALA SEQRES 2 1 208 THR VAL GLU ASN TYR GLY GLY GLU THR GLN VAL GLN ARG SEQRES 3 1 208 ARG GLN HIS THR ASP VAL SER PHE ILE LEU ASP ARG PHE SEQRES 4 1 208 VAL LYS VAL THR PRO LYS ASP GLN ILE ASN VAL LEU ASP SEQRES 5 1 208 LEU MET GLN THR PRO ALA HIS THR LEU VAL GLY ALA LEU SEQRES 6 1 208 LEU ARG THR ALA THR TYR TYR PHE ALA ASP LEU GLU VAL SEQRES 7 1 208 ALA VAL LYS HIS GLU GLY ASN LEU THR TRP VAL PRO ASN SEQRES 8 1 208 GLY ALA PRO GLU ALA ALA LEU ASP ASN THR THR ASN PRO SEQRES 9 1 208 THR ALA TYR HIS LYS ALA PRO LEU THR ARG LEU ALA LEU SEQRES 10 1 208 PRO TYR THR ALA PRO HIS ARG VAL LEU ALA THR VAL TYR SEQRES 11 1 208 ASN GLY ASN SER LYS TYR GLY ASP GLY THR VAL ALA ASN SEQRES 12 1 208 VAL ARG GLY ASP LEU GLN VAL LEU ALA GLN LYS ALA ALA SEQRES 13 1 208 ARG ALA LEU PRO THR SER PHE ASN TYR GLY ALA ILE LYS SEQRES 14 1 208 ALA THR ARG VAL THR GLU LEU LEU TYR ARG MET LYS ARG SEQRES 15 1 208 ALA GLU THR TYR CYS PRO ARG PRO LEU LEU ALA ILE HIS SEQRES 16 1 208 PRO ASP GLN ALA ARG HIS LYS GLN LYS ILE VAL ALA PRO SEQRES 1 2 218 ASP LYS LYS THR GLU GLU THR THR LEU LEU GLU ASP ARG SEQRES 2 2 218 ILE LEU THR THR ARG ASN GLY HIS THR THR SER THR THR SEQRES 3 2 218 GLN SER SER VAL GLY VAL THR TYR GLY TYR ALA THR ALA SEQRES 4 2 218 GLU ASP PHE VAL SER GLY PRO ASN THR SER GLY LEU GLU SEQRES 5 2 218 THR ARG VAL ALA GLN ALA GLU ARG PHE PHE LYS THR HIS SEQRES 6 2 218 LEU PHE ASP TRP VAL THR SER ASP PRO PHE GLY ARG CYS SEQRES 7 2 218 HIS LEU LEU GLU LEU PRO THR ASP HIS LYS GLY VAL TYR SEQRES 8 2 218 GLY TYR LEU THR ASP SER TYR ALA TYR MET ARG ASN GLY SEQRES 9 2 218 TRP ASP VAL GLU VAL THR ALA VAL GLY ASN GLN PHE ASN SEQRES 10 2 218 GLY GLY CYS LEU LEU VAL ALA MET VAL PRO GLU LEU CYS SEQRES 11 2 218 SER ILE GLN LYS ARG GLU LEU TYR GLN LEU THR LEU PHE SEQRES 12 2 218 PRO HIS GLN PHE ILE ASN PRO ARG THR ASN MET THR ALA SEQRES 13 2 218 HIS ILE THR VAL PRO PHE VAL GLY VAL ASN ARG TYR ASP SEQRES 14 2 218 GLN TYR LYS VAL HIS LYS PRO TRP THR LEU VAL VAL MET SEQRES 15 2 218 VAL VAL ALA PRO LEU THR VAL ASN SER GLU GLY ALA PRO SEQRES 16 2 218 GLN ILE LYS VAL TYR ALA ASN ILE ALA PRO THR ASN VAL SEQRES 17 2 218 HIS VAL ALA GLY GLU PHE PRO SER LYS GLU SEQRES 1 3 220 GLY ILE PHE PRO VAL ALA CYS SER ASP GLY TYR GLY GLY SEQRES 2 3 220 LEU VAL THR THR ASP PRO LYS THR ALA ASP PRO ALA TYR SEQRES 3 3 220 GLY LYS VAL PHE ASN PRO PRO ARG ASN MET LEU PRO GLY SEQRES 4 3 220 ARG PHE THR ASN PHE LEU ASP VAL ALA GLU ALA CYS PRO SEQRES 5 3 220 THR PHE LEU ARG PHE GLU GLY ASP VAL PRO TYR VAL THR SEQRES 6 3 220 THR LYS THR ASP SER ASP ARG VAL LEU ALA GLN PHE ASP SEQRES 7 3 220 LEU SER LEU ALA ALA LYS HIS MET SER ASN THR PHE LEU SEQRES 8 3 220 ALA GLY LEU ALA GLN TYR TYR THR GLN TYR SER GLY THR SEQRES 9 3 220 ILE ASN LEU HIS PHE MET PHE THR GLY PRO THR ASP ALA SEQRES 10 3 220 LYS ALA ARG TYR MET ILE ALA TYR ALA PRO PRO GLY MET SEQRES 11 3 220 GLU PRO PRO LYS THR PRO GLU ALA ALA ALA HIS CYS ILE SEQRES 12 3 220 HIS ALA GLU TRP ASP THR GLY LEU ASN SER LYS PHE THR SEQRES 13 3 220 PHE SER ILE PRO TYR LEU SER ALA ALA ASP TYR THR TYR SEQRES 14 3 220 THR ALA SER ASP VAL ALA GLU THR THR ASN VAL GLN GLY SEQRES 15 3 220 TRP VAL CYS LEU PHE GLN ILE THR HIS GLY LYS ALA ASP SEQRES 16 3 220 GLY ASP ALA LEU VAL VAL LEU ALA SER ALA GLY LYS ASP SEQRES 17 3 220 PHE GLU LEU ARG LEU PRO VAL ASP ALA ARG THR GLN SEQRES 1 4 85 GLY ALA GLY GLN SER SER PRO ALA THR GLY SER GLN ASN SEQRES 2 4 85 GLN SER GLY ASN THR GLY SER ILE ILE ASN ASN TYR TYR SEQRES 3 4 85 MET GLN GLN TYR GLN ASN SER MET ASP THR GLN LEU GLY SEQRES 4 4 85 ASP ASN ALA THR SER GLY GLY SER ASN GLU GLY SER THR SEQRES 5 4 85 ASP THR THR SER THR HIS THR THR ASN THR GLN ASN ASN SEQRES 6 4 85 ASP TRP PHE SER LYS LEU ALA SER SER ALA PHE SER GLY SEQRES 7 4 85 LEU PHE GLY ALA LEU LEU ALA SEQRES 1 A 594 PHE ASN LEU ASP VAL ASP SER PRO ALA GLU TYR SER GLY SEQRES 2 A 594 PRO GLU GLY SER TYR PHE GLY PHE ALA VAL ASP PHE PHE SEQRES 3 A 594 VAL PRO SER ALA SER SER ARG MET PHE LEU LEU VAL GLY SEQRES 4 A 594 ALA PRO LYS ALA ASN THR THR GLN PRO GLY ILE VAL GLU SEQRES 5 A 594 GLY GLY GLN VAL LEU LYS CYS ASP TRP SER SER THR ARG SEQRES 6 A 594 ARG CYS GLN PRO ILE GLU PHE ASP ALA THR GLY ASN ARG SEQRES 7 A 594 ASP TYR ALA LYS ASP ASP PRO LEU GLU PHE LYS SER HIS SEQRES 8 A 594 GLN TRP PHE GLY ALA SER VAL ARG SER LYS GLN ASP LYS SEQRES 9 A 594 ILE LEU ALA CYS ALA PRO LEU TYR HIS TRP ARG THR GLU SEQRES 10 A 594 MET LYS GLN GLU ARG GLU PRO VAL GLY THR CYS PHE LEU SEQRES 11 A 594 GLN ASP GLY THR LYS THR VAL GLU TYR ALA PRO CYS ARG SEQRES 12 A 594 SER GLN ASP ILE ASP ALA ASP GLY GLN GLY PHE CYS GLN SEQRES 13 A 594 GLY GLY PHE SER ILE ASP PHE THR LYS ALA ASP ARG VAL SEQRES 14 A 594 LEU LEU GLY GLY PRO GLY SER PHE TYR TRP GLN GLY GLN SEQRES 15 A 594 LEU ILE SER ASP GLN VAL ALA GLU ILE VAL SER LYS TYR SEQRES 16 A 594 ASP PRO ASN VAL TYR SER ILE LYS TYR ASN ASN GLN LEU SEQRES 17 A 594 ALA THR ARG THR ALA GLN ALA ILE PHE ASP ASP SER TYR SEQRES 18 A 594 LEU GLY TYR SER VAL ALA VAL GLY ASP PHE ASN GLY ASP SEQRES 19 A 594 GLY ILE ASP ASP PHE VAL SER GLY VAL PRO ARG ALA ALA SEQRES 20 A 594 ARG THR LEU GLY MET VAL TYR ILE TYR ASP GLY LYS ASN SEQRES 21 A 594 MET SER SER LEU TYR ASN PHE THR GLY GLU GLN MET ALA SEQRES 22 A 594 ALA TYR PHE GLY PHE SER VAL ALA ALA THR ASP ILE ASN SEQRES 23 A 594 GLY ASP ASP TYR ALA ASP VAL PHE ILE GLY ALA PRO LEU SEQRES 24 A 594 PHE MET ASP ARG GLY SER ASP GLY LYS LEU GLN GLU VAL SEQRES 25 A 594 GLY GLN VAL SER VAL SER LEU GLN ARG ALA SER GLY ASP SEQRES 26 A 594 PHE GLN THR THR LYS LEU ASN GLY PHE GLU VAL PHE ALA SEQRES 27 A 594 ARG PHE GLY SER ALA ILE ALA PRO LEU GLY ASP LEU ASP SEQRES 28 A 594 GLN ASP GLY PHE ASN ASP ILE ALA ILE ALA ALA PRO TYR SEQRES 29 A 594 GLY GLY GLU ASP LYS LYS GLY ILE VAL TYR ILE PHE ASN SEQRES 30 A 594 GLY ARG SER THR GLY LEU ASN ALA VAL PRO SER GLN ILE SEQRES 31 A 594 LEU GLU GLY GLN TRP ALA ALA ARG SER CYS PRO PRO SER SEQRES 32 A 594 PHE GLY TYR SER MET LYS GLY ALA THR ASP ILE ASP LYS SEQRES 33 A 594 ASN GLY TYR PRO ASP LEU ILE VAL GLY ALA PHE GLY VAL SEQRES 34 A 594 ASP ARG ALA ILE LEU TYR ARG ALA ARG PRO VAL ILE THR SEQRES 35 A 594 VAL ASN ALA GLY LEU GLU VAL TYR PRO SER ILE LEU ASN SEQRES 36 A 594 GLN ASP ASN LYS THR CYS SER LEU PRO GLY THR ALA LEU SEQRES 37 A 594 LYS VAL SER CYS PHE ASN VAL ARG PHE CYS LEU LYS ALA SEQRES 38 A 594 ASP GLY LYS GLY VAL LEU PRO ARG LYS LEU ASN PHE GLN SEQRES 39 A 594 VAL GLU LEU LEU LEU ASP LYS LEU LYS GLN LYS GLY ALA SEQRES 40 A 594 ILE ARG ARG ALA LEU PHE LEU TYR SER ARG SER PRO SER SEQRES 41 A 594 HIS SER LYS ASN MET THR ILE SER ARG GLY GLY LEU MET SEQRES 42 A 594 GLN CYS GLU GLU LEU ILE ALA TYR LEU ARG ASP GLU SER SEQRES 43 A 594 GLU PHE ARG ASP LYS LEU THR PRO ILE THR ILE PHE MET SEQRES 44 A 594 GLU TYR ARG LEU ASP TYR ARG THR ALA ALA ASP THR THR SEQRES 45 A 594 GLY LEU GLN PRO ILE LEU ASN GLN PHE THR PRO ALA ASN SEQRES 46 A 594 ILE SER ARG GLN ALA HIS ILE LEU LEU SEQRES 1 B 470 GLY CYS ALA LEU GLY GLY ALA GLU THR CYS GLU ASP CYS SEQRES 2 B 470 LEU LEU ILE GLY PRO GLN CYS ALA TRP CYS ALA GLN GLU SEQRES 3 B 470 ASN PHE THR HIS PRO SER GLY VAL GLY GLU ARG CYS ASP SEQRES 4 B 470 THR PRO ALA ASN LEU LEU ALA LYS GLY CYS GLN LEU ASN SEQRES 5 B 470 PHE ILE GLU ASN PRO VAL SER GLN VAL GLU ILE LEU LYS SEQRES 6 B 470 ASN LYS PRO LEU SER VAL GLY ARG GLN LYS ASN SER SER SEQRES 7 B 470 ASP ILE VAL GLN ILE ALA PRO GLN SER LEU ILE LEU LYS SEQRES 8 B 470 LEU ARG PRO GLY GLY ALA GLN THR LEU GLN VAL HIS VAL SEQRES 9 B 470 ARG GLN THR GLU ASP TYR PRO VAL ASP LEU TYR TYR LEU SEQRES 10 B 470 MET ASP LEU SER ALA SER MET ASP ASP ASP LEU ASN THR SEQRES 11 B 470 ILE LYS GLU LEU GLY SER ARG LEU SER LYS GLU MET SER SEQRES 12 B 470 LYS LEU THR SER ASN PHE ARG LEU GLY PHE GLY SER PHE SEQRES 13 B 470 VAL GLU LYS PRO VAL SER PRO PHE VAL LYS THR THR PRO SEQRES 14 B 470 GLU GLU ILE ALA ASN PRO CYS SER SER ILE PRO TYR PHE SEQRES 15 B 470 CYS LEU PRO THR PHE GLY PHE LYS HIS ILE LEU PRO LEU SEQRES 16 B 470 THR ASN ASP ALA GLU ARG PHE ASN GLU ILE VAL LYS ASN SEQRES 17 B 470 GLN LYS ILE SER ALA ASN ILE ASP THR PRO GLU GLY GLY SEQRES 18 B 470 PHE ASP ALA ILE MET GLN ALA ALA VAL CYS LYS GLU LYS SEQRES 19 B 470 ILE GLY TRP ARG ASN ASP SER LEU HIS LEU LEU VAL PHE SEQRES 20 B 470 VAL SER ASP ALA ASP SER HIS PHE GLY MET ASP SER LYS SEQRES 21 B 470 LEU ALA GLY ILE VAL CYS PRO ASN ASP GLY LEU CYS HIS SEQRES 22 B 470 LEU ASP SER LYS ASN GLU TYR SER MET SER THR VAL LEU SEQRES 23 B 470 GLU TYR PRO THR ILE GLY GLN LEU ILE ASP LYS LEU VAL SEQRES 24 B 470 GLN ASN ASN VAL LEU LEU ILE PHE ALA VAL THR GLN GLU SEQRES 25 B 470 GLN VAL HIS LEU TYR GLU ASN TYR ALA LYS LEU ILE PRO SEQRES 26 B 470 GLY ALA THR VAL GLY LEU LEU GLN LYS ASP SER GLY ASN SEQRES 27 B 470 ILE LEU GLN LEU ILE ILE SER ALA TYR GLU GLU LEU ARG SEQRES 28 B 470 SER GLU VAL GLU LEU GLU VAL LEU GLY ASP THR GLU GLY SEQRES 29 B 470 LEU ASN LEU SER PHE THR ALA ILE CYS ASN ASN GLY THR SEQRES 30 B 470 LEU PHE GLN HIS GLN LYS LYS CYS SER HIS MET LYS VAL SEQRES 31 B 470 GLY ASP THR ALA SER PHE SER VAL THR VAL ASN ILE PRO SEQRES 32 B 470 HIS CYS GLU ARG ARG SER ARG HIS ILE ILE ILE LYS PRO SEQRES 33 B 470 VAL GLY LEU GLY ASP ALA LEU GLU LEU LEU VAL SER PRO SEQRES 34 B 470 GLU CYS ASN CYS ASP CYS GLN LYS GLU VAL GLU VAL ASN SEQRES 35 B 470 SER SER LYS CYS HIS ASN GLY ASN GLY SER PHE GLN CYS SEQRES 36 B 470 GLY VAL CYS ALA CYS HIS PRO GLY HIS MET GLY PRO ARG SEQRES 37 B 470 CYS GLU HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 12 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN E 1 11 HET MAN E 2 11 HET NAG F 1 14 HET NAG F 2 14 HET MAN F 3 11 HET MAN F 4 11 HET NAG G 1 14 HET NAG G 2 14 HET MAN G 3 12 HET MAN G 4 12 HET MAN 3 301 11 HET MAN 3 302 11 HET MAN A 607 11 HET NAG A 614 14 HET CA A 619 1 HET CA A 620 1 HET CA A 621 1 HET CA A 622 1 HET NAG B 501 14 HET NAG B 502 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION FORMUL 7 NAG 11(C8 H15 N O6) FORMUL 7 MAN 11(C6 H12 O6) FORMUL 16 CA 4(CA 2+) HELIX 1 AA1 THR 1 14 GLY 1 19 5 6 HELIX 2 AA2 ASP 1 52 THR 1 56 5 5 HELIX 3 AA3 THR 1 60 LEU 1 65 1 6 HELIX 4 AA4 PRO 1 94 ASP 1 99 5 6 HELIX 5 AA5 LEU 1 148 GLN 1 153 1 6 HELIX 6 AA6 LYS 1 154 ARG 1 157 5 4 HELIX 7 AA7 ALA 2 56 GLU 2 59 5 4 HELIX 8 AA8 GLY 2 89 ASP 2 96 1 8 HELIX 9 AA9 ARG 2 135 PHE 2 143 5 9 HELIX 10 AB1 ASN 3 43 CYS 3 51 1 9 HELIX 11 AB2 PHE 3 90 ALA 3 95 1 6 HELIX 12 AB3 GLU 3 137 CYS 3 142 5 6 HELIX 13 AB4 TRP 4 67 SER 4 74 1 8 HELIX 14 AB5 GLY A 175 GLN A 180 1 6 HELIX 15 AB6 VAL A 188 LYS A 194 1 7 HELIX 16 AB7 GLN A 214 ASP A 218 5 5 HELIX 17 AB8 ARG A 245 LEU A 250 1 6 HELIX 18 AB9 GLY A 366 LYS A 370 5 5 HELIX 19 AC1 PHE A 427 VAL A 429 5 3 HELIX 20 AC2 ASP A 544 PHE A 548 5 5 HELIX 21 AC3 ASP A 564 ALA A 569 1 6 HELIX 22 AC4 CYS B 14 ILE B 20 1 7 HELIX 23 AC5 ASN B 77 ILE B 81 5 5 HELIX 24 AC6 ASP B 127 THR B 131 5 5 HELIX 25 AC7 LEU B 135 LYS B 145 1 11 HELIX 26 AC8 THR B 169 ASN B 175 1 7 HELIX 27 AC9 ASP B 199 GLN B 210 1 12 HELIX 28 AD1 GLY B 221 CYS B 232 1 12 HELIX 29 AD2 CYS B 232 GLY B 237 1 6 HELIX 30 AD3 PHE B 256 GLY B 264 5 9 HELIX 31 AD4 TYR B 281 VAL B 286 5 6 HELIX 32 AD5 THR B 291 ASN B 302 1 12 HELIX 33 AD6 GLN B 314 ILE B 325 1 12 HELIX 34 AD7 ASN B 339 LEU B 351 1 13 HELIX 35 AD8 CYS B 434 LYS B 438 5 5 SHEET 1 AA1 5 THR 1 2 SER 1 3 0 SHEET 2 AA1 5 LYS 3 154 ILE 3 159 -1 O LYS 3 154 N SER 1 3 SHEET 3 AA1 5 ILE 3 105 PHE 3 111 -1 N PHE 3 109 O PHE 3 155 SHEET 4 AA1 5 ALA 3 198 ALA 3 205 -1 O LEU 3 202 N HIS 3 108 SHEET 5 AA1 5 THR 3 53 PHE 3 54 -1 N THR 3 53 O ALA 3 203 SHEET 1 AA2 5 THR 1 2 SER 1 3 0 SHEET 2 AA2 5 LYS 3 154 ILE 3 159 -1 O LYS 3 154 N SER 1 3 SHEET 3 AA2 5 ILE 3 105 PHE 3 111 -1 N PHE 3 109 O PHE 3 155 SHEET 4 AA2 5 ALA 3 198 ALA 3 205 -1 O LEU 3 202 N HIS 3 108 SHEET 5 AA2 5 TYR 3 63 THR 3 65 -1 N VAL 3 64 O LEU 3 199 SHEET 1 AA3 4 VAL 1 40 VAL 1 42 0 SHEET 2 AA3 4 ARG 1 172 PRO 1 188 -1 O TYR 1 178 N VAL 1 40 SHEET 3 AA3 4 ALA 1 69 GLU 1 83 -1 N PHE 1 73 O GLU 1 184 SHEET 4 AA3 4 LEU 1 126 ALA 1 127 -1 O LEU 1 126 N TYR 1 72 SHEET 1 AA4 4 THR 1 113 ALA 1 116 0 SHEET 2 AA4 4 ALA 1 69 GLU 1 83 -1 N VAL 1 80 O THR 1 113 SHEET 3 AA4 4 ARG 1 172 PRO 1 188 -1 O GLU 1 184 N PHE 1 73 SHEET 4 AA4 4 ARG 3 40 PHE 3 41 -1 O PHE 3 41 N THR 1 185 SHEET 1 AA5 4 ILE 1 48 VAL 1 50 0 SHEET 2 AA5 4 ALA 1 167 LYS 1 169 -1 O ILE 1 168 N ASN 1 49 SHEET 3 AA5 4 LEU 1 86 VAL 1 89 -1 N THR 1 87 O LYS 1 169 SHEET 4 AA5 4 THR 1 105 ALA 1 106 -1 O ALA 1 106 N LEU 1 86 SHEET 1 AA6 2 THR 2 16 ASN 2 19 0 SHEET 2 AA6 2 THR 2 22 THR 2 25 -1 O SER 2 24 N THR 2 17 SHEET 1 AA7 5 VAL 2 32 TYR 2 34 0 SHEET 2 AA7 5 THR 2 155 VAL 2 160 1 O THR 2 159 N THR 2 33 SHEET 3 AA7 5 TYR 2 98 ALA 2 111 -1 N TRP 2 105 O VAL 2 160 SHEET 4 AA7 5 PRO 2 205 GLU 2 213 -1 O GLY 2 212 N ALA 2 99 SHEET 5 AA7 5 GLU 2 52 ARG 2 54 -1 N THR 2 53 O VAL 2 210 SHEET 1 AA8 5 VAL 2 32 TYR 2 34 0 SHEET 2 AA8 5 THR 2 155 VAL 2 160 1 O THR 2 159 N THR 2 33 SHEET 3 AA8 5 TYR 2 98 ALA 2 111 -1 N TRP 2 105 O VAL 2 160 SHEET 4 AA8 5 ILE 2 197 ILE 2 203 -1 O TYR 2 200 N THR 2 110 SHEET 5 AA8 5 PHE 2 62 TRP 2 69 -1 N PHE 2 67 O VAL 2 199 SHEET 1 AA9 4 HIS 2 79 LEU 2 83 0 SHEET 2 AA9 4 TRP 2 177 ALA 2 185 -1 O LEU 2 179 N LEU 2 81 SHEET 3 AA9 4 CYS 2 120 PRO 2 127 -1 N ALA 2 124 O VAL 2 180 SHEET 4 AA9 4 HIS 2 145 ILE 2 148 -1 O ILE 2 148 N LEU 2 121 SHEET 1 AB1 4 VAL 3 73 ASP 3 78 0 SHEET 2 AB1 4 TRP 3 183 GLY 3 192 -1 O LEU 3 186 N ALA 3 75 SHEET 3 AB1 4 LYS 3 118 ALA 3 126 -1 N LYS 3 118 O GLY 3 192 SHEET 4 AB1 4 ALA 3 145 ASP 3 148 -1 O TRP 3 147 N TYR 3 121 SHEET 1 AB2 3 THR 3 168 TYR 3 169 0 SHEET 2 AB2 3 TYR 3 98 SER 3 102 -1 N TYR 3 101 O THR 3 168 SHEET 3 AB2 3 GLU 3 210 PRO 3 214 -1 O GLU 3 210 N SER 3 102 SHEET 1 AB3 4 ALA A 9 SER A 12 0 SHEET 2 AB3 4 ARG A 431 TYR A 435 -1 O LEU A 434 N ALA A 9 SHEET 3 AB3 4 ASP A 421 ALA A 426 -1 N VAL A 424 O ILE A 433 SHEET 4 AB3 4 SER A 407 THR A 412 -1 N LYS A 409 O ILE A 423 SHEET 1 AB4 4 VAL A 23 PHE A 26 0 SHEET 2 AB4 4 PHE A 35 ALA A 40 -1 O LEU A 37 N ASP A 24 SHEET 3 AB4 4 GLN A 55 ASP A 60 -1 O CYS A 59 N LEU A 36 SHEET 4 AB4 4 CYS A 67 ILE A 70 -1 O GLN A 68 N LYS A 58 SHEET 1 AB5 2 ASP A 79 ALA A 81 0 SHEET 2 AB5 2 ASP A 84 PRO A 85 -1 O ASP A 84 N TYR A 80 SHEET 1 AB6 2 GLU A 87 PHE A 88 0 SHEET 2 AB6 2 HIS A 113 TRP A 114 -1 O HIS A 113 N PHE A 88 SHEET 1 AB7 4 VAL A 98 LYS A 101 0 SHEET 2 AB7 4 LYS A 104 ALA A 109 -1 O LEU A 106 N ARG A 99 SHEET 3 AB7 4 THR A 127 ASP A 132 -1 O THR A 127 N ALA A 109 SHEET 4 AB7 4 LYS A 135 TYR A 139 -1 O VAL A 137 N LEU A 130 SHEET 1 AB8 4 ILE A 161 PHE A 163 0 SHEET 2 AB8 4 ARG A 168 GLY A 173 -1 O LEU A 170 N ASP A 162 SHEET 3 AB8 4 GLN A 182 GLN A 187 -1 O ASP A 186 N VAL A 169 SHEET 4 AB8 4 GLN A 207 ALA A 209 -1 O LEU A 208 N SER A 185 SHEET 1 AB9 4 VAL A 226 GLY A 229 0 SHEET 2 AB9 4 ASP A 238 VAL A 243 -1 O ASP A 238 N GLY A 229 SHEET 3 AB9 4 MET A 252 TYR A 256 -1 O MET A 252 N VAL A 243 SHEET 4 AB9 4 ASN A 266 THR A 268 -1 O PHE A 267 N VAL A 253 SHEET 1 AC1 4 VAL A 280 THR A 283 0 SHEET 2 AC1 4 ASP A 292 ALA A 297 -1 O PHE A 294 N ALA A 281 SHEET 3 AC1 4 GLN A 314 GLN A 320 -1 O SER A 318 N VAL A 293 SHEET 4 AC1 4 PHE A 326 ASN A 332 -1 O THR A 329 N VAL A 317 SHEET 1 AC2 2 MET A 301 ARG A 303 0 SHEET 2 AC2 2 LEU A 309 GLU A 311 -1 O GLN A 310 N ASP A 302 SHEET 1 AC3 4 ILE A 344 GLY A 348 0 SHEET 2 AC3 4 ASP A 357 ALA A 362 -1 O ASP A 357 N GLY A 348 SHEET 3 AC3 4 ILE A 372 ASN A 377 -1 O TYR A 374 N ILE A 360 SHEET 4 AC3 4 GLN A 389 GLU A 392 -1 O LEU A 391 N VAL A 373 SHEET 1 AC4 3 ALA A 481 ASP A 482 0 SHEET 2 AC4 3 VAL A 440 VAL A 443 -1 N THR A 442 O ASP A 482 SHEET 3 AC4 3 ILE A 577 LEU A 578 1 O ILE A 577 N ILE A 441 SHEET 1 AC5 4 GLY A 446 TYR A 450 0 SHEET 2 AC5 4 CYS A 472 LEU A 479 -1 O ARG A 476 N GLU A 448 SHEET 3 AC5 4 GLN A 534 LEU A 542 -1 O ALA A 540 N PHE A 473 SHEET 4 AC5 4 ALA A 511 PHE A 513 -1 N LEU A 512 O TYR A 541 SHEET 1 AC6 5 ILE A 453 LEU A 454 0 SHEET 2 AC6 5 ASN A 585 ILE A 592 1 O HIS A 591 N LEU A 454 SHEET 3 AC6 5 ILE A 555 LEU A 563 -1 N ILE A 557 O ARG A 588 SHEET 4 AC6 5 LYS A 490 LEU A 499 -1 N GLU A 496 O GLU A 560 SHEET 5 AC6 5 SER A 520 SER A 528 -1 O MET A 525 N PHE A 493 SHEET 1 AC7 3 CYS B 39 ASP B 40 0 SHEET 2 AC7 3 ALA B 25 CYS B 27 -1 N ALA B 25 O ASP B 40 SHEET 3 AC7 3 ILE B 55 GLU B 56 -1 O GLU B 56 N TRP B 26 SHEET 1 AC8 6 GLN B 61 LYS B 66 0 SHEET 2 AC8 6 SER B 88 LEU B 93 -1 O ILE B 90 N GLU B 63 SHEET 3 AC8 6 LEU B 424 PRO B 430 1 O LEU B 427 N LEU B 91 SHEET 4 AC8 6 ARG B 411 PRO B 417 -1 N ILE B 415 O LEU B 424 SHEET 5 AC8 6 VAL B 355 LEU B 360 -1 N LEU B 360 O ILE B 414 SHEET 6 AC8 6 LYS B 385 CYS B 386 -1 O CYS B 386 N VAL B 355 SHEET 1 AC9 5 ILE B 84 ALA B 85 0 SHEET 2 AC9 5 GLN B 99 ARG B 106 -1 O HIS B 104 N ALA B 85 SHEET 3 AC9 5 THR B 394 ASN B 402 -1 O VAL B 399 N LEU B 101 SHEET 4 AC9 5 ASN B 367 ILE B 373 -1 N ASN B 367 O ASN B 402 SHEET 5 AC9 5 LEU B 379 GLN B 381 -1 O PHE B 380 N ALA B 372 SHEET 1 AD1 6 PHE B 190 THR B 197 0 SHEET 2 AD1 6 PHE B 150 PHE B 157 -1 N PHE B 154 O LEU B 194 SHEET 3 AD1 6 VAL B 113 ASP B 120 1 N LEU B 115 O GLY B 153 SHEET 4 AD1 6 LEU B 243 SER B 250 1 O LEU B 245 N ASP B 114 SHEET 5 AD1 6 LEU B 305 THR B 311 1 O LEU B 305 N HIS B 244 SHEET 6 AD1 6 THR B 329 LEU B 333 1 O LEU B 333 N VAL B 310 SHEET 1 AD2 2 GLY B 452 GLN B 455 0 SHEET 2 AD2 2 VAL B 458 CYS B 461 -1 O ALA B 460 N SER B 453 SSBOND 1 CYS A 59 CYS A 67 1555 1555 2.03 SSBOND 2 CYS A 108 CYS A 128 1555 1555 2.03 SSBOND 3 CYS A 142 CYS A 155 1555 1555 2.03 SSBOND 4 CYS A 400 CYS B 267 1555 1555 2.03 SSBOND 5 CYS A 461 CYS A 472 1555 1555 2.03 SSBOND 6 CYS A 478 CYS A 535 1555 1555 2.03 SSBOND 7 CYS B 6 CYS B 24 1555 1555 2.03 SSBOND 8 CYS B 14 CYS B 434 1555 1555 2.03 SSBOND 9 CYS B 17 CYS B 39 1555 1555 2.03 SSBOND 10 CYS B 27 CYS B 50 1555 1555 2.03 SSBOND 11 CYS B 177 CYS B 184 1555 1555 2.03 SSBOND 12 CYS B 232 CYS B 273 1555 1555 2.03 SSBOND 13 CYS B 374 CYS B 386 1555 1555 2.03 SSBOND 14 CYS B 406 CYS B 432 1555 1555 2.03 SSBOND 15 CYS B 436 CYS B 456 1555 1555 2.03 SSBOND 16 CYS B 447 CYS B 459 1555 1555 2.03 SSBOND 17 CYS B 461 CYS B 470 1555 1555 2.03 LINK ND2 ASN A 458 C1 NAG F 1 1555 1555 1.29 LINK ND2 ASN B 77 C1 NAG B 501 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.36 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.38 LINK O2 MAN E 1 C1 MAN E 2 1555 1555 1.30 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.33 LINK O4 NAG F 2 C1 MAN F 3 1555 1555 1.44 LINK O3 MAN F 3 C1 MAN F 4 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 MAN G 3 1555 1555 1.45 LINK O4 MAN G 3 C1 MAN G 4 1555 1555 1.45 LINK OD1 ASP A 230 CA CA A 621 1555 1555 2.50 LINK OD1 ASN A 232 CA CA A 621 1555 1555 2.38 LINK OD1 ASP A 234 CA CA A 621 1555 1555 2.41 LINK O ILE A 236 CA CA A 621 1555 1555 2.46 LINK OD1 ASP A 238 CA CA A 621 1555 1555 2.36 LINK OD2 ASP A 238 CA CA A 621 1555 1555 2.47 LINK OD1 ASP A 284 CA CA A 622 1555 1555 2.43 LINK OD1 ASN A 286 CA CA A 622 1555 1555 2.35 LINK OD1 ASP A 288 CA CA A 622 1555 1555 2.36 LINK O TYR A 290 CA CA A 622 1555 1555 2.32 LINK OD1 ASP A 292 CA CA A 622 1555 1555 2.36 LINK OD2 ASP A 292 CA CA A 622 1555 1555 2.44 LINK OD1 ASP A 349 CA CA A 620 1555 1555 2.42 LINK OD1 ASP A 351 CA CA A 620 1555 1555 2.32 LINK OD1 ASP A 353 CA CA A 620 1555 1555 2.31 LINK O PHE A 355 CA CA A 620 1555 1555 2.21 LINK OD1 ASP A 357 CA CA A 620 1555 1555 2.37 LINK OD2 ASP A 357 CA CA A 620 1555 1555 2.40 LINK OD1 ASP A 415 CA CA A 619 1555 1555 2.32 LINK OD2 ASP A 415 CA CA A 619 1555 1555 2.91 LINK OD1 ASN A 417 CA CA A 619 1555 1555 2.37 LINK O TYR A 419 CA CA A 619 1555 1555 2.43 LINK OD1 ASP A 421 CA CA A 619 1555 1555 2.35 CISPEP 1 ALA 1 110 PRO 1 111 0 -5.74 CISPEP 2 LEU 2 83 PRO 2 84 0 2.95 CISPEP 3 TYR A 450 PRO A 451 0 -2.43 CISPEP 4 ALA B 85 PRO B 86 0 -1.84 CISPEP 5 SER B 163 PRO B 164 0 5.63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000